1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Asensio, J.L. Brown, T. Lane, A.N. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking UK Structure Fold.Des. FODEFH 1263 0969-2126 7 1 11 10.1016/S0969-2126(99)80004-5 10368268 Solution conformation of a parallel DNA triple helix with 5' and 3' triplex-duplex junctions. 1999 US Biochemistry BICHAW 0033 0006-2960 36 14502 Solution Conformation of an Intramolecular DNA Triplex Containing a Nonnucleotide Linker: Comparison with the DNA Duplex 1997 10.2210/pdb1bwg/pdb pdb_00001bwg 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 4353.854 DNA (5'-D(*GP*AP*CP*TP*GP*AP*GP*AP*GP*AP*CP*GP*TP*A)-3') 1 syn polymer 4206.740 DNA (5'-D(*TP*AP*CP*GP*TP*CP*TP*CP*TP*CP*AP*GP*TP*C)-3') 1 syn polymer 1735.166 DNA (5'-D(*CP*TP*CP*TP*CP*T)-3') 1 syn polymer no no (DG)(DA)(DC)(DT)(DG)(DA)(DG)(DA)(DG)(DA)(DC)(DG)(DT)(DA) GACTGAGAGACGTA A polydeoxyribonucleotide no no (DT)(DA)(DC)(DG)(DT)(DC)(DT)(DC)(DT)(DC)(DA)(DG)(DT)(DC) TACGTCTCTCAGTC B polydeoxyribonucleotide no no (DC)(DT)(DC)(DT)(DC)(DT) CTCTCT C polydeoxyribonucleotide n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n 1.219 1 19 A 1 B 14 -1.704 A_DG1:DC14_B 1 -9.837 -1.142 0.127 -0.348 -6.484 1 20 A 2 B 13 -0.979 A_DA2:DT13_B 2 -14.938 -0.199 -0.113 -0.019 -4.128 1 19 A 3 B 12 -4.252 A_DC3:DG12_B 3 -13.421 0.980 0.482 -0.418 -2.020 1 20 A 4 B 11 -2.757 A_DT4:DA11_B 4 -20.407 0.163 0.092 -0.059 19.766 1 19 A 5 B 10 -2.265 A_DG5:DC10_B 5 -10.340 0.007 0.492 0.036 10.732 1 20 A 6 B 9 0.588 A_DA6:DT9_B 6 -18.755 -0.349 0.570 -0.190 6.146 1 19 A 7 B 8 -4.394 A_DG7:DC8_B 7 -11.429 -1.101 0.075 -0.478 4.612 1 20 A 8 B 7 -1.078 A_DA8:DT7_B 8 -16.712 -0.333 0.468 -0.130 -3.163 1 19 A 9 B 6 -1.663 A_DG9:DC6_B 9 -18.447 -0.961 0.118 -0.327 -7.146 1 20 A 10 B 5 -5.885 A_DA10:DT5_B 10 -21.081 0.039 0.103 -0.031 -12.289 1 19 A 11 B 4 -3.870 A_DC11:DG4_B 11 -12.782 1.023 0.570 -0.408 4.783 1 19 A 12 B 3 -2.684 A_DG12:DC3_B 12 -17.287 0.477 0.404 -0.019 -7.749 1 20 A 13 B 2 -2.206 A_DT13:DA2_B 13 -25.364 0.140 0.246 -0.051 11.196 1 20 A 14 B 1 3.330 A_DA14:DT1_B 14 -7.260 -0.440 0.365 -0.111 3.275 35.585 A A 1 2 3.220 B B 14 13 3.358 1.965 -0.146 -1.082 AA_DG1DA2:DT13DC14_BB 1 2.760 -4.522 35.429 -2.061 0.648 3.140 45.058 A A 2 3 -0.364 B B 13 12 3.101 -0.278 -0.473 -0.617 AA_DA2DC3:DG12DT13_BB 2 -7.201 9.433 44.508 -0.781 -0.004 2.781 29.167 A A 3 4 6.684 B B 12 11 2.981 3.345 -0.269 -0.916 AA_DC3DT4:DA11DG12_BB 3 4.609 -9.209 28.617 -2.468 1.428 2.919 32.707 A A 4 5 13.892 B B 11 10 2.887 7.730 -0.357 0.386 AA_DT4DG5:DC10DA11_BB 4 -4.361 7.837 31.512 -0.524 -0.048 3.247 33.935 A A 5 6 -2.423 B B 10 9 3.215 -1.414 0.855 -1.091 AA_DG5DA6:DT9DC10_BB 5 -0.398 0.683 33.904 -1.645 -1.528 2.967 33.012 A A 6 7 9.458 B B 9 8 3.190 5.351 -0.100 -1.126 AA_DA6DG7:DC8DT9_BB 6 1.220 -2.157 32.565 -2.841 0.373 3.089 34.181 A A 7 8 -3.120 B B 8 7 3.104 -1.832 0.742 -0.965 