1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Mcdonnell, J.M. Fushman, D. Cahill, S.M. Sutton, B.J. Cowburn, D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C3 H7 N O2 89.093 D-ALANINE D-peptide linking C4 H7 N O4 133.103 D-ASPARTIC ACID D-peptide linking C3 H7 N O2 S 121.158 D-CYSTEINE D-peptide linking C5 H9 N O4 147.129 D-GLUTAMIC ACID D-peptide linking C6 H13 N O2 131.173 D-ISOLEUCINE D-peptide linking C6 H13 N O2 131.173 D-LEUCINE D-peptide linking C6 H14 N2 O2 146.188 D-LYSINE D-peptide linking C9 H11 N O3 181.189 D-TYROSINE D-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking N 1 N N N 2 R C N 3 N C N 4 N O N 5 N C N 6 N S N 7 N O N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N H N 15 N N N 16 R C N 17 N C N 18 N C N 19 N O N 20 N O N 21 N H N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N N N 29 R C N 30 N C N 31 N O N 32 N C N 33 N C N 34 N O N 35 N O N 36 N O N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N N N 45 S C N 46 N C N 47 N O N 48 N C N 49 N S N 50 N O N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 R C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N C N 65 N O N 66 N O N 67 N O N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N H N 75 N H N 76 N H N 77 N N N 78 R C N 79 N C N 80 N O N 81 R C N 82 N C N 83 N C N 84 N C N 85 N O N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N N N 100 R C N 101 N C N 102 N C N 103 N C N 104 N C N 105 N C N 106 N O N 107 N O N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N N N 122 R C N 123 N C N 124 N O N 125 N C N 126 N C N 127 N C N 128 N C N 129 N N N 130 N O N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N N N 146 R C N 147 N C N 148 N O N 149 N C Y 150 N C Y 151 N C Y 152 N C Y 153 N C Y 154 N C Y 155 N C N 156 N O N 157 N O N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N N N 170 N C N 171 N C N 172 N O N 173 N O N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N doub N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N doub N 33 N sing N 34 N sing N 35 N sing N 36 N sing N 37 N doub N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N doub N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N doub N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N doub N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N doub N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N doub N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N doub N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing Y 148 N doub Y 149 N sing Y 150 N sing N 151 N sing Y 152 N doub N 153 N sing Y 154 N doub N 155 N sing Y 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N doub N 168 N sing N 169 N sing US J.Am.Chem.Soc. JACSAT 0004 0002-7863 119 5321 5328 10.1021/ja963884o -1 Solution Structures of FceRI Alpha-Chain Mimics: A Beta-Hairpin Peptide and Its Retroenantiomer 1997 10.2210/pdb1c4b/pdb pdb_00001c4b 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 DISULFIDE BETWEEN CYS1 AND CYS13 1568.814 PROTEIN (CYCLO(RD-262)) 1 syn polymer no yes C(DTY)(DLY)(DLE)(DAL)(DGL)G(DAS)(DLY)(DTY)(DTY)(DIL)(DCY) CYKLAEGDKYYIC A polypeptide(L) n n n n n n n n n n n n n database_2 pdbx_struct_assembly pdbx_struct_oper_list struct_conn chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Database references Derived calculations Data collection 1 0 1999-08-25 1 1 2008-04-26 1 2 2011-07-13 1 3 2022-02-16 1 4 2023-12-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id 1999-08-25 SPRSDE RCSB Y RCSB 1999-08-02 REL DERIVED FROM C-C' LOOP OF HUMAN FCERI-ALPHA sample LEAST RESTRAINT VIOLATION 1000 15 NOESY ROESY TOCSY DQF-COSY HMQC 0 5.5 1 atm 298.0 K distance geometry GUNTERT,WUTHRICH refinement DYANA structure solution DIANA 500 Bruker DMX500 CYS 1 n 1 CYS 1 A DTY 2 n 2 DTY 2 A DLY 3 n 3 DLY 