0.010435
0.000000
0.004953
0.000000
0.021537
0.000000
0.000000
0.000000
0.016981
0.00000
0.00000
0.00000
Parrish, J.C.
Khan, A.R.
Fraser, M.E.
Smith, W.W.
Bartlett, P.A.
James, M.N.G.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
115.39
90.00
95.829
46.431
65.186
C2 H3 O2 -1
59.044
ACETATE ION
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C3 H8 O3
92.094
GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C6 H12 O6
180.156
alpha-D-mannopyranose
alpha-D-mannose; D-mannose; mannose
D-saccharide, alpha linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C29 H47 N4 O9 P
626.679
2-[(1R)-1-(N-(3-METHYLBUTANOYL)-L-VALYL-L-ASPARAGINYL)-AMINO)-3-METHYLBUTYL]HYDROXYPHOSPHINYLOXY]-3-PHENYLPROPANOIC ACID METHYLESTER
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
O
N
3
N
O
N
4
N
C
N
5
N
H
N
6
N
H
N
7
N
H
N
8
N
N
N
9
S
C
N
10
N
C
N
11
N
O
N
12
N
C
N
13
N
O
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
N
N
22
S
C
N
23
N
C
N
24
N
O
N
25
N
C
N
26
N
C
N
27
N
O
N
28
N
N
N
29
N
O
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
N
N
39
S
C
N
40
N
C
N
41
N
O
N
42
N
C
N
43
N
C
N
44
N
O
N
45
N
O
N
46
N
O
N
47
N
H
N
48
N
H
N
49
N
H
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
N
N
55
R
C
N
56
N
C
N
57
N
O
N
58
N
C
N
59
N
S
N
60
N
O
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
N
N
69
S
C
N
70
N
C
N
71
N
O
N
72
N
C
N
73
N
C
N
74
N
C
N
75
N
O
N
76
N
N
N
77
N
O
N
78
N
H
N
79
N
H
N
80
N
H
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
O
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
N
N
108
N
C
N
109
N
C
N
110
N
O
N
111
N
O
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
C
N
118
N
O
N
119
N
C
N
120
N
O
N
121
N
C
N
122
N
O
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
N
N
132
S
C
N
133
N
C
N
134
N
O
N
135
N
C
Y
136
N
C
Y
137
N
N
Y
138
N
C
Y
139
N
C
Y
140
N
N
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
O
N
153
N
H
N
154
N
H
N
155
N
N
N
156
S
C
N
157
N
C
N
158
N
O
N
159
S
C
N
160
N
C
N
161
N
C
N
162
N
C
N
163
N
O
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
N
N
178
S
C
N
179
N
C
N
180
N
O
N
181
N
C
N
182
N
C
N
183
N
C
N
184
N
C
N
185
N
O
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
H
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
N
N
200
S
C
N
201
N
C
N
202
N
O
N
203
N
C
N
204
N
C
N
205
N
C
N
206
N
C
N
207
N
N
N
208
N
O
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
H
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
S
C
N
225
S
C
N
226
S
C
N
227
S
C
N
228
R
C
N
229
N
C
N
230
N
O
N
231
N
O
N
232
N
O
N
233
N
O
N
234
N
O
N
235
N
O
N
236
N
H
N
237
N
H
N
238
N
H
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
N
N
249
S
C
N
250
N
C
N
251
N
O
N
252
N
C
Y
253
N
C
Y
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
N
259
N
O
N
260
N
H
N
261
N
H
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
N
N
272
N
C
N
273
S
C
N
274
N
C
N
275
N
C
N
276
N
C
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
C
N
281
N
C
N
282
N
O
N
283
N
O
N
284
N
N
N
285
S
C
N
286
N
C
N
287
N
C
N
288
N
O
N
289
N
N
N
290
N
C
N
291
N
O
N
292
N
N
N
293
R
C
N
294
N
C
N
295
N
C
N
296
N
C
N
297
N
C
N
298
S
P
N
299
N
O
N
300
N
O
N
301
N
O
N
302
S
C
N
303
N
C
N
304
N
C
Y
305
N
C
Y
306
N
C
Y
307
N
C
Y
308
N
C
Y
309
N
C
Y
310
N
C
N
311
N
C
N
312
N
O
N
313
N
O
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
H
N
346
N
H
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
N
N
362
S
C
N
363
N
C
N
364
N
O
N
365
N
C
N
366
N
C
N
367
N
C
N
368
N
O
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
N
N
379
S
C
N
380
N
C
N
381
N
O
N
382
N
C
N
383
N
O
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
S
N
393
N
O
N
394
N
O
N
395
N
O
N
396
N
O
N
397
N
N
N
398
S
C
N
399
N
C
N
400
N
O
N
401
R
C
N
402
N
O
N
403
N
C
N
404
N
O
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
N
N
415
S
C
N
416
N
C
N
417
N
O
N
418
N
C
Y
419
N
C
Y
420
N
C
Y
421
N
C
Y
422
N
N
Y
423
N
C
Y
424
N
C
Y
425
N
C
Y
426
N
C
Y
427
N
C
N
428
N
O
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
N
N
442
S
C
N
443
N
C
N
444
N
O
N
445
N
C
Y
446
N
C
Y
447
N
C
Y
448
N
C
Y
449
N
C
Y
450
N
C
Y
451
N
C
N
452
N
O
N
453
N
O
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
463
N
H
N
464
N
H
N
465
N
N
N
466
S
C
N
467
N
C
N
468
N
O
N
469
N
C
N
470
N
C
N
471
N
C
N
472
N
O
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
479
N
H
N
480
N
H
N
481
N
H
N
482
N
H
N
483
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
doub
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
doub
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
doub
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
doub
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
doub
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
doub
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
doub
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
Y
133
N
sing
Y
134
N
doub
Y
135
N
doub
N
136
N
sing
Y
137
N
sing
N
138
N
sing
Y
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
doub
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
doub
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
doub
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
doub
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
Y
246
N
doub
Y
247
N
sing
Y
248
N
sing
N
249
N
sing
Y
250
N
doub
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
doub
N
287
N
doub
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
N
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
doub
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
doub
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
Y
335
N
doub
Y
336
N
sing
Y
337
N
sing
N
338
N
sing
Y
339
N
doub
N
340
N
sing
Y
341
N
doub
N
342
N
sing
Y
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
doub
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
doub
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
doub
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
doub
N
379
N
doub
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
doub
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
sing
N
403
N
sing
N
404
N
doub
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
Y
409
N
doub
Y
410
N
sing
Y
411
N
sing
N
412
N
sing
Y
413
N
doub
Y
414
N
sing
Y
415
N
sing
N
416
N
sing
Y
417
N
sing
Y
418
N
doub
N
419
N
sing
Y
420
N
doub
N
421
N
sing
Y
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
doub
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
sing
Y
437
N
doub
Y
438
N
sing
Y
439
N
sing
N
440
N
sing
Y
441
N
doub
N
442
N
sing
Y
443
N
doub
N
444
N
sing
Y
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
sing
N
455
N
sing
N
456
N
doub
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
N
466
N
sing
N
467
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
37
16839
16845
10.1021/bi9821364
9836576
Lowering the entropic barrier for binding conformationally flexible inhibitors to enzymes.
