0.022589
0.003525
0.008492
0.000000
0.022916
0.008348
0.000000
0.000000
0.020573
0.00000
0.00000
0.00000
Ling, H.
Brunton, J.L.
Read, R.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
5
106.24
106.69
98.87
44.269
44.165
54.007
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C6 H12 O6
180.156
beta-D-glucopyranose
beta-D-glucose; D-glucose; glucose
D-saccharide, beta linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C6 H12 O6
180.156
beta-D-galactopyranose
beta-D-galactose; D-galactose; galactose
D-saccharide, beta linking
C6 H12 O6
180.156
alpha-D-galactopyranose
alpha-D-galactose; D-galactose; galactose; ALPHA D-GALACTOSE
D-saccharide, alpha linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
R
C
N
75
S
C
N
76
S
C
N
77
R
C
N
78
N
C
N
79
R
C
N
80
N
O
N
81
N
O
N
82
N
O
N
83
N
O
N
84
N
O
N
85
N
O
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
N
N
99
R
C
N
100
N
C
N
101
N
O
N
102
N
C
N
103
N
S
N
104
N
O
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
R
C
N
113
R
C
N
114
S
C
N
115
R
C
N
116
R
C
N
117
N
C
N
118
N
O
N
119
N
O
N
120
N
O
N
121
N
O
N
122
N
O
N
123
N
O
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
S
C
N
137
R
C
N
138
S
C
N
139
R
C
N
140
R
C
N
141
N
C
N
142
N
O
N
143
N
O
N
144
N
O
N
145
N
O
N
146
N
O
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
N
N
161
S
C
N
162
N
C
N
163
N
O
N
164
N
C
N
165
N
C
N
166
N
C
N
167
N
O
N
168
N
N
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
N
N
181
S
C
N
182
N
C
N
183
N
O
N
184
N
C
N
185
N
C
N
186
N
C
N
187
N
O
N
188
N
O
N
189
N
O
N
190
N
H
N
191
N
H
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
N
N
200
N
C
N
201
N
C
N
202
N
O
N
203
N
O
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
N
N
210
S
C
N
211
N
C
N
212
N
O
N
213
N
C
Y
214
N
C
Y
215
N
N
Y
216
N
C
Y
217
N
C
Y
218
N
N
N
219
N
O
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
O
N
231
N
H
N
232
N
H
N
233
N
N
N
234
S
C
N
235
N
C
N
236
N
O
N
237
S
C
N
238
N
C
N
239
N
C
N
240
N
C
N
241
N
O
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
H
N
251
N
H
N
252
N
H
N
253
N
H
N
254
N
H
N
255
N
N
N
256
S
C
N
257
N
C
N
258
N
O
N
259
N
C
N
260
N
C
N
261
N
C
N
262
N
C
N
263
N
O
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
H
N
274
N
H
N
275
N
H
N
276
N
H
N
277
N
N
N
278
S
C
N
279
N
C
N
280
N
O
N
281
N
C
N
282
N
C
N
283
N
C
N
284
N
C
N
285
N
N
N
286
N
O
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
H
N
291
N
H
N
292
N
H
N
293
N
H
N
294
N
H
N
295
N
H
N
296
N
H
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
N
N
303
S
C
N
304
N
C
N
305
N
O
N
306
N
C
N
307
N
C
N
308
N
S
N
309
N
C
N
310
N
O
N
311
N
H
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
N
N
323
S
C
N
324
N
C
N
325
N
O
N
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
Y
332
N
C
N
333
N
O
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
N
350
N
C
N
351
N
C
N
352
N
O
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
N
N
363
S
C
N
364
N
C
N
365
N
O
N
366
N
C
N
367
N
O
N
368
N
O
N
369
N
H
N
370
N
H
N
371
N
H
N
372
N
H
N
373
N
H
N
374
N
H
N
375
N
H
N
376
N
N
N
377
S
C
N
378
N
C
N
379
N
O
N
380
R
C
N
381
N
O
N
382
N
C
N
383
N
O
N
384
N
H
N
385
N
H
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
N
N
394
S
C
N
395
N
C
N
396
N
O
N
397
N
C
Y
398
N
C
Y
399
N
C
Y
400
N
C
Y
401
N
N
Y
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
N
407
N
O
N
408
N
H
N
409
N
H
N
410
N
H
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
N
N
421
S
C
N
422
N
C
N
423
N
O
N
424
N
C
Y
425
N
C
Y
426
N
C
Y
427
N
C
Y
428
N
C
Y
429
N
C
Y
430
N
C
N
431
N
O
N
432
N
O
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
441
N
H
N
442
N
H
N
443
