0.024845
0.000000
0.005055
0.000000
0.008866
0.000000
0.000000
0.000000
0.021731
0.00000
0.00000
0.00000
Greasley, S.E.
Yamashita, M.M.
Cai, H.
Benkovic, S.J.
Boger, D.L.
Wilson, I.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
101.50
90.00
40.250
112.790
46.960
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C7 H13 N2 O8 P -2
284.160
GLYCINAMIDE RIBONUCLEOTIDE
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C23 H22 N4 O8
482.443
10-FORMYL-5,8,10-TRIDEAZAFOLIC ACID
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
S
C
N
89
N
O
N
90
R
C
N
91
N
O
N
92
R
C
N
93
N
O
N
94
R
C
N
95
N
C
N
96
N
O
N
97
N
N
N
98
N
C
N
99
N
O
N
100
N
C
N
101
N
N
N
102
N
P
N
103
N
O
N
104
N
O
N
105
N
O
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
H
N
117
N
H
N
118
N
H
N
119
N
N
N
120
S
C
N
121
N
C
N
122
N
O
N
123
N
C
N
124
N
C
N
125
N
C
N
126
N
O
N
127
N
N
N
128
N
O
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
N
N
140
S
C
N
141
N
C
N
142
N
O
N
143
N
C
N
144
N
C
N
145
N
C
N
146
N
O
N
147
N
O
N
148
N
O
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
N
N
159
N
C
N
160
N
C
N
161
N
O
N
162
N
O
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
N
N
169
S
C
N
170
N
C
N
171
N
O
N
172
N
C
Y
173
N
C
Y
174
N
N
Y
175
N
C
Y
176
N
C
Y
177
N
N
N
178
N
O
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
186
N
H
N
187
N
H
N
188
N
H
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
N
N
193
S
C
N
194
N
C
N
195
N
O
N
196
S
C
N
197
N
C
N
198
N
C
N
199
N
C
N
200
N
O
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
H
N
212
N
H
N
213
N
H
N
214
N
N
N
215
S
C
N
216
N
C
N
217
N
O
N
218
N
C
N
219
N
C
N
220
N
C
N
221
N
C
N
222
N
O
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
H
N
231
N
H
N
232
N
H
N
233
N
H
N
234
N
H
N
235
N
H
N
236
N
N
N
237
S
C
N
238
N
C
N
239
N
O
N
240
N
C
N
241
N
C
N
242
N
C
N
243
N
C
N
244
N
N
N
245
N
O
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
H
N
256
N
H
N
257
N
H
N
258
N
H
N
259
N
H
N
260
N
H
N
261
N
N
N
262
S
C
N
263
N
C
N
264
N
O
N
265
N
C
N
266
N
C
N
267
N
S
N
268
N
C
N
269
N
O
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
H
N
278
N
H
N
279
N
H
N
280
N
H
Y
281
N
N
Y
282
N
C
N
283
N
N
Y
284
N
N
Y
285
N
C
N
286
N
O
Y
287
N
C
Y
288
N
C
Y
289
N
C
Y
290
N
C
Y
291
N
C
Y
292
N
C
N
293
N
C
N
294
S
C
Y
295
N
C
Y
296
N
C
Y
297
N
C
Y
298
N
C
Y
299
N
C
Y
300
N
C
N
301
N
C
N
302
N
O
N
303
N
N
N
304
S
C
N
305
N
C
N
306
N
C
N
307
N
C
N
308
N
O
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
O
N
313
N
C
N
314
N
O
N
315
N
O
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
N
N
339
S
C
N
340
N
C
N
341
N
O
N
342
N
C
Y
343
N
C
Y
344
N
C
Y
345
N
C
Y
346
N
C
Y
347
N
C
Y
348
N
C
N
349
N
O
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
N
N
362
S
C
N
363
N
C
N
364
N
O
N
365
N
C
N
366
N
C
N
367
N
C
N
368
N
O
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
H
N
377
N
H
N
378
N
N
N
379
S
C
N
380
N
C
N
381
N
O
N
382
N
C
N
383
N
O
N
384
N
O
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
N
N
393
S
C
N
394
N
C
N
395
N
O
N
396
R
C
N
397
N
O
N
398
N
C
N
399
N
O
N
400
N
H
N
401
N
H
N
402
N
H
N
403
N
H
N
404
N
H
N
405
N
H
N
406
N
H
N
407
N
H
N
408
N
H
N
409
N
N
N
410
S
C
N
411
N
C
N
412
N
O
N
413
N
C
Y
414
N
C
Y
415
N
C
Y
416
N
C
Y
417
N
N
Y
418
N
C
Y
419
N
C
Y
420
N
C
Y
421
N
C
Y
422
N
C
N
423
N
O
N
424
N
H
N
425
N
H
N
426
N
H
N
427
N
H
N
428
N
H
N
429
N
H
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
N
N
437
S
C
N
438
N
C
N
439
N
O
N
440
N
C
Y
441
N
C
Y
442
N
C
Y
443
N
C
Y
444
N
C
Y
445
N
C
Y
446
N
C
N
447
N
O
N
448
N
O
N
449
N
H
N
450
N
H
N
451
N
H
