0.009982 0.000000 0.003950 0.000000 0.018515 0.000000 0.000000 0.000000 0.009913 0.00000 0.00000 0.00000 Zhang, H.-l. Zhang, Y.-q. Song, S.-y. Zhou, Y. Lin, Z.-j. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 16 90.00 111.59 90.00 100.180 54.010 108.490 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C14 H28 O6 292.369 n octyl beta-D-glucopyranoside D-saccharide Cd 2 112.411 CADMIUM ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking NE Protein Pept.Lett. PPELEN 2077 0929-8665 6 185 193 -1 Structure of Cadmium-substituted Phospholipase A2 from Agkistrodon halys Pallas at 2.8 Angstroms Resolution 1999 DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 54 510 521 10.1107/S0907444997013644 Structure of a Basic Phospholipase A2 from Agkistrodon halys Pallas at 2.13 Angstroms Resolution 1998 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 280 1 AREA DETECTOR 1998-03-17 XENTRONICS SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE SIEMENS 13922.184 BASIC PHOSPHOLIPASE A2 3.1.1.4 4 nat polymer 292.369 octyl beta-D-glucopyranoside 2 syn non-polymer 112.411 CADMIUM ION 6 syn non-polymer 18.015 water 47 nat water PA2-I, PHOSPHATIDYLCHOLINE 2-ACYLHYDROLASE E.C.3.1.1.4 no no HLLQFRKMIKKMTGKEPVVSYAFYGCYCGSGGRGKPKNATDRCCFVHDCCYEKVTGCDPKWDDYTYSWKNGTIVCGGDDP CKKEVCECDKAAAICFRDNLKTYKKRYMAYPDILCSSKSEKC HLLQFRKMIKKMTGKEPVVSYAFYGCYCGSGGRGKPKNATDRCCFVHDCCYEKVTGCDPKWDDYTYSWKNGTIVCGGDDP CKKEVCECDKAAAICFRDNLKTYKKRYMAYPDILCSSKSEKC A,B,C,D polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n halys viper Gloydius sample 8714 Gloydius halys 1 2.45 49.78 VAPOR DIFFUSION, HANGING DROP 8.5 PEG 4000, n-octyl beta-D-glycopyranoside, CaCl2, pH 8.5, VAPOR DIFFUSION, HANGING DROP at 291K 291 chem_comp entity pdbx_chem_comp_identifier pdbx_entity_nonpoly pdbx_struct_conn_angle struct_conn struct_site struct_site_gen repository Initial release Carbohydrate remediation repository Remediation Version format compliance Version format compliance Data collection Derived calculations Structure summary 1 0 2002-07-05 1 1 2008-04-27 1 2 2011-07-13 1 3 2020-07-29 _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.type _entity.pdbx_description _pdbx_entity_nonpoly.name _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id b-octylglucoside 1JIA contains the 2.13 Angstroms structure of the same protein in space group P212121. RCSB Y RCSB 1999-07-22 REL REL BOG octyl beta-D-glucopyranoside CD CADMIUM ION HOH water BOG 600 2 BOG BOG 600 A ICD 100 3 CD CD 601 A ICD 104 3 CD CD 602 A BOG 601 2 BOG BOG 601 B ICD 101 3 CD CD 602 B ICD 102 3 CD CD 134 C ICD 103 3 CD CD 134 D ICD 105 3 CD CD 135 D TIP 4 4 HOH HOH 603 A TIP 5 4 HOH HOH 604 A TIP 8 4 HOH HOH 605 A TIP 9 4 HOH HOH 606 A TIP 10 4 HOH HOH 607 A TIP 11 4 HOH HOH 608 A TIP 13 4 HOH HOH 609 A TIP 25 4 HOH HOH 610 A TIP 26 4 HOH HOH 611 A TIP 27 4 HOH HOH 612 A TIP 32 4 HOH HOH 613 A TIP 35 4 HOH