AA_DG7DA8:DT7DC8_BB 7 -2.495 4.250 34.045 -1.367 -1.636 3.216 33.424 A A 8 9 3.587 B B 7 6 3.306 2.062 0.083 -1.364 AA_DA8DG9:DC6DT7_BB 8 -0.669 1.164 33.355 -2.712 -0.255 3.034 35.653 A A 9 10 9.090 B B 6 5 3.215 5.545 0.126 -0.952 AA_DG9DA10:DT5DC6_BB 9 -0.215 0.353 35.233 -2.328 -0.237 3.305 42.647 A A 10 11 0.071 B B 5 4 3.248 0.052 -0.661 -0.850 AA_DA10DC11:DG4DT5_BB 10 -5.757 7.938 42.275 -1.174 0.326 2.585 31.362 A A 11 12 9.792 B B 4 3 2.772 5.260 -0.376 -0.584 AA_DC11DG12:DC3DG4_BB 11 3.294 -6.132 30.757 -1.899 1.208 3.191 32.636 A A 12 13 5.747 B B 3 2 3.315 3.223 -0.056 -1.043 AA_DG12DT13:DA2DC3_BB 12 1.883 -3.357 32.428 -2.414 0.426 2.881 37.643 A A 13 14 -1.963 B B 2 1 2.776 -1.264 1.535 1.122 AA_DT13DA14:DT1DA2_BB 13 4.028 -6.255 37.414 1.882 -1.925 database_2 pdbx_database_status pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Other 1 0 1999-03-23 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-02-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _pdbx_nmr_software.name ENSEMBLE OF 10 STRUCTURES ENSEMBLE OF 10 STRUCTURES Y BNL 1998-09-22 REL REL THE STRUCTURES WERE DETERMINED FROM NOE AND J-COUPLING DATA ON TWO INTRAMOLECULAR DNA TRIPLE HELICES CONTAINING IDENTICAL CORE SEGMENTS. THE RESTRAINTS WERE GENERATED FOR THE SUPERMOLECULE CONTAINING THE CORE TRIPLEX REGION AND THE 5' AND 3' DUPLEX EXTEN SIONS. LEAST RESTRAINT VIOLATIONS 30 10 NOESY DQF-COSY ROESY 13C-HSQC 0.1 5 1 atm 313 K RESTRAINED MD RESTRAINED MOLECULAR DYNAMICS BIOSYM refinement Discover structure solution Discover 500 Varian UNITYPLUS 600 Varian UNITYPLUS G 1 n 1 DG 1 A A 2 n 2 DA 2 A C 3 n 3 DC 3 A T 4 n 4 DT 4 A G 5 n 5 DG 5 A A 6 n 6 DA 6 A G 7 n 7 DG 7 A A 8 n 8 DA 8 A G 9 n 9 DG 9 A A 10 n 10 DA 10 A C 11 n 11 DC 11 A G 12 n 12 DG 12 A T 13 n 13 DT 13 A A 14 n 14 DA 14 A T 1 n 1 DT 1 B A 2 n 2 DA 2 B C 3 n 3 DC 3 B G 4 n 4 DG 4 B T 5 n 5 DT 5 B C 6 n 6 DC 6 B T 7 n 7 DT 7 B C 8 n 8 DC 8 B T 9 n 9 DT 9 B C 10 n 10 DC 10 B A 11 n 11 DA 11 B G 12 n 12 DG 12 B T 13 n 13 DT 13 B C 14 n 14 DC 14 B C 1 n 1 DC 1 C T 2 n 2 DT 2 C C 3 n 3 DC 3 C T 4 n 4 DT 4 C C 5 n 5 DC 5 C T 6 n 6 DT 6 C author_defined_assembly 3 trimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 1.81 0.30 108.30 110.11 A A A O4' C1' N9 DG DG DG 1 1 1 N 1 1.95 0.30 108.30 110.25 A A A O4' C1' N9 DA DA DA 2 2 2 N 1 3.76 0.60 118.00 121.76 A A A C4 C5 C6 DT DT DT 4 4 4 N 1 3.88 0.30 108.30 112.18 A A A O4' C1' N9 DG DG DG 7 7 7 N 1 2.10 0.30 108.30 110.40 A A A O4' C1' N9 DG DG DG 9 9 9 N 1 5.34 0.30 108.30 113.64 A A A O4' C1' N9 DA DA DA 10 10 10 N 1 2.36 0.30 108.30 110.66 A A A O4' C1' N1 DC DC DC 11 11 11 N 1 1.85 0.30 108.30 110.15 A A A O4' C1' N1 DT DT DT 13 13 13 N 1 3.32 0.30 108.30 111.62 A A A O4' C1' N9 DA DA DA 14 14 14 N 1 8.07 0.30 108.30 116.37 B B B O4' C1' N1 DT DT DT 1 1 1 N 1 3.85 0.30 108.30 112.15 B B B O4' C1' N1 DC DC DC 3 3 3 N 1 3.14 0.30 108.30 111.44 B B B