1998
US
J.Am.Chem.Soc.
JACSAT
0004
0002-7863
120
4622
Macrocyclic Inhibitors of Penicillopepsin. 3. Design, Synthesis, and Evaluation of an Inhibitor Bridged between P2 and P1'
1998
US
J.Am.Chem.Soc.
JACSAT
0004
0002-7863
120
4610
Macrocyclic Inhibitors of Penicillopepsin. 2.X-Ray Crystallographic Analyses of Penicillopepsin Complexed with a P3-P1 Macrocyclic Peptidyl Inhibitor and with its Two Acyclic Analogues
1998
10.2210/pdb1bxq/pdb
pdb_00001bxq
MAN A 332 HAS WRONG CHIRALITY AT ATOM C4
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
AREA DETECTOR
1998-02-15
SIEMENS
GRAPHITE
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
33468.809
PROTEIN (PENICILLOPEPSIN)
3.4.23.20
1
nat
polymer
180.156
alpha-D-mannopyranose
2
man
non-polymer
96.063
SULFATE ION
2
syn
non-polymer
59.044
ACETATE ION
1
syn
non-polymer
626.679
2-[(1R)-1-(N-(3-METHYLBUTANOYL)-L-VALYL-L-ASPARAGINYL)-AMINO)-3-METHYLBUTYL]HYDROXYPHOSPHINYLOXY]-3-PHENYLPROPANOIC ACID METHYLESTER
1
syn
non-polymer
92.094
GLYCEROL
3
syn
non-polymer
18.015
water
405
nat
water
no
no
AASGVATNTPTANDEEYITPVTIGGTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATGKELSGYTWSISYGDGSS
ASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSSLAQPLFAVALKHQ
QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQDS
NAGGYVFDCSTNLPDFSVSISGYTATVPGSLINYGPSGDGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFA
PQA
AASGVATNTPTANDEEYITPVTIGGTTLNLNFDTGSADLWVFSTELPASQQSGHSVYNPSATGKELSGYTWSISYGDGSS
ASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSSLAQPLFAVALKHQ
QPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGSQSGDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQQDS
NAGGYVFDCSTNLPDFSVSISGYTATVPGSLINYGPSGDGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFA
PQA
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Penicillium
sample
5079
Penicillium janthinellum
1
1.51
18.4
4.6
0.1 M CH3COONA 35% SATD. AMMONIUM SULPHATE PH 4.6
software
chem_comp
database_PDB_caveat
entity
pdbx_chem_comp_identifier
pdbx_entity_nonpoly
struct_conn
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Non-polymer description
Version format compliance
Refinement description
Advisory
Data collection
Derived calculations
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
1998-10-14
1
1
2007-10-16
1
2
2011-07-13
1
3
2017-10-04
1
4
2020-07-29
1
5
2023-08-09
_chem_comp.name
_chem_comp.type
_entity.pdbx_description
_pdbx_entity_nonpoly.name
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_role
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
DManpa
a-D-mannopyranose
a-D-Manp
Man
BNL
Y
RCSB
1998-10-07
REL
REL
MAN
alpha-D-mannopyranose
SO4
SULFATE ION
ACT
ACETATE ION
PP8
2-[(1R)-1-(N-(3-METHYLBUTANOYL)-L-VALYL-L-ASPARAGINYL)-AMINO)-3-METHYLBUTYL]HYDROXYPHOSPHINYLOXY]-3-PHENYLPROPANOIC ACID METHYLESTER
GOL
GLYCEROL
HOH
water
1PPL
PDB
experimental model
MAN
331
2
MAN
MAN
331
A
MAN
332
2
MAN
MAN
332
A
SO4
325
3
SO4
SO4
325
A
SO4
326
3
SO4
SO4
326
A
ACT
330
4
ACT
ACT
330
A
PP8
324
5
PP8
PP8
324
A
GLL
327
6
GOL
GOL
327
A
GLL
328
6
GOL
GOL
328
A
GLL
329
6
GOL
GOL
329
A
HOH
400
7
HOH
HOH
400
A
HOH
401
7
HOH
HOH
401
A
HOH
402
7
HOH
HOH
402
A
HOH
403
7
HOH
HOH
403
A
HOH
404
7
HOH
HOH
404
A
HOH
405
7
HOH
HOH
405
A
HOH
406
7
HOH
HOH
406
A
HOH
407
7
HOH
HOH
407
A
HOH
408
7
HOH
HOH
408
A
HOH
409
7
HOH
HOH
409
A
HOH
410
7
HOH
HOH
410
A
HOH
411
7
HOH
HOH
411
A
HOH
412
7
HOH
HOH
412
A
HOH
413
7
HOH
HOH
413
A
HOH
414
7
HOH
HOH
414
A
HOH
415
7
HOH
HOH
415
A
HOH
416
7
HOH
HOH
416
A
HOH
417
7
HOH
HOH
417
A
HOH
418
7
HOH
HOH
