0.030637
0.000000
0.000000
0.000000
0.015168
0.000000
0.000000
0.000000
0.014743
0.00000
0.00000
0.00000
Unge, J.
Aberg, A.
Al-Karadaghi, S.
Nikulin, A.
Nikonov, S.
Davydova, N.
Nevskaya, N.
Garber, M.
Liljas, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
90.00
90.00
32.640
65.930
67.830
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cl -1
35.453
CHLORIDE ION
non-polymer
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H11 N O2 Se
196.106
n
SELENOMETHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Structure
STRUE6
2005
0969-2126
6
1577
1586
10.1016/S0969-2126(98)00155-5
9862810
The crystal structure of ribosomal protein L22 from Thermus thermophilus: insights into the mechanism of erythromycin resistance.
1998
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
287
1
MIRRORS
IMAGE PLATE
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.012
1.0
I711
MAX II
1.012
SYNCHROTRON
MAX II BEAMLINE I711
12901.846
PROTEIN (RIBOSOMAL PROTEIN L22)
MET1MSE, MET64MSE
1
man
polymer
35.453
CHLORIDE ION
3
syn
non-polymer
18.015
water
63
nat
water
no
yes
(MSE)EAKAIARYVRISPRKVRLVVDLIRGKSLEEARNILRYTNKRGAYFVAKVLESAAANAVNNHD(MSE)LEDRLYVK
AAYVDEGPALKRVLPRARGRADIIKKRTSHITVILGEKHGK
MEAKAIARYVRISPRKVRLVVDLIRGKSLEEARNILRYTNKRGAYFVAKVLESAAANAVNNHDMLEDRLYVKAAYVDEGP
ALKRVLPRARGRADIIKKRTSHITVILGEKHGK
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Thermus
Escherichia
sample
RIBOSOME
274
Thermus thermophilus
562
Escherichia coli
1
2.83
56.50
7
pH 7
diffrn_source
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
1998-10-07
1
1
2008-04-27
1
2
2011-07-13
1
3
2018-03-07
1
4
2018-03-14
_diffrn_source.pdbx_synchrotron_site
_struct_ref_seq_dif.details
BNL
Y
RCSB
1998-10-02
REL
REL
CL
CHLORIDE ION
HOH
water
CL
901
2
CL
CL
901
A
CL
902
2
CL
CL
902
A
CL
903
2
CL
CL
903
A
HOH
200
3
HOH
HOH
200
A
HOH
201
3
HOH
HOH
201
A
HOH
202
3
HOH
HOH
202
A
HOH
203
3
HOH
HOH
203
A
HOH
204
3
HOH
HOH
204
A
HOH
205
3
HOH
HOH
205
A
HOH
206
3
HOH
HOH
206
A
HOH
207
3
HOH
HOH
207
A
HOH
208
3
HOH
HOH
208
A
HOH
209
3
HOH
HOH
209
A
HOH
210
3
HOH
HOH
210
A
HOH
211
3
HOH
HOH
211
A
HOH
212
3
HOH
HOH
212
A
HOH
213
3
HOH
HOH
213
A
HOH
214
3
HOH
HOH
214
A
HOH
215
3
HOH
HOH
215
A
HOH
216
3
HOH
HOH
216
A
HOH
217
3
HOH
HOH
217
A
HOH
218
3
HOH
HOH
218
A
HOH
219
3
HOH
HOH
219
A
HOH
220
3
HOH
HOH
220
A
HOH
222
3
HOH
HOH
222
A
HOH
223
3
HOH
HOH
223
A
HOH
224
3
HOH
HOH
224
A
HOH
226
3
HOH
HOH
226
A
HOH
228
3
HOH
HOH
228
A
HOH
229
3
HOH
HOH
229
A
HOH
230
3
HOH
HOH
230
A
HOH
232
3
HOH
HOH
232
A
HOH
234
3
HOH
HOH
234
A
HOH
235
3
HOH
HOH
235
A
HOH
237
3
HOH
HOH
237
A
HOH