O4' C1' N9 DG DG DG 4 4 4 N 1 2.97 0.30 108.30 111.27 B B B O4' C1' N1 DC DC DC 6 6 6 N 1 2.04 0.30 108.30 110.34 B B B O4' C1' N1 DT DT DT 7 7 7 N 1 2.15 0.30 108.30 110.45 B B B O4' C1' N1 DC DC DC 8 8 8 N 1 6.44 0.30 108.30 114.74 B B B O4' C1' N9 DG DG DG 12 12 12 N 1 2.88 0.30 108.30 111.18 B B B O4' C1' N1 DC DC DC 14 14 14 N 1 8.87 0.30 108.30 117.17 C C C O4' C1' N1 DC DC DC 1 1 1 N 1 -6.15 0.60 122.90 116.75 C C C C6 C5 C7 DT DT DT 2 2 2 N 1 2.80 0.30 108.30 111.10 C C C O4' C1' N1 DC DC DC 3 3 3 N 1 -3.66 0.60 122.90 119.24 C C C C6 C5 C7 DT DT DT 4 4 4 N 1 2.21 0.30 108.30 110.51 C C C O4' C1' N1 DC DC DC 5 5 5 N 1 3.53 0.30 108.30 111.83 C C C O4' C1' N1 DT DT DT 6 6 6 N 2 1.93 0.30 108.30 110.23 A A A O4' C1' N9 DA DA DA 2 2 2 N 2 3.75 0.30 108.30 112.05 A A A O4' C1' N9 DG DG DG 7 7 7 N 2 2.04 0.30 108.30 110.34 A A A O4' C1' N9 DG DG DG 9 9 9 N 2 5.36 0.30 108.30 113.66 A A A O4' C1' N9 DA DA DA 10 10 10 N 2 2.69 0.30 108.30 110.99 A A A O4' C1' N1 DC DC DC 11 11 11 N 2 1.89 0.30 108.30 110.19 A A A O4' C1' N1 DT DT DT 13 13 13 N 2 3.25 0.30 108.30 111.55 A A A O4' C1' N9 DA DA DA 14 14 14 N 2 8.05 0.30 108.30 116.35 B B B O4' C1' N1 DT DT DT 1 1 1 N 2 4.10 0.30 108.30 112.40 B B B O4' C1' N1 DC DC DC 3 3 3 N 2 2.77 0.30 108.30 111.07 B B B O4' C1' N9 DG DG DG 4 4 4 N 2 2.88 0.30 108.30 111.18 B B B O4' C1' N1 DC DC DC 6 6 6 N 2 2.70 0.30 108.30 111.00 B B B O4' C1' N1 DT DT DT 7 7 7 N 2 3.47 0.30 108.30 111.77 B B B O4' C1' N1 DT DT DT 9 9 9 N 2 5.92 0.30 108.30 114.22 B B B O4' C1' N9 DG DG DG 12 12 12 N 2 2.95 0.30 108.30 111.25 B B B O4' C1' N1 DC DC DC 14 14 14 N 2 8.58 0.30 108.30 116.88 C C C O4' C1' N1 DC DC DC 1 1 1 N 2 -5.59 0.60 122.90 117.31 C C C C6 C5 C7 DT DT DT 2 2 2 N 2 2.67 0.30 108.30 110.97 C C C O4' C1' N1 DC DC DC 3 3 3 N 2 -4.06 0.60 122.90 118.84 C C C C6 C5 C7 DT DT DT 4 4 4 N 2 2.21 0.30 108.30 110.51 C C C O4' C1' N1 DC DC DC 5 5 5 N 2 3.46 0.30 108.30 111.76 C C C O4' C1' N1 DT DT DT 6 6 6 N 3 1.85 0.30 108.30 110.15 A A A O4' C1' N9 DA DA DA 2 2 2 N 3 3.69 0.60 118.00 121.69 A A A C4 C5 C6 DT DT DT 4 4 4 N 3 3.74 0.30 108.30 112.04 A A A O4' C1' N9 DG DG DG 7 7 7 N 3 1.88 0.30 108.30 110.18 A A A O4' C1' N9 DA DA DA 8 8 8 N 3 2.39 0.30 108.30 110.69 A A A O4' C1' N9 DG DG DG 9 9 9 N 3 5.39 0.30 108.30 113.69 A A A O4' C1' N9 DA DA DA 10 10 10 N 3 2.47 0.30 108.30 110.77 A A A O4' C1' N1 DC DC DC 11 11 11 N 3 1.98 0.30 108.30 110.28 A A A O4' C1' N1 DT DT DT 13 13 13 N 3 3.28 0.30 108.30 111.58 A A A O4' C1' N9 DA DA DA 14 14 14 N 3 7.99 0.30 108.30 116.29 B B B O4' C1' N1 DT DT DT 1 1 1 N 3 3.65 0.30 108.30 111.95 B B B O4' C1' N1 DC DC DC 3 3 3 N 3 2.77 0.30 108.30 111.07 B B B O4' C1' N1 DT DT DT 5 5 5 N 3 3.09 0.30 108.30 111.39 B B B O4' C1' N1 DC DC DC 6 6 6 N 3 2.74 0.30 108.30 111.04 B B B O4' C1' N1 DT DT DT 7 7 7 N 3 2.28 0.30 108.30 110.58 B B B O4' C1' N1 DC DC DC 8 8 8 N 3 5.56 0.30 108.30 113.86 