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
N
N
461
S
C
N
462
N
C
N
463
N
O
N
464
N
C
N
465
N
C
N
466
N
C
N
467
N
O
N
468
N
H
N
469
N
H
N
470
N
H
N
471
N
H
N
472
N
H
N
473
N
H
N
474
N
H
N
475
N
H
N
476
N
H
N
477
N
H
N
478
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
doub
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
doub
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
doub
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
doub
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
doub
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
doub
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
doub
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
Y
171
N
sing
Y
172
N
doub
Y
173
N
doub
N
174
N
sing
Y
175
N
sing
N
176
N
sing
Y
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
doub
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
doub
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
doub
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
sing
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
doub
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
Y
268
N
doub
Y
269
N
sing
N
270
N
sing
Y
271
N
sing
N
272
N
sing
N
273
N
sing
Y
274
N
sing
N
275
N
sing
N
276
N
doub
Y
277
N
sing
Y
278
N
doub
Y
279
N
sing
Y
280
N
sing
N
281
N
sing
Y
282
N
doub
N
283
N
sing
Y
284
N
sing
N
285
N
sing
Y
286
N
doub
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
Y
294
N
doub
Y
295
N
sing
N
296
N
sing
Y
297
N
sing
N
298
N
sing
Y
299
N
doub
N
300
N
sing
Y
301
N
sing
Y
302
N
doub
N
303
N
sing
N
304
N
sing
N
305
N
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
doub
N
319
N
sing
N
320
N
sing
N
321
N
doub
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
doub
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
Y
338
N
doub
Y
339
N
sing
Y
340
N
sing
N
341
N
sing
Y
342
N
doub
N
343
N
sing
Y
344
N
doub
N
345
N
sing
Y
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
doub
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
sing
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
doub
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
doub
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
sing
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
N
395
N
sing
N
396
N
sing
N
397
N
sing
N
398
N
sing
N
399
N
sing
N
400
N
sing
N
401
N
sing
N
402
N
doub
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
Y
407
N
doub
Y
408
N
sing
Y
409
N
sing
N
410
N
sing
Y
411
N
doub
Y
412
N
sing
Y
413
N
sing
N
414
N
sing
Y
415
N
sing
Y
416
N
doub
N
417
N
sing
Y
418
N
doub
N
419
N
sing
Y
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
doub
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
Y
435
N
doub
Y
436
N
sing
Y
437
N
sing
N
438
N
sing
Y
439
N
doub
N
440
N
sing
Y
441
N
doub
N
442
N
sing
Y
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
N
448
N
sing
N
449
N
sing
N
450
N
sing
N
451
N
sing
N
452
N
sing
N
453
N
sing
N
454
N
doub
N
455
N
sing
N
456
N
sing
N
457
N
sing
N
458
N
sing
N
459
N
sing
N
460
N
sing
N
461
N
sing
N
462
N
sing
N
463
N
sing
N
464
N
sing
N
465
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
38
16783
16793
10.1021/bi991888a
10606510
New insights into inhibitor design from the crystal structure and NMR studies of Escherichia coli GAR transformylase in complex with beta-GAR and 10-formyl-5,8,10-trideazafolic acid.
1999
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
281
485
499
10.1006/jmbi.1998.1931
A pH-dependent stabilization of an active site loop observed from low and high pH crystal structures of mutant monomeric glycinamide ribonucleotide transformylase at 1.8-1.9A
1998