N
H
N
444
N
N
N
445
S
C
N
446
N
C
N
447
N
O
N
448
N
C
N
449
N
C
N
450
N
C
N
451
N
O
N
452
N
H
N
453
N
H
N
454
N
H
N
455
N
H
N
456
N
H
N
457
N
H
N
458
N
H
N
459
N
H
N
460
N
H
N
461
N
H
N
462
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
doub
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
doub
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
doub
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
doub
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
doub
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
doub
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
Y
212
N
sing
Y
213
N
doub
Y
214
N
doub
N
215
N
sing
Y
216
N
sing
N
217
N
sing
Y
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
sing
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
doub
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
sing
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
N
248
N
sing
N
249
N
sing
N
250
N
sing
N
251
N
doub
N
252
N
sing
N
253
N
sing
N
254
N
sing
N
255
N
sing
N
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
sing
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
doub
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
doub
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
Y
320
N
doub
Y
321
N
sing
Y
322
N
sing
N
323
N
sing
Y
324
N
doub
N
325
N
sing
Y
326
N
doub
N
327
N
sing
Y
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
doub
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
doub
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
sing
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
N
367
N
sing
N
368
N
doub
N
369
N
sing
N
370
N
sing
N
371
N
sing
N
372
N
sing
N
373
N
sing
N
374
N
sing
N
375
N
sing
N
376
N
sing
N
377
N
sing
N
378
N
sing
N
379
N
sing
N
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
doub
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
Y
389
N
doub
Y
390
N
sing
Y
391
N
sing
N
392
N
sing
Y
393
N
doub
Y
394
N
sing
Y
395
N
sing
N
396
N
sing
Y
397
N
sing
Y
398
N
doub
N
399
N
sing
Y
400
N
doub
N
401
N
sing
Y
402
N
sing
N
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
doub
N
413
N
sing
N
414
N
sing
N
415
N
sing
N
416
N
sing
Y
417
N
doub
Y
418
N
sing
Y
419
N
sing
N
420
N
sing
Y
421
N
doub
N
422
N
sing
Y
423
N
doub
N
424
N
sing
Y
425
N
sing
N
426
N
sing
N
427
N
sing
N
428
N
sing
N
429
N
sing
N
430
N
sing
N
431
N
sing
N
432
N
sing
N
433
N
sing
N
434
N
sing
N
435
N
sing
N
436
N
doub
N
437
N
sing
N
438
N
sing
N
439
N
sing
N
440
N
sing
N
441
N
sing
N
442
N
sing
N
443
N
sing
N
444
N
sing
N
445
N
sing
N
446
N
sing
N
447
N
sing
To be Published
0353
Identification of the Primary Receptor Binding Site of Shiga-Like Toxin B Subunits: Structures of Mutated Shiga-Like Toxin I B-Pentamer with and without Bound Carbohydrate
US
Biochemistry
BICHAW
0033
0006-2960
37
1777
10.1021/bi971806n
Structure of the Shiga-Like Toxin I B-Pentamer Complexed with an Analogue of its Receptor Gb3
1998
10.2210/pdb1c4q/pdb
pdb_00001c4q
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
AREA DETECTOR
1998-05-01
SIEMENS
GRAPHITE CRYSTAL
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
SIEMENS
7507.405
PROTEIN (SHIGA-LIKE TOXIN I SUBUNIT B)
RECEPTOR-BINDING DOMAIN
F30A, W34A
5
man
polymer
504.438
alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
5
man
branched
18.015
water
389
nat
water
no
no
TPDCVTGKVEYTKYNDDDTFTVKVGDKELATNRANLQSLLLSAQITGMTVTIKTNACHNGGGFSEVIFR
TPDCVTGKVEYTKYNDDDTFTVKVGDKELATNRANLQSLLLSAQITGMTVTIKTNACHNGGGFSEVIFR
A,B,C,D,E
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
sample
562
Escherichia coli
562
Escherichia coli
PLASMID
1
2.50
50.82
7.5
pH 7.5
software
diffrn_source