B B B O4' C1' N9 DG DG DG 12 12 12 N 3 2.89 0.30 108.30 111.19 B B B O4' C1' N1 DC DC DC 14 14 14 N 3 8.63 0.30 108.30 116.93 C C C O4' C1' N1 DC DC DC 1 1 1 N 3 -5.30 0.60 122.90 117.60 C C C C6 C5 C7 DT DT DT 2 2 2 N 3 2.88 0.30 108.30 111.18 C C C O4' C1' N1 DC DC DC 3 3 3 N 3 -4.02 0.60 122.90 118.88 C C C C6 C5 C7 DT DT DT 4 4 4 N 3 1.81 0.30 108.30 110.11 C C C O4' C1' N1 DC DC DC 5 5 5 N 3 3.43 0.30 108.30 111.73 C C C O4' C1' N1 DT DT DT 6 6 6 N 4 2.02 0.30 108.30 110.32 A A A O4' C1' N9 DA DA DA 2 2 2 N 4 3.68 0.60 118.00 121.68 A A A C4 C5 C6 DT DT DT 4 4 4 N 4 3.94 0.30 108.30 112.24 A A A O4' C1' N9 DG DG DG 7 7 7 N 4 2.32 0.30 108.30 110.62 A A A O4' C1' N9 DG DG DG 9 9 9 N 4 4.42 0.30 108.30 112.72 A A A O4' C1' N9 DA DA DA 10 10 10 N 4 2.73 0.30 108.30 111.03 A A A O4' C1' N1 DC DC DC 11 11 11 N 4 3.22 0.30 108.30 111.52 A A A O4' C1' N9 DA DA DA 14 14 14 N 4 8.06 0.30 108.30 116.36 B B B O4' C1' N1 DT DT DT 1 1 1 N 4 3.81 0.30 108.30 112.11 B B B O4' C1' N1 DC DC DC 3 3 3 N 4 2.65 0.30 108.30 110.95 B B B O4' C1' N9 DG DG DG 4 4 4 N 4 2.54 0.30 108.30 110.84 B B B O4' C1' N1 DC DC DC 6 6 6 N 4 2.88 0.30 108.30 111.18 B B B O4' C1' N1 DT DT DT 7 7 7 N 4 3.33 0.30 108.30 111.63 B B B O4' C1' N1 DT DT DT 9 9 9 N 4 5.69 0.30 108.30 113.99 B B B O4' C1' N9 DG DG DG 12 12 12 N 4 2.98 0.30 108.30 111.28 B B B O4' C1' N1 DC DC DC 14 14 14 N 4 8.55 0.30 108.30 116.85 C C C O4' C1' N1 DC DC DC 1 1 1 N 4 -5.53 0.60 122.90 117.37 C C C C6 C5 C7 DT DT DT 2 2 2 N 4 3.08 0.30 108.30 111.38 C C C O4' C1' N1 DC DC DC 3 3 3 N 4 -4.13 0.60 122.90 118.77 C C C C6 C5 C7 DT DT DT 4 4 4 N 4 2.67 0.30 108.30 110.97 C C C O4' C1' N1 DC DC DC 5 5 5 N 4 3.46 0.30 108.30 111.76 C C C O4' C1' N1 DT DT DT 6 6 6 N 5 1.83 0.30 108.30 110.13 A A A O4' C1' N9 DG DG DG 1 1 1 N 5 1.92 0.30 108.30 110.22 A A A O4' C1' N9 DA DA DA 2 2 2 N 5 3.75 0.60 118.00 121.75 A A A C4 C5 C6 DT DT DT 4 4 4 N 5 3.64 0.30 108.30 111.94 A A A O4' C1' N9 DG DG DG 7 7 7 N 5 2.28 0.30 108.30 110.58 A A A O4' C1' N9 DG DG DG 9 9 9 N 5 5.25 0.30 108.30 113.55 A A A O4' C1' N9 DA DA DA 10 10 10 N 5 2.52 0.30 108.30 110.82 A A A O4' C1' N1 DC DC DC 11 11 11 N 5 1.98 0.30 108.30 110.28 A A A O4' C1' N1 DT DT DT 13 13 13 N 5 3.31 0.30 108.30 111.61 A A A O4' C1' N9 DA DA DA 14 14 14 N 5 8.02 0.30 108.30 116.32 B B B O4' C1' N1 DT DT DT 1 1 1 N 5 3.62 0.30 108.30 111.92 B B B O4' C1' N1 DC DC DC 3 3 3 N 5 2.72 0.30 108.30 111.02 B B B O4' C1' N1 DT DT DT 5 5 5 N 5 3.28 0.30 108.30 111.58 B B B O4' C1' N1 DC DC DC 6 6 6 N 5 2.70 0.30 108.30 111.00 B B B O4' C1' N1 DT DT DT 7 7 7 N 5 2.08 0.30 108.30 110.38 B B B O4' C1' N1 DC DC DC 8 8 8 N 5 6.38 0.30 108.30 114.68 B B B O4' C1' N9 DG DG DG 12 12 12 N 5 2.85 0.30 108.30 111.15 B B B O4' C1' N1 DC DC DC 14 14 14 N 5 8.79 0.30 108.30 117.09 C C C O4' C1' N1 DC DC DC 1 1 1 N 5 -6.03 0.60 122.90 116.87 C C C C6 C5 C7 DT DT DT 2 2 2 N 5 2.78 0.30 