418
A
HOH
419
7
HOH
HOH
419
A
HOH
420
7
HOH
HOH
420
A
HOH
421
7
HOH
HOH
421
A
HOH
422
7
HOH
HOH
422
A
HOH
423
7
HOH
HOH
423
A
HOH
424
7
HOH
HOH
424
A
HOH
425
7
HOH
HOH
425
A
HOH
426
7
HOH
HOH
426
A
HOH
427
7
HOH
HOH
427
A
HOH
428
7
HOH
HOH
428
A
HOH
429
7
HOH
HOH
429
A
HOH
430
7
HOH
HOH
430
A
HOH
431
7
HOH
HOH
431
A
HOH
432
7
HOH
HOH
432
A
HOH
433
7
HOH
HOH
433
A
HOH
434
7
HOH
HOH
434
A
HOH
435
7
HOH
HOH
435
A
HOH
436
7
HOH
HOH
436
A
HOH
437
7
HOH
HOH
437
A
HOH
438
7
HOH
HOH
438
A
HOH
439
7
HOH
HOH
439
A
HOH
440
7
HOH
HOH
440
A
HOH
441
7
HOH
HOH
441
A
HOH
442
7
HOH
HOH
442
A
HOH
443
7
HOH
HOH
443
A
HOH
444
7
HOH
HOH
444
A
HOH
445
7
HOH
HOH
445
A
HOH
446
7
HOH
HOH
446
A
HOH
447
7
HOH
HOH
447
A
HOH
448
7
HOH
HOH
448
A
HOH
449
7
HOH
HOH
449
A
HOH
450
7
HOH
HOH
450
A
HOH
451
7
HOH
HOH
451
A
HOH
452
7
HOH
HOH
452
A
HOH
453
7
HOH
HOH
453
A
HOH
454
7
HOH
HOH
454
A
HOH
455
7
HOH
HOH
455
A
HOH
456
7
HOH
HOH
456
A
HOH
457
7
HOH
HOH
457
A
HOH
458
7
HOH
HOH
458
A
HOH
459
7
HOH
HOH
459
A
HOH
460
7
HOH
HOH
460
A
HOH
461
7
HOH
HOH
461
A
HOH
462
7
HOH
HOH
462
A
HOH
463
7
HOH
HOH
463
A
HOH
464
7
HOH
HOH
464
A
HOH
465
7
HOH
HOH
465
A
HOH
466
7
HOH
HOH
466
A
HOH
467
7
HOH
HOH
467
A
HOH
468
7
HOH
HOH
468
A
HOH
469
7
HOH
HOH
469
A
HOH
470
7
HOH
HOH
470
A
HOH
471
7
HOH
HOH
471
A
HOH
472
7
HOH
HOH
472
A
HOH
473
7
HOH
HOH
473
A
HOH
474
7
HOH
HOH
474
A
HOH
475
7
HOH
HOH
475
A
HOH
476
7
HOH
HOH
476
A
HOH
477
7
HOH
HOH
477
A
HOH
478
7
HOH
HOH
478
A
HOH
479
7
HOH
HOH
479
A
HOH
480
7
HOH
HOH
480
A
HOH
481
7
HOH
HOH
481
A
HOH
482
7
HOH
HOH
482
A
HOH
483
7
HOH
HOH
483
A
HOH
484
7
HOH
HOH
484
A
HOH
485
7
HOH
HOH
485
A
HOH
486
7
HOH
HOH
486
A
HOH
487
7
HOH
HOH
487
A
HOH
488
7
HOH
HOH
488
A
HOH
489
7
HOH
HOH
489
A
HOH
490
7
HOH
HOH
490
A
HOH
491
7
HOH
HOH
491
A
HOH
492
7
HOH
HOH
492
A
HOH
493
7
HOH
HOH
493
A
HOH
494
7
HOH
HOH
494
A
HOH
495
7
HOH
HOH
495
A
HOH
496
7
HOH
HOH
496
A
HOH
497
7
HOH
HOH
497
A
HOH
498
7
HOH
HOH
498
A
HOH
499
7
HOH
HOH
499
A
HOH
500
7
HOH
HOH
500
A
HOH
501
7
HOH
HOH
501
A
HOH
502
7
HOH
HOH
502
A
HOH
503
7
HOH
HOH
503
A
HOH
504
7
HOH
HOH
504
A
HOH
505
7
HOH
HOH
505
A
HOH
506
7
HOH
HOH
506
A
HOH
507
7
HOH
HOH
507
A
HOH
508
7
HOH
HOH
508
A
HOH
509
7
HOH
HOH
509
A
HOH
510
7
HOH
HOH
510
A
HOH
511
7
HOH
HOH
511
A
HOH
512
7
HOH
HOH
512
A
HOH
513
7
HOH
HOH
513
A
HOH
514
7
HOH
HOH
514
A
HOH
515
7
HOH
HOH
515
A
HOH
516
7
HOH
HOH
516
A
HOH
517
7
HOH
HOH
517
A
HOH
518
7
HOH
HOH
518
A
HOH
519
7
HOH
HOH
519
A
HOH
520
7
HOH
HOH
520
A
HOH
521
7
HOH
HOH
521
A
HOH
522
7
HOH
HOH
522
A
HOH
523
7
HOH
HOH
523
A
HOH
524
7
HOH
HOH
524
A
HOH
525
7
HOH
HOH
525
A
HOH
526
7
HOH
HOH
526
A
HOH
527
7
HOH
HOH
527
A
HOH
528
7
HOH
HOH
528
A
HOH
529
7
HOH
HOH
529
A
HOH
530
7
HOH
HOH
530
A
HOH
531
7
HOH
HOH
531
A
HOH
532
7
HOH
HOH
532
A
HOH
533
7
HOH
HOH
533
A
HOH
534
7
HOH
HOH
534
A
HOH
535
7
HOH
HOH
535
A
HOH
536
7
HOH
HOH
536
A
HOH
537
7
HOH
HOH
537
A
HOH
538
7
HOH
HOH
538
A
HOH
539
7
HOH
HOH
539
A
HOH
540
7
HOH
HOH
540
A
HOH
541
7
HOH
HOH
541
A
HOH
542
7
HOH
HOH
542
A
HOH
543
7
HOH
HOH
543
A
HOH
544
7
HOH
HOH
544
A
HOH
545
7
HOH
HOH
545
A
HOH
546
7
HOH
HOH
546
A
HOH
547
7
HOH
HOH
547
A
HOH
548
7
HOH
HOH
548
A
HOH
549
7
HOH
HOH
549
A
HOH
550
7
HOH
HOH
550
A
HOH
551
7
HOH
HOH
551
A
HOH
552
7
HOH
HOH
552
A
HOH
553
7
HOH
HOH
553
A
HOH
554
7
HOH
HOH
554
A
HOH
555
7
HOH
HOH
555
A
HOH
556
7
HOH
HOH
556
A
HOH
557
7
HOH
HOH
557
A
HOH
558
7
HOH
HOH
558
A
HOH
559
7
HOH
HOH
559
A
HOH
560
7
HOH
HOH
560
A
HOH
561
7
HOH
HOH
561
A
HOH
562
7
HOH
HOH
562
A
HOH
563
7
HOH
HOH
563
A
HOH
564
7
HOH
HOH
564
A
