0.015923 0.009193 0.000000 0.000000 0.018387 0.000000 0.000000 0.000000 0.011976 0.00000 0.00000 0.00000 Ala, P. Chang, C.H. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 62.800 62.800 83.500 C49 H44 N8 O5 824.924 [4R-(4ALPHA,5ALPHA,6ALPHA,7ALPHA)]-3,3'-{{TETRAHYDRO-5,6-DIHYDROXY-2-OXO-4,7-BIS(PHENYLMETHYL)-1H-1,3-DIAZEPINE-1,3(2H)-DIYL]BIS(METHYLENE)]BIS[N-1H-BENZIMIDAZOL-2-YLBENZAMIDE] SD146 non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N C N 3 R C N 4 S C N 5 S C N 6 R C N 7 N C Y 8 N C Y 9 N C Y 10 N C Y 11 N C Y 12 N C Y 13 N C N 14 N C Y 15 N C Y 16 N C Y 17 N C Y 18 N C Y 19 N C Y 20 N C Y 21 N C N 22 N C Y 23 N C Y 24 N C Y 25 N C Y 26 N C Y 27 N C Y 28 N C N 29 N C Y 30 N C Y 31 N C Y 32 N C Y 33 N C Y 34 N C Y 35 N C Y 36 N C Y 37 N C Y 38 N C Y 39 N C Y 40 N C Y 41 N C N 42 N C Y 43 N C Y 44 N C Y 45 N C Y 46 N C Y 47 N C Y 48 N C Y 49 N C N 50 N N N 51 N N N 52 N N Y 53 N N Y 54 N N N 55 N N Y 56 N N Y 57 N N N 58 N O N 59 N O N 60 N O N 61 N O N 62 N O N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 S C N 109 N C N 110 N O N 111 N C N 112 N O N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N N N 121 S C N 122 N C N 123 N O N 124 N C N 125 N C N 126 N C N 127 N N N 128 N C N 129 N N N 130 N N N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N N N 148 S C N 149 N C N 150 N O N 151 N C N 152 N C N 153 N O N 154 N N N 155 N O N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N N N 165 S C N 166 N C N 167 N O N 168 N C N 169 N C N 170 N O N 171 N O N 172 N O N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N N N 181 R C N 182 N C N 183 N O N 184 N C N 185 N S N 186 N O N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N N N 195 S C N 196 N C N 197 N O N 198 N C N 199 N C N 200 N C N 201 N O N 202 N N N 203 N O N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N N N 215 S C N 216 N C N 217 N O N 218 N C N 219 N C N 220 N C N 221 N O N 222 N O N 223 N O N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N N N 234 N C N 235 N C N 236 N O N 237 N O N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N N N 244 S C N 245 N C N 246 N O N 247 N C Y 248 N C Y 249 N N Y 250 N C Y 251 N C Y 252 N N N 253 N O N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N O N 265 N H N 266 N H N 267 N N N 268 S C N 269 N C N 270 N O N 271 S C N 272 N C N 273 N C N 274 N C N 275 N O N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N N N 290 S C N 291 N C N 292 N O N 293 N C N 294 N C N 295 N C N 296 N C N 297 N O N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N N N 312 S C N 313 N C N 314 N O N 315 N C N 316 N C N 317 N C N 318 N C N 319 N N N 320 N O N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N H N 333 N H N 334 N H N 335 N H N 336 N N N 337 S C N 338 N C N 339 N O N 340 N C N 341 N C N 342 N S N 343 N C N 344 N O N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N N N 357 S C N 358 N C N 359 N O N 360 N C Y 361 N C Y 362 N C Y 363 N C Y 364 N C Y 365 N C Y 366 N