HOH 614 A TIP 39 4 HOH HOH 615 A TIP 41 4 HOH HOH 616 A TIP 42 4 HOH HOH 617 A TIP 1 4 HOH HOH 603 B TIP 2 4 HOH HOH 604 B TIP 12 4 HOH HOH 605 B TIP 14 4 HOH HOH 606 B TIP 23 4 HOH HOH 607 B TIP 24 4 HOH HOH 608 B TIP 40 4 HOH HOH 609 B TIP 47 4 HOH HOH 610 B TIP 3 4 HOH HOH 135 C TIP 7 4 HOH HOH 136 C TIP 15 4 HOH HOH 137 C TIP 16 4 HOH HOH 138 C TIP 30 4 HOH HOH 139 C TIP 33 4 HOH HOH 140 C TIP 36 4 HOH HOH 141 C TIP 38 4 HOH HOH 142 C TIP 43 4 HOH HOH 143 C TIP 44 4 HOH HOH 144 C TIP 45 4 HOH HOH 145 C TIP 46 4 HOH HOH 146 C TIP 6 4 HOH HOH 136 D TIP 17 4 HOH HOH 137 D TIP 18 4 HOH HOH 138 D TIP 19 4 HOH HOH 139 D TIP 20 4 HOH HOH 140 D TIP 21 4 HOH HOH 141 D TIP 22 4 HOH HOH 142 D TIP 28 4 HOH HOH 143 D TIP 29 4 HOH HOH 144 D TIP 31 4 HOH HOH 145 D TIP 34 4 HOH HOH 146 D TIP 37 4 HOH HOH 147 D HIS 1 n 1 HIS 1 A LEU 2 n 2 LEU 2 A LEU 3 n 3 LEU 3 A GLN 4 n 4 GLN 4 A PHE 5 n 5 PHE 5 A ARG 6 n 6 ARG 6 A LYS 7 n 7 LYS 7 A MET 8 n 8 MET 8 A ILE 9 n 9 ILE 9 A LYS 10 n 10 LYS 10 A LYS 11 n 11 LYS 11 A MET 12 n 12 MET 12 A THR 13 n 13 THR 13 A GLY 14 n 14 GLY 14 A LYS 16 n 15 LYS 16 A GLU 17 n 16 GLU 17 A PRO 18 n 17 PRO 18 A VAL 19 n 18 VAL 19 A VAL 20 n 19 VAL 20 A SER 21 n 20 SER 21 A TYR 22 n 21 TYR 22 A ALA 23 n 22 ALA 23 A PHE 24 n 23 PHE 24 A TYR 25 n 24 TYR 25 A GLY 26 n 25 GLY 26 A CYS 27 n 26 CYS 27 A TYR 28 n 27 TYR 28 A CYS 29 n 28 CYS 29 A GLY 30 n 29 GLY 30 A SER 31 n 30 SER 31 A GLY 32 n 31 GLY 32 A GLY 33 n 32 GLY 33 A ARG 34 n 33 ARG 34 A GLY 35 n 34 GLY 35 A LYS 36 n 35 LYS 36 A PRO 37 n 36 PRO 37 A LYS 38 n 37 LYS 38 A ASN 39 n 38 ASN 39 A ALA 40 n 39 ALA 40 A THR 41 n 40 THR 41 A ASP 42 n 41 ASP 42 A ARG 43 n 42 ARG 43 A CYS 44 n 43 CYS 44 A CYS 45 n 44 CYS 45 A PHE 46 n 45 PHE 46 A VAL 47 n 46 VAL 47 A HIS 48 n 47 HIS 48 A ASP 49 n 48 ASP 49 A CYS 50 n 49 CYS 50 A CYS 51 n 50 CYS 51 A TYR 52 n 51 TYR 52 A GLU 53 n 52 GLU 53 A LYS 54 n 53 LYS 54 A VAL 55 n 54 VAL 55 A THR 56 n 55 THR 56 A GLY 59 n 56 GLY 59 A CYS 61 n 57 CYS 61 A ASP 67 n 58 ASP 67 A PRO 68 n 59 PRO 68 A LYS 69 n 60 LYS 69 A TRP 70 n 61 TRP 70 A ASP 71 n 62 ASP 71 A ASP 72 n 63 ASP 72 A TYR 73 n 64 TYR 73 A THR 74 n 65 THR 74 A TYR 75 n 66 TYR 75 A SER 76 n 67 SER 76 A TRP 77 n 68 TRP 77 A LYS 78 n 69 LYS 78 A ASN 79 n 70 ASN 79 A GLY 80 n 71 GLY 80 A THR 81 n 72 THR 81 A ILE 82 n 73 ILE 82 A VAL 83 n 74 VAL 83 A CYS 84 n 75 CYS 84 A GLY 85 n 76 GLY 85 A GLY 86 n 77 GLY 86 A ASP 88 n 78 ASP 88 A ASP 89 n 79 ASP 89 A PRO 90 n 80 PRO 90 A CYS 91 n 81 CYS 91 A LYS 92 n 82 LYS 92 A LYS 93 n 83 LYS 93 A GLU 94 n 84 GLU 94 A VAL 95 n 85 VAL 95 A CYS 96 n 86 CYS 96 A GLU 97 n 87 GLU 97 A CYS 98 n 88 CYS 98 A ASP 99 n 89 ASP 99 A LYS 100 n 90 LYS 100 A ALA 101 n 91 ALA 101 A ALA 102 n 92 ALA 102 A ALA 103 n 93 ALA 103 A ILE 104 n 94 ILE 104 A CYS 105 n 95 CYS 105 A PHE 106 n 96 PHE 106 A ARG 107 n 97 ARG 107 A ASP 108 n 98 ASP 108 A ASN 109 n 99 ASN 109 A LEU 110 n 