struct_ref_seq_dif
atom_site
chem_comp
entity
pdbx_branch_scheme
pdbx_chem_comp_identifier
pdbx_entity_branch
pdbx_entity_branch_descriptor
pdbx_entity_branch_link
pdbx_entity_branch_list
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_assembly_gen
struct_asym
struct_conn
struct_ref_seq_dif
struct_site
struct_site_gen
chem_comp
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
repository
Initial release
Carbohydrate remediation
repository
Remediation
Version format compliance
Version format compliance
Refinement description
Data collection
Database references
Atomic model
Data collection
Database references
Derived calculations
Structure summary
Data collection
Database references
Refinement description
Structure summary
1
0
2000-09-20
1
1
2008-04-26
1
2
2011-07-13
1
3
2017-10-04
1
4
2018-03-07
1
5
2018-03-14
2
0
2020-07-29
2
1
2023-08-09
_diffrn_source.source
_struct_ref_seq_dif.details
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_asym_id
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.label_asym_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_entity_id
_atom_site.type_symbol
_chem_comp.name
_chem_comp.type
_pdbx_struct_assembly_gen.asym_id_list
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_ref_seq_dif.details
_chem_comp.pdbx_synonyms
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
A
BGC
192
n
F
BGC
1
A
GAL
191
n
F
GAL
2
A
GLA
190
n
F
GLA
3
B
BGC
292
n
G
BGC
1
B
GAL
291
n
G
GAL
2
B
GLA
290
n
G
GLA
3
C
BGC
392
n
H
BGC
1
C
GAL
391
n
H
GAL
2
C
GLA
390
n
H
GLA
3
D
BGC
492
n
I
BGC
1
D
GAL
491
n
I
GAL
2
D
GLA
490
n
I
GLA
3
E
BGC
592
n
J
BGC
1
E
GAL
591
n
J
GAL
2
E
GLA
590
n
J
GLA
3
DGlcpb
b-D-glucopyranose
b-D-Glcp
Glc
DGalpb
b-D-galactopyranose
b-D-Galp
Gal
DGalpa
a-D-galactopyranose
a-D-Galp
Gal
RCSB
Y
RCSB
1999-08-31
REL
REL
oligosaccharide
DGalpa1-4DGalpb1-4DGlcpb1-ROH
2
GMML
1.0
Glycam Condensed Sequence
WURCS=2.0/3,3,2/[a2122h-1b_1-5][a2112h-1b_1-5][a2112h-1a_1-5]/1-2-3/a4-b1_b4-c1
2
PDB2Glycan
1.1.0
WURCS
[][b-D-Glcp]{[(4+1)][b-D-Galp]{[(4+1)][a-D-Galp]{}}}
2
PDB-CARE
LINUCS
C1
O4
GAL
BGC
2
1
2
O1
HO4
sing
C1
O4
GLA
GAL
3
2
2
O1
HO4
sing
n
n
n
HOH
water
1BOS
PDB
experimental model
HOH
604
3
HOH
HOH
604
A
HOH
673
3
HOH
HOH
673
A
HOH
674
3
HOH
HOH
674
A
HOH
684
3
HOH
HOH
684
A
HOH
687
3
HOH
HOH
687
A
HOH
688
3
HOH
HOH
688
A
HOH
690
3
HOH
HOH
690
A
HOH
691
3
HOH
HOH
691
A
HOH
692
3
HOH
HOH
692
A
HOH
695
3
HOH
HOH
695
A
HOH
698
3
HOH
HOH
698
A
HOH
699
3
HOH
HOH
699
A
HOH
703
3
HOH
HOH
703
A
HOH
704
3
HOH
HOH
704
A
HOH
707
3
HOH
HOH
707
A
HOH
711
3
HOH
HOH
711
A
HOH
716
3
HOH
HOH
716
A
HOH
720
3
HOH
HOH
720
A
HOH
721
3
HOH
HOH
721
A
HOH
722
3
HOH
HOH
722
A
HOH
724
3
HOH
HOH
724
A
HOH
725
3
HOH
HOH
725
A
HOH
727
3
HOH
HOH
727
A
HOH
729
3
HOH
HOH
729
A
HOH
730
3
HOH
HOH
730
A
HOH
735
3
HOH
HOH
735
A
HOH
737
3
HOH
HOH
737
A
HOH
740
3
HOH
HOH
740
A
HOH
741
3
HOH
HOH
741
A
HOH
752
3
HOH
HOH
752
A
HOH
755
3
HOH
HOH
755
A
HOH
757
3
HOH
HOH
757
A
HOH
758
3
HOH
HOH
758
A
HOH
769
3
HOH
HOH
769
A
HOH
772
3
HOH
HOH
772
A
HOH
774
3
HOH
HOH
774
A
HOH
778
3
HOH
HOH
778
A
HOH
783
3
HOH
HOH
783
A
HOH
798
3
HOH
HOH
798
A
HOH
836
3
HOH
HOH
836
A
HOH
844
3
HOH
HOH
844
A
HOH
849
3
HOH
HOH
849
A
HOH
853
3
HOH
HOH
853
A
HOH
855
3
HOH
HOH
855
A
HOH
856
3
HOH
HOH
856
A
HOH
858
3
HOH
HOH
858
A
HOH
860
3
HOH
HOH
860
A
HOH
862
3
HOH
HOH
862
A
HOH
864
3
HOH
HOH
864
A
HOH
871
3
HOH
HOH
871
A
HOH
873
3
HOH
HOH
873
A
HOH
874
3
HOH
HOH
874
A
HOH
875
3
HOH
HOH
875
A
HOH
876
3
HOH
HOH
876
A
HOH
877
3
HOH
HOH
877
A
HOH
878
3
HOH
HOH
878
A
HOH
879
3
HOH
HOH
879
A
HOH
889
3
HOH
HOH
889
A
HOH
902
3
HOH
HOH
902
A
HOH
910
3
HOH
HOH
910
A
HOH
920
3
HOH
HOH
920
A
HOH
922
3
HOH