108.30 111.08 C C C O4' C1' N1 DC DC DC 3 3 3 N 5 1.83 0.30 108.30 110.13 C C C O4' C1' N1 DC DC DC 5 5 5 N 5 3.45 0.30 108.30 111.75 C C C O4' C1' N1 DT DT DT 6 6 6 N 6 1.95 0.30 108.30 110.25 A A A O4' C1' N9 DG DG DG 1 1 1 N 6 3.64 0.60 118.00 121.64 A A A C4 C5 C6 DT DT DT 4 4 4 N 6 2.23 0.30 108.30 110.53 A A A O4' C1' N9 DG DG DG 7 7 7 N 6 2.63 0.30 108.30 110.93 A A A O4' C1' N9 DG DG DG 9 9 9 N 6 4.94 0.30 108.30 113.24 A A A O4' C1' N9 DA DA DA 10 10 10 N 6 2.56 0.30 108.30 110.86 A A A O4' C1' N1 DC DC DC 11 11 11 N 6 2.00 0.30 108.30 110.30 A A A O4' C1' N1 DT DT DT 13 13 13 N 6 3.32 0.30 108.30 111.62 A A A O4' C1' N9 DA DA DA 14 14 14 N 6 8.00 0.30 108.30 116.30 B B B O4' C1' N1 DT DT DT 1 1 1 N 6 3.57 0.30 108.30 111.87 B B B O4' C1' N1 DC DC DC 3 3 3 N 6 2.70 0.30 108.30 111.00 B B B O4' C1' N1 DT DT DT 5 5 5 N 6 2.05 0.30 108.30 110.35 B B B O4' C1' N1 DC DC DC 6 6 6 N 6 3.02 0.30 108.30 111.32 B B B O4' C1' N1 DT DT DT 7 7 7 N 6 2.75 0.30 108.30 111.05 B B B O4' C1' N1 DC DC DC 8 8 8 N 6 2.46 0.30 108.30 110.76 B B B O4' C1' N1 DT DT DT 9 9 9 N 6 1.93 0.30 108.30 110.23 B B B O4' C1' N9 DA DA DA 11 11 11 N 6 6.54 0.30 108.30 114.84 B B B O4' C1' N9 DG DG DG 12 12 12 N 6 2.92 0.30 108.30 111.22 B B B O4' C1' N1 DC DC DC 14 14 14 N 6 8.59 0.30 108.30 116.89 C C C O4' C1' N1 DC DC DC 1 1 1 N 6 -5.61 0.60 122.90 117.29 C C C C6 C5 C7 DT DT DT 2 2 2 N 6 2.72 0.30 108.30 111.02 C C C O4' C1' N1 DC DC DC 3 3 3 N 6 -3.89 0.60 122.90 119.01 C C C C6 C5 C7 DT DT DT 4 4 4 N 6 3.17 0.30 108.30 111.47 C C C O4' C1' N1 DT DT DT 6 6 6 N 7 1.80 0.30 108.30 110.10 A A A O4' C1' N9 DG DG DG 1 1 1 N 7 2.08 0.30 108.30 110.38 A A A O4' C1' N9 DA DA DA 2 2 2 N 7 4.25 0.30 108.30 112.55 A A A O4' C1' N9 DG DG DG 7 7 7 N 7 2.15 0.30 108.30 110.45 A A A O4' C1' N9 DG DG DG 9 9 9 N 7 4.52 0.30 108.30 112.82 A A A O4' C1' N9 DA DA DA 10 10 10 N 7 2.43 0.30 108.30 110.73 A A A O4' C1' N1 DC DC DC 11 11 11 N 7 3.25 0.30 108.30 111.55 A A A O4' C1' N9 DA DA DA 14 14 14 N 7 8.00 0.30 108.30 116.30 B B B O4' C1' N1 DT DT DT 1 1 1 N 7 3.55 0.30 108.30 111.85 B B B O4' C1' N1 DC DC DC 3 3 3 N 7 2.86 0.30 108.30 111.16 B B B O4' C1' N9 DG DG DG 4 4 4 N 7 -3.61 0.60 122.90 119.29 B B B C6 C5 C7 DT DT DT 5 5 5 N 7 3.22 0.30 108.30 111.52 B B B O4' C1' N1 DC DC DC 6 6 6 N 7 2.75 0.30 108.30 111.05 B B B O4' C1' N1 DC DC DC 8 8 8 N 7 2.53 0.30 108.30 110.83 B B B O4' C1' N1 DT DT DT 9 9 9 N 7 3.48 0.30 108.30 111.78 B B B O4' C1' N1 DC DC DC 10 10 10 N 7 6.68 0.30 108.30 114.98 B B B O4' C1' N9 DG DG DG 12 12 12 N 7 2.88 0.30 108.30 111.18 B B B O4' C1' N1 DC DC DC 14 14 14 N 7 8.73 0.30 108.30 117.03 C C C O4' C1' N1 DC DC DC 1 1 1 N 7 -6.18 0.60 122.90 116.72 C C C C6 C5 C7 DT DT DT 2 2 2 N 7 2.78 0.30 108.30 111.08 C C C O4' C1' N1 DC DC DC 3 3 3 N 7 3.06 0.30 108.30 111.36 C C C O4' C1' N1 DC DC DC 5 5 5 N 7 3.52 0.30 108.30 111.82 C C C O4' C1' N1 DT DT DT 6 6 6 N 8 