100 LEU 110 A LYS 111 n 101 LYS 111 A THR 112 n 102 THR 112 A TYR 113 n 103 TYR 113 A LYS 114 n 104 LYS 114 A LYS 115 n 105 LYS 115 A ARG 116 n 106 ARG 116 A TYR 117 n 107 TYR 117 A MET 118 n 108 MET 118 A ALA 119 n 109 ALA 119 A TYR 120 n 110 TYR 120 A PRO 121 n 111 PRO 121 A ASP 122 n 112 ASP 122 A ILE 124 n 113 ILE 124 A LEU 125 n 114 LEU 125 A CYS 126 n 115 CYS 126 A SER 127 n 116 SER 127 A SER 128 n 117 SER 128 A LYS 129 n 118 LYS 129 A SER 130 n 119 SER 130 A GLU 131 n 120 GLU 131 A LYS 132 n 121 LYS 132 A CYS 133 n 122 CYS 133 A HIS 1 n 1 HIS 1 B LEU 2 n 2 LEU 2 B LEU 3 n 3 LEU 3 B GLN 4 n 4 GLN 4 B PHE 5 n 5 PHE 5 B ARG 6 n 6 ARG 6 B LYS 7 n 7 LYS 7 B MET 8 n 8 MET 8 B ILE 9 n 9 ILE 9 B LYS 10 n 10 LYS 10 B LYS 11 n 11 LYS 11 B MET 12 n 12 MET 12 B THR 13 n 13 THR 13 B GLY 14 n 14 GLY 14 B LYS 16 n 15 LYS 16 B GLU 17 n 16 GLU 17 B PRO 18 n 17 PRO 18 B VAL 19 n 18 VAL 19 B VAL 20 n 19 VAL 20 B SER 21 n 20 SER 21 B TYR 22 n 21 TYR 22 B ALA 23 n 22 ALA 23 B PHE 24 n 23 PHE 24 B TYR 25 n 24 TYR 25 B GLY 26 n 25 GLY 26 B CYS 27 n 26 CYS 27 B TYR 28 n 27 TYR 28 B CYS 29 n 28 CYS 29 B GLY 30 n 29 GLY 30 B SER 31 n 30 SER 31 B GLY 32 n 31 GLY 32 B GLY 33 n 32 GLY 33 B ARG 34 n 33 ARG 34 B GLY 35 n 34 GLY 35 B LYS 36 n 35 LYS 36 B PRO 37 n 36 PRO 37 B LYS 38 n 37 LYS 38 B ASN 39 n 38 ASN 39 B ALA 40 n 39 ALA 40 B THR 41 n 40 THR 41 B ASP 42 n 41 ASP 42 B ARG 43 n 42 ARG 43 B CYS 44 n 43 CYS 44 B CYS 45 n 44 CYS 45 B PHE 46 n 45 PHE 46 B VAL 47 n 46 VAL 47 B HIS 48 n 47 HIS 48 B ASP 49 n 48 ASP 49 B CYS 50 n 49 CYS 50 B CYS 51 n 50 CYS 51 B TYR 52 n 51 TYR 52 B GLU 53 n 52 GLU 53 B LYS 54 n 53 LYS 54 B VAL 55 n 54 VAL 55 B THR 56 n 55 THR 56 B GLY 59 n 56 GLY 59 B CYS 61 n 57 CYS 61 B ASP 67 n 58 ASP 67 B PRO 68 n 59 PRO 68 B LYS 69 n 60 LYS 69 B TRP 70 n 61 TRP 70 B ASP 71 n 62 ASP 71 B ASP 72 n 63 ASP 72 B TYR 73 n 64 TYR 73 B THR 74 n 65 THR 74 B TYR 75 n 66 TYR 75 B SER 76 n 67 SER 76 B TRP 77 n 68 TRP 77 B LYS 78 n 69 LYS 78 B ASN 79 n 70 ASN 79 B GLY 80 n 71 GLY 80 B THR 81 n 72 THR 81 B ILE 82 n 73 ILE 82 B VAL 83 n 74 VAL 83 B CYS 84 n 75 CYS 84 B GLY 85 n 76 GLY 85 B GLY 86 n 77 GLY 86 B ASP 88 n 78 ASP 88 B ASP 89 n 79 ASP 89 B PRO 90 n 80 PRO 90 B CYS 91 n 81 CYS 91 B LYS 92 n 82 LYS 92 B LYS 93 n 83 LYS 93 B GLU 94 n 84 GLU 94 B VAL 95 n 85 VAL 95 B CYS 96 n 86 CYS 96 B GLU 97 n 87 GLU 97 B CYS 98 n 88 CYS 98 B ASP 99 n 89 ASP 99 B LYS 100 n 90 LYS 100 B ALA 101 n 91 ALA 101 B ALA 102 n 92 ALA 102 B ALA 103 n 93 ALA 103 B ILE 104 n 94 ILE 104 B CYS 105 n 95 CYS 105 B PHE 106 n 96 PHE 106 B ARG 107 n 97 ARG 107 B ASP 108 n 98 ASP 108 B ASN 109 n 99 ASN 109 B LEU 110 n 100 LEU 110 B LYS 111 n 101 LYS 111 B THR 112 n 102 THR 112 B TYR 113 n 103 TYR 113 B LYS 114 n 104 LYS 114 B LYS 115 n 105 LYS 115 B ARG 116 n 106 ARG 116 B TYR 117 n 107 TYR 117 B MET 118 n 108 MET 118 B ALA 119 n 109 ALA 119 B TYR 120 n 110 TYR 120 B PRO 121 n 111 PRO 