HOH
922
A
HOH
923
3
HOH
HOH
923
A
HOH
928
3
HOH
HOH
928
A
HOH
936
3
HOH
HOH
936
A
HOH
938
3
HOH
HOH
938
A
HOH
939
3
HOH
HOH
939
A
HOH
945
3
HOH
HOH
945
A
HOH
947
3
HOH
HOH
947
A
HOH
951
3
HOH
HOH
951
A
HOH
961
3
HOH
HOH
961
A
HOH
968
3
HOH
HOH
968
A
HOH
969
3
HOH
HOH
969
A
HOH
975
3
HOH
HOH
975
A
HOH
976
3
HOH
HOH
976
A
HOH
978
3
HOH
HOH
978
A
HOH
985
3
HOH
HOH
985
A
HOH
605
3
HOH
HOH
605
B
HOH
607
3
HOH
HOH
607
B
HOH
608
3
HOH
HOH
608
B
HOH
609
3
HOH
HOH
609
B
HOH
613
3
HOH
HOH
613
B
HOH
614
3
HOH
HOH
614
B
HOH
615
3
HOH
HOH
615
B
HOH
616
3
HOH
HOH
616
B
HOH
618
3
HOH
HOH
618
B
HOH
621
3
HOH
HOH
621
B
HOH
622
3
HOH
HOH
622
B
HOH
628
3
HOH
HOH
628
B
HOH
629
3
HOH
HOH
629
B
HOH
630
3
HOH
HOH
630
B
HOH
633
3
HOH
HOH
633
B
HOH
641
3
HOH
HOH
641
B
HOH
642
3
HOH
HOH
642
B
HOH
645
3
HOH
HOH
645
B
HOH
649
3
HOH
HOH
649
B
HOH
650
3
HOH
HOH
650
B
HOH
654
3
HOH
HOH
654
B
HOH
658
3
HOH
HOH
658
B
HOH
667
3
HOH
HOH
667
B
HOH
669
3
HOH
HOH
669
B
HOH
675
3
HOH
HOH
675
B
HOH
676
3
HOH
HOH
676
B
HOH
719
3
HOH
HOH
719
B
HOH
732
3
HOH
HOH
732
B
HOH
742
3
HOH
HOH
742
B
HOH
744
3
HOH
HOH
744
B
HOH
747
3
HOH
HOH
747
B
HOH
754
3
HOH
HOH
754
B
HOH
756
3
HOH
HOH
756
B
HOH
761
3
HOH
HOH
761
B
HOH
763
3
HOH
HOH
763
B
HOH
764
3
HOH
HOH
764
B
HOH
765
3
HOH
HOH
765
B
HOH
766
3
HOH
HOH
766
B
HOH
771
3
HOH
HOH
771
B
HOH
776
3
HOH
HOH
776
B
HOH
777
3
HOH
HOH
777
B
HOH
780
3
HOH
HOH
780
B
HOH
781
3
HOH
HOH
781
B
HOH
785
3
HOH
HOH
785
B
HOH
786
3
HOH
HOH
786
B
HOH
787
3
HOH
HOH
787
B
HOH
792
3
HOH
HOH
792
B
HOH
793
3
HOH
HOH
793
B
HOH
802
3
HOH
HOH
802
B
HOH
803
3
HOH
HOH
803
B
HOH
810
3
HOH
HOH
810
B
HOH
811
3
HOH
HOH
811
B
HOH
815
3
HOH
HOH
815
B
HOH
816
3
HOH
HOH
816
B
HOH
817
3
HOH
HOH
817
B
HOH
819
3
HOH
HOH
819
B
HOH
829
3
HOH
HOH
829
B
HOH
835
3
HOH
HOH
835
B
HOH
846
3
HOH
HOH
846
B
HOH
881
3
HOH
HOH
881
B
HOH
882
3
HOH
HOH
882
B
HOH
883
3
HOH
HOH
883
B
HOH
893
3
HOH
HOH
893
B
HOH
894
3
HOH
HOH
894
B
HOH
904
3
HOH
HOH
904
B
HOH
906
3
HOH
HOH
906
B
HOH
908
3
HOH
HOH
908
B
HOH
909
3
HOH
HOH
909
B
HOH
911
3
HOH
HOH
911
B
HOH
912
3
HOH
HOH
912
B
HOH
917
3
HOH
HOH
917
B
HOH
921
3
HOH
HOH
921
B
HOH
929
3
HOH
HOH
929
B
HOH
930
3
HOH
HOH
930
B
HOH
932
3
HOH
HOH
932
B
HOH
935
3
HOH
HOH
935
B
HOH
946
3
HOH
HOH
946
B
HOH
955
3
HOH
HOH
955
B
HOH
957
3
HOH
HOH
957
B
HOH
958
3
HOH
HOH
958
B
HOH
959
3
HOH
HOH
959
B
HOH
965
3
HOH
HOH
965
B
HOH
988
3
HOH
HOH
988
B
HOH
601
3
HOH
HOH
601
C
HOH
602
3
HOH
HOH
602
C
HOH
610
3
HOH
HOH
610
C
HOH
611
3
HOH
HOH
611
C
HOH
617
3
HOH
HOH
617
C
HOH
619
3
HOH
HOH
619
C
HOH
623
3
HOH
HOH
623
C
HOH
624
3
HOH
HOH
624
C
HOH
627
3
HOH
HOH
627
C
HOH
632
3
HOH
HOH
632
C
HOH
637
3
HOH
HOH
637
C
HOH
638
3
HOH
HOH
638
C
HOH
639
3
HOH
HOH
639
C
HOH
643
3
HOH
HOH
643
C
HOH
646
3
HOH
HOH
646
C
HOH
647
3
HOH
HOH
647
C
HOH
648
3
HOH
HOH
648
C
HOH
652
3
HOH
HOH
652
C
HOH
653
3
HOH
HOH
653
C
HOH
655
3
HOH
HOH
655
C
HOH
657
3
HOH
HOH
657
C
HOH
659
3
HOH
HOH
659
C
HOH
661
3
HOH
HOH
661
C
HOH
664
3
HOH
HOH
664
C
HOH
678
3
HOH
HOH
678
C
HOH
743
3
HOH
HOH
743
C
HOH
748
3
HOH
HOH
748
C
HOH
750
3
HOH
HOH
750
C
HOH
760
3
HOH
HOH
760
C
HOH
762
3
HOH
HOH
762
C
HOH
770
3
HOH
HOH
770
C
HOH
775
3
HOH
HOH
775
C
HOH
784
3
HOH
HOH
784
C
HOH
788
3
HOH
HOH
788
C
HOH
795
3
HOH
HOH
795
C
HOH
796
3
HOH
HOH
796
C
HOH
797
3
HOH
HOH
797
C
HOH
800
3
HOH
HOH
800
C
HOH
801
3
HOH
HOH
801
C
HOH
804
3
HOH
HOH
804
C
HOH
808
3
HOH
HOH
808
C
HOH
813
3
HOH
HOH
813
C
HOH
814
3
HOH
HOH
814
C
HOH
818
3
HOH
HOH
818
C
HOH
825
3
HOH
HOH
825
C
HOH
826
3
HOH
HOH
826
C
HOH
828
3
HOH
HOH
828
C
HOH
832
3
HOH
HOH
832
C
HOH
840
3
HOH
HOH
840
C
HOH
841
3
HOH
HOH
841
C
HOH
866
3
HOH
HOH
866
C
HOH
880
3
HOH
HOH
880
C
HOH
884
3
HOH
HOH
884
C
HOH
895