2.35 0.30 108.30 110.65 A A A O4' C1' N9 DG DG DG 1 1 1 N 8 2.03 0.30 108.30 110.33 A A A O4' C1' N9 DA DA DA 2 2 2 N 8 3.74 0.60 118.00 121.74 A A A C4 C5 C6 DT DT DT 4 4 4 N 8 2.23 0.30 108.30 110.53 A A A O4' C1' N9 DG DG DG 7 7 7 N 8 2.24 0.30 108.30 110.54 A A A O4' C1' N9 DG DG DG 9 9 9 N 8 5.21 0.30 108.30 113.51 A A A O4' C1' N9 DA DA DA 10 10 10 N 8 2.41 0.30 108.30 110.71 A A A O4' C1' N1 DC DC DC 11 11 11 N 8 1.92 0.30 108.30 110.22 A A A O4' C1' N1 DT DT DT 13 13 13 N 8 3.29 0.30 108.30 111.59 A A A O4' C1' N9 DA DA DA 14 14 14 N 8 8.02 0.30 108.30 116.32 B B B O4' C1' N1 DT DT DT 1 1 1 N 8 4.00 0.30 108.30 112.30 B B B O4' C1' N1 DC DC DC 3 3 3 N 8 3.11 0.30 108.30 111.41 B B B O4' C1' N9 DG DG DG 4 4 4 N 8 -3.70 0.60 122.90 119.20 B B B C6 C5 C7 DT DT DT 5 5 5 N 8 2.82 0.30 108.30 111.12 B B B O4' C1' N1 DC DC DC 6 6 6 N 8 2.59 0.30 108.30 110.89 B B B O4' C1' N1 DT DT DT 7 7 7 N 8 3.33 0.30 108.30 111.63 B B B O4' C1' N1 DC DC DC 8 8 8 N 8 3.45 0.30 108.30 111.75 B B B O4' C1' N9 DG DG DG 12 12 12 N 8 3.22 0.30 108.30 111.52 B B B O4' C1' N1 DC DC DC 14 14 14 N 8 8.80 0.30 108.30 117.10 C C C O4' C1' N1 DC DC DC 1 1 1 N 8 -5.56 0.60 122.90 117.34 C C C C6 C5 C7 DT DT DT 2 2 2 N 8 2.78 0.30 108.30 111.08 C C C O4' C1' N1 DC DC DC 3 3 3 N 8 -4.17 0.60 122.90 118.73 C C C C6 C5 C7 DT DT DT 4 4 4 N 8 3.44 0.30 108.30 111.74 C C C O4' C1' N1 DT DT DT 6 6 6 N 9 1.96 0.30 108.30 110.26 A A A O4' C1' N9 DA DA DA 2 2 2 N 9 3.70 0.60 118.00 121.70 A A A C4 C5 C6 DT DT DT 4 4 4 N 9 5.30 0.30 108.30 113.60 A A A O4' C1' N9 DG DG DG 7 7 7 N 9 3.49 0.30 108.30 111.79 A A A O4' C1' N9 DA DA DA 8 8 8 N 9 1.91 0.30 108.30 110.21 A A A O4' C1' N9 DG DG DG 9 9 9 N 9 4.71 0.30 108.30 113.01 A A A O4' C1' N9 DA DA DA 10 10 10 N 9 2.57 0.30 108.30 110.87 A A A O4' C1' N1 DC DC DC 11 11 11 N 9 1.87 0.30 108.30 110.17 A A A O4' C1' N1 DT DT DT 13 13 13 N 9 3.25 0.30 108.30 111.55 A A A O4' C1' N9 DA DA DA 14 14 14 N 9 8.06 0.30 108.30 116.36 B B B O4' C1' N1 DT DT DT 1 1 1 N 9 4.07 0.30 108.30 112.37 B B B O4' C1' N1 DC DC DC 3 3 3 N 9 2.98 0.30 108.30 111.28 B B B O4' C1' N9 DG DG DG 4 4 4 N 9 3.01 0.30 108.30 111.31 B B B O4' C1' N1 DC DC DC 6 6 6 N 9 2.69 0.30 108.30 110.99 B B B O4' C1' N1 DT DT DT 7 7 7 N 9 2.11 0.30 108.30 110.41 B B B O4' C1' N1 DC DC DC 8 8 8 N 9 6.42 0.30 108.30 114.72 B B B O4' C1' N9 DG DG DG 12 12 12 N 9 2.85 0.30 108.30 111.15 B B B O4' C1' N1 DC DC DC 14 14 14 N 9 8.89 0.30 108.30 117.19 C C C O4' C1' N1 DC DC DC 1 1 1 N 9 -6.05 0.60 122.90 116.85 C C C C6 C5 C7 DT DT DT 2 2 2 N 9 2.95 0.30 108.30 111.25 C C C O4' C1' N1 DC DC DC 3 3 3 N 9 -3.83 0.60 122.90 119.07 C C C C6 C5 C7 DT DT DT 4 4 4 N 9 3.24 0.30 108.30 111.54 C C C O4' C1' N1 DT DT DT 6 6 6 N 10 1.80 0.30 108.30 110.10 A A A O4' C1' N9 DG DG DG 1 1 1 N 10 1.92 0.30 108.30 110.22 A A A O4' C1' N9 DA DA DA 2 2 2 N 10 3.78 0.60 118.00 121.78 A A A C4 C5 C6 DT DT DT 4 4 