121 B ASP 122 n 112 ASP 122 B ILE 124 n 113 ILE 124 B LEU 125 n 114 LEU 125 B CYS 126 n 115 CYS 126 B SER 127 n 116 SER 127 B SER 128 n 117 SER 128 B LYS 129 n 118 LYS 129 B SER 130 n 119 SER 130 B GLU 131 n 120 GLU 131 B LYS 132 n 121 LYS 132 B CYS 133 n 122 CYS 133 B HIS 1 n 1 HIS 1 C LEU 2 n 2 LEU 2 C LEU 3 n 3 LEU 3 C GLN 4 n 4 GLN 4 C PHE 5 n 5 PHE 5 C ARG 6 n 6 ARG 6 C LYS 7 n 7 LYS 7 C MET 8 n 8 MET 8 C ILE 9 n 9 ILE 9 C LYS 10 n 10 LYS 10 C LYS 11 n 11 LYS 11 C MET 12 n 12 MET 12 C THR 13 n 13 THR 13 C GLY 14 n 14 GLY 14 C LYS 16 n 15 LYS 16 C GLU 17 n 16 GLU 17 C PRO 18 n 17 PRO 18 C VAL 19 n 18 VAL 19 C VAL 20 n 19 VAL 20 C SER 21 n 20 SER 21 C TYR 22 n 21 TYR 22 C ALA 23 n 22 ALA 23 C PHE 24 n 23 PHE 24 C TYR 25 n 24 TYR 25 C GLY 26 n 25 GLY 26 C CYS 27 n 26 CYS 27 C TYR 28 n 27 TYR 28 C CYS 29 n 28 CYS 29 C GLY 30 n 29 GLY 30 C SER 31 n 30 SER 31 C GLY 32 n 31 GLY 32 C GLY 33 n 32 GLY 33 C ARG 34 n 33 ARG 34 C GLY 35 n 34 GLY 35 C LYS 36 n 35 LYS 36 C PRO 37 n 36 PRO 37 C LYS 38 n 37 LYS 38 C ASN 39 n 38 ASN 39 C ALA 40 n 39 ALA 40 C THR 41 n 40 THR 41 C ASP 42 n 41 ASP 42 C ARG 43 n 42 ARG 43 C CYS 44 n 43 CYS 44 C CYS 45 n 44 CYS 45 C PHE 46 n 45 PHE 46 C VAL 47 n 46 VAL 47 C HIS 48 n 47 HIS 48 C ASP 49 n 48 ASP 49 C CYS 50 n 49 CYS 50 C CYS 51 n 50 CYS 51 C TYR 52 n 51 TYR 52 C GLU 53 n 52 GLU 53 C LYS 54 n 53 LYS 54 C VAL 55 n 54 VAL 55 C THR 56 n 55 THR 56 C GLY 59 n 56 GLY 59 C CYS 61 n 57 CYS 61 C ASP 67 n 58 ASP 67 C PRO 68 n 59 PRO 68 C LYS 69 n 60 LYS 69 C TRP 70 n 61 TRP 70 C ASP 71 n 62 ASP 71 C ASP 72 n 63 ASP 72 C TYR 73 n 64 TYR 73 C THR 74 n 65 THR 74 C TYR 75 n 66 TYR 75 C SER 76 n 67 SER 76 C TRP 77 n 68 TRP 77 C LYS 78 n 69 LYS 78 C ASN 79 n 70 ASN 79 C GLY 80 n 71 GLY 80 C THR 81 n 72 THR 81 C ILE 82 n 73 ILE 82 C VAL 83 n 74 VAL 83 C CYS 84 n 75 CYS 84 C GLY 85 n 76 GLY 85 C GLY 86 n 77 GLY 86 C ASP 88 n 78 ASP 88 C ASP 89 n 79 ASP 89 C PRO 90 n 80 PRO 90 C CYS 91 n 81 CYS 91 C LYS 92 n 82 LYS 92 C LYS 93 n 83 LYS 93 C GLU 94 n 84 GLU 94 C VAL 95 n 85 VAL 95 C CYS 96 n 86 CYS 96 C GLU 97 n 87 GLU 97 C CYS 98 n 88 CYS 98 C ASP 99 n 89 ASP 99 C LYS 100 n 90 LYS 100 C ALA 101 n 91 ALA 101 C ALA 102 n 92 ALA 102 C ALA 103 n 93 ALA 103 C ILE 104 n 94 ILE 104 C CYS 105 n 95 CYS 105 C PHE 106 n 96 PHE 106 C ARG 107 n 97 ARG 107 C ASP 108 n 98 ASP 108 C ASN 109 n 99 ASN 109 C LEU 110 n 100 LEU 110 C LYS 111 n 101 LYS 111 C THR 112 n 102 THR 112 C TYR 113 n 103 TYR 113 C LYS 114 n 104 LYS 114 C LYS 115 n 105 LYS 115 C ARG 116 n 106 ARG 116 C TYR 117 n 107 TYR 117 C MET 118 n 108 MET 118 C ALA 119 n 109 ALA 119 C TYR 120 n 110 TYR 120 C PRO 121 n 111 PRO 121 C ASP 122 n 112 ASP 122 C ILE 124 n 113 ILE 124 C LEU 125 n 114 LEU 125 C CYS 126 n 115 CYS 126 C SER 127 n 116 SER 127 C SER 128 n 117 SER 128 C LYS 129 n 118 LYS 129 C SER 130 n 119 SER 130 C GLU 131 n 120 GLU 131 C LYS 132 n 121 LYS 132 C CYS 133 n 122 CYS 133 