3
HOH
HOH
895
C
HOH
897
3
HOH
HOH
897
C
HOH
898
3
HOH
HOH
898
C
HOH
901
3
HOH
HOH
901
C
HOH
913
3
HOH
HOH
913
C
HOH
916
3
HOH
HOH
916
C
HOH
925
3
HOH
HOH
925
C
HOH
940
3
HOH
HOH
940
C
HOH
941
3
HOH
HOH
941
C
HOH
944
3
HOH
HOH
944
C
HOH
949
3
HOH
HOH
949
C
HOH
950
3
HOH
HOH
950
C
HOH
962
3
HOH
HOH
962
C
HOH
964
3
HOH
HOH
964
C
HOH
967
3
HOH
HOH
967
C
HOH
977
3
HOH
HOH
977
C
HOH
980
3
HOH
HOH
980
C
HOH
984
3
HOH
HOH
984
C
HOH
986
3
HOH
HOH
986
C
HOH
987
3
HOH
HOH
987
C
HOH
603
3
HOH
HOH
603
D
HOH
606
3
HOH
HOH
606
D
HOH
612
3
HOH
HOH
612
D
HOH
620
3
HOH
HOH
620
D
HOH
634
3
HOH
HOH
634
D
HOH
666
3
HOH
HOH
666
D
HOH
677
3
HOH
HOH
677
D
HOH
682
3
HOH
HOH
682
D
HOH
685
3
HOH
HOH
685
D
HOH
686
3
HOH
HOH
686
D
HOH
689
3
HOH
HOH
689
D
HOH
694
3
HOH
HOH
694
D
HOH
696
3
HOH
HOH
696
D
HOH
697
3
HOH
HOH
697
D
HOH
700
3
HOH
HOH
700
D
HOH
701
3
HOH
HOH
701
D
HOH
702
3
HOH
HOH
702
D
HOH
708
3
HOH
HOH
708
D
HOH
713
3
HOH
HOH
713
D
HOH
715
3
HOH
HOH
715
D
HOH
723
3
HOH
HOH
723
D
HOH
726
3
HOH
HOH
726
D
HOH
728
3
HOH
HOH
728
D
HOH
733
3
HOH
HOH
733
D
HOH
734
3
HOH
HOH
734
D
HOH
736
3
HOH
HOH
736
D
HOH
738
3
HOH
HOH
738
D
HOH
739
3
HOH
HOH
739
D
HOH
745
3
HOH
HOH
745
D
HOH
746
3
HOH
HOH
746
D
HOH
749
3
HOH
HOH
749
D
HOH
751
3
HOH
HOH
751
D
HOH
753
3
HOH
HOH
753
D
HOH
768
3
HOH
HOH
768
D
HOH
782
3
HOH
HOH
782
D
HOH
789
3
HOH
HOH
789
D
HOH
790
3
HOH
HOH
790
D
HOH
791
3
HOH
HOH
791
D
HOH
794
3
HOH
HOH
794
D
HOH
799
3
HOH
HOH
799
D
HOH
805
3
HOH
HOH
805
D
HOH
806
3
HOH
HOH
806
D
HOH
830
3
HOH
HOH
830
D
HOH
831
3
HOH
HOH
831
D
HOH
834
3
HOH
HOH
834
D
HOH
842
3
HOH
HOH
842
D
HOH
843
3
HOH
HOH
843
D
HOH
848
3
HOH
HOH
848
D
HOH
850
3
HOH
HOH
850
D
HOH
851
3
HOH
HOH
851
D
HOH
852
3
HOH
HOH
852
D
HOH
854
3
HOH
HOH
854
D
HOH
857
3
HOH
HOH
857
D
HOH
865
3
HOH
HOH
865
D
HOH
868
3
HOH
HOH
868
D
HOH
869
3
HOH
HOH
869
D
HOH
870
3
HOH
HOH
870
D
HOH
872
3
HOH
HOH
872
D
HOH
885
3
HOH
HOH
885
D
HOH
886
3
HOH
HOH
886
D
HOH
887
3
HOH
HOH
887
D
HOH
888
3
HOH
HOH
888
D
HOH
890
3
HOH
HOH
890
D
HOH
900
3
HOH
HOH
900
D
HOH
905
3
HOH
HOH
905
D
HOH
915
3
HOH
HOH
915
D
HOH
924
3
HOH
HOH
924
D
HOH
927
3
HOH
HOH
927
D
HOH
933
3
HOH
HOH
933
D
HOH
934
3
HOH
HOH
934
D
HOH
937
3
HOH
HOH
937
D
HOH
942
3
HOH
HOH
942
D
HOH
943
3
HOH
HOH
943
D
HOH
952
3
HOH
HOH
952
D
HOH
953
3
HOH
HOH
953
D
HOH
954
3
HOH
HOH
954
D
HOH
970
3
HOH
HOH
970
D
HOH
971
3
HOH
HOH
971
D
HOH
974
3
HOH
HOH
974
D
HOH
982
3
HOH
HOH
982
D
HOH
983
3
HOH
HOH
983
D
HOH
625
3
HOH
HOH
625
E
HOH
626
3
HOH
HOH
626
E
HOH
631
3
HOH
HOH
631
E
HOH
635
3
HOH
HOH
635
E
HOH
636
3
HOH
HOH
636
E
HOH
640
3
HOH
HOH
640
E
HOH
644
3
HOH
HOH
644
E
HOH
651
3
HOH
HOH
651
E
HOH
656
3
HOH
HOH
656
E
HOH
660
3
HOH
HOH
660
E
HOH
662
3
HOH
HOH
662
E
HOH
663
3
HOH
HOH
663
E
HOH
665
3
HOH
HOH
665
E
HOH
668
3
HOH
HOH
668
E
HOH
670
3
HOH
HOH
670
E
HOH
671
3
HOH
HOH
671
E
HOH
672
3
HOH
HOH
672
E
HOH
679
3
HOH
HOH
679
E
HOH
680
3
HOH
HOH
680
E
HOH
681
3
HOH
HOH
681
E
HOH
683
3
HOH
HOH
683
E
HOH
693
3
HOH
HOH
693
E
HOH
705
3
HOH
HOH
705
E
HOH
706
3
HOH
HOH
706
E
HOH
709
3
HOH
HOH
709
E
HOH
710
3
HOH
HOH
710
E
HOH
712
3
HOH
HOH
712
E
HOH
714
3
HOH
HOH
714
E
HOH
717
3
HOH
HOH
717
E
HOH
718
3
HOH
HOH
718
E
HOH
731
3
HOH
HOH
731
E
HOH
759
3
HOH
HOH
759
E
HOH
767
3
HOH
HOH
767
E
HOH
773
3
HOH
HOH
773
E
HOH
779
3
HOH
HOH
779
E
HOH
807
3
HOH
HOH
807
E
HOH
809
3
HOH
HOH
809
E
HOH
812
3
HOH
HOH
812
E
HOH
820
3
HOH
HOH
820
E
HOH
821
3
HOH
HOH
821
E
HOH
822
3
HOH
HOH
822
E
HOH
823
3
HOH
HOH
823
E
HOH
824
3
HOH
HOH
824
E
HOH
827
3
HOH
HOH
827
E
HOH
833
3
HOH
HOH
833
E
HOH
837
3
HOH
HOH
837
E
HOH
838
3
HOH
HOH
838
E
HOH
839
3
HOH
HOH
839
E
HOH
845
3
HOH
HOH
845
E
HOH
847
3
HOH
HOH
847
E
HOH
859
3
HOH
HOH
859
E