UK
Bioorg.Med.Chem.
BMECEP
1200
0968-0896
5
1817
1830
10.1016/S0968-0896(97)00120-X
10-Formyl-5,8,10-trideazafolic acid (10-formyl-TDAF): a potent inhibitor of glycinamide ribonucleotide transformylase.
1997
10.2210/pdb1c2t/pdb
pdb_00001c2t
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
94
1
IMAGE PLATE
1997-07-10
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
0.98
1.0
BL9-1
SSRL
0.98
SYNCHROTRON
SSRL BEAMLINE BL9-1
23266.254
GLYCINAMIDE RIBONUCLEOTIDE TRANSFORMYLASE
2.1.2.2
2
man
polymer
482.443
10-FORMYL-5,8,10-TRIDEAZAFOLIC ACID
2
syn
non-polymer
284.160
GLYCINAMIDE RIBONUCLEOTIDE
2
syn
non-polymer
18.015
water
197
nat
water
no
no
MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAP
DVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGD
SEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLDGQRLPPQGYAADE
MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAP
DVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGD
SEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLDGQRLPPQGYAADE
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
sample
562
Escherichia coli
562
Escherichia coli
PLASMID
PJS167
1
2.24
45.18
VAPOR DIFFUSION, SITTING DROP
7.2
PEG 3350, IMIDAZOLE MALATE, CALCIUM CHLORIDE, MPD, pH 7.2, VAPOR DIFFUSION, SITTING DROP, temperature 22.0K, temperature 295K
295
software
chem_comp_atom
chem_comp_bond
database_2
struct_site
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
1
0
2000-01-05
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
1
4
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
C3E CONTAINS THE SAME PROTEIN COMPLEXED TO THE (10R)-10-FORMYL-TDAF AND BETA GAR
RCSB
Y
RCSB
1999-07-26
REL
REL
NHS
10-FORMYL-5,8,10-TRIDEAZAFOLIC ACID
GAR
GLYCINAMIDE RIBONUCLEOTIDE
HOH
water
NHS
220
2
NHS
NHS
222
A
GAR
221
3
GAR
GAR
223
A
NHS
220
2
NHS
NHS
220
B
GAR
221
3
GAR
GAR
221
B
HOH
5
4
HOH
HOH
224
A
HOH
8
4
HOH
HOH
225
A
HOH
10
4
HOH
HOH
226
A
HOH
13
4
HOH
HOH
227
A
HOH
14
4
HOH
HOH
228
A
HOH
15
4
HOH
HOH
229
A
HOH
22
4
HOH
HOH
230
A
HOH
23
4
HOH
HOH
231
A
HOH
25
4
HOH
HOH
232
A
HOH
26
4
HOH
HOH
233
A
HOH
33
4
HOH
HOH
234
A
HOH
38
4
HOH
HOH
235
A
HOH
39
4
HOH
HOH
236
A
HOH
40
4
HOH
HOH
237
A
HOH
41
4
HOH
HOH
238
A
HOH
44
4
HOH
HOH
239
A
HOH
45
4
HOH
HOH
240
A
HOH
46
4
HOH
HOH
241
A
HOH
48
4
HOH
HOH
242
A
HOH
50
4
HOH
HOH
243
A
HOH
51
4
HOH
HOH
244
A
HOH
55
4
HOH
HOH
245
A
HOH
56
4
HOH
HOH
246
A
HOH
57
4
HOH
HOH
247
A
HOH
58
4
HOH
HOH
248
A
HOH
59
4
HOH
HOH
249
A
HOH
63
4
HOH
HOH
250
A
HOH
69
4
HOH
HOH
251
A
HOH
70
4
HOH
HOH
252
A
HOH
71
4
HOH
HOH
253
A
HOH
72
4
HOH
HOH
254
A
HOH
75
4
HOH
HOH
255
A
HOH
80
4
HOH
HOH
256
A
HOH
81
4
HOH
HOH
257
A
HOH
83
4
HOH
HOH
258
A
HOH
86
4
HOH
HOH
259
A
HOH
88
4
HOH
HOH
260
A
HOH
90
4
HOH
HOH
261
A
HOH
95
4
HOH
HOH
262
A
HOH
97
4
HOH
HOH
263
A
HOH
98
4
HOH
HOH
264
A
HOH
100
4
HOH
HOH
265
A
HOH
101
4
HOH
HOH
266
A
HOH
105
4
HOH
HOH
267
A
HOH
107
4
HOH
HOH
268
A
HOH
109
4
HOH
HOH
269
A
HOH
110
4
HOH
HOH
270
A
HOH
112
4
HOH
HOH
271
A
HOH
113
4
HOH
HOH
272
A
HOH
114
4
HOH
HOH
273
A
HOH
115
4
HOH
HOH
274
A
HOH
120
4
HOH
HOH
275
A
HOH
123
4
HOH
HOH
276
A
HOH
124
4
HOH
HOH
277
A
HOH
126
4
HOH
HOH
278
A
HOH
127
4
HOH
HOH
279
A
HOH
129
4
HOH
HOH
280
A
HOH
130
4
HOH
HOH
281
A
HOH
132
4
HOH
HOH
282
A
HOH
134
4
HOH
HOH
283
A
HOH
136
4
HOH
HOH
284
A
HOH
137
4
HOH
HOH
285
A
HOH
138
4
HOH
HOH
286
A
HOH
140
4
HOH
HOH
287
A
HOH
143
4
HOH
HOH
288
A
HOH
144
4
HOH
HOH
289
A
HOH
145
4
HOH
HOH
290
A
HOH
150
4
HOH
HOH
291
A
HOH
151
4
HOH
HOH
292
A
HOH
153
4
HOH
HOH
293
A
HOH
156
4
HOH
HOH
294
A
HOH
158
4
HOH
HOH
295
A
HOH
160
4
HOH
HOH
296
A
HOH
161
4
HOH
HOH
297
A
HOH
162
4
HOH