C HIS 1 n 1 HIS 1 D LEU 2 n 2 LEU 2 D LEU 3 n 3 LEU 3 D GLN 4 n 4 GLN 4 D PHE 5 n 5 PHE 5 D ARG 6 n 6 ARG 6 D LYS 7 n 7 LYS 7 D MET 8 n 8 MET 8 D ILE 9 n 9 ILE 9 D LYS 10 n 10 LYS 10 D LYS 11 n 11 LYS 11 D MET 12 n 12 MET 12 D THR 13 n 13 THR 13 D GLY 14 n 14 GLY 14 D LYS 16 n 15 LYS 16 D GLU 17 n 16 GLU 17 D PRO 18 n 17 PRO 18 D VAL 19 n 18 VAL 19 D VAL 20 n 19 VAL 20 D SER 21 n 20 SER 21 D TYR 22 n 21 TYR 22 D ALA 23 n 22 ALA 23 D PHE 24 n 23 PHE 24 D TYR 25 n 24 TYR 25 D GLY 26 n 25 GLY 26 D CYS 27 n 26 CYS 27 D TYR 28 n 27 TYR 28 D CYS 29 n 28 CYS 29 D GLY 30 n 29 GLY 30 D SER 31 n 30 SER 31 D GLY 32 n 31 GLY 32 D GLY 33 n 32 GLY 33 D ARG 34 n 33 ARG 34 D GLY 35 n 34 GLY 35 D LYS 36 n 35 LYS 36 D PRO 37 n 36 PRO 37 D LYS 38 n 37 LYS 38 D ASN 39 n 38 ASN 39 D ALA 40 n 39 ALA 40 D THR 41 n 40 THR 41 D ASP 42 n 41 ASP 42 D ARG 43 n 42 ARG 43 D CYS 44 n 43 CYS 44 D CYS 45 n 44 CYS 45 D PHE 46 n 45 PHE 46 D VAL 47 n 46 VAL 47 D HIS 48 n 47 HIS 48 D ASP 49 n 48 ASP 49 D CYS 50 n 49 CYS 50 D CYS 51 n 50 CYS 51 D TYR 52 n 51 TYR 52 D GLU 53 n 52 GLU 53 D LYS 54 n 53 LYS 54 D VAL 55 n 54 VAL 55 D THR 56 n 55 THR 56 D GLY 59 n 56 GLY 59 D CYS 61 n 57 CYS 61 D ASP 67 n 58 ASP 67 D PRO 68 n 59 PRO 68 D LYS 69 n 60 LYS 69 D TRP 70 n 61 TRP 70 D ASP 71 n 62 ASP 71 D ASP 72 n 63 ASP 72 D TYR 73 n 64 TYR 73 D THR 74 n 65 THR 74 D TYR 75 n 66 TYR 75 D SER 76 n 67 SER 76 D TRP 77 n 68 TRP 77 D LYS 78 n 69 LYS 78 D ASN 79 n 70 ASN 79 D GLY 80 n 71 GLY 80 D THR 81 n 72 THR 81 D ILE 82 n 73 ILE 82 D VAL 83 n 74 VAL 83 D CYS 84 n 75 CYS 84 D GLY 85 n 76 GLY 85 D GLY 86 n 77 GLY 86 D ASP 88 n 78 ASP 88 D ASP 89 n 79 ASP 89 D PRO 90 n 80 PRO 90 D CYS 91 n 81 CYS 91 D LYS 92 n 82 LYS 92 D LYS 93 n 83 LYS 93 D GLU 94 n 84 GLU 94 D VAL 95 n 85 VAL 95 D CYS 96 n 86 CYS 96 D GLU 97 n 87 GLU 97 D CYS 98 n 88 CYS 98 D ASP 99 n 89 ASP 99 D LYS 100 n 90 LYS 100 D ALA 101 n 91 ALA 101 D ALA 102 n 92 ALA 102 D ALA 103 n 93 ALA 103 D ILE 104 n 94 ILE 104 D CYS 105 n 95 CYS 105 D PHE 106 n 96 PHE 106 D ARG 107 n 97 ARG 107 D ASP 108 n 98 ASP 108 D ASN 109 n 99 ASN 109 D LEU 110 n 100 LEU 110 D LYS 111 n 101 LYS 111 D THR 112 n 102 THR 112 D TYR 113 n 103 TYR 113 D LYS 114 n 104 LYS 114 D LYS 115 n 105 LYS 115 D ARG 116 n 106 ARG 116 D TYR 117 n 107 TYR 117 D MET 118 n 108 MET 118 D ALA 119 n 109 ALA 119 D TYR 120 n 110 TYR 120 D PRO 121 n 111 PRO 121 D ASP 122 n 112 ASP 122 D ILE 124 n 113 ILE 124 D LEU 125 n 114 LEU 125 D CYS 126 n 115 CYS 126 D SER 127 n 116 SER 127 D SER 128 n 117 SER 128 D LYS 129 n 118 LYS 129 D SER 130 n 119 SER 130 D GLU 131 n 120 GLU 131 D LYS 132 n 121 LYS 132 D CYS 133 n 122 CYS 133 D author_defined_assembly 2 dimeric author_defined_assembly 2 dimeric A GLY 26 A O GLY 25 1_555 A CD 602 G CD CD 1_555 A ASP 122 A OD1 ASP 112 1_555 107.2 A HIS 48 A ND1 HIS 47 1_555 A CD 601 F CD CD 1_555 A ASP 49 A OD2 ASP 48 1_555 105.2 A HIS 48 A ND1 HIS 47 1_555 A