238
3
HOH
HOH
238
A
HOH
240
3
HOH
HOH
240
A
HOH
241
3
HOH
HOH
241
A
HOH
242
3
HOH
HOH
242
A
HOH
243
3
HOH
HOH
243
A
HOH
245
3
HOH
HOH
245
A
HOH
246
3
HOH
HOH
246
A
HOH
247
3
HOH
HOH
247
A
HOH
248
3
HOH
HOH
248
A
HOH
249
3
HOH
HOH
249
A
HOH
250
3
HOH
HOH
250
A
HOH
252
3
HOH
HOH
252
A
HOH
253
3
HOH
HOH
253
A
HOH
254
3
HOH
HOH
254
A
HOH
255
3
HOH
HOH
255
A
HOH
256
3
HOH
HOH
256
A
HOH
257
3
HOH
HOH
257
A
HOH
259
3
HOH
HOH
259
A
HOH
260
3
HOH
HOH
260
A
HOH
262
3
HOH
HOH
262
A
HOH
263
3
HOH
HOH
263
A
HOH
264
3
HOH
HOH
264
A
HOH
267
3
HOH
HOH
267
A
HOH
269
3
HOH
HOH
269
A
HOH
270
3
HOH
HOH
270
A
HOH
271
3
HOH
HOH
271
A
HOH
272
3
HOH
HOH
272
A
HOH
273
3
HOH
HOH
273
A
HOH
276
3
HOH
HOH
276
A
HOH
277
3
HOH
HOH
277
A
HOH
278
3
HOH
HOH
278
A
MSE
1
n
1
MSE
1
A
GLU
2
n
2
GLU
2
A
ALA
3
n
3
ALA
3
A
LYS
4
n
4
LYS
4
A
ALA
5
n
5
ALA
5
A
ILE
6
n
6
ILE
6
A
ALA
7
n
7
ALA
7
A
ARG
8
n
8
ARG
8
A
TYR
9
n
9
TYR
9
A
VAL
10
n
10
VAL
10
A
ARG
11
n
11
ARG
11
A
ILE
12
n
12
ILE
12
A
SER
13
n
13
SER
13
A
PRO
14
n
14
PRO
14
A
ARG
15
n
15
ARG
15
A
LYS
16
n
16
LYS
16
A
VAL
17
n
17
VAL
17
A
ARG
18
n
18
ARG
18
A
LEU
19
n
19
LEU
19
A
VAL
20
n
20
VAL
20
A
VAL
21
n
21
VAL
21
A
ASP
22
n
22
ASP
22
A
LEU
23
n
23
LEU
23
A
ILE
24
n
24
ILE
24
A
ARG
25
n
25
ARG
25
A
GLY
26
n
26
GLY
26
A
LYS
27
n
27
LYS
27
A
SER
28
n
28
SER
28
A
LEU
29
n
29
LEU
29
A
GLU
30
n
30
GLU
30
A
GLU
31
n
31
GLU
31
A
ALA
32
n
32
ALA
32
A
ARG
33
n
33
ARG
33
A
ASN
34
n
34
ASN
34
A
ILE
35
n
35
ILE
35
A
LEU
36
n
36
LEU
36
A
ARG
37
n
37
ARG
37
A
TYR
38
n
38
TYR
38
A
THR
39
n
39
THR
39
A
ASN
40
n
40
ASN
40
A
LYS
41
n
41
LYS
41
A
ARG
42
n
42
ARG
42
A
GLY
43
n
43
GLY
43
A
ALA
44
n
44
ALA
44
A
TYR
45
n
45
TYR
45
A
PHE
46
n
46
PHE
46
A
VAL
47
n
47
VAL
47
A
ALA
48
n
48
ALA
48
A
LYS
49
n
49
LYS
49
A
VAL
50
n
50
VAL
50
A
LEU
51
n
51
LEU
51
A
GLU
52
n
52
GLU
52
A
SER
53
n
53
SER
53
A
ALA
54
n
54
ALA
54
A
ALA
55
n
55
ALA
55
A
ALA
56
n
56
ALA
56
A
ASN
57
n
57
ASN
57
A
ALA
58
n
58
ALA
58
A
VAL
59
n
59
VAL
59
A
ASN
60
n
60
ASN
60
A
ASN
61
n
61
ASN
61
A
HIS
62
n
62
HIS
62
A
ASP
63
n
63
ASP
63
A
MSE
64
n
64
MSE
64
A
LEU
65
n
65
LEU
65
A
GLU
66
n
66
GLU
66
A
ASP
67
n
67
ASP
67
A
ARG
68
n
68
ARG
68
A
LEU
69
n
69
LEU
69
A
TYR
70
n
70
TYR
70
A
VAL
71
n
71
VAL
71
A
LYS
72
n
72
LYS
72
A
ALA
73
n
73
ALA
73
A
ALA
74
n
74
ALA
74
A
TYR
75
n
75
TYR
75
A
VAL
76
n
76
VAL
76
A
ASP
77
n
77
ASP
77
A
GLU
78
n
78
GLU
78
A
GLY
79
n
79
GLY
79
A
PRO
80
n
80
PRO
80
A
ALA
81
n
81
ALA
81
A
LEU
82
n
82
LEU
82
A
LYS
83
n
83
LYS
83
A
ARG
84
n
84
ARG
84
A
VAL
85
n
85
VAL
85
A
LEU
86
n
86
LEU
86
A
PRO
87
n
87
PRO
87
A
ARG
88
n
88
ARG
88
A
ALA
89
n