HOH
298
A
HOH
163
4
HOH
HOH
299
A
HOH
164
4
HOH
HOH
300
A
HOH
167
4
HOH
HOH
301
A
HOH
168
4
HOH
HOH
302
A
HOH
170
4
HOH
HOH
303
A
HOH
173
4
HOH
HOH
304
A
HOH
175
4
HOH
HOH
305
A
HOH
176
4
HOH
HOH
306
A
HOH
177
4
HOH
HOH
307
A
HOH
178
4
HOH
HOH
308
A
HOH
180
4
HOH
HOH
309
A
HOH
184
4
HOH
HOH
310
A
HOH
186
4
HOH
HOH
311
A
HOH
190
4
HOH
HOH
312
A
HOH
191
4
HOH
HOH
313
A
HOH
193
4
HOH
HOH
314
A
HOH
194
4
HOH
HOH
315
A
HOH
195
4
HOH
HOH
316
A
HOH
196
4
HOH
HOH
317
A
HOH
1
4
HOH
HOH
222
B
HOH
2
4
HOH
HOH
223
B
HOH
3
4
HOH
HOH
224
B
HOH
4
4
HOH
HOH
225
B
HOH
6
4
HOH
HOH
226
B
HOH
7
4
HOH
HOH
227
B
HOH
9
4
HOH
HOH
228
B
HOH
11
4
HOH
HOH
229
B
HOH
12
4
HOH
HOH
230
B
HOH
16
4
HOH
HOH
231
B
HOH
17
4
HOH
HOH
232
B
HOH
18
4
HOH
HOH
233
B
HOH
19
4
HOH
HOH
234
B
HOH
20
4
HOH
HOH
235
B
HOH
21
4
HOH
HOH
236
B
HOH
24
4
HOH
HOH
237
B
HOH
27
4
HOH
HOH
238
B
HOH
28
4
HOH
HOH
239
B
HOH
29
4
HOH
HOH
240
B
HOH
30
4
HOH
HOH
241
B
HOH
31
4
HOH
HOH
242
B
HOH
32
4
HOH
HOH
243
B
HOH
34
4
HOH
HOH
244
B
HOH
35
4
HOH
HOH
245
B
HOH
36
4
HOH
HOH
246
B
HOH
37
4
HOH
HOH
247
B
HOH
42
4
HOH
HOH
248
B
HOH
43
4
HOH
HOH
249
B
HOH
47
4
HOH
HOH
250
B
HOH
49
4
HOH
HOH
251
B
HOH
52
4
HOH
HOH
252
B
HOH
53
4
HOH
HOH
253
B
HOH
54
4
HOH
HOH
254
B
HOH
60
4
HOH
HOH
255
B
HOH
61
4
HOH
HOH
256
B
HOH
62
4
HOH
HOH
257
B
HOH
64
4
HOH
HOH
258
B
HOH
65
4
HOH
HOH
259
B
HOH
66
4
HOH
HOH
260
B
HOH
67
4
HOH
HOH
261
B
HOH
68
4
HOH
HOH
262
B
HOH
73
4
HOH
HOH
263
B
HOH
74
4
HOH
HOH
264
B
HOH
76
4
HOH
HOH
265
B
HOH
77
4
HOH
HOH
266
B
HOH
78
4
HOH
HOH
267
B
HOH
79
4
HOH
HOH
268
B
HOH
82
4
HOH
HOH
269
B
HOH
84
4
HOH
HOH
270
B
HOH
85
4
HOH
HOH
271
B
HOH
87
4
HOH
HOH
272
B
HOH
89
4
HOH
HOH
273
B
HOH
91
4
HOH
HOH
274
B
HOH
92
4
HOH
HOH
275
B
HOH
93
4
HOH
HOH
276
B
HOH
94
4
HOH
HOH
277
B
HOH
96
4
HOH
HOH
278
B
HOH
99
4
HOH
HOH
279
B
HOH
102
4
HOH
HOH
280
B
HOH
103
4
HOH
HOH
281
B
HOH
104
4
HOH
HOH
282
B
HOH
106
4
HOH
HOH
283
B
HOH
108
4
HOH
HOH
284
B
HOH
111
4
HOH
HOH
285
B
HOH
116
4
HOH
HOH
286
B
HOH
117
4
HOH
HOH
287
B
HOH
118
4
HOH
HOH
288
B
HOH
119
4
HOH
HOH
289
B
HOH
121
4
HOH
HOH
290
B
HOH
122
4
HOH
HOH
291
B
HOH
125
4
HOH
HOH
292
B
HOH
128
4
HOH
HOH
293
B
HOH
131
4
HOH
HOH
294
B
HOH
133
4
HOH
HOH
295
B
HOH
135
4
HOH
HOH
296
B
HOH
139
4
HOH
HOH
297
B
HOH
141
4
HOH
HOH
298
B
HOH
142
4
HOH
HOH
299
B
HOH
146
4
HOH
HOH
300
B
HOH
147
4
HOH
HOH
301
B
HOH
148
4
HOH
HOH
302
B
HOH
149
4
HOH
HOH
303
B
HOH
152
4
HOH
HOH
304
B
HOH
154
4
HOH
HOH
305
B
HOH
155
4
HOH
HOH
306
B
HOH
157
4
HOH
HOH
307
B
HOH
159
4
HOH
HOH
308
B
HOH
165
4
HOH
HOH
309
B
HOH
166
4
HOH
HOH
310
B
HOH
169
4
HOH
HOH
311
B
HOH
171
4
HOH
HOH
312
B
HOH
172
4
HOH
HOH
313
B
HOH
174
4
HOH
HOH
314
B
HOH
179
4
HOH
HOH
315
B
HOH
181
4
HOH
HOH
316
B
HOH
182
4
HOH
HOH
317
B
HOH
183
4
HOH
HOH
318
B
HOH
185
4
HOH
HOH
319
B
HOH
187
4
HOH
HOH
320
B
HOH
188
4
HOH
HOH
321
B
HOH
189
4
HOH
HOH
322
B
HOH
192
4
HOH
HOH
323
B
HOH
197
4
HOH
HOH
324
B
MET
1
n
1
MET
1
A
ASN
2
n
2
ASN
2
A
ILE
3
n
3
ILE
3
A
VAL
4
n
4
VAL
4
A
VAL
5
n
5
VAL
5
A
LEU
6
n
6
LEU
6
A
ILE
7
n
7
ILE
7
A
SER
8
n
8
SER
8
A
GLY
9
n
9
GLY
9
A
ASN
10
n
10
ASN
10
A
GLY
11
n
11
GLY
11
A
SER
12
n
12
SER
12
A
ASN
13
n
13
ASN
13
A
LEU
14
n
14
LEU
14
A
GLN
15
n
15
GLN
15
A
ALA
16
n
16
ALA
16
A
ILE
17
n
17
ILE
17
A
ILE
18
n
18
ILE
18
A
ASP
19
n
19
ASP
19
A
ALA
20
n
20
ALA
20
A
CYS
21
n
21
CYS
21
A
LYS
22
n
22
LYS
22
A
THR
23
n
23
THR
23
A
ASN
24
n
24
ASN
24
A
LYS
25
n
25
LYS
25
A
ILE
26
n
26
ILE
26
A
LYS
27
n
27
LYS
27
A
GLY
28
n
28
GLY
28
A
THR
29
n
29
THR
29
A
VAL
30
n
30
VAL
30
A
ARG
31
n
31
ARG
31
A
ALA
32
n
32
ALA
32
A
VAL
33
n
33
VAL
33
A
PHE
34
n
34
PHE
34
A
SER
35
n
35
SER
35
A
ASN
36
n
36
ASN
36
A