C N 367 N O N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N N N 380 S C N 381 N C N 382 N O N 383 N C N 384 N C N 385 N C N 386 N O N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N N N 397 S C N 398 N C N 399 N O N 400 N C N 401 N O N 402 N O N 403 N H N 404 N H N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N N N 411 S C N 412 N C N 413 N O N 414 R C N 415 N O N 416 N C N 417 N O N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N N N 428 S C N 429 N C N 430 N O N 431 N C Y 432 N C Y 433 N C Y 434 N C Y 435 N N Y 436 N C Y 437 N C Y 438 N C Y 439 N C Y 440 N C N 441 N O N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N N N 455 S C N 456 N C N 457 N O N 458 N C Y 459 N C Y 460 N C Y 461 N C Y 462 N C Y 463 N C Y 464 N C N 465 N O N 466 N O N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N H N 477 N H N 478 N N N 479 S C N 480 N C N 481 N O N 482 N C N 483 N C N 484 N C N 485 N O N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 495 N H N 496 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing Y 25 N doub Y 26 N sing Y 27 N sing N 28 N sing Y 29 N doub N 30 N sing Y 31 N sing N 32 N sing Y 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N doub N 38 N sing Y 39 N sing Y 40 N doub Y 41 N sing Y 42 N doub N 43 N sing Y 44 N doub N 45 N sing Y 46 N sing N 47 N sing Y 48 N doub N 49 N sing Y 50 N sing Y 51 N sing Y 52 N sing N 53 N sing N 54 N sing N 55 N sing Y 56 N doub Y 57 N sing Y 58 N sing N 59 N sing Y 60 N doub N 61 N sing Y 62 N sing N 63 N sing Y 64 N doub N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing Y 70 N doub Y 71 N sing Y 72 N sing N 73 N sing Y 74 N doub N 75 N sing Y 76 N sing N 77 N sing Y 78 N doub N 79 N sing N 80 N sing Y 81 N doub Y 82 N sing Y 83 N sing N 84 N sing Y 85 N doub N 86 N sing Y 87 N sing N 88 N sing Y 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N doub N 94 N sing Y 95 N doub Y 96 N sing Y 97 N doub Y 98 N sing N 99 N sing Y 100 N sing N 101 N sing Y 102 N doub N 103 N sing Y 104 N sing N 105 N sing Y 106 N doub Y 107 N sing Y 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N doub N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N doub N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N doub N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N doub N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N doub N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N doub N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N doub N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N doub N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N doub N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N doub N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N doub N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N doub N 250 N sing N 251 N sing N 252 N sing N 253 N sing Y 254 N sing Y 255 N doub Y 256 N doub N 257 N sing Y 258 N sing N 259 N sing Y 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N doub