89
ALA
89
A
ARG
90
n
90
ARG
90
A
GLY
91
n
91
GLY
91
A
ARG
92
n
92
ARG
92
A
ALA
93
n
93
ALA
93
A
ASP
94
n
94
ASP
94
A
ILE
95
n
95
ILE
95
A
ILE
96
n
96
ILE
96
A
LYS
97
n
97
LYS
97
A
LYS
98
n
98
LYS
98
A
ARG
99
n
99
ARG
99
A
THR
100
n
100
THR
100
A
SER
101
n
101
SER
101
A
HIS
102
n
102
HIS
102
A
ILE
103
n
103
ILE
103
A
THR
104
n
104
THR
104
A
VAL
105
n
105
VAL
105
A
ILE
106
n
106
ILE
106
A
LEU
107
n
107
LEU
107
A
GLY
108
n
108
GLY
108
A
GLU
109
n
109
GLU
109
A
LYS
110
n
110
LYS
110
A
n
111
111
A
n
112
112
A
n
113
113
A
author_defined_assembly
1
monomeric
A
MSE
1
SELENOMETHIONINE
A
MSE
1
MET
A
MSE
64
SELENOMETHIONINE
A
MSE
64
MET
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LEU
82
A
O
LEU
82
A
N
LYS
98
A
N
LYS
98
1
A
HIS
111
A
HIS
111
1
Y
1
A
GLY
112
A
GLY
112
1
Y
1
A
LYS
113
A
LYS
113
1
Y
1
A
A
O
O
HOH
HOH
263
273
2.01
PROTEIN_REP.PARAM
TOPHCSDX.PRO
PARAMETER.ELEMENTS
PARAM19.SOL
20.3
0.2190000
0.1890000
0.1890000
1.9
10
15976
10
98
RANDOM
1
THROUGHOUT
0.0
MIR
1.9
10
63
948
3
0
882
0.008
1.34
26.32
0.71
0.3100000
0.2600000
1.99
69
1336
8
97.1
1.9
20.0
1BXE
12173
0
0.0530000
1
4.2
98
0.1590000
1.9
1.93
94.8
model building
CCP4
refinement
X-PLOR
3.851
data reduction
DENZO
data scaling
SCALEPACK
phasing
CCP4
PROTEIN (RIBOSOMAL PROTEIN L22) MUTANT (RESIDES MET1MSE MET64MSE)
RIBOSOMAL PROTEIN L22 FROM THERMUS THERMOPHILUS
1
N
N
2
N
N
2
N
N
2
N
N
3
N
N
A
PRO
14
A
PRO
14
HELX_P
A
ILE
24
A
ILE
24
1
1
11
A
LEU
29
A
LEU
29
HELX_P
A
TYR
38
A
TYR
38
1
2
10
A
ALA
44
A
ALA
44
HELX_P
A
ASN
60
A
ASN
60
1
3
17
A
GLU
66
A
GLU
66
HELX_P
A
ARG
68
A
ARG
68
5
4
3
covale
1.329
A
MSE
1
A
C
MSE
1
1_555
A
GLU
2
A
N
GLU
2
1_555
covale
1.329
A
ASP
63
A
C
ASP
63
1_555
A
MSE
64
A
N
MSE
64
1_555
covale
1.330
A
MSE
64
A
C
MSE
64
1_555
A
LEU
65
A
N
LEU
65
1_555
RNA BINDING PROTEIN
RIBOSOMAL PROTEIN, PROTEIN SYNTHESIS, RNA BINDING, ANTIBIOTICS RESISTANCE, RNA BINDING PROTEIN
RL22_THETH
UNP
1
P48286
1
113
1BXE
1
113
P48286
A
1
1
113
1
MET
ENGINEERED MUTATION
MSE
1
1BXE
A
P48286
UNP
1
1
1
MET
ENGINEERED MUTATION
MSE
64
1BXE
A
P48286
UNP
64
64
2
anti-parallel
A
LEU
82
A
LEU
82
A
LEU
86
A
LEU
86
A
ASP
94
A
ASP
94
A
LYS
98
A
LYS
98
BINDING SITE FOR RESIDUE CL A 901
Software
5
BINDING SITE FOR RESIDUE CL A 902
Software
3
BINDING SITE FOR RESIDUE CL A 903
Software
3
A
ARG
18
A
ARG
18
5
1_555
A
TYR
75
A
TYR
75
5
1_555
A
VAL
76
A
VAL
76
5
1_555
A
ARG
88
A
ARG
88
5
3_656
A
GLY
91
A
GLY
91
5
3_656
A
ARG
18
A
ARG
18
3
1_555
A
GLU
66
A
GLU
66
3
2_665
A
ARG
88
A
ARG
88
3
3_656
A
ARG
8
A
ARG
8
3
1_555
A
TYR
9
A
TYR
9
3
1_555
A
HIS
102
A
HIS
102
3
1_555
19
P 21 21 21