HOH
565
7
HOH
HOH
565
A
HOH
566
7
HOH
HOH
566
A
HOH
567
7
HOH
HOH
567
A
HOH
568
7
HOH
HOH
568
A
HOH
569
7
HOH
HOH
569
A
HOH
570
7
HOH
HOH
570
A
HOH
571
7
HOH
HOH
571
A
HOH
572
7
HOH
HOH
572
A
HOH
573
7
HOH
HOH
573
A
HOH
574
7
HOH
HOH
574
A
HOH
575
7
HOH
HOH
575
A
HOH
576
7
HOH
HOH
576
A
HOH
577
7
HOH
HOH
577
A
HOH
578
7
HOH
HOH
578
A
HOH
579
7
HOH
HOH
579
A
HOH
580
7
HOH
HOH
580
A
HOH
581
7
HOH
HOH
581
A
HOH
582
7
HOH
HOH
582
A
HOH
583
7
HOH
HOH
583
A
HOH
584
7
HOH
HOH
584
A
HOH
585
7
HOH
HOH
585
A
HOH
586
7
HOH
HOH
586
A
HOH
587
7
HOH
HOH
587
A
HOH
588
7
HOH
HOH
588
A
HOH
589
7
HOH
HOH
589
A
HOH
590
7
HOH
HOH
590
A
HOH
591
7
HOH
HOH
591
A
HOH
592
7
HOH
HOH
592
A
HOH
593
7
HOH
HOH
593
A
HOH
594
7
HOH
HOH
594
A
HOH
595
7
HOH
HOH
595
A
HOH
596
7
HOH
HOH
596
A
HOH
597
7
HOH
HOH
597
A
HOH
598
7
HOH
HOH
598
A
HOH
599
7
HOH
HOH
599
A
HOH
600
7
HOH
HOH
600
A
HOH
601
7
HOH
HOH
601
A
HOH
602
7
HOH
HOH
602
A
HOH
603
7
HOH
HOH
603
A
HOH
604
7
HOH
HOH
604
A
HOH
605
7
HOH
HOH
605
A
HOH
606
7
HOH
HOH
606
A
HOH
607
7
HOH
HOH
607
A
HOH
608
7
HOH
HOH
608
A
HOH
609
7
HOH
HOH
609
A
HOH
610
7
HOH
HOH
610
A
HOH
611
7
HOH
HOH
611
A
HOH
612
7
HOH
HOH
612
A
HOH
613
7
HOH
HOH
613
A
HOH
614
7
HOH
HOH
614
A
HOH
615
7
HOH
HOH
615
A
HOH
616
7
HOH
HOH
616
A
HOH
617
7
HOH
HOH
617
A
HOH
618
7
HOH
HOH
618
A
HOH
619
7
HOH
HOH
619
A
HOH
620
7
HOH
HOH
620
A
HOH
621
7
HOH
HOH
621
A
HOH
622
7
HOH
HOH
622
A
HOH
623
7
HOH
HOH
623
A
HOH
624
7
HOH
HOH
624
A
HOH
625
7
HOH
HOH
625
A
HOH
626
7
HOH
HOH
626
A
HOH
627
7
HOH
HOH
627
A
HOH
628
7
HOH
HOH
628
A
HOH
629
7
HOH
HOH
629
A
HOH
630
7
HOH
HOH
630
A
HOH
631
7
HOH
HOH
631
A
HOH
632
7
HOH
HOH
632
A
HOH
633
7
HOH
HOH
633
A
HOH
634
7
HOH
HOH
634
A
HOH
635
7
HOH
HOH
635
A
HOH
636
7
HOH
HOH
636
A
HOH
637
7
HOH
HOH
637
A
HOH
638
7
HOH
HOH
638
A
HOH
639
7
HOH
HOH
639
A
HOH
640
7
HOH
HOH
640
A
HOH
641
7
HOH
HOH
641
A
HOH
642
7
HOH
HOH
642
A
HOH
643
7
HOH
HOH
643
A
HOH
644
7
HOH
HOH
644
A
HOH
645
7
HOH
HOH
645
A
HOH
646
7
HOH
HOH
646
A
HOH
647
7
HOH
HOH
647
A
HOH
648
7
HOH
HOH
648
A
HOH
649
7
HOH
HOH
649
A
HOH
650
7
HOH
HOH
650
A
HOH
651
7
HOH
HOH
651
A
HOH
652
7
HOH
HOH
652
A
HOH
653
7
HOH
HOH
653
A
HOH
654
7
HOH
HOH
654
A
HOH
655
7
HOH
HOH
655
A
HOH
656
7
HOH
HOH
656
A
HOH
657
7
HOH
HOH
657
A
HOH
658
7
HOH
HOH
658
A
HOH
659
7
HOH
HOH
659
A
HOH
660
7
HOH
HOH
660
A
HOH
661
7
HOH
HOH
661
A
HOH
662
7
HOH
HOH
662
A
HOH
663
7
HOH
HOH
663
A
HOH
664
7
HOH
HOH
664
A
HOH
665
7
HOH
HOH
665
A
HOH
666
7
HOH
HOH
666
A
HOH
667
7
HOH
HOH
667
A
HOH
668
7
HOH
HOH
668
A
HOH
669
7
HOH
HOH
669
A
HOH
670
7
HOH
HOH
670
A
HOH
671
7
HOH
HOH
671
A
HOH
672
7
HOH
HOH
672
A
HOH
673
7
HOH
HOH
673
A
HOH
674
7
HOH
HOH
674
A
HOH
675
7
HOH
HOH
675
A
HOH
676
7
HOH
HOH
676
A
HOH
677
7
HOH
HOH
677
A
HOH
678
7
HOH
HOH
678
A
HOH
679
7
HOH
HOH
679
A
HOH
680
7
HOH
HOH
680
A
HOH
681
7
HOH
HOH
681
A
HOH
682
7
HOH
HOH
682
A
HOH
683
7
HOH
HOH
683
A
HOH
684
7
HOH
HOH
684
A
HOH
685
7
HOH
HOH
685
A
HOH
686
7
HOH
HOH
686
A
HOH
687
7
HOH
HOH
687
A
HOH
688
7
HOH
HOH
688
A
HOH
689
7
HOH
HOH
689
A
HOH
690
7
HOH
HOH
690
A
HOH
691
7
HOH
HOH
691
A
HOH
692
7
HOH
HOH
692
A
HOH
693
7
HOH
HOH
693
A
HOH
694
7
HOH
HOH
694
A
HOH
695
7
HOH
HOH
695
A
HOH
696
7
HOH
HOH
696
A
HOH
697
7
HOH
HOH
697
A
HOH
698
7
HOH
HOH
698
A
HOH
699
7
HOH
HOH
699
A
HOH
700
7
HOH
HOH
700
A
HOH
701
7
HOH
HOH
701
A
HOH
702
7
HOH
HOH
702
A
HOH
703
7
HOH
HOH
703
A
HOH
704
7
HOH
HOH
704
A
HOH
705
7
HOH
HOH
705
A
HOH
706
7
HOH
HOH
706
A
HOH
707
7
HOH
HOH
707
A
HOH
708
7
HOH
HOH
708
A
HOH
709
7
HOH
HOH
709
A
HOH
710
7
HOH
HOH
710
A
HOH
711