LYS
37
n
37
LYS
37
A
ALA
38
n
38
ALA
38
A
ASP
39
n
39
ASP
39
A
ALA
40
n
40
ALA
40
A
PHE
41
n
41
PHE
41
A
GLY
42
n
42
GLY
42
A
LEU
43
n
43
LEU
43
A
GLU
44
n
44
GLU
44
A
ARG
45
n
45
ARG
45
A
ALA
46
n
46
ALA
46
A
ARG
47
n
47
ARG
47
A
GLN
48
n
48
GLN
48
A
ALA
49
n
49
ALA
49
A
GLY
50
n
50
GLY
50
A
ILE
51
n
51
ILE
51
A
ALA
52
n
52
ALA
52
A
THR
53
n
53
THR
53
A
HIS
54
n
54
HIS
54
A
THR
55
n
55
THR
55
A
LEU
56
n
56
LEU
56
A
ILE
57
n
57
ILE
57
A
ALA
58
n
58
ALA
58
A
SER
59
n
59
SER
59
A
ALA
60
n
60
ALA
60
A
PHE
61
n
61
PHE
61
A
ASP
62
n
62
ASP
62
A
SER
63
n
63
SER
63
A
ARG
64
n
64
ARG
64
A
GLU
65
n
65
GLU
65
A
ALA
66
n
66
ALA
66
A
TYR
67
n
67
TYR
67
A
ASP
68
n
68
ASP
68
A
ARG
69
n
69
ARG
69
A
GLU
70
n
70
GLU
70
A
LEU
71
n
71
LEU
71
A
ILE
72
n
72
ILE
72
A
HIS
73
n
73
HIS
73
A
GLU
74
n
74
GLU
74
A
ILE
75
n
75
ILE
75
A
ASP
76
n
76
ASP
76
A
MET
77
n
77
MET
77
A
TYR
78
n
78
TYR
78
A
ALA
79
n
79
ALA
79
A
PRO
80
n
80
PRO
80
A
ASP
81
n
81
ASP
81
A
VAL
82
n
82
VAL
82
A
VAL
83
n
83
VAL
83
A
VAL
84
n
84
VAL
84
A
LEU
85
n
85
LEU
85
A
ALA
86
n
86
ALA
86
A
GLY
87
n
87
GLY
87
A
PHE
88
n
88
PHE
88
A
MET
89
n
89
MET
89
A
ARG
90
n
90
ARG
90
A
ILE
91
n
91
ILE
91
A
LEU
92
n
92
LEU
92
A
SER
93
n
93
SER
93
A
PRO
94
n
94
PRO
94
A
ALA
95
n
95
ALA
95
A
PHE
96
n
96
PHE
96
A
VAL
97
n
97
VAL
97
A
SER
98
n
98
SER
98
A
HIS
99
n
99
HIS
99
A
TYR
100
n
100
TYR
100
A
ALA
101
n
101
ALA
101
A
GLY
102
n
102
GLY
102
A
ARG
103
n
103
ARG
103
A
LEU
104
n
104
LEU
104
A
LEU
105
n
105
LEU
105
A
ASN
106
n
106
ASN
106
A
ILE
107
n
107
ILE
107
A
HIS
108
n
108
HIS
108
A
PRO
109
n
109
PRO
109
A
SER
110
n
110
SER
110
A
LEU
111
n
111
LEU
111
A
LEU
112
n
112
LEU
112
A
PRO
113
n
113
PRO
113
A
LYS
114
n
114
LYS
114
A
TYR
115
n
115
TYR
115
A
PRO
116
n
116
PRO
116
A
GLY
117
n
117
GLY
117
A
LEU
118
n
118
LEU
118
A
HIS
119
n
119
HIS
119
A
THR
120
n
120
THR
120
A
HIS
121
n
121
HIS
121
A
ARG
122
n
122
ARG
122
A
GLN
123
n
123
GLN
123
A
ALA
124
n
124
ALA
124
A
LEU
125
n
125
LEU
125
A
GLU
126
n
126
GLU
126
A
ASN
127
n
127
ASN
127
A
GLY
128
n
128
GLY
128
A
ASP
129
n
129
ASP
129
A
GLU
130
n
130
GLU
130
A
GLU
131
n
131
GLU
131
A
HIS
132
n
132
HIS
132
A
GLY
133
n
133
GLY
133
A
THR
134
n
134
THR
134
A
SER
135
n
135
SER
135
A
VAL
136
n
136
VAL
136
A
HIS
137
n
137
HIS
137
A
PHE
138
n
138
PHE
138
A
VAL
139
n
139
VAL
139
A
THR
140
n
140
THR
140
A
ASP
141
n
141
ASP
141
A
GLU
142
n
142
GLU
142
A
LEU
143
n
143
LEU
143
A
ASP
144
n
144
ASP
144
A
GLY
145
n
145
GLY
145
A
GLY
146
n
146
GLY
146
A
PRO
147
n
147
PRO
147
A
VAL
148
n
148
VAL
148
A
ILE
149
n
149
ILE
149
A
LEU
150
n
150
LEU
150
A
GLN
151
n
151
GLN
151
A
ALA
152
n
152
ALA
152
A
LYS
153
n
153
LYS
153
A
VAL
154
n
154
VAL
154
A
PRO
155
n
155
PRO
155
A
VAL
156
n
156
VAL
156
A
PHE
157
n
157
PHE
157
A
ALA
158
n
158
ALA
158
A
GLY
159
n
159
GLY
159
A
ASP
160
n
160
ASP
160
A
SER
161
n
161
SER
161
A
GLU
162
n
162
GLU
162
A
ASP
163
n
163
ASP
163
A
ASP
164
n
164
ASP
164
A
ILE
165
n
165
ILE
165
A
THR
166
n
166
THR
166
A
ALA
167
n
167
ALA
167
A
ARG
168
n
168
ARG
168
A
VAL
169
n
169
VAL
169
A
GLN
170
n
170
GLN
170
A
THR
171
n
171
THR
171
A
GLN
172
n
172
GLN
172
A
GLU
173
n
173
GLU
173
A
HIS
174
n
174
HIS
174
A
ALA
175
n
175
ALA
175
A
ILE
176
n
176
ILE
176
A
TYR
177
n
177
TYR
177
A
PRO
178
n
178
PRO
178
A
LEU
179
n
179
LEU
179
A
VAL
180
n
180
VAL
180
A
ILE
181
n
181
ILE
181
A
SER
182
n
182
SER
182
A
TRP
183
n
183
TRP
183
A
PHE
184
n
184
PHE
184
A
ALA
185
n
185
ALA
185
A
ASP
186
n
186
ASP
186
A
GLY
187
n
187
GLY
187
A
ARG
188
n
188
ARG
188
A
LEU
189
n
189
LEU
189
A
LYS
190
n
190
LYS
190
A
MET
191
n
191
MET
191
A
HIS
192
n
192
HIS
192
A
GLU
193
n
193
GLU
193
A
ASN
194
n
194
ASN
194