N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N doub N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N doub N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N doub N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N doub N 358 N sing N 359 N sing N 360 N sing N 361 N sing Y 362 N doub Y 363 N sing Y 364 N sing N 365 N sing Y 366 N doub N 367 N sing Y 368 N doub N 369 N sing Y 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N doub N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N doub N 398 N sing N 399 N sing N 400 N sing N 401 N sing N 402 N sing N 403 N sing N 404 N sing N 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N doub N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N doub N 427 N sing N 428 N sing N 429 N sing N 430 N sing Y 431 N doub Y 432 N sing Y 433 N sing N 434 N sing Y 435 N doub Y 436 N sing Y 437 N sing N 438 N sing Y 439 N sing Y 440 N doub N 441 N sing Y 442 N doub N 443 N sing Y 444 N sing N 445 N sing N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N doub N 455 N sing N 456 N sing N 457 N sing N 458 N sing Y 459 N doub Y 460 N sing Y 461 N sing N 462 N sing Y 463 N doub N 464 N sing Y 465 N doub N 466 N sing Y 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N sing N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N doub N 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N sing US Biochemistry BICHAW 0033 0006-2960 37 15042 15049 10.1021/bi980386e 9790666 Counteracting HIV-1 protease drug resistance: structural analysis of mutant proteases complexed with XV638 and SD146, cyclic urea amides with broad specificities. 1998 10.2210/pdb1bwb/pdb pdb_00001bwb 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 278 1 SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE 10823.746 PROTEIN (HIV-1 PROTEASE) 3.4.23.16 V82F, I84V 2 man polymer 824.924 [4R-(4ALPHA,5ALPHA,6ALPHA,7ALPHA)]-3,3'-{{TETRAHYDRO-5,6-DIHYDROXY-2-OXO-4,7-BIS(PHENYLMETHYL)-1H-1,3-DIAZEPINE-1,3(2H)-DIYL]BIS(METHYLENE)]BIS[N-1H-BENZIMIDAZOL-2-YLBENZAMIDE] 1 syn non-polymer 18.015 water 70 nat water no no PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PFNVIGRNLLTQIGCTLNF PQVTLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPT PFNVIGRNLLTQIGCTLNF A,B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Lentivirus BH102 Escherichia sample 11676 Human immunodeficiency virus 1 562 Escherichia coli 2.19 43.95 6.5 pH 6.5 struct_conf struct_conf_type database_2 struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond repository Initial release Version format compliance Derived calculations Version format compliance Derived calculations Database references Derived calculations Data collection 1 0 1998-09-30 1 1 2007-10-21 1 2 2011-07-13 1 3 2017-11-29 1 4 2021-11-03 1 5 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id BNL Y RCSB 1998-09-22 REL 146 [4R-(4ALPHA,5ALPHA,6ALPHA,7ALPHA)]-3,3'-{{TETRAHYDRO-5,6-DIHYDROXY-2-OXO-4,7-BIS(PHENYLMETHYL)-1H-1,3-DIAZEPINE-1,3(2H)-DIYL]BIS(METHYLENE)]BIS[N-1H-BENZIMIDAZOL-2-YLBENZAMIDE] HOH