HOH
861
3
HOH
HOH
861
E
HOH
863
3
HOH
HOH
863
E
HOH
867
3
HOH
HOH
867
E
HOH
891
3
HOH
HOH
891
E
HOH
892
3
HOH
HOH
892
E
HOH
896
3
HOH
HOH
896
E
HOH
899
3
HOH
HOH
899
E
HOH
903
3
HOH
HOH
903
E
HOH
907
3
HOH
HOH
907
E
HOH
914
3
HOH
HOH
914
E
HOH
918
3
HOH
HOH
918
E
HOH
919
3
HOH
HOH
919
E
HOH
926
3
HOH
HOH
926
E
HOH
931
3
HOH
HOH
931
E
HOH
948
3
HOH
HOH
948
E
HOH
956
3
HOH
HOH
956
E
HOH
960
3
HOH
HOH
960
E
HOH
963
3
HOH
HOH
963
E
HOH
966
3
HOH
HOH
966
E
HOH
972
3
HOH
HOH
972
E
HOH
973
3
HOH
HOH
973
E
HOH
979
3
HOH
HOH
979
E
HOH
981
3
HOH
HOH
981
E
HOH
989
3
HOH
HOH
989
E
THR
101
n
1
THR
101
A
PRO
102
n
2
PRO
102
A
ASP
103
n
3
ASP
103
A
CYS
104
n
4
CYS
104
A
VAL
105
n
5
VAL
105
A
THR
106
n
6
THR
106
A
GLY
107
n
7
GLY
107
A
LYS
108
n
8
LYS
108
A
VAL
109
n
9
VAL
109
A
GLU
110
n
10
GLU
110
A
TYR
111
n
11
TYR
111
A
THR
112
n
12
THR
112
A
LYS
113
n
13
LYS
113
A
TYR
114
n
14
TYR
114
A
ASN
115
n
15
ASN
115
A
ASP
116
n
16
ASP
116
A
ASP
117
n
17
ASP
117
A
ASP
118
n
18
ASP
118
A
THR
119
n
19
THR
119
A
PHE
120
n
20
PHE
120
A
THR
121
n
21
THR
121
A
VAL
122
n
22
VAL
122
A
LYS
123
n
23
LYS
123
A
VAL
124
n
24
VAL
124
A
GLY
125
n
25
GLY
125
A
ASP
126
n
26
ASP
126
A
LYS
127
n
27
LYS
127
A
GLU
128
n
28
GLU
128
A
LEU
129
n
29
LEU
129
A
ALA
130
n
30
ALA
130
A
THR
131
n
31
THR
131
A
ASN
132
n
32
ASN
132
A
ARG
133
n
33
ARG
133
A
ALA
134
n
34
ALA
134
A
ASN
135
n
35
ASN
135
A
LEU
136
n
36
LEU
136
A
GLN
137
n
37
GLN
137
A
SER
138
n
38
SER
138
A
LEU
139
n
39
LEU
139
A
LEU
140
n
40
LEU
140
A
LEU
141
n
41
LEU
141
A
SER
142
n
42
SER
142
A
ALA
143
n
43
ALA
143
A
GLN
144
n
44
GLN
144
A
ILE
145
n
45
ILE
145
A
THR
146
n
46
THR
146
A
GLY
147
n
47
GLY
147
A
MET
148
n
48
MET
148
A
THR
149
n
49
THR
149
A
VAL
150
n
50
VAL
150
A
THR
151
n
51
THR
151
A
ILE
152
n
52
ILE
152
A
LYS
153
n
53
LYS
153
A
THR
154
n
54
THR
154
A
ASN
155
n
55
ASN
155
A
ALA
156
n
56
ALA
156
A
CYS
157
n
57
CYS
157
A
HIS
158
n
58
HIS
158
A
ASN
159
n
59
ASN
159
A
GLY
160
n
60
GLY
160
A
GLY
161
n
61
GLY
161
A
GLY
162
n
62
GLY
162
A
PHE
163
n
63
PHE
163
A
SER
164
n
64
SER
164
A
GLU
165
n
65
GLU
165
A
VAL
166
n
66
VAL
166
A
ILE
167
n
67
ILE
167
A
PHE
168
n
68
PHE
168
A
ARG
169
n
69
ARG
169
A
THR
201
n
1
THR
201
B
PRO
202
n
2
PRO
202
B
ASP
203
n
3
ASP
203
B
CYS
204
n
4
CYS
204
B
VAL
205
n
5
VAL
205
B
THR
206
n
6
THR
206
B
GLY
207
n
7
GLY
207
B
LYS
208
n
8
LYS
208
B
VAL
209
n
9
VAL
209
B
GLU
210
n
10
GLU
210
B
TYR
211
n
11
TYR
211
B
THR
212
n
12
THR
212
B
LYS
213
n
13
LYS
213
B
TYR
214
n
14
TYR
214
B
ASN
215
n
15
ASN
215
B
ASP
216
n
16
ASP
216
B
ASP
217
n
17
ASP
217
B
ASP
218
n
18
ASP
218
B
THR
219
n
19
THR
219
B
PHE
220
n
20
PHE
220
B
THR
221
n
21
THR
221
B
VAL
222
n
22
VAL
222
B
LYS
223
n
23
LYS
223
B
VAL
224
n
24
VAL
224
B
GLY
225
n
25
GLY
225
B
ASP
226
n
26
ASP
226
B
LYS
227
n
27
LYS
227
B
GLU
228
n
28
GLU
228
B
LEU
229
n
29
LEU
229
B
ALA
230
n
30
ALA
230
B
THR
231
n
31
THR
231
B
ASN
232
n
32
ASN
232
B
ARG
233
n
33
ARG
233
B
ALA
234
n
34
ALA
234
B
ASN
235
n
35
ASN
235
B
LEU
236
n
36
LEU
236
B
GLN
237
n
37
GLN
237
B
SER
238
n
38
SER
238
B
LEU
239
n
39
LEU
239
B
LEU
240
n
40
LEU
240
B
LEU
241
n
41
LEU
241
B
SER
242
n
42
SER
242
B
ALA
243
n
43
ALA
243
B
GLN
244
n
44
GLN
244
B
ILE
245
n
45
ILE
245
B
THR
246
n
46
THR
246
B
GLY
247
n
47
GLY
247
B
MET
248
n
48
MET
248
B
THR
249
n
49
THR
249
B
VAL
250
n
50
VAL
250
B
THR
251
n
51
THR
251
B
ILE
252
n
52
ILE
252
B
LYS
253
n
53
LYS
253
B
THR
254
n
54
THR
254
B
ASN
255
n
55
ASN
255
B
ALA
256
n
56
ALA
256
B
CYS
257
n
57
CYS
257
B
HIS
258
n
58
HIS
258
B
ASN
259
n
59
ASN
259
B
GLY
260
n
60
GLY
260
B
GLY
261
n
61
GLY
261
B
GLY
262
n
62
GLY
262
B
PHE
263
n
63
PHE
263
B
SER
264
n
64
SER
264
B
GLU
265
n
65
GLU
265
B