A
ALA
195
n
195
ALA
195
A
ALA
196
n
196
ALA
196
A
TRP
197
n
197
TRP
197
A
LEU
198
n
198
LEU
198
A
ASP
199
n
199
ASP
199
A
GLY
200
n
200
GLY
200
A
GLN
201
n
201
GLN
201
A
ARG
202
n
202
ARG
202
A
LEU
203
n
203
LEU
203
A
PRO
204
n
204
PRO
204
A
PRO
205
n
205
PRO
205
A
GLN
206
n
206
GLN
206
A
GLY
207
n
207
GLY
207
A
TYR
208
n
208
TYR
208
A
ALA
209
n
209
ALA
209
A
n
210
210
A
n
211
211
A
n
212
212
A
MET
1
n
1
MET
1
B
ASN
2
n
2
ASN
2
B
ILE
3
n
3
ILE
3
B
VAL
4
n
4
VAL
4
B
VAL
5
n
5
VAL
5
B
LEU
6
n
6
LEU
6
B
ILE
7
n
7
ILE
7
B
SER
8
n
8
SER
8
B
GLY
9
n
9
GLY
9
B
ASN
10
n
10
ASN
10
B
GLY
11
n
11
GLY
11
B
SER
12
n
12
SER
12
B
ASN
13
n
13
ASN
13
B
LEU
14
n
14
LEU
14
B
GLN
15
n
15
GLN
15
B
ALA
16
n
16
ALA
16
B
ILE
17
n
17
ILE
17
B
ILE
18
n
18
ILE
18
B
ASP
19
n
19
ASP
19
B
ALA
20
n
20
ALA
20
B
CYS
21
n
21
CYS
21
B
LYS
22
n
22
LYS
22
B
THR
23
n
23
THR
23
B
ASN
24
n
24
ASN
24
B
LYS
25
n
25
LYS
25
B
ILE
26
n
26
ILE
26
B
LYS
27
n
27
LYS
27
B
GLY
28
n
28
GLY
28
B
THR
29
n
29
THR
29
B
VAL
30
n
30
VAL
30
B
ARG
31
n
31
ARG
31
B
ALA
32
n
32
ALA
32
B
VAL
33
n
33
VAL
33
B
PHE
34
n
34
PHE
34
B
SER
35
n
35
SER
35
B
ASN
36
n
36
ASN
36
B
LYS
37
n
37
LYS
37
B
ALA
38
n
38
ALA
38
B
ASP
39
n
39
ASP
39
B
ALA
40
n
40
ALA
40
B
PHE
41
n
41
PHE
41
B
GLY
42
n
42
GLY
42
B
LEU
43
n
43
LEU
43
B
GLU
44
n
44
GLU
44
B
ARG
45
n
45
ARG
45
B
ALA
46
n
46
ALA
46
B
ARG
47
n
47
ARG
47
B
GLN
48
n
48
GLN
48
B
ALA
49
n
49
ALA
49
B
GLY
50
n
50
GLY
50
B
ILE
51
n
51
ILE
51
B
ALA
52
n
52
ALA
52
B
THR
53
n
53
THR
53
B
HIS
54
n
54
HIS
54
B
THR
55
n
55
THR
55
B
LEU
56
n
56
LEU
56
B
ILE
57
n
57
ILE
57
B
ALA
58
n
58
ALA
58
B
SER
59
n
59
SER
59
B
ALA
60
n
60
ALA
60
B
PHE
61
n
61
PHE
61
B
ASP
62
n
62
ASP
62
B
SER
63
n
63
SER
63
B
ARG
64
n
64
ARG
64
B
GLU
65
n
65
GLU
65
B
ALA
66
n
66
ALA
66
B
TYR
67
n
67
TYR
67
B
ASP
68
n
68
ASP
68
B
ARG
69
n
69
ARG
69
B
GLU
70
n
70
GLU
70
B
LEU
71
n
71
LEU
71
B
ILE
72
n
72
ILE
72
B
HIS
73
n
73
HIS
73
B
GLU
74
n
74
GLU
74
B
ILE
75
n
75
ILE
75
B
ASP
76
n
76
ASP
76
B
MET
77
n
77
MET
77
B
TYR
78
n
78
TYR
78
B
ALA
79
n
79
ALA
79
B
PRO
80
n
80
PRO
80
B
ASP
81
n
81
ASP
81
B
VAL
82
n
82
VAL
82
B
VAL
83
n
83
VAL
83
B
VAL
84
n
84
VAL
84
B
LEU
85
n
85
LEU
85
B
ALA
86
n
86
ALA
86
B
GLY
87
n
87
GLY
87
B
PHE
88
n
88
PHE
88
B
MET
89
n
89
MET
89
B
ARG
90
n
90
ARG
90
B
ILE
91
n
91
ILE
91
B
LEU
92
n
92
LEU
92
B
SER
93
n
93
SER
93
B
PRO
94
n
94
PRO
94
B
ALA
95
n
95
ALA
95
B
PHE
96
n
96
PHE
96
B
VAL
97
n
97
VAL
97
B
SER
98
n
98
SER
98
B
HIS
99
n
99
HIS
99
B
TYR
100
n
100
TYR
100
B
ALA
101
n
101
ALA
101
B
GLY
102
n
102
GLY
102
B
ARG
103
n
103
ARG
103
B
LEU
104
n
104
LEU
104
B
LEU
105
n
105
LEU
105
B
ASN
106
n
106
ASN
106
B
ILE
107
n
107
ILE
107
B
HIS
108
n
108
HIS
108
B
PRO
109
n
109
PRO
109
B
SER
110
n
110
SER
110
B
LEU
111
n
111
LEU
111
B
LEU
112
n
112
LEU
112
B
PRO
113
n
113
PRO
113
B
LYS
114
n
114
LYS
114
B
TYR
115
n
115
TYR
115
B
PRO
116
n
116
PRO
116
B
GLY
117
n
117
GLY
117
B
LEU
118
n
118
LEU
118
B
HIS
119
n
119
HIS
119
B
THR
120
n
120
THR
120
B
HIS
121
n
121
HIS
121
B
ARG
122
n
122
ARG
122
B
GLN
123
n
123
GLN
123
B
ALA
124
n
124
ALA
124
B
LEU
125
n
125
LEU
125
B
GLU
126
n
126
GLU
126
B
ASN
127
n
127
ASN
127
B
GLY
128
n
128
GLY
128
B
ASP
129
n
129
ASP
129
B
GLU
130
n
130
GLU
130
B
GLU
131
n
131
GLU
131
B
HIS
132
n
132
HIS
132
B
GLY
133
n
133
GLY
133
B
THR
134
n
134
THR
134
B
SER
135
n
135
SER
135
B
VAL
136
n
136
VAL
136
B
HIS
137
n
137
HIS
137
B
PHE
138
n
138
PHE
138
B
VAL
139
n
139
VAL
139
B
THR
140
n
140
THR
140
B
ASP
141
n
141
ASP
141
B
GLU
142
n
142
GLU
142
B
LEU
143
n
143
LEU
143
B
ASP
144
n
144
ASP
144
B
GLY
145
n
145
GLY
145
B
GLY
146
n
146
GLY
146
B
PRO
147
n
147
PRO
147
B