4 N 10 3.17 0.30 108.30 111.47 A A A O4' C1' N9 DG DG DG 7 7 7 N 10 2.28 0.30 108.30 110.58 A A A O4' C1' N9 DG DG DG 9 9 9 N 10 5.41 0.30 108.30 113.71 A A A O4' C1' N9 DA DA DA 10 10 10 N 10 2.37 0.30 108.30 110.67 A A A O4' C1' N1 DC DC DC 11 11 11 N 10 1.90 0.30 108.30 110.20 A A A O4' C1' N1 DT DT DT 13 13 13 N 10 3.27 0.30 108.30 111.57 A A A O4' C1' N9 DA DA DA 14 14 14 N 10 8.03 0.30 108.30 116.33 B B B O4' C1' N1 DT DT DT 1 1 1 N 10 3.92 0.30 108.30 112.22 B B B O4' C1' N1 DC DC DC 3 3 3 N 10 3.16 0.30 108.30 111.46 B B B O4' C1' N9 DG DG DG 4 4 4 N 10 3.02 0.30 108.30 111.32 B B B O4' C1' N1 DC DC DC 6 6 6 N 10 1.88 0.30 108.30 110.18 B B B O4' C1' N1 DT DT DT 7 7 7 N 10 2.23 0.30 108.30 110.53 B B B O4' C1' N1 DC DC DC 8 8 8 N 10 6.40 0.30 108.30 114.70 B B B O4' C1' N9 DG DG DG 12 12 12 N 10 2.90 0.30 108.30 111.20 B B B O4' C1' N1 DC DC DC 14 14 14 N 10 8.85 0.30 108.30 117.15 C C C O4' C1' N1 DC DC DC 1 1 1 N 10 -6.13 0.60 122.90 116.77 C C C C6 C5 C7 DT DT DT 2 2 2 N 10 2.88 0.30 108.30 111.18 C C C O4' C1' N1 DC DC DC 3 3 3 N 10 2.40 0.30 108.30 110.70 C C C O4' C1' N1 DC DC DC 5 5 5 N 10 3.52 0.30 108.30 111.82 C C C O4' C1' N1 DT DT DT 6 6 6 N 1 C C N3 C4 DC DC 3 3 0.045 0.007 1.335 1.380 N 1 C C N3 C4 DC DC 5 5 0.043 0.007 1.335 1.378 N 2 C C N3 C4 DC DC 1 1 0.042 0.007 1.335 1.377 N 2 C C N3 C4 DC DC 3 3 0.044 0.007 1.335 1.379 N 2 C C N3 C4 DC DC 5 5 0.043 0.007 1.335 1.378 N 3 C C N3 C4 DC DC 1 1 0.042 0.007 1.335 1.377 N 3 C C N3 C4 DC DC 3 3 0.043 0.007 1.335 1.378 N 3 C C N3 C4 DC DC 5 5 0.043 0.007 1.335 1.378 N 4 C C N3 C4 DC DC 1 1 0.043 0.007 1.335 1.378 N 4 C C N3 C4 DC DC 3 3 0.043 0.007 1.335 1.378 N 4 C C N3 C4 DC DC 5 5 0.043 0.007 1.335 1.378 N 5 C C N3 C4 DC DC 3 3 0.045 0.007 1.335 1.380 N 5 C C N3 C4 DC DC 5 5 0.044 0.007 1.335 1.379 N 6 C C N3 C4 DC DC 1 1 0.042 0.007 1.335 1.377 N 6 C C N3 C4 DC DC 3 3 0.044 0.007 1.335 1.379 N 6 C C N3 C4 DC DC 5 5 0.044 0.007 1.335 1.379 N 7 C C N3 C4 DC DC 3 3 0.045 0.007 1.335 1.380 N 7 C C N3 C4 DC DC 5 5 0.042 0.007 1.335 1.377 N 8 C C N3 C4 DC DC 1 1 0.042 0.007 1.335 1.377 N 8 C C N3 C4 DC DC 3 3 0.044 0.007 1.335 1.379 N 8 C C N3 C4 DC DC 5 5 0.043 0.007 1.335 1.378 N 9 C C N3 C4 DC DC 3 3 0.045 0.007 1.335 1.380 N 9 C C N3 C4 DC DC 5 5 0.042 0.007 1.335 1.377 N 10 C C N3 C4 DC DC 3 3 0.045 0.007 1.335 1.380 N 10 C C N3 C4 DC DC 5 5 0.042 0.007 1.335 1.377 N DNA TRIPLEX WITH 5' AND 3' JUNCTIONS, NMR, 10 STRUCTURES 1 N N 2 N N 3 N N hydrog WATSON-CRICK A DG 1 A N1 DG 1 1_555 B DC 14 B N3 DC 14 1_555 hydrog WATSON-CRICK A DG 1 A N2 DG 1 1_555 B DC 14 B O2 DC 14 1_555 hydrog WATSON-CRICK A DG 1 A O6 DG 1 1_555 B DC 14 B N4 DC 14 1_555 hydrog WATSON-CRICK A DA 2 A N1 DA 2 1_555 B DT 13 B N3 DT 13 1_555 hydrog WATSON-CRICK A DA 2 A N6 DA 2 1_555 B DT 13 B O4 DT 13 1_555 hydrog WATSON-CRICK A DC 3 A N3 DC 3 1_555 B DG 12 B N1 DG 12 1_555 hydrog WATSON-CRICK A DC 3 A N4 DC 