CD 601 F CD CD 1_555 A HOH 603 M O HOH 1_555 102.7 A ASP 49 A OD2 ASP 48 1_555 A CD 601 F CD CD 1_555 A HOH 603 M O HOH 1_555 118.2 A HIS 48 A ND1 HIS 47 1_555 A CD 601 F CD CD 1_555 A HOH 604 M O HOH 1_555 96.8 A ASP 49 A OD2 ASP 48 1_555 A CD 601 F CD CD 1_555 A HOH 604 M O HOH 1_555 109.8 A HOH 603 M O HOH 1_555 A CD 601 F CD CD 1_555 A HOH 604 M O HOH 1_555 120.1 B HIS 48 B ND1 HIS 47 1_555 B CD 602 I CD CD 1_555 B ASP 49 B OD2 ASP 48 1_555 100.3 B HIS 48 B ND1 HIS 47 1_555 B CD 602 I CD CD 1_555 B HOH 610 N O HOH 1_555 107.2 B ASP 49 B OD2 ASP 48 1_555 B CD 602 I CD CD 1_555 B HOH 610 N O HOH 1_555 89.9 C HIS 48 C ND1 HIS 47 1_555 C CD 134 J CD CD 1_555 C ASP 49 C OD2 ASP 48 1_555 109.0 C HIS 48 C ND1 HIS 47 1_555 C CD 134 J CD CD 1_555 C HOH 144 O O HOH 1_555 102.8 C ASP 49 C OD2 ASP 48 1_555 C CD 134 J CD CD 1_555 C HOH 144 O O HOH 1_555 100.9 D HIS 48 D ND1 HIS 47 1_555 D CD 134 K CD CD 1_555 D ASP 49 D OD2 ASP 48 1_555 103.9 D HIS 48 D ND1 HIS 47 1_555 D CD 134 K CD CD 1_555 D HOH 136 P O HOH 1_555 104.0 D ASP 49 D OD2 ASP 48 1_555 D CD 134 K CD CD 1_555 D HOH 136 P O HOH 1_555 109.6 D HIS 48 D ND1 HIS 47 1_555 D CD 134 K CD CD 1_555 D HOH 147 P O HOH 1_555 107.5 D ASP 49 D OD2 ASP 48 1_555 D CD 134 K CD CD 1_555 D HOH 147 P O HOH 1_555 112.5 D HOH 136 P O HOH 1_555 D CD 134 K CD CD 1_555 D HOH 147 P O HOH 1_555 118.0 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O SER 76 A O SER 67 A N VAL 83 A N VAL 74 B O SER 76 B O SER 67 B N VAL 83 B N VAL 74 C O SER 76 C O SER 67 C N VAL 83 C N VAL 74 D O SER 76 D O SER 67 D N VAL 83 D N VAL 74 1 -3.02 0.50 120.30 117.28 A A A NE CZ NH1 ARG ARG ARG 107 107 107 N 1 3.15 0.50 120.30 123.45 A A A NE CZ NH2 ARG ARG ARG 107 107 107 N 1 -4.62 0.50 120.30 115.68 B B B NE CZ NH1 ARG ARG ARG 6 6 6 N 1 5.11 0.50 120.30 125.41 B B B NE CZ NH2 ARG ARG ARG 6 6 6 N 1 -3.08 0.50 120.30 117.22 B B B NE CZ NH1 ARG ARG ARG 107 107 107 N 1 3.09 0.50 120.30 123.39 D D D NE CZ NH1 ARG ARG ARG 107 107 107 N 1 -3.07 0.50 120.30 117.23 D D D NE CZ NH2 ARG ARG ARG 107 107 107 N 1 A TRP 77 -85.40 31.49 1 A LYS 78 -57.25 108.93 1 A ASN 79 75.90 47.46 1 A SER 127 -47.69 152.96 1 B SER 31 24.89 109.13 1 B TRP 77 -85.86 31.89 1 B ASN 79 74.27 47.11 1 B SER 127 -48.02 152.16 1 C SER 31 -19.56 115.96 1 C TRP 77 -85.01 32.43 1 C ASN 79 74.92 47.26 1 C SER 127 -48.97 151.55 1 D SER 31 7.30 -114.08 1 D TRP 77 -85.67 31.55 1 D ASN 79 74.68 45.67 1 D SER 127 -47.95 150.95 Used 2-fold noncrystallographic symmetry (NCS) restraints 0.282 0.201 2.80 8.0 1102 11762 11066 10 95.3 RANDOM 1 THROUGHOUT 2.0 2.80 8.0 47 3949 46 0 3856 0.008 1.230 26.450 0.550 24.1 2.8 20.0 1C1J 13527 13017 0.0 0.0 0.108 1 11.6 3.3 96.2 0.37 2.80 2.90 1247 3.2 95.0 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement X-PLOR 3.851 BASIC PHOSPHOLIPASE A2 (E.C.3.1.1.4) STRUCTURE OF CADMIUM-SUBSTITUTED PHOSPHOLIPASE A2 FROM AGKISTRONDON HALYS PALLAS