3 A DLE 4 n 4 DLE 4 A DAL 5 n 5 DAL 5 A DGL 6 n 6 DGL 6 A GLY 7 n 7 GLY 7 A DAS 8 n 8 DAS 8 A DLY 9 n 9 DLY 9 A DTY 10 n 10 DTY 10 A DTY 11 n 11 DTY 11 A DIL 12 n 12 DIL 12 A DCY 13 n 13 DCY 13 A author_defined_assembly 1 monomeric A DTY 2 D-TYROSINE A DTY 2 TYR A DLY 3 D-LYSINE A DLY 3 LYS A DLE 4 D-LEUCINE A DLE 4 LEU A DAL 5 D-ALANINE A DAL 5 ALA A DGL 6 D-GLUTAMIC ACID A DGL 6 GLU A DAS 8 D-ASPARTIC ACID A DAS 8 ASP A DLY 9 D-LYSINE A DLY 9 LYS A DTY 10 D-TYROSINE A DTY 10 TYR A DTY 11 D-TYROSINE A DTY 11 TYR A DIL 12 D-ISOLEUCINE A DIL 12 ILE A DCY 13 D-CYSTEINE A DCY 13 CYS 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N DLY 3 A N DLY 3 A O DTY 10 A O DTY 10 10 A A HG SG CYS DCY 1 13 1.28 12 A A SG HG CYS DCY 1 13 1.51 1 A DAL 5 -158.41 -178.35 1 A DGL 6 38.52 75.35 1 A DLY 9 -168.69 -91.60 1 A DTY 10 -179.81 -134.76 1 A DIL 12 161.48 -106.44 2 A DAL 5 -171.67 176.45 2 A DGL 6 41.47 75.37 2 A DLY 9 -172.87 -89.12 2 A DTY 10 178.78 -133.54 3 A DTY 2 178.17 -110.99 3 A DAL 5 -161.17 176.31 3 A DGL 6 41.06 75.40 3 A DLY 9 -170.38 -87.84 3 A DTY 10 174.71 -132.88 3 A DIL 12 -163.14 -161.02 4 A DTY 2 179.93 -134.20 4 A DAL 5 -165.98 173.95 4 A DGL 6 38.58 75.81 4 A DLY 9 -171.10 -89.43 4 A DTY 10 178.07 -134.38 4 A DIL 12 -88.64 -165.58 5 A DTY 2 -171.45 -133.06 5 A DAL 5 -171.62 171.44 5 A DGL 6 40.55 76.18 5 A DLY 9 -173.05 -89.31 5 A DTY 10 179.04 -130.98 5 A DIL 12 -165.76 -141.97 6 A DTY 2 -172.75 -27.74 6 A DAL 5 -169.88 169.64 6 A DGL 6 40.13 75.96 6 A DLY 9 -171.22 -88.89 6 A DTY 10 176.42 -132.72 6 A DIL 12 -67.26 -135.66 7 A DAL 5 -165.46 173.12 7 A DGL 6 40.42 76.15 7 A DLY 9 -171.94 -88.74 7 A DTY 10 178.58 -132.90 8 A DTY 2 -178.43 -141.66 8 A DAL 5 -161.21 169.96 8 A DLY 9 -179.41 -81.51 8 A DTY 10 -178.33 -132.96 9 A DTY 2 176.90 -131.84 9 A DAL 5 -162.88 175.76 9 A DLY 9 -176.55 -84.56 9 A DTY 10 -173.45 -131.91 10 A DAL 5 -171.50 175.97 10 A DGL 6 38.51 75.38 10 A DLY 9 -172.02 -91.80 10 A DTY 10 175.87 -133.70 10 A DIL 12 -179.08 95.79 11 A DTY 2 175.72 -146.30 11 A DLY 3 -175.95 -144.96 11 A DAL 5 -174.83 178.98 11 A DGL 6 40.34 75.87 11 A DLY 9 -170.76 -89.06 11 A DTY 10 170.22 -131.98 12 A DAL 5 -155.12 -178.46 12 A DLY 9 -172.49 -88.50 12 A DTY 10 170.65 -133.51 12 A DIL 12 -175.10 -145.56 13 A DTY 2 178.67 -128.73 13 A DAL 5 -158.01 -179.16 13 A DGL 6 39.20 73.22 13 A DLY 9 -167.60 -94.64 13 A DTY 10 -178.62 -133.40 13 A DIL 12 -161.81 91.26 14 A DAL 5 -162.37 178.07 14 A DLY 9 -173.20 -87.71 14 A DTY 10 179.98 -109.81 14 A DIL 12 177.85 178.95 15 A DAL 5 -171.93 173.58 15 A DGL 6 38.69 75.42 15 A DLY 9 -172.91 -93.14 15 A DTY 10 177.26 -134.37 15 A DIL 12 143.56 130.97 A BETA-HAIRPIN MIMIC FROM FCERI-ALPHA-CYCLO(RD-262) 1 N N disulf 2.125 A CYS 1 A SG CYS 1 1_555 A DCY 13 A SG DCY 13 1_555 covale 1.326 both A CYS 1 A C CYS 1 1_555 A DTY 2 A N DTY 2 1_555 covale 1.324 both A DTY 2 A C DTY 2 1_555 A DLY 3 A N DLY 3 1_555 covale 1.326 both A DLY 3 A C DLY 3 1_555 A DLE 4 A N DLE 4 1_555 covale 1.325 both A DLE 4 A C DLE 4 1_555 A DAL 5 A N DAL 5 1_555 covale 1.326 both A DAL 5 A C DAL 5 1_555 A DGL 6 A N DGL 6 1_555 covale 1.326 both A DGL 6 A C DGL 6 1_555 A GLY 7 A N GLY 7 1_555 covale 1.325 both A GLY 7 A C GLY 7 1_555 A DAS 8 A N DAS 8 1_555 covale 1.325 both A DAS 8 A C DAS 8 1_555 A DLY 9 A N DLY 9 1_555 covale 1.325 both A DLY 9 A C DLY 9 1_555 A DTY 10 A N DTY 10 1_555 covale 1.324 both A DTY 10 A C DTY 10 1_555 A DTY 11 A N DTY 11 1_555 covale 1.325 both A DTY 11 A C DTY 11 1_555 A DIL 12 A N DIL 12 1_555 covale 1.325 both A DIL 12 A C DIL 12 1_555 A DCY 13 A N DCY 13 1_555 BETA-HAIRPIN BETA-HAIRPIN, PEPTIDE MIMIC, D-AMINO ACIDS, ALLERGY, FCERI, IGE 1C4B PDB 1 1C4B 1 13 1C4B 1 13 1C4B A 1 1 13 2 anti-parallel A DTY 2 A DTY 2 A DAL 5 A DAL 5 A DAS 8 A DAS 8 A DTY 11 A DTY 11 1 P 1