3 1_555 B DG 12 B O6 DG 12 1_555 hydrog WATSON-CRICK A DC 3 A O2 DC 3 1_555 B DG 12 B N2 DG 12 1_555 hydrog WATSON-CRICK A DT 4 A N3 DT 4 1_555 B DA 11 B N1 DA 11 1_555 hydrog WATSON-CRICK A DT 4 A O4 DT 4 1_555 B DA 11 B N6 DA 11 1_555 hydrog WATSON-CRICK A DG 5 A N1 DG 5 1_555 B DC 10 B N3 DC 10 1_555 hydrog WATSON-CRICK A DG 5 A N2 DG 5 1_555 B DC 10 B O2 DC 10 1_555 hydrog WATSON-CRICK A DG 5 A O6 DG 5 1_555 B DC 10 B N4 DC 10 1_555 hydrog DG-DC PAIR A DG 5 A O6 DG 5 1_555 C DC 1 C N4 DC 1 1_555 hydrog WATSON-CRICK A DA 6 A N1 DA 6 1_555 B DT 9 B N3 DT 9 1_555 hydrog WATSON-CRICK A DA 6 A N6 DA 6 1_555 B DT 9 B O4 DT 9 1_555 hydrog HOOGSTEEN A DA 6 A N6 DA 6 1_555 C DT 2 C O4 DT 2 1_555 hydrog HOOGSTEEN A DA 6 A N7 DA 6 1_555 C DT 2 C N3 DT 2 1_555 hydrog WATSON-CRICK A DG 7 A N1 DG 7 1_555 B DC 8 B N3 DC 8 1_555 hydrog WATSON-CRICK A DG 7 A N2 DG 7 1_555 B DC 8 B O2 DC 8 1_555 hydrog WATSON-CRICK A DG 7 A O6 DG 7 1_555 B DC 8 B N4 DC 8 1_555 hydrog DG-DC PAIR A DG 7 A O6 DG 7 1_555 C DC 3 C N4 DC 3 1_555 hydrog WATSON-CRICK A DA 8 A N1 DA 8 1_555 B DT 7 B N3 DT 7 1_555 hydrog WATSON-CRICK A DA 8 A N6 DA 8 1_555 B DT 7 B O4 DT 7 1_555 hydrog HOOGSTEEN A DA 8 A N6 DA 8 1_555 C DT 4 C O4 DT 4 1_555 hydrog HOOGSTEEN A DA 8 A N7 DA 8 1_555 C DT 4 C N3 DT 4 1_555 hydrog WATSON-CRICK A DG 9 A N1 DG 9 1_555 B DC 6 B N3 DC 6 1_555 hydrog WATSON-CRICK A DG 9 A N2 DG 9 1_555 B DC 6 B O2 DC 6 1_555 hydrog WATSON-CRICK A DG 9 A O6 DG 9 1_555 B DC 6 B N4 DC 6 1_555 hydrog DG-DC PAIR A DG 9 A O6 DG 9 1_555 C DC 5 C N4 DC 5 1_555 hydrog WATSON-CRICK A DA 10 A N1 DA 10 1_555 B DT 5 B N3 DT 5 1_555 hydrog WATSON-CRICK A DA 10 A N6 DA 10 1_555 B DT 5 B O4 DT 5 1_555 hydrog HOOGSTEEN A DA 10 A N6 DA 10 1_555 C DT 6 C O4 DT 6 1_555 hydrog HOOGSTEEN A DA 10 A N7 DA 10 1_555 C DT 6 C N3 DT 6 1_555 hydrog WATSON-CRICK A DC 11 A N3 DC 11 1_555 B DG 4 B N1 DG 4 1_555 hydrog WATSON-CRICK A DC 11 A N4 DC 11 1_555 B DG 4 B O6 DG 4 1_555 hydrog WATSON-CRICK A DC 11 A O2 DC 11 1_555 B DG 4 B N2 DG 4 1_555 hydrog WATSON-CRICK A DG 12 A N1 DG 12 1_555 B DC 3 B N3 DC 3 1_555 hydrog WATSON-CRICK A DG 12 A N2 DG 12 1_555 B DC 3 B O2 DC 3 1_555 hydrog WATSON-CRICK A DG 12 A O6 DG 12 1_555 B DC 3 B N4 DC 3 1_555 hydrog DT-DT MISPAIR A DT 13 A O4 DT 13 1_555 B DT 1 B N3 DT 1 1_555 hydrog WATSON-CRICK A DT 13 A N3 DT 13 1_555 B DA 2 B N1 DA 2 1_555 hydrog WATSON-CRICK A DT 13 A O4 DT 13 1_555 B DA 2 B N6 DA 2 1_555 hydrog WATSON-CRICK A DA 14 A N1 DA 14 1_555 B DT 1 B N3 DT 1 1_555 hydrog WATSON-CRICK A DA 14 A N6 DA 14 1_555 B DT 1 B O4 DT 1 1_555 hydrog DC-DT MISPAIR B DC 8 B N4 DC 8 1_555 C DT 2 C O4 DT 2 1_555 hydrog DT-DC MISPAIR B DT 9 B O4 DT 9 1_555 C DC 1 C N4 DC 1 1_555 DNA DEOXYRIBONUCLEIC ACID, DNA TRIPLEX, TRIPLEX-DUPLEX JUNCTIONS, DNA 1BWG PDB 1 1BWG 1BWG PDB 2 1BWG 1BWG PDB 3 1BWG 1 14 1BWG 1 14 1BWG A 1 1 14 1 14 1BWG 1 14 1BWG B 2 1 14 1 6 1BWG 1 6 1BWG C 3 1 6 1 P 1