AT 2.8 ANGSTROMS RESOLUTION 1 N N 1 N N 1 N N 1 N N 2 N N 3 N N 3 N N 2 N N 3 N N 3 N N 3 N N 3 N N 4 N N 4 N N 4 N N 4 N N A HIS 1 A HIS 1 HELX_P A GLY 14 A GLY 14 1 1 14 A GLU 17 A GLU 16 HELX_P A TYR 22 A TYR 21 1 2 6 A ASN 39 A ASN 38 HELX_P A VAL 55 A VAL 54 1 3 17 A ASP 89 A ASP 79 HELX_P A ASN 109 A ASN 99 1 4 21 A LEU 110 A LEU 100 HELX_P A TYR 113 A TYR 103 5 5 4 A PRO 121 A PRO 111 HELX_P A CYS 126 A CYS 115 5 6 5 B HIS 1 B HIS 1 HELX_P B GLY 14 B GLY 14 1 7 14 B GLU 17 B GLU 16 HELX_P B TYR 22 B TYR 21 1 8 6 B ASN 39 B ASN 38 HELX_P B VAL 55 B VAL 54 1 9 17 B ASP 89 B ASP 79 HELX_P B LEU 110 B LEU 100 1 10 22 B LYS 111 B LYS 101 HELX_P B TYR 113 B TYR 103 5 11 3 B PRO 121 B PRO 111 HELX_P B CYS 126 B CYS 115 5 12 5 C HIS 1 C HIS 1 HELX_P C GLY 14 C GLY 14 1 13 14 C GLU 17 C GLU 16 HELX_P C TYR 22 C TYR 21 1 14 6 C ASN 39 C ASN 38 HELX_P C VAL 55 C VAL 54 1 15 17 C ASP 89 C ASP 79 HELX_P C ASN 109 C ASN 99 1 16 21 C LEU 110 C LEU 100 HELX_P C TYR 113 C TYR 103 5 17 4 C PRO 121 C PRO 111 HELX_P C CYS 126 C CYS 115 5 18 5 D HIS 1 D HIS 1 HELX_P D GLY 14 D GLY 14 1 19 14 D GLU 17 D GLU 16 HELX_P D TYR 22 D TYR 21 1 20 6 D ASN 39 D ASN 38 HELX_P D VAL 55 D VAL 54 1 21 17 D ASP 89 D ASP 79 HELX_P D LEU 110 D LEU 100 1 22 22 D LYS 111 D LYS 101 HELX_P D TYR 113 D TYR 103 5 23 3 D PRO 121 D PRO 111 HELX_P D CYS 126 D CYS 115 5 24 5 disulf 2.028 A CYS 27 A SG CYS 26 1_555 A CYS 126 A SG CYS 115 1_555 disulf 2.017 A CYS 29 A SG CYS 28 1_555 A CYS 45 A SG CYS 44 1_555 disulf 2.019 A CYS 44 A SG CYS 43 1_555 A CYS 105 A SG CYS 95 1_555 disulf 2.030 A CYS 50 A SG CYS 49 1_555 A CYS 133 A SG CYS 122 1_555 disulf 2.019 A CYS 51 A SG CYS 50 1_555 A CYS 98 A SG CYS 88 1_555 disulf 2.028 A CYS 61 A SG CYS 57 1_555 A CYS 91 A SG CYS 81 1_555 disulf 2.027 A CYS 84 A SG CYS 75 1_555 A CYS 96 A SG CYS 86 1_555 disulf 2.035 B CYS 27 B SG CYS 26 1_555 B CYS 126 B SG CYS 115 1_555 disulf 2.033 B CYS 29 B SG CYS 28 1_555 B CYS 45 B SG CYS 44 1_555 disulf 2.030 B CYS 44 B SG CYS 43 1_555 B CYS 105 B SG CYS 95 1_555 disulf 2.038 B CYS 50 B SG CYS 49 1_555 B CYS 133 B SG CYS 122 1_555 disulf 2.031 B CYS 51 B SG CYS 50 1_555 B CYS 98 B SG CYS 88 1_555 disulf 2.027 B CYS 61 B SG CYS 57 1_555 B CYS 91 B SG CYS 81 1_555 disulf 2.025 B CYS 84 B SG CYS 75 1_555 B CYS 96 B SG CYS 86 1_555 disulf 2.021 C CYS 27 C SG CYS 26 1_555 C CYS 126 C SG CYS 115 1_555 disulf 2.031 C CYS 29 C SG CYS 28 1_555 C CYS 45 C SG CYS 44 1_555 disulf 2.024 C CYS 44 C SG CYS 43 1_555 C CYS 105 C SG CYS 95 1_555 disulf 2.028 C CYS 50 C SG CYS 49 1_555 C CYS 133 C SG CYS 122 1_555 disulf 2.029 C CYS 51 C SG CYS 50 1_555 C CYS 98 C SG CYS 88 1_555 disulf 2.033 C CYS 61 C SG CYS 57 1_555 C CYS 91 C SG CYS 81 1_555 disulf 2.030 C CYS 84 C SG CYS 75 1_555 C CYS 96 C SG CYS 86 1_555 disulf 2.028 D CYS 27 D SG CYS 26 1_555 D CYS 126 D SG CYS 115 1_555 disulf 2.026 D CYS 29 D SG CYS 28 1_555 D CYS 