VAL
266
n
66
VAL
266
B
ILE
267
n
67
ILE
267
B
PHE
268
n
68
PHE
268
B
ARG
269
n
69
ARG
269
B
THR
301
n
1
THR
301
C
PRO
302
n
2
PRO
302
C
ASP
303
n
3
ASP
303
C
CYS
304
n
4
CYS
304
C
VAL
305
n
5
VAL
305
C
THR
306
n
6
THR
306
C
GLY
307
n
7
GLY
307
C
LYS
308
n
8
LYS
308
C
VAL
309
n
9
VAL
309
C
GLU
310
n
10
GLU
310
C
TYR
311
n
11
TYR
311
C
THR
312
n
12
THR
312
C
LYS
313
n
13
LYS
313
C
TYR
314
n
14
TYR
314
C
ASN
315
n
15
ASN
315
C
ASP
316
n
16
ASP
316
C
ASP
317
n
17
ASP
317
C
ASP
318
n
18
ASP
318
C
THR
319
n
19
THR
319
C
PHE
320
n
20
PHE
320
C
THR
321
n
21
THR
321
C
VAL
322
n
22
VAL
322
C
LYS
323
n
23
LYS
323
C
VAL
324
n
24
VAL
324
C
GLY
325
n
25
GLY
325
C
ASP
326
n
26
ASP
326
C
LYS
327
n
27
LYS
327
C
GLU
328
n
28
GLU
328
C
LEU
329
n
29
LEU
329
C
ALA
330
n
30
ALA
330
C
THR
331
n
31
THR
331
C
ASN
332
n
32
ASN
332
C
ARG
333
n
33
ARG
333
C
ALA
334
n
34
ALA
334
C
ASN
335
n
35
ASN
335
C
LEU
336
n
36
LEU
336
C
GLN
337
n
37
GLN
337
C
SER
338
n
38
SER
338
C
LEU
339
n
39
LEU
339
C
LEU
340
n
40
LEU
340
C
LEU
341
n
41
LEU
341
C
SER
342
n
42
SER
342
C
ALA
343
n
43
ALA
343
C
GLN
344
n
44
GLN
344
C
ILE
345
n
45
ILE
345
C
THR
346
n
46
THR
346
C
GLY
347
n
47
GLY
347
C
MET
348
n
48
MET
348
C
THR
349
n
49
THR
349
C
VAL
350
n
50
VAL
350
C
THR
351
n
51
THR
351
C
ILE
352
n
52
ILE
352
C
LYS
353
n
53
LYS
353
C
THR
354
n
54
THR
354
C
ASN
355
n
55
ASN
355
C
ALA
356
n
56
ALA
356
C
CYS
357
n
57
CYS
357
C
HIS
358
n
58
HIS
358
C
ASN
359
n
59
ASN
359
C
GLY
360
n
60
GLY
360
C
GLY
361
n
61
GLY
361
C
GLY
362
n
62
GLY
362
C
PHE
363
n
63
PHE
363
C
SER
364
n
64
SER
364
C
GLU
365
n
65
GLU
365
C
VAL
366
n
66
VAL
366
C
ILE
367
n
67
ILE
367
C
PHE
368
n
68
PHE
368
C
ARG
369
n
69
ARG
369
C
THR
401
n
1
THR
401
D
PRO
402
n
2
PRO
402
D
ASP
403
n
3
ASP
403
D
CYS
404
n
4
CYS
404
D
VAL
405
n
5
VAL
405
D
THR
406
n
6
THR
406
D
GLY
407
n
7
GLY
407
D
LYS
408
n
8
LYS
408
D
VAL
409
n
9
VAL
409
D
GLU
410
n
10
GLU
410
D
TYR
411
n
11
TYR
411
D
THR
412
n
12
THR
412
D
LYS
413
n
13
LYS
413
D
TYR
414
n
14
TYR
414
D
ASN
415
n
15
ASN
415
D
ASP
416
n
16
ASP
416
D
ASP
417
n
17
ASP
417
D
ASP
418
n
18
ASP
418
D
THR
419
n
19
THR
419
D
PHE
420
n
20
PHE
420
D
THR
421
n
21
THR
421
D
VAL
422
n
22
VAL
422
D
LYS
423
n
23
LYS
423
D
VAL
424
n
24
VAL
424
D
GLY
425
n
25
GLY
425
D
ASP
426
n
26
ASP
426
D
LYS
427
n
27
LYS
427
D
GLU
428
n
28
GLU
428
D
LEU
429
n
29
LEU
429
D
ALA
430
n
30
ALA
430
D
THR
431
n
31
THR
431
D
ASN
432
n
32
ASN
432
D
ARG
433
n
33
ARG
433
D
ALA
434
n
34
ALA
434
D
ASN
435
n
35
ASN
435
D
LEU
436
n
36
LEU
436
D
GLN
437
n
37
GLN
437
D
SER
438
n
38
SER
438
D
LEU
439
n
39
LEU
439
D
LEU
440
n
40
LEU
440
D
LEU
441
n
41
LEU
441
D
SER
442
n
42
SER
442
D
ALA
443
n
43
ALA
443
D
GLN
444
n
44
GLN
444
D
ILE
445
n
45
ILE
445
D
THR
446
n
46
THR
446
D
GLY
447
n
47
GLY
447
D
MET
448
n
48
MET
448
D
THR
449
n
49
THR
449
D
VAL
450
n
50
VAL
450
D
THR
451
n
51
THR
451
D
ILE
452
n
52
ILE
452
D
LYS
453
n
53
LYS
453
D
THR
454
n
54
THR
454
D
ASN
455
n
55
ASN
455
D
ALA
456
n
56
ALA
456
D
CYS
457
n
57
CYS
457
D
HIS
458
n
58
HIS
458
D
ASN
459
n
59
ASN
459
D
GLY
460
n
60
GLY
460
D
GLY
461
n
61
GLY
461
D
GLY
462
n
62
GLY
462
D
PHE
463
n
63
PHE
463
D
SER
464
n
64
SER
464
D
GLU
465
n
65
GLU
465
D
VAL
466
n
66
VAL
466
D
ILE
467
n
67
ILE
467
D
PHE
468
n
68
PHE
468
D
ARG
469
n
69
ARG
469
D
THR
501
n
1
THR
501
E
PRO
502
n
2
PRO
502
E
ASP
503
n
3
ASP
503
E
CYS
504
n
4
CYS
504
E
VAL
505
n
5
VAL
505
E
THR
506
n
6
THR
506
E
GLY
507
n
7
GLY
507
E
LYS
508
n
8
LYS
508
E
VAL
509
n
9
VAL
509
E
GLU
510
n
10
GLU
510
E
TYR
511
n
11
TYR
511
E
THR
512
n
12
THR
512
E
LYS
513
n
13
LYS
513
E
TYR
514
n
14
TYR
514
E
ASN
515
n
15
ASN
515
E
ASP
516
n
16
ASP
516
E
ASP
517
n
17
ASP
517
E
ASP
518
n