water SD1 641 2 146 146 641 B HOH 402 3 HOH HOH 402 A HOH 404 3 HOH HOH 404 A HOH 406 3 HOH HOH 406 A HOH 407 3 HOH HOH 407 A HOH 411 3 HOH HOH 411 A HOH 413 3 HOH HOH 413 A HOH 414 3 HOH HOH 414 A HOH 415 3 HOH HOH 415 A HOH 417 3 HOH HOH 417 A HOH 418 3 HOH HOH 418 A HOH 419 3 HOH HOH 419 A HOH 427 3 HOH HOH 427 A HOH 428 3 HOH HOH 428 A HOH 429 3 HOH HOH 429 A HOH 430 3 HOH HOH 430 A HOH 434 3 HOH HOH 434 A HOH 436 3 HOH HOH 436 A HOH 438 3 HOH HOH 438 A HOH 439 3 HOH HOH 439 A HOH 445 3 HOH HOH 445 A HOH 446 3 HOH HOH 446 A HOH 447 3 HOH HOH 447 A HOH 448 3 HOH HOH 448 A HOH 452 3 HOH HOH 452 A HOH 453 3 HOH HOH 453 A HOH 454 3 HOH HOH 454 A HOH 455 3 HOH HOH 455 A HOH 456 3 HOH HOH 456 A HOH 458 3 HOH HOH 458 A HOH 460 3 HOH HOH 460 A HOH 461 3 HOH HOH 461 A HOH 463 3 HOH HOH 463 A HOH 464 3 HOH HOH 464 A HOH 467 3 HOH HOH 467 A HOH 468 3 HOH HOH 468 A HOH 469 3 HOH HOH 469 A HOH 470 3 HOH HOH 470 A HOH 472 3 HOH HOH 472 A HOH 473 3 HOH HOH 473 A HOH 401 3 HOH HOH 401 B HOH 403 3 HOH HOH 403 B HOH 405 3 HOH HOH 405 B HOH 408 3 HOH HOH 408 B HOH 409 3 HOH HOH 409 B HOH 412 3 HOH HOH 412 B HOH 416 3 HOH HOH 416 B HOH 420 3 HOH HOH 420 B HOH 421 3 HOH HOH 421 B HOH 422 3 HOH HOH 422 B HOH 423 3 HOH HOH 423 B HOH 424 3 HOH HOH 424 B HOH 425 3 HOH HOH 425 B HOH 426 3 HOH HOH 426 B HOH 431 3 HOH HOH 431 B HOH 432 3 HOH HOH 432 B HOH 433 3 HOH HOH 433 B HOH 437 3 HOH HOH 437 B HOH 440 3 HOH HOH 440 B HOH 441 3 HOH HOH 441 B HOH 442 3 HOH HOH 442 B HOH 443 3 HOH HOH 443 B HOH 444 3 HOH HOH 444 B HOH 449 3 HOH HOH 449 B HOH 450 3 HOH HOH 450 B HOH 451 3 HOH HOH 451 B HOH 459 3 HOH HOH 459 B HOH 462 3 HOH HOH 462 B HOH 465 3 HOH HOH 465 B HOH 466 3 HOH HOH 466 B HOH 471 3 HOH HOH 471 B PRO 1 n 1 PRO 1 A GLN 2 n 2 GLN 2 A VAL 3 n 3 VAL 3 A THR 4 n 4 THR 4 A LEU 5 n 5 LEU 5 A TRP 6 n 6 TRP 6 A GLN 7 n 7 GLN 7 A ARG 8 n 8 ARG 8 A PRO 9 n 9 PRO 9 A LEU 10 n 10 LEU 10 A VAL 11 n 11 VAL 11 A THR 12 n 12 THR 12 A ILE 13 n 13 ILE 13 A LYS 14 n 14 LYS 14 A ILE 15 n 15 ILE 15 A GLY 16 n 16 GLY 16 A GLY 17 n 17 GLY 17 A GLN 18 n 18 GLN 18 A LEU 19 n 19 LEU 19 A LYS 20 n 20 LYS 20 A GLU 21 n 21 GLU 21 A ALA 22 n 22 ALA 22 A LEU 23 n 23 LEU 23 A LEU 24 n 24 LEU 24 A ASP 25 n 25 ASP 25 A THR 26 n 26 THR 26 A GLY 27 n 27 GLY 27 A ALA 28 n 28 ALA 28 A ASP 29 n 29 ASP 29 A ASP 30 n 30 ASP 30 A THR 31 n 31 THR 31 A VAL 32 n 32 VAL 32 A LEU 33 n 33 LEU 33 A GLU 34 n 34 GLU 34 A GLU 35 n 35 GLU 35 A MET 36 n 36 MET 36 A SER 37 n 37 SER 37 A LEU 38 n 38 LEU 38 A PRO 39 n 39 PRO 39 A GLY 40 n 40 GLY 40 A ARG 41 n 41 ARG 41 A TRP 42 n 42 TRP 42 A LYS 43 n 43 LYS 43 A PRO 44 n 44 PRO 44 A LYS 45 n 45 LYS 45 A MET 46 n 46 MET 46 A ILE 47 n 47 ILE 47 A GLY 48 n 48 GLY 48 A GLY 49 n 49 GLY 49 A ILE 50 n 50 ILE 50 A GLY 51 n 51 GLY 51 A GLY 52 n 52 GLY 52 A PHE 53 n 53 PHE 53 A ILE 54 n 54 ILE 54 A LYS 55 n 55 LYS 55 A VAL 56 n 56 VAL 56 A ARG 57 n 57 ARG 57 A GLN 58 n 58 GLN 58 A TYR 59 n 59 TYR 59 A ASP 60 n 60 ASP 