7
HOH
HOH
711
A
HOH
712
7
HOH
HOH
712
A
HOH
713
7
HOH
HOH
713
A
HOH
714
7
HOH
HOH
714
A
HOH
715
7
HOH
HOH
715
A
HOH
716
7
HOH
HOH
716
A
HOH
717
7
HOH
HOH
717
A
HOH
718
7
HOH
HOH
718
A
HOH
719
7
HOH
HOH
719
A
HOH
720
7
HOH
HOH
720
A
HOH
721
7
HOH
HOH
721
A
HOH
722
7
HOH
HOH
722
A
HOH
723
7
HOH
HOH
723
A
HOH
724
7
HOH
HOH
724
A
HOH
725
7
HOH
HOH
725
A
HOH
726
7
HOH
HOH
726
A
HOH
727
7
HOH
HOH
727
A
HOH
728
7
HOH
HOH
728
A
HOH
729
7
HOH
HOH
729
A
HOH
730
7
HOH
HOH
730
A
HOH
731
7
HOH
HOH
731
A
HOH
732
7
HOH
HOH
732
A
HOH
733
7
HOH
HOH
733
A
HOH
734
7
HOH
HOH
734
A
HOH
735
7
HOH
HOH
735
A
HOH
736
7
HOH
HOH
736
A
HOH
737
7
HOH
HOH
737
A
HOH
738
7
HOH
HOH
738
A
HOH
739
7
HOH
HOH
739
A
HOH
740
7
HOH
HOH
740
A
HOH
741
7
HOH
HOH
741
A
HOH
742
7
HOH
HOH
742
A
HOH
743
7
HOH
HOH
743
A
HOH
744
7
HOH
HOH
744
A
HOH
745
7
HOH
HOH
745
A
HOH
746
7
HOH
HOH
746
A
HOH
747
7
HOH
HOH
747
A
HOH
748
7
HOH
HOH
748
A
HOH
749
7
HOH
HOH
749
A
HOH
750
7
HOH
HOH
750
A
HOH
751
7
HOH
HOH
751
A
HOH
752
7
HOH
HOH
752
A
HOH
753
7
HOH
HOH
753
A
HOH
754
7
HOH
HOH
754
A
HOH
755
7
HOH
HOH
755
A
HOH
756
7
HOH
HOH
756
A
HOH
757
7
HOH
HOH
757
A
HOH
758
7
HOH
HOH
758
A
HOH
759
7
HOH
HOH
759
A
HOH
760
7
HOH
HOH
760
A
HOH
761
7
HOH
HOH
761
A
HOH
762
7
HOH
HOH
762
A
HOH
763
7
HOH
HOH
763
A
HOH
764
7
HOH
HOH
764
A
HOH
765
7
HOH
HOH
765
A
HOH
766
7
HOH
HOH
766
A
HOH
767
7
HOH
HOH
767
A
HOH
768
7
HOH
HOH
768
A
HOH
769
7
HOH
HOH
769
A
HOH
770
7
HOH
HOH
770
A
HOH
771
7
HOH
HOH
771
A
HOH
772
7
HOH
HOH
772
A
HOH
773
7
HOH
HOH
773
A
HOH
774
7
HOH
HOH
774
A
HOH
775
7
HOH
HOH
775
A
HOH
776
7
HOH
HOH
776
A
HOH
777
7
HOH
HOH
777
A
HOH
778
7
HOH
HOH
778
A
HOH
779
7
HOH
HOH
779
A
HOH
780
7
HOH
HOH
780
A
HOH
781
7
HOH
HOH
781
A
HOH
782
7
HOH
HOH
782
A
HOH
783
7
HOH
HOH
783
A
HOH
784
7
HOH
HOH
784
A
HOH
785
7
HOH
HOH
785
A
HOH
786
7
HOH
HOH
786
A
HOH
787
7
HOH
HOH
787
A
HOH
788
7
HOH
HOH
788
A
HOH
789
7
HOH
HOH
789
A
HOH
790
7
HOH
HOH
790
A
HOH
791
7
HOH
HOH
791
A
HOH
792
7
HOH
HOH
792
A
HOH
793
7
HOH
HOH
793
A
HOH
794
7
HOH
HOH
794
A
HOH
795
7
HOH
HOH
795
A
HOH
796
7
HOH
HOH
796
A
HOH
797
7
HOH
HOH
797
A
HOH
798
7
HOH
HOH
798
A
HOH
799
7
HOH
HOH
799
A
HOH
800
7
HOH
HOH
800
A
HOH
826
7
HOH
HOH
826
A
HOH
827
7
HOH
HOH
827
A
HOH
828
7
HOH
HOH
828
A
HOH
829
7
HOH
HOH
829
A
ALA
1
n
1
ALA
1
A
ALA
2
n
2
ALA
2
A
SER
3
n
3
SER
3
A
GLY
4
n
4
GLY
4
A
VAL
5
n
5
VAL
5
A
ALA
6
n
6
ALA
6
A
THR
7
n
7
THR
7
A
ASN
8
n
8
ASN
8
A
THR
9
n
9
THR
9
A
PRO
10
n
10
PRO
10
A
THR
11
n
11
THR
11
A
ALA
12
n
12
ALA
12
A
ASN
13
n
13
ASN
13
A
ASP
14
n
14
ASP
14
A
GLU
15
n
15
GLU
15
A
GLU
16
n
16
GLU
16
A
TYR
17
n
17
TYR
17
A
ILE
18
n
18
ILE
18
A
THR
19
n
19
THR
19
A
PRO
20
n
20
PRO
20
A
VAL
21
n
21
VAL
21
A
THR
22
n
22
THR
22
A
ILE
23
n
23
ILE
23
A
GLY
24
n
24
GLY
24
A
GLY
25
n
25
GLY
25
A
THR
26
n
26
THR
26
A
THR
27
n
27
THR
27
A
LEU
28
n
28
LEU
28
A
ASN
29
n
29
ASN
29
A
LEU
30
n
30
LEU
30
A
ASN
31
n
31
ASN
31
A
PHE
32
n
32
PHE
32
A
ASP
33
n
33
ASP
33
A
THR
34
n
34
THR
34
A
GLY
35
n
35
GLY
35
A
SER
36
n
36
SER
36
A
ALA
37
n
37
ALA
37
A
ASP
38
n
38
ASP
38
A
LEU
39
n
39
LEU
39
A
TRP
40
n
40
TRP
40
A
VAL
41
n
41
VAL
41
A
PHE
42
n
42
PHE
42
A
SER
43
n
43
SER
43
A
THR
44
n
44
THR
44
A
GLU
45
n
45
GLU
45
A
LEU
46
n
46
LEU
46
A
PRO
47
n
47
PRO
47
A
ALA
48
n
48
ALA
48
A
SER
49
n
49
SER
49
A
GLN
50
n
50
GLN
50
A
GLN
51
n
51
GLN
51
A
SER
52
n
52
SER
52
A
GLY
53
n
53
GLY
53
A
HIS
54
n
54
HIS
54
A
SER
55
n
55
SER
55
A
VAL
56
n
56
VAL
56
A
TYR
57
n
57
TYR
57
A
ASN
58
n
58
ASN
58
A
PRO
59
n
59
PRO
59
A
SER
60
n
60
SER
60
A
ALA
61
n
61
ALA
61
A
THR
62
n