VAL
148
n
148
VAL
148
B
ILE
149
n
149
ILE
149
B
LEU
150
n
150
LEU
150
B
GLN
151
n
151
GLN
151
B
ALA
152
n
152
ALA
152
B
LYS
153
n
153
LYS
153
B
VAL
154
n
154
VAL
154
B
PRO
155
n
155
PRO
155
B
VAL
156
n
156
VAL
156
B
PHE
157
n
157
PHE
157
B
ALA
158
n
158
ALA
158
B
GLY
159
n
159
GLY
159
B
ASP
160
n
160
ASP
160
B
SER
161
n
161
SER
161
B
GLU
162
n
162
GLU
162
B
ASP
163
n
163
ASP
163
B
ASP
164
n
164
ASP
164
B
ILE
165
n
165
ILE
165
B
THR
166
n
166
THR
166
B
ALA
167
n
167
ALA
167
B
ARG
168
n
168
ARG
168
B
VAL
169
n
169
VAL
169
B
GLN
170
n
170
GLN
170
B
THR
171
n
171
THR
171
B
GLN
172
n
172
GLN
172
B
GLU
173
n
173
GLU
173
B
HIS
174
n
174
HIS
174
B
ALA
175
n
175
ALA
175
B
ILE
176
n
176
ILE
176
B
TYR
177
n
177
TYR
177
B
PRO
178
n
178
PRO
178
B
LEU
179
n
179
LEU
179
B
VAL
180
n
180
VAL
180
B
ILE
181
n
181
ILE
181
B
SER
182
n
182
SER
182
B
TRP
183
n
183
TRP
183
B
PHE
184
n
184
PHE
184
B
ALA
185
n
185
ALA
185
B
ASP
186
n
186
ASP
186
B
GLY
187
n
187
GLY
187
B
ARG
188
n
188
ARG
188
B
LEU
189
n
189
LEU
189
B
LYS
190
n
190
LYS
190
B
MET
191
n
191
MET
191
B
HIS
192
n
192
HIS
192
B
GLU
193
n
193
GLU
193
B
ASN
194
n
194
ASN
194
B
ALA
195
n
195
ALA
195
B
ALA
196
n
196
ALA
196
B
TRP
197
n
197
TRP
197
B
LEU
198
n
198
LEU
198
B
ASP
199
n
199
ASP
199
B
GLY
200
n
200
GLY
200
B
GLN
201
n
201
GLN
201
B
ARG
202
n
202
ARG
202
B
LEU
203
n
203
LEU
203
B
PRO
204
n
204
PRO
204
B
PRO
205
n
205
PRO
205
B
GLN
206
n
206
GLN
206
B
GLY
207
n
207
GLY
207
B
TYR
208
n
208
TYR
208
B
ALA
209
n
209
ALA
209
B
n
210
210
B
n
211
211
B
n
212
212
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ALA
52
A
N
ALA
52
A
O
ARG
31
A
O
ARG
31
A
O
THR
29
A
O
THR
29
A
N
ILE
3
A
N
ILE
3
A
N
VAL
4
A
N
VAL
4
A
O
VAL
82
A
O
VAL
82
A
N
LEU
85
A
N
LEU
85
A
O
LEU
105
A
O
LEU
105
A
O
HIS
108
A
O
HIS
108
A
N
SER
135
A
N
SER
135
A
O
VAL
136
A
O
VAL
136
A
N
ILE
149
A
N
ILE
149
A
N
HIS
192
A
N
HIS
192
A
O
ALA
195
A
O
ALA
195
A
N
LEU
198
A
N
LEU
198
A
O
GLN
201
A
O
GLN
201
B
N
ALA
52
B
N
ALA
52
B
O
ARG
31
B
O
ARG
31
B
O
THR
29
B
O
THR
29
B
N
ILE
3
B
N
ILE
3
B
N
VAL
4
B
N
VAL
4
B
O
VAL
82
B
O
VAL
82
B
O
VAL
83
B
O
VAL
83
B
N
LEU
105
B
N
LEU
105
B
O
HIS
108
B
O
HIS
108
B
N
SER
135
B
N
SER
135
B
O
VAL
136
B
O
VAL
136
B
N
ILE
149
B
N
ILE
149
B
N
HIS
192
B
N
HIS
192
B
O
ALA
195
B
O
ALA
195
B
N
LEU
198
B
N
LEU
198
B
O
GLN
201
B
O
GLN
201
1
A
ALA
210
A
ALA
210
1
Y
1
A
ASP
211
A
ASP
211
1
Y
1
A
GLU
212
A
GLU
212
1
Y
1
B
ALA
210
B
ALA
210
1
Y
1
B
ASP
211
B
ASP
211
1
Y
1
B
GLU
212
B
GLU
212
1
Y
1
A
SER
8
-142.09
-21.50
1
A
ALA
40
-35.91
118.53
1
A
ALA
79
38.52
61.48
1
A
MET
89
-85.57
35.06
1
A
PRO
109
-69.58
38.59
1
A
THR
120
-46.76
-71.52
1
A
ASN
127
-58.28
11.15
1
A
LEU
143
-34.32
110.85
1
A
ASP
144
50.88
19.45
1
A
TYR
208
-38.70
125.78
1
B
SER
8
-143.29
-19.98
1
B
ALA
40
-29.71
119.85
1
B
PRO
109
-68.02
38.62
1
B
LEU
143
-44.54
105.27
1
B
TYR
208
-38.02
125.74
PROTEIN_REP.PA
PROTEIN.TOP
WATER_REP.PARA
GARA.TOP
GARA.PAR
NEH9SH.TOP
NEH9SH.PAR
31.7
-7.65
0.00
4.29
11.01
0.00
-3.36
0.265
0.009
0.227
0.227
2.10
20.00
917
23742
18882
4.9
78.9
RANDOM
471792.21
0.00
1
RESTRAINED
THROUGHOUT
2.0
Engh & Huber
0.31
0.27
5.00
0.30
0.25
2.10
20.00
197
3537
106
0
3234
0.011
1.5
23.4
1.02
1.33
1.50
2.13
2.00
1.83
2.00
2.64
2.50
0.304
0.029
0.281
2.23
111
2077
6
5.1
54.7
18.5
2.1
20.0
1C2T
23742
23742
0.0
-3.0
0.083
1
13.0
2.9
99.2
0.421
2.10
2.17
2338
2.8
99.3
phasing
AMoRE
refinement
CNS
0.3
data collection
MAR345
data reduction
DENZO
data scaling
SCALEPACK
NEW INSIGHTS INTO INHIBITOR DESIGN FROM THE CRYSTAL STRUCTURE AND NMR STUDIES OF E. COLI GAR TRANSFORMYLASE IN COMPLEX WITH BETA-GAR AND 10-FORMYL-5,8,10-TRIDEAZAFOLIC ACID.