45 D SG CYS 44 1_555 disulf 2.027 D CYS 44 D SG CYS 43 1_555 D CYS 105 D SG CYS 95 1_555 disulf 2.020 D CYS 50 D SG CYS 49 1_555 D CYS 133 D SG CYS 122 1_555 disulf 2.036 D CYS 51 D SG CYS 50 1_555 D CYS 98 D SG CYS 88 1_555 disulf 2.028 D CYS 61 D SG CYS 57 1_555 D CYS 91 D SG CYS 81 1_555 disulf 2.024 D CYS 84 D SG CYS 75 1_555 D CYS 96 D SG CYS 86 1_555 metalc 2.968 A GLY 26 A O GLY 25 1_555 A CD 602 G CD CD 1_555 metalc 2.623 A HIS 48 A ND1 HIS 47 1_555 A CD 601 F CD CD 1_555 metalc 2.827 A ASP 49 A OD2 ASP 48 1_555 A CD 601 F CD CD 1_555 metalc 3.097 A ASP 122 A OD1 ASP 112 1_555 A CD 602 G CD CD 1_555 metalc 2.721 A CD 601 F CD CD 1_555 A HOH 603 M O HOH 1_555 metalc 2.861 A CD 601 F CD CD 1_555 A HOH 604 M O HOH 1_555 metalc 2.753 B HIS 48 B ND1 HIS 47 1_555 B CD 602 I CD CD 1_555 metalc 2.846 B ASP 49 B OD2 ASP 48 1_555 B CD 602 I CD CD 1_555 metalc 2.962 B CD 602 I CD CD 1_555 B HOH 610 N O HOH 1_555 metalc 2.514 C HIS 48 C ND1 HIS 47 1_555 C CD 134 J CD CD 1_555 metalc 2.853 C ASP 49 C OD2 ASP 48 1_555 C CD 134 J CD CD 1_555 metalc 2.779 C CD 134 J CD CD 1_555 C HOH 144 O O HOH 1_555 metalc 2.531 D HIS 48 D ND1 HIS 47 1_555 D CD 134 K CD CD 1_555 metalc 3.037 D ASP 49 D OD2 ASP 48 1_555 D CD 134 K CD CD 1_555 metalc 3.014 D ASP 122 D OD1 ASP 112 1_555 D CD 135 L CD CD 1_555 metalc 2.871 D CD 134 K CD CD 1_555 D HOH 136 P O HOH 1_555 metalc 2.483 D CD 134 K CD CD 1_555 D HOH 147 P O HOH 1_555 HYDROLASE VENOM, PHOSPHOLIPASE A2, CADMIUM, CATALYTIC MECHANISM, HYDROLASE PA21B_AGKHA UNP 1 P04417 1 122 1C1J 1 122 P04417 A 1 1 112 1 122 1C1J 1 122 P04417 B 1 1 112 1 122 1C1J 1 122 P04417 C 1 1 112 1 122 1C1J 1 122 P04417 D 1 1 112 1 ILE conflict VAL 19 1C1J A P04417 UNP 18 1 ASP conflict ASN 39 1C1J A P04417 UNP 38 1 LYS conflict ASP 67 1C1J A P04417 UNP 58 1 ASP conflict THR 81 1C1J A P04417 UNP 72 1 ILE conflict VAL 95 1C1J A P04417 UNP 85 2 ILE conflict VAL 19 1C1J B P04417 UNP 18 2 ASP conflict ASN 39 1C1J B P04417 UNP 38 2 LYS conflict ASP 67 1C1J B P04417 UNP 58 2 ASP conflict THR 81 1C1J B P04417 UNP 72 2 ILE conflict VAL 95 1C1J B P04417 UNP 85 3 ILE conflict VAL 19 1C1J C P04417 UNP 18 3 ASP conflict ASN 39 1C1J C P04417 UNP 38 3 LYS conflict ASP 67 1C1J C P04417 UNP 58 3 ASP conflict THR 81 1C1J C P04417 UNP 72 3 ILE conflict VAL 95 1C1J C P04417 UNP 85 4 ILE conflict VAL 19 1C1J D P04417 UNP 18 4 ASP conflict ASN 39 1C1J D P04417 UNP 38 4 LYS conflict ASP 67 1C1J D P04417 UNP 58 4 ASP conflict THR 81 1C1J D P04417 UNP 72 4 ILE conflict VAL 95 1C1J D P04417 UNP 85 2 2 2 2 anti-parallel anti-parallel anti-parallel anti-parallel A TYR 75 A TYR 66 A SER 76 A SER 67 A VAL 83 A VAL 74 A CYS 84 A CYS 75 B TYR 75 B TYR 66 B SER 76 B SER 67 B VAL 83 B VAL 74 B CYS 84 B CYS 75 C TYR 75 C TYR 66 C SER 76 C SER 67 C VAL 83 C VAL 74 C CYS 84 C CYS 75 D TYR 75 D TYR 66 D SER 76 D SER 67 D VAL 83 D VAL 74 D CYS 84 D CYS 75 5 monoclinic C 1 2 1