62
THR
62
A
GLY
63
n
63
GLY
63
A
LYS
64
n
64
LYS
64
A
GLU
65
n
65
GLU
65
A
LEU
66
n
66
LEU
66
A
SER
67
n
67
SER
67
A
GLY
68
n
68
GLY
68
A
TYR
69
n
69
TYR
69
A
THR
70
n
70
THR
70
A
TRP
71
n
71
TRP
71
A
SER
72
n
72
SER
72
A
ILE
73
n
73
ILE
73
A
SER
74
n
74
SER
74
A
TYR
75
n
75
TYR
75
A
GLY
76
n
76
GLY
76
A
ASP
77
n
77
ASP
77
A
GLY
78
n
78
GLY
78
A
SER
79
n
79
SER
79
A
SER
80
n
80
SER
80
A
ALA
81
n
81
ALA
81
A
SER
82
n
82
SER
82
A
GLY
83
n
83
GLY
83
A
ASN
84
n
84
ASN
84
A
VAL
85
n
85
VAL
85
A
PHE
86
n
86
PHE
86
A
THR
87
n
87
THR
87
A
ASP
88
n
88
ASP
88
A
SER
89
n
89
SER
89
A
VAL
90
n
90
VAL
90
A
THR
91
n
91
THR
91
A
VAL
92
n
92
VAL
92
A
GLY
93
n
93
GLY
93
A
GLY
94
n
94
GLY
94
A
VAL
95
n
95
VAL
95
A
THR
96
n
96
THR
96
A
ALA
97
n
97
ALA
97
A
HIS
98
n
98
HIS
98
A
GLY
99
n
99
GLY
99
A
GLN
100
n
100
GLN
100
A
ALA
101
n
101
ALA
101
A
VAL
102
n
102
VAL
102
A
GLN
103
n
103
GLN
103
A
ALA
104
n
104
ALA
104
A
ALA
105
n
105
ALA
105
A
GLN
106
n
106
GLN
106
A
GLN
107
n
107
GLN
107
A
ILE
108
n
108
ILE
108
A
SER
109
n
109
SER
109
A
ALA
110
n
110
ALA
110
A
GLN
111
n
111
GLN
111
A
PHE
112
n
112
PHE
112
A
GLN
113
n
113
GLN
113
A
GLN
114
n
114
GLN
114
A
ASP
115
n
115
ASP
115
A
THR
116
n
116
THR
116
A
ASN
117
n
117
ASN
117
A
ASN
118
n
118
ASN
118
A
ASP
119
n
119
ASP
119
A
GLY
120
n
120
GLY
120
A
LEU
121
n
121
LEU
121
A
LEU
122
n
122
LEU
122
A
GLY
123
n
123
GLY
123
A
LEU
124
n
124
LEU
124
A
ALA
125
n
125
ALA
125
A
PHE
126
n
126
PHE
126
A
SER
127
n
127
SER
127
A
SER
128
n
128
SER
128
A
ILE
129
n
129
ILE
129
A
ASN
130
n
130
ASN
130
A
THR
131
n
131
THR
131
A
VAL
132
n
132
VAL
132
A
GLN
133
n
133
GLN
133
A
PRO
134
n
134
PRO
134
A
GLN
135
n
135
GLN
135
A
SER
136
n
136
SER
136
A
GLN
137
n
137
GLN
137
A
THR
138
n
138
THR
138
A
THR
139
n
139
THR
139
A
PHE
140
n
140
PHE
140
A
PHE
141
n
141
PHE
141
A
ASP
142
n
142
ASP
142
A
THR
143
n
143
THR
143
A
VAL
144
n
144
VAL
144
A
LYS
145
n
145
LYS
145
A
SER
146
n
146
SER
146
A
SER
147
n
147
SER
147
A
LEU
148
n
148
LEU
148
A
ALA
149
n
149
ALA
149
A
GLN
150
n
150
GLN
150
A
PRO
151
n
151
PRO
151
A
LEU
152
n
152
LEU
152
A
PHE
153
n
153
PHE
153
A
ALA
154
n
154
ALA
154
A
VAL
155
n
155
VAL
155
A
ALA
156
n
156
ALA
156
A
LEU
157
n
157
LEU
157
A
LYS
158
n
158
LYS
158
A
HIS
159
n
159
HIS
159
A
GLN
160
n
160
GLN
160
A
GLN
161
n
161
GLN
161
A
PRO
162
n
162
PRO
162
A
GLY
163
n
163
GLY
163
A
VAL
164
n
164
VAL
164
A
TYR
165
n
165
TYR
165
A
ASP
166
n
166
ASP
166
A
PHE
167
n
167
PHE
167
A
GLY
168
n
168
GLY
168
A
PHE
169
n
169
PHE
169
A
ILE
170
n
170
ILE
170
A
ASP
171
n
171
ASP
171
A
SER
172
n
172
SER
172
A
SER
173
n
173
SER
173
A
LYS
174
n
174
LYS
174
A
TYR
175
n
175
TYR
175
A
THR
176
n
176
THR
176
A
GLY
177
n
177
GLY
177
A
SER
178
n
178
SER
178
A
LEU
179
n
179
LEU
179
A
THR
180
n
180
THR
180
A
TYR
181
n
181
TYR
181
A
THR
182
n
182
THR
182
A
GLY
183
n
183
GLY
183
A
VAL
184
n
184
VAL
184
A
ASP
185
n
185
ASP
185
A
ASN
186
n
186
ASN
186
A
SER
187
n
187
SER
187
A
GLN
188
n
188
GLN
188
A
GLY
189
n
189
GLY
189
A
PHE
190
n
190
PHE
190
A
TRP
191
n
191
TRP
191
A
SER
192
n
192
SER
192
A
PHE
193
n
193
PHE
193
A
ASN
194
n
194
ASN
194
A
VAL
195
n
195
VAL
195
A
ASP
196
n
196
ASP
196
A
SER
197
n
197
SER
197
A
TYR
198
n
198
TYR
198
A
THR
199
n
199
THR
199
A
ALA
200
n
200
ALA
200
A
GLY
201
n
201
GLY
201
A
SER
202
n
202
SER
202
A
GLN
203
n
203
GLN
203
A
SER
204
n
204
SER
204
A
GLY
205
n
205
GLY
205
A
ASP
206
n
206
ASP
206
A
GLY
207
n
207
GLY
207
A
PHE
208
n
208
PHE
208
A
SER
209
n
209
SER
209
A
GLY
210
n
210
GLY
210
A
ILE
211
n
211
ILE
211
A
ALA
212
n
212
ALA
212
A
ASP
213
n