1
N
N
1
N
N
2
N
N
3
N
N
2
N
N
3
N
N
4
N
N
4
N
N
A
GLY
11
A
GLY
11
HELX_P
A
THR
23
A
THR
23
1
1
13
A
ALA
40
A
ALA
40
HELX_P
A
ALA
49
A
ALA
49
1
2
10
A
ILE
57
A
ILE
57
HELX_P
A
PHE
61
A
PHE
61
5
3
5
A
SER
63
A
SER
63
HELX_P
A
ASP
76
A
ASP
76
1
4
14
A
MET
77
A
MET
77
HELX_P
A
ALA
79
A
ALA
79
5
5
3
A
SER
93
A
SER
93
HELX_P
A
TYR
100
A
TYR
100
1
6
8
A
HIS
119
A
HIS
119
HELX_P
A
ASN
127
A
ASN
127
1
7
9
A
SER
161
A
SER
161
HELX_P
A
ASP
186
A
ASP
186
1
8
26
B
GLY
11
B
GLY
11
HELX_P
B
THR
23
B
THR
23
1
9
13
B
ALA
40
B
ALA
40
HELX_P
B
ALA
49
B
ALA
49
1
10
10
B
ILE
57
B
ILE
57
HELX_P
B
PHE
61
B
PHE
61
5
11
5
B
SER
63
B
SER
63
HELX_P
B
ASP
76
B
ASP
76
1
12
14
B
MET
77
B
MET
77
HELX_P
B
ALA
79
B
ALA
79
5
13
3
B
SER
93
B
SER
93
HELX_P
B
TYR
100
B
TYR
100
1
14
8
B
HIS
119
B
HIS
119
HELX_P
B
GLY
128
B
GLY
128
1
15
10
B
SER
161
B
SER
161
HELX_P
B
ASP
186
B
ASP
186
1
16
26
TRANSFERASE
PURINE BIOSYNTHESIS, ANTI-CANCER AGENT, INHIBITOR COMPLEX, TRANSFERASE
A
LEU
112
A
LEU
112
1
A
PRO
113
A
PRO
113
5.38
B
LEU
112
B
LEU
112
1
B
PRO
113
B
PRO
113
0.26
PUR3_ECOLI
UNP
1
P08179
1
212
1C2T
1
212
P08179
A
1
1
212
1
212
1C2T
1
212
P08179
B
1
1
212
7
3
7
3
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
parallel
parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ALA
52
A
ALA
52
A
THR
55
A
THR
55
A
THR
29
A
THR
29
A
SER
35
A
SER
35
A
ASN
2
A
ASN
2
A
ILE
7
A
ILE
7
A
VAL
82
A
VAL
82
A
LEU
85
A
LEU
85
A
LEU
104
A
LEU
104
A
HIS
108
A
HIS
108
A
GLU
131
A
GLU
131
A
PHE
138
A
PHE
138
A
VAL
148
A
VAL
148
A
PRO
155
A
PRO
155
A
LEU
189
A
LEU
189
A
HIS
192
A
HIS
192
A
ALA
195
A
ALA
195
A
LEU
198
A
LEU
198
A
GLN
201
A
GLN
201
A
ARG
202
A
ARG
202
B
ALA
52
B
ALA
52
B
THR
55
B
THR
55
B
THR
29
B
THR
29
B
SER
35
B
SER
35
B
ASN
2
B
ASN
2
B
ILE
7
B
ILE
7
B
VAL
82
B
VAL
82
B
LEU
85
B
LEU
85
B
LEU
104
B
LEU
104
B
HIS
108
B
HIS
108
B
GLU
131
B
GLU
131
B
PHE
138
B
PHE
138
B
VAL
148
B
VAL
148
B
PRO
155
B
PRO
155
B
LEU
189
B
LEU
189
B
HIS
192
B
HIS
192
B
ALA
195
B
ALA
195
B
LEU
198
B
LEU
198
B
GLN
201
B
GLN
201
B
ARG
202
B
ARG
202
BINDING SITE FOR RESIDUE NHS B 220
B
NHS
220
Software
17
BINDING SITE FOR RESIDUE GAR B 221
B
GAR
221
Software
15
BINDING SITE FOR RESIDUE NHS A 222
A
NHS
222
Software
18
BINDING SITE FOR RESIDUE GAR A 223
A
GAR
223
Software
12
A
GLU
131
A
GLU
131
17
1_655
B
ARG
64
B
ARG
64
17
1_555
B
PHE
88
B
PHE
88
17
1_555
B
MET
89
B
MET
89
17
1_555
B
ARG
90
B
ARG
90
17
1_555
B
ILE
91
B
ILE
91
17
1_555
B
LEU
92
B
LEU
92
17
1_555
B
VAL
97
B
VAL
97
17
1_555
B
ASN
106
B
ASN
106
17
1_555
B
HIS
108
B
HIS
108
17
1_555
B
LEU
118
B
LEU
118
17
1_555
B
VAL
139
B
VAL
139
17
1_555
B
THR
140
B
THR
140
17
1_555
B
ASP
141
B
ASP
141
17
1_555
B
GLU
142
B
GLU
142
17
1_555
B
ASP
144
B
ASP
144
17
1_555
B
GAR
221
F
GAR
17
1_555
B
ASN
10
B
ASN
10
15
1_555
B
GLY
11
B
GLY
11
15
1_555
B
SER
12
B
SER
12
15
1_555
B
ASN
13
B
ASN
13
15
1_555
B
GLY
87
B
GLY
87
15
1_555
B
PHE
88
B
PHE
88
15
1_555
B
MET
89
B
MET
89
15
1_555
B
ILE
107
B
ILE
107
15
1_555
B
PRO
109
B
PRO
109
15
1_555
B
GLU
173
B
GLU
173
15
1_555
B
NHS
220
E
NHS
15
1_555
B
HOH
244
H
HOH
15
1_555
B
HOH
246
H
HOH
15
1_555
B
HOH
287
H
HOH
15
1_555
B
HOH
289
H
HOH
15
1_555
A
ARG
64
A
ARG
64
18
1_555
A
PHE
88
A
PHE
88
18
1_555
A
MET
89
A
MET
89
18
1_555
A
ARG
90
A
ARG
90
18
1_555
A
ILE
91
A
ILE
91
18
1_555
A
LEU
92
A
LEU
92
18
1_555
A
VAL
97
A
VAL
97
18
1_555
A
ASN
106
A
ASN
106
18
1_555
A
HIS
108
A
HIS
108
18
1_555
A
LEU
118
A
LEU
118
18
1_555
A
VAL
139
A
VAL
139
18
1_555
A
THR
140
A
THR
140
18
1_555
A
ASP
141
A
ASP
141
18
1_555
A
GLU
142
A
GLU
142
18
1_555
A
LEU
143
A
LEU
143
18
1_555
A
ASP
144
A
ASP
144
18
1_555
A
GAR
223
D
GAR
18
1_555
B
LYS
153
B
LYS
153
18
1_556
A
GLY
11
A
GLY
11
12
1_555
A
SER
12
A
SER
12
12
1_555
A
ASN
13
A
ASN
13
12
1_555
A
GLY
87
A
GLY
87
12
1_555
A
PHE
88
A
PHE
88
12
1_555
A
MET
89
A
MET
89
12
1_555
A
ILE
107
A
ILE
107
12
1_555
A
PRO
109
A
PRO
109
12
1_555
A
GLU
173
A
GLU
173
12
1_555
A
NHS
222
C
NHS
12
1_555
A
HOH
227
G
HOH
12
1_555
A
HOH
234
G
HOH
12
1_555
4
P 1 21 1