60 A GLN 61 n 61 GLN 61 A ILE 62 n 62 ILE 62 A LEU 63 n 63 LEU 63 A ILE 64 n 64 ILE 64 A GLU 65 n 65 GLU 65 A ILE 66 n 66 ILE 66 A CYS 67 n 67 CYS 67 A GLY 68 n 68 GLY 68 A HIS 69 n 69 HIS 69 A LYS 70 n 70 LYS 70 A ALA 71 n 71 ALA 71 A ILE 72 n 72 ILE 72 A GLY 73 n 73 GLY 73 A THR 74 n 74 THR 74 A VAL 75 n 75 VAL 75 A LEU 76 n 76 LEU 76 A VAL 77 n 77 VAL 77 A GLY 78 n 78 GLY 78 A PRO 79 n 79 PRO 79 A THR 80 n 80 THR 80 A PRO 81 n 81 PRO 81 A PHE 82 n 82 PHE 82 A ASN 83 n 83 ASN 83 A VAL 84 n 84 VAL 84 A ILE 85 n 85 ILE 85 A GLY 86 n 86 GLY 86 A ARG 87 n 87 ARG 87 A ASN 88 n 88 ASN 88 A LEU 89 n 89 LEU 89 A LEU 90 n 90 LEU 90 A THR 91 n 91 THR 91 A GLN 92 n 92 GLN 92 A ILE 93 n 93 ILE 93 A GLY 94 n 94 GLY 94 A CYS 95 n 95 CYS 95 A THR 96 n 96 THR 96 A LEU 97 n 97 LEU 97 A ASN 98 n 98 ASN 98 A PHE 99 n 99 PHE 99 A PRO 101 n 1 PRO 1 B GLN 102 n 2 GLN 2 B VAL 103 n 3 VAL 3 B THR 104 n 4 THR 4 B LEU 105 n 5 LEU 5 B TRP 106 n 6 TRP 6 B GLN 107 n 7 GLN 7 B ARG 108 n 8 ARG 8 B PRO 109 n 9 PRO 9 B LEU 110 n 10 LEU 10 B VAL 111 n 11 VAL 11 B THR 112 n 12 THR 12 B ILE 113 n 13 ILE 13 B LYS 114 n 14 LYS 14 B ILE 115 n 15 ILE 15 B GLY 116 n 16 GLY 16 B GLY 117 n 17 GLY 17 B GLN 118 n 18 GLN 18 B LEU 119 n 19 LEU 19 B LYS 120 n 20 LYS 20 B GLU 121 n 21 GLU 21 B ALA 122 n 22 ALA 22 B LEU 123 n 23 LEU 23 B LEU 124 n 24 LEU 24 B ASP 125 n 25 ASP 25 B THR 126 n 26 THR 26 B GLY 127 n 27 GLY 27 B ALA 128 n 28 ALA 28 B ASP 129 n 29 ASP 29 B ASP 130 n 30 ASP 30 B THR 131 n 31 THR 31 B VAL 132 n 32 VAL 32 B LEU 133 n 33 LEU 33 B GLU 134 n 34 GLU 34 B GLU 135 n 35 GLU 35 B MET 136 n 36 MET 36 B SER 137 n 37 SER 37 B LEU 138 n 38 LEU 38 B PRO 139 n 39 PRO 39 B GLY 140 n 40 GLY 40 B ARG 141 n 41 ARG 41 B TRP 142 n 42 TRP 42 B LYS 143 n 43 LYS 43 B PRO 144 n 44 PRO 44 B LYS 145 n 45 LYS 45 B MET 146 n 46 MET 46 B ILE 147 n 47 ILE 47 B GLY 148 n 48 GLY 48 B GLY 149 n 49 GLY 49 B ILE 150 n 50 ILE 50 B GLY 151 n 51 GLY 51 B GLY 152 n 52 GLY 52 B PHE 153 n 53 PHE 53 B ILE 154 n 54 ILE 54 B LYS 155 n 55 LYS 55 B VAL 156 n 56 VAL 56 B ARG 157 n 57 ARG 57 B GLN 158 n 58 GLN 58 B TYR 159 n 59 TYR 59 B ASP 160 n 60 ASP 60 B GLN 161 n 61 GLN 61 B ILE 162 n 62 ILE 62 B LEU 163 n 63 LEU 63 B ILE 164 n 64 ILE 64 B GLU 165 n 65 GLU 65 B ILE 166 n 66 ILE 66 B CYS 167 n 67 CYS 67 B GLY 168 n 68 GLY 68 B HIS 169 n 69 HIS 69 B LYS 170 n 70 LYS 70 B ALA 171 n 71 ALA 71 B ILE 172 n 72 ILE 72 B GLY 173 n 73 GLY 73 B THR 174 n 74 THR 74 B VAL 175 n 75 VAL 75 B LEU 176 n 76 LEU 76 B VAL 177 n 77 VAL 77 B GLY 178 n 78 GLY 78 B PRO 179 n 79 PRO 79 B THR 180 n 80 THR 80 B PRO 181 n 81 PRO 81 B PHE 182 n 82 PHE 82 B ASN 183 n 83 ASN 83 B VAL 184 n 84 VAL 84 B ILE 185 n 85 ILE 85 B GLY 186 n 86 GLY 86 B ARG 187 n 87 ARG 87 B ASN 188 n 88 ASN 88 B LEU 189 n 89 LEU 89 B LEU 190 n 90 LEU 90 B THR 191 n 91 THR 91 B GLN 192 n 92 GLN 92 B ILE 193 n 93 ILE 93 B GLY 194 n 94 GLY 94 B CYS 195 n 95 CYS 95 B THR 196 n 96 THR 96 B LEU 197 n 97 LEU 97 B ASN 198 n 98 ASN 98 B PHE 199 n 99 PHE 99 B