213
ASP
213
A
THR
214
n
214
THR
214
A
GLY
215
n
215
GLY
215
A
THR
216
n
216
THR
216
A
THR
217
n
217
THR
217
A
LEU
218
n
218
LEU
218
A
LEU
219
n
219
LEU
219
A
LEU
220
n
220
LEU
220
A
LEU
221
n
221
LEU
221
A
ASP
222
n
222
ASP
222
A
ASP
223
n
223
ASP
223
A
SER
224
n
224
SER
224
A
VAL
225
n
225
VAL
225
A
VAL
226
n
226
VAL
226
A
SER
227
n
227
SER
227
A
GLN
228
n
228
GLN
228
A
TYR
229
n
229
TYR
229
A
TYR
230
n
230
TYR
230
A
SER
231
n
231
SER
231
A
GLN
232
n
232
GLN
232
A
VAL
233
n
233
VAL
233
A
SER
234
n
234
SER
234
A
GLY
235
n
235
GLY
235
A
ALA
236
n
236
ALA
236
A
GLN
237
n
237
GLN
237
A
GLN
238
n
238
GLN
238
A
ASP
239
n
239
ASP
239
A
SER
240
n
240
SER
240
A
ASN
241
n
241
ASN
241
A
ALA
242
n
242
ALA
242
A
GLY
243
n
243
GLY
243
A
GLY
244
n
244
GLY
244
A
TYR
245
n
245
TYR
245
A
VAL
246
n
246
VAL
246
A
PHE
247
n
247
PHE
247
A
ASP
248
n
248
ASP
248
A
CYS
249
n
249
CYS
249
A
SER
250
n
250
SER
250
A
THR
251
n
251
THR
251
A
ASN
252
n
252
ASN
252
A
LEU
253
n
253
LEU
253
A
PRO
254
n
254
PRO
254
A
ASP
255
n
255
ASP
255
A
PHE
256
n
256
PHE
256
A
SER
257
n
257
SER
257
A
VAL
258
n
258
VAL
258
A
SER
259
n
259
SER
259
A
ILE
260
n
260
ILE
260
A
SER
261
n
261
SER
261
A
GLY
262
n
262
GLY
262
A
TYR
263
n
263
TYR
263
A
THR
264
n
264
THR
264
A
ALA
265
n
265
ALA
265
A
THR
266
n
266
THR
266
A
VAL
267
n
267
VAL
267
A
PRO
268
n
268
PRO
268
A
GLY
269
n
269
GLY
269
A
SER
270
n
270
SER
270
A
LEU
271
n
271
LEU
271
A
ILE
272
n
272
ILE
272
A
ASN
273
n
273
ASN
273
A
TYR
274
n
274
TYR
274
A
GLY
275
n
275
GLY
275
A
PRO
276
n
276
PRO
276
A
SER
277
n
277
SER
277
A
GLY
278
n
278
GLY
278
A
ASP
279
n
279
ASP
279
A
GLY
280
n
280
GLY
280
A
SER
281
n
281
SER
281
A
THR
282
n
282
THR
282
A
CYS
283
n
283
CYS
283
A
LEU
284
n
284
LEU
284
A
GLY
285
n
285
GLY
285
A
GLY
286
n
286
GLY
286
A
ILE
287
n
287
ILE
287
A
GLN
288
n
288
GLN
288
A
SER
289
n
289
SER
289
A
ASN
290
n
290
ASN
290
A
SER
291
n
291
SER
291
A
GLY
292
n
292
GLY
292
A
ILE
293
n
293
ILE
293
A
GLY
294
n
294
GLY
294
A
PHE
295
n
295
PHE
295
A
SER
296
n
296
SER
296
A
ILE
297
n
297
ILE
297
A
PHE
298
n
298
PHE
298
A
GLY
299
n
299
GLY
299
A
ASP
300
n
300
ASP
300
A
ILE
301
n
301
ILE
301
A
PHE
302
n
302
PHE
302
A
LEU
303
n
303
LEU
303
A
LYS
304
n
304
LYS
304
A
SER
305
n
305
SER
305
A
GLN
306
n
306
GLN
306
A
TYR
307
n
307
TYR
307
A
VAL
308
n
308
VAL
308
A
VAL
309
n
309
VAL
309
A
PHE
310
n
310
PHE
310
A
ASP
311
n
311
ASP
311
A
SER
312
n
312
SER
312
A
ASP
313
n
313
ASP
313
A
GLY
314
n
314
GLY
314
A
PRO
315
n
315
PRO
315
A
GLN
316
n
316
GLN
316
A
LEU
317
n
317
LEU
317
A
GLY
318
n
318
GLY
318
A
PHE
319
n
319
PHE
319
A
ALA
320
n
320
ALA
320
A
PRO
321
n
321
PRO
321
A
GLN
322
n
322
GLN
322
A
ALA
323
n
323
ALA
323
A
0.1361
0.1429
0.1363
0.1431
0.1748
0.1821
4274
4614
11.3
11.3
37815
author_defined_assembly
1
monomeric
A
SER
3
GLYCOSYLATION SITE
A
SER
3
SER
A
THR
7
GLYCOSYLATION SITE
A
THR
7
THR
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
TRP
40
A
O
TRP
40
A
N
LEU
121
A
N
LEU
121
A
O
LEU
122
A
O
LEU
122
A
N
ASN
31
A
N
ASN
31
A
O
THR
26
A
O
THR
26
A
N
ILE
23
A
N
ILE
23
A
O
ILE
18
A
O
ILE
18
A
N
THR
9
A
N
THR
9
A
O
GLY
4
A
O
GLY
4
A
N
PHE
167
A
N
PHE
167
A
O
VAL
164
A
O
VAL
164
A
N
ALA
156
A
N
ALA
156
A
O
PHE
153
A
O
PHE
153
A
N
PHE
310
A
N
PHE
310
A
O
TYR
307
A
O
TYR
307
A
N
ALA
320
A
N
ALA
320
A
O
LEU
317
A
O
LEU
317
A
N
THR
182
A
N
THR
182
A
O
TRP
71
A
O
TRP
71
A
N
GLY
83
A
N
GLY
83
A
O
SER
82
A
O
SER
82
A
N
GLN
107
A
N
GLN
107
A
O
VAL
90
A
O
VAL
90
A
N
ALA
97
A
N
ALA
97
A
O
PHE
193
A
O
PHE
193
A
N
GLY
210
A
N
GLY
210
A
O
ILE
211
A
O
ILE
211
A
N