author_and_software_defined_assembly PISA,PQS 2 dimeric 5240 -32 9090 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 5.50 0.50 120.30 125.80 A A A NE CZ NH1 ARG ARG ARG 87 87 87 N 1 -3.95 0.50 120.30 116.35 A A A NE CZ NH2 ARG ARG ARG 87 87 87 N 1 -3.34 0.50 120.30 116.96 B B B NE CZ NH2 ARG ARG ARG 8 8 8 N 1 -11.82 1.90 110.30 98.48 B B B N CA CB THR THR THR 91 91 91 N 1 A A CE2 CD2 TRP TRP 6 6 0.083 0.012 1.409 1.492 N 1 A A CE2 CD2 TRP TRP 42 42 0.079 0.012 1.409 1.488 N 1 B B CE2 CD2 TRP TRP 6 6 0.084 0.012 1.409 1.493 N 1 B B CE2 CD2 TRP TRP 42 42 0.087 0.012 1.409 1.496 N 1 A B OE1 HE21 GLN GLN 61 92 1.44 1_555 4_565 1 A B HE22 O GLN GLN 61 92 1.59 1_555 4_565 1 A CYS 67 50.19 -159.16 1 B CYS 67 48.63 -137.76 0.199 0.199 1.8 20.0 17416 99 1 2 MOLECULAR REPLACEMENT 1.8 20.0 70 1650 62 0 1518 0.012 2.9 1.8 20.0 1BWB 17416 2 0.08 0.079 1 5 99 refinement X-PLOR HIV-1 PROTEASE (V82F/I84V) DOUBLE MUTANT COMPLEXED WITH SD146 OF DUPONT PHARMACEUTICALS 1 N N 1 N N 2 N N 3 N N 3 N N A GLY 86 A GLY 86 HELX_P A THR 91 A THR 91 1 1 6 B GLY 86 B GLY 86 HELX_P B THR 91 B THR 91 1 2 6 HYDROLASE HIV-1 PROTEASE, HYDROLASE POL_HV1H2 UNP 1 P04585 57 155 1BWB 1 99 P04585 A 1 1 99 57 155 1BWB 1 99 P04585 B 1 1 99 1 VAL engineered mutation PHE 82 1BWB A P04585 UNP 138 82 1 ILE engineered mutation VAL 84 1BWB A P04585 UNP 140 84 2 VAL engineered mutation PHE 82 1BWB B P04585 UNP 138 82 2 ILE engineered mutation VAL 84 1BWB B P04585 UNP 140 84 8 8 4 anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LYS 43 A LYS 43 A GLY 49 A GLY 49 A GLY 52 A GLY 52 A ILE 66 A ILE 66 A HIS 69 A HIS 69 A GLY 78 A GLY 78 A THR 31 A THR 31 A GLU 34 A GLU 34 A ASN 83 A ASN 83 A ILE 85 A ILE 85 A GLN 18 A GLN 18 A ASP 25 A ASP 25 A PRO 9 A PRO 9 A ILE 15 A ILE 15 A GLU 65 A GLU 65 A ILE 66 A ILE 66 B LYS 43 B LYS 43 B GLY 49 B GLY 49 B GLY 52 B GLY 52 B ILE 66 B ILE 66 B HIS 69 B HIS 69 B GLY 78 B GLY 78 B THR 31 B THR 31 B GLU 34 B GLU 34 B ASN 83 B ASN 83 B ILE 85 B ILE 85 B GLN 18 B GLN 18 B ASP 25 B ASP 25 B PRO 9 B PRO 9 B ILE 15 B ILE 15 B GLU 65 B GLU 65 B ILE 66 B ILE 66 A PRO 1 A PRO 1 A THR 4 A THR 4 B THR 96 B THR 96 B PHE 99 B PHE 99 A THR 96 A THR 96 A PHE 99 A PHE 99 B PRO 1 B PRO 1 B THR 4 B THR 4 BINDING SITE FOR RESIDUE 146 B 641 B 146 641 Software 26 A ASP 25 A ASP 25 26 1_555 A GLY 27 A GLY 27 26 1_555 A ALA 28 A ALA 28 26 1_555 A ASP 29 A ASP 29 26 1_555 A ASP 30 A ASP 30 26 1_555 A VAL 32 A VAL 32 26 1_555 A LYS 45 A LYS 45 26 1_555 A ILE 47 A ILE 47 26 1_555 A GLY 48 A GLY 48 26 1_555 A GLY 49 A GLY 49 26 1_555 A ILE 50 A ILE 50 26 1_555 A PRO 81 A PRO 81 26 6_555 A PRO 81 A PRO 81 26 1_555 A VAL 84 A VAL 84 26 1_555 B ASP 25 B ASP 25 26 1_555 B GLY 27 B GLY 27 26 1_555 B ALA 28 B ALA 28 26 1_555 B ASP 29 B ASP 29 26 1_555 B ASP 30 B ASP 30 26 1_555 B VAL 32 B VAL 32 26 1_555 B MET 46 B MET 46 26 1_555 B ILE 47 B ILE 47 26 1_555 B GLY 48 B GLY 48 26 1_555 B GLY 49 B GLY 49 26 1_555 B ILE 50 B ILE 50 26 1_555 B VAL 84 B VAL 84 26 1_555 169 P 61