SER
296
A
N
SER
296
A
O
GLN
203
A
O
GLN
203
A
N
ALA
200
A
N
ALA
200
A
O
SER
197
A
O
SER
197
A
N
SER
259
A
N
SER
259
A
O
PHE
256
A
O
PHE
256
A
N
VAL
267
A
N
VAL
267
A
O
LEU
219
A
O
LEU
219
A
N
GLN
288
A
N
GLN
288
A
O
GLN
237
A
O
GLN
237
A
N
VAL
246
A
N
VAL
246
A
O
TYR
274
A
O
TYR
274
A
N
LEU
284
A
N
LEU
284
1
A
HOH
605
K
HOH
1
A
HOH
718
K
HOH
1
A
HOH
792
K
HOH
1
A
C4
MAN
332
WRONG HAND
1
-13.95
1.60
122.70
108.75
A
A
A
O
C
N
THR
THR
GLU
44
44
45
Y
1
17.29
2.50
121.70
138.99
A
A
A
C
N
CA
THR
GLU
GLU
44
45
45
Y
1
5.13
0.60
121.00
126.13
A
A
A
CB
CG
CD2
TYR
TYR
TYR
198
198
198
N
1
-3.79
0.60
121.00
117.21
A
A
A
CB
CG
CD1
TYR
TYR
TYR
198
198
198
N
1
6.12
0.90
118.30
124.42
A
A
A
CB
CG
OD1
ASP
ASP
ASP
313
313
313
B
B
B
N
1
A
ASN
13
59.11
17.36
1
A
SER
281
-119.58
56.13
0.1821
0.1429
0.1431
1.41
10.00
11619
4614
40991
10360
11.3
81.3
RANDOM
1
FREE R
0.0
OTHER
1PPL
ENGH AND HUBER
MOEWS & KRETSINGER
10
2279.3
2861.7
1.41
10.00
405
2868
97
0
2366
0.010
0.029
0.000
0.029
0.059
0.064
0.031
0.000
0.049
0.000
1.44
8
1BXQ
45997
0.074
1
56.035
2.33
94.8
0.0938
1.45
1.49
13.26
1
1.31
66.3
data scaling
X-GEN
data reduction
X-GEN
refinement
SHELXL-97
ACID PROTEINASE (PENICILLOPEPSIN) COMPLEX WITH PHOSPHONATE INHIBITOR.
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
4
N
N
5
N
N
6
N
N
6
N
N
6
N
N
7
N
N
A
ALA
12
A
ALA
12
HELX_P
A
ASP
14
A
ASP
14
5
1
3
A
ALA
48
A
ALA
48
HELX_P
A
GLN
51
A
GLN
51
1
2
4
A
PRO
59
A
PRO
59
HELX_P
A
THR
62
A
THR
62
1
3
4
A
ALA
110
A
ALA
110
HELX_P
A
GLN
113
A
GLN
113
1
4
4
A
SER
127
A
SER
127
HELX_P
A
ILE
129
A
ILE
129
5
5
3
A
PHE
140
A
PHE
140
HELX_P
A
SER
147
A
SER
147
1
6
8
A
SER
172
A
SER
172
HELX_P
A
LYS
174
A
LYS
174
5
7
3
A
ASP
223
A
ASP
223
HELX_P
A
GLN
232
A
GLN
232
1
8
10
A
GLY
269
A
GLY
269
HELX_P
A
ILE
272
A
ILE
272
1
9
4
A
ASP
300
A
ASP
300
HELX_P
A
SER
305
A
SER
305
1
10
6
disulf
2.040
A
CYS
249
A
SG
CYS
249
1_555
A
CYS
283
A
SG
CYS
283
1_555
covale
1.425
one
O-Glycosylation
A
SER
3
A
OG
SER
3
1_555
A
MAN
331
B
C1
MAN
1_555
covale
1.413
one
O-Glycosylation
A
THR
7
A
OG1
THR
7
1_555
A
MAN
332
C
C1
MAN
1_555
HYDROLASE
HYDROLASE, PHOSPHONATE INHIBITORS
A
GLN
133
A
GLN
133
1
A
PRO
134
A
PRO
134
-1.09
A
GLY
314
A
GLY
314
1
A
PRO
315
A
PRO
315
-4.25
PENP_PENJA
UNP
1
P00798
1
323
1BXQ
1
323
P00798
A
1
1
323
10
3
2
3
4
2
2
2
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
LEU
39
A
LEU
39
A
VAL
41
A
VAL
41
A
GLY
120
A
GLY
120
A
GLY
123
A
GLY
123
A
THR
26
A
THR
26
A
ASP
33
A
ASP
33
A
TYR
17
A
TYR
17
A
ILE
23
A
ILE
23
A
GLY
4
A
GLY
4
A
PRO
10
A
PRO
10
A
GLY
163
A
GLY
163
A
PHE
167
A
PHE
167
A
LEU
152
A
LEU
152
A
ALA
156
A
ALA
156
A
GLN
306
A
GLN
306
A
ASP
311
A
ASP
311
A
GLN
316
A
GLN
316
A
PRO
321
A
PRO
321
A
THR
180
A
THR
180
A
GLY
183
A
GLY
183
A
THR
70
A
THR
70
A
SER
74
A
SER
74
A
SER
80
A
SER
80
A
ASP
88
A
ASP
88
A
GLN
100
A
GLN
100
A
ILE
108
A
ILE
108
A
VAL
90
A
VAL
90
A
VAL
92
A
VAL
92
A
VAL
95
A
VAL
95
A
ALA
97
A
ALA
97
A
SER
192
A
SER
192
A
VAL
195
A
VAL
195
A
PHE
208
A
PHE
208
A
ALA
212
A
ALA
212
A
SER
296
A
SER
296
A
PHE
298
A
PHE
298
A
GLN
203
A
GLN
203
A
ASP
206
A
ASP
206
A
SER
197
A
SER
197
A
ALA
200
A
ALA
200
A
PHE
256
A
PHE
256
A
ILE
260
A
ILE
260
A
TYR
263
A
TYR
263
A
VAL
267
A
VAL
267
A
LEU
219
A
LEU
219
A
LEU
221
A
LEU
221
A
ILE
287
A
ILE
287
A
SER
289
A
SER
289
A
GLN
237
A
GLN
237
A
ASP
239
A
ASP
239
A
GLY
244
A
GLY
244
A
VAL
246
A
VAL
246
A
ASN
273
A
ASN
273
A
PRO
276
A
PRO
276
A
CYS
283
A
CYS
283
A
GLY
285
A
GLY
285
CATALYTIC RESIDUES
Author
2
A
ASP
33
A
ASP
33
2
1_555
A
ASP
213
A
ASP
213
2
1_555
5
C 1 2 1