18
ASP
518
E
THR
519
n
19
THR
519
E
PHE
520
n
20
PHE
520
E
THR
521
n
21
THR
521
E
VAL
522
n
22
VAL
522
E
LYS
523
n
23
LYS
523
E
VAL
524
n
24
VAL
524
E
GLY
525
n
25
GLY
525
E
ASP
526
n
26
ASP
526
E
LYS
527
n
27
LYS
527
E
GLU
528
n
28
GLU
528
E
LEU
529
n
29
LEU
529
E
ALA
530
n
30
ALA
530
E
THR
531
n
31
THR
531
E
ASN
532
n
32
ASN
532
E
ARG
533
n
33
ARG
533
E
ALA
534
n
34
ALA
534
E
ASN
535
n
35
ASN
535
E
LEU
536
n
36
LEU
536
E
GLN
537
n
37
GLN
537
E
SER
538
n
38
SER
538
E
LEU
539
n
39
LEU
539
E
LEU
540
n
40
LEU
540
E
LEU
541
n
41
LEU
541
E
SER
542
n
42
SER
542
E
ALA
543
n
43
ALA
543
E
GLN
544
n
44
GLN
544
E
ILE
545
n
45
ILE
545
E
THR
546
n
46
THR
546
E
GLY
547
n
47
GLY
547
E
MET
548
n
48
MET
548
E
THR
549
n
49
THR
549
E
VAL
550
n
50
VAL
550
E
THR
551
n
51
THR
551
E
ILE
552
n
52
ILE
552
E
LYS
553
n
53
LYS
553
E
THR
554
n
54
THR
554
E
ASN
555
n
55
ASN
555
E
ALA
556
n
56
ALA
556
E
CYS
557
n
57
CYS
557
E
HIS
558
n
58
HIS
558
E
ASN
559
n
59
ASN
559
E
GLY
560
n
60
GLY
560
E
GLY
561
n
61
GLY
561
E
GLY
562
n
62
GLY
562
E
PHE
563
n
63
PHE
563
E
SER
564
n
64
SER
564
E
GLU
565
n
65
GLU
565
E
VAL
566
n
66
VAL
566
E
ILE
567
n
67
ILE
567
E
PHE
568
n
68
PHE
568
E
ARG
569
n
69
ARG
569
E
author_and_software_defined_assembly
PISA
5
pentameric
10890
10
13450
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
LYS
127
A
O
LYS
27
A
N
VAL
124
A
N
VAL
24
A
O
THR
121
A
O
THR
21
A
N
LYS
113
A
N
LYS
13
A
O
GLU
165
A
O
GLU
65
A
N
LYS
153
A
N
LYS
53
A
O
VAL
150
A
O
VAL
50
A
N
GLY
107
A
N
GLY
7
B
O
LYS
227
B
O
LYS
27
B
N
VAL
224
B
N
VAL
24
B
O
THR
221
B
O
THR
21
B
N
LYS
213
B
N
LYS
13
B
O
GLU
265
B
O
GLU
65
B
N
LYS
253
B
N
LYS
53
B
O
VAL
250
B
O
VAL
50
B
N
GLY
207
B
N
GLY
7
C
O
LYS
327
C
O
LYS
27
C
N
VAL
324
C
N
VAL
24
C
O
THR
321
C
O
THR
21
C
N
LYS
313
C
N
LYS
13
C
O
GLU
365
C
O
GLU
65
C
N
LYS
353
C
N
LYS
53
C
O
VAL
350
C
O
VAL
50
C
N
GLY
307
C
N
GLY
7
D
O
LYS
427
D
O
LYS
27
D
N
VAL
424
D
N
VAL
24
D
O
THR
421
D
O
THR
21
D
N
LYS
413
D
N
LYS
13
D
O
GLU
465
D
O
GLU
65
D
N
LYS
453
D
N
LYS
53
D
O
VAL
450
D
O
VAL
50
D
N
GLY
407
D
N
GLY
7
E
O
LYS
527
E
O
LYS
27
E
N
VAL
524
E
N
VAL
24
E
O
THR
521
E
O
THR
21
E
N
LYS
513
E
N
LYS
13
E
O
GLU
565
E
O
GLU
65
E
N
LYS
553
E
N
LYS
53
E
O
VAL
550
E
O
VAL
50
E
N
GLY
507
E
N
GLY
7
1
A
ALA
156
-104.12
66.06
1
C
ALA
356
-108.41
61.75
1
E
ALA
556
-100.05
64.77
PARHCSDX.PRO
TOPHCSDX.PRO
PARAM19.SOL
TOPH3.CHO
PARAM3.CHO
TOPH19.SOL
1.034
0.906
3.008
-1.173
2.035
0.139
0.194
0.17
0.17
1.52
38.7
1164
54074
2.1
96.7
THIN SHELLS
1
RESTRAINED
THROUGHOUT
0.0
MOLECULAR REPLACEMENT
1BOS
30.50
0.334
1.52
38.7
389
3232
170
0
2673
0.02
1.9
0.832
1.50
1.345
2.00
1.306
2.00
2.052
2.5
1
RESTRAINTS
1
X-RAY DIFFRACTION
0.319
0.301
1.54
241
1771
23
1.3
82.7
1.52
38.7
1C4Q
54074
0.056
0.056
1
3.2
96.7
0.287
1.52
0.287
2.5
82.7
data scaling
X-GEN
data reduction
X-GEN
phasing
AMoRE
refinement
CNS
0.3D
MUTATED SHIGA-LIKE TOXIN B SUBUNIT (F30A/W34A) COMPLEXED WITH RECEPTOR GB3 ANALOGUE
1
N
N
1
N
N
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
3
N
N
3
N
N
A
ALA
134
A
ALA
34
HELX_P
A
THR
146
A
THR
46
5
1
13
B
ALA
234
B
ALA
34
HELX_P
B
THR
246
B
THR
46
5
2
13
C
ALA
334
C
ALA
34
HELX_P
C
THR
346
C
THR
46
5
3
13
D
ALA
434
D
ALA
34
HELX_P
D
THR
446
D
THR
46
5
4
13
E
ALA
534
E
ALA
34
HELX_P
E
THR
546
E
THR
46
5
5
13
disulf
2.019
A
CYS
104
A
SG
CYS
4
1_555
A
CYS
157
A
SG
CYS
57
1_555
disulf
2.044
B
CYS
204
B
SG
CYS
4
1_555
B
CYS
257
B
SG
CYS
57
1_555
disulf
2.004
C
CYS
304
C
SG
CYS
4
1_555
C
CYS
357
C
SG
CYS
57
1_555
disulf
2.037
D
CYS
404
D
SG
CYS
4
1_555
D
CYS
457
D
SG
CYS
57
1_555
disulf
2.043
E
CYS
504
E
SG
CYS
4
1_555
E
CYS
557
E
SG
CYS
57
1_555
covale
1.402
both
F
BGC
1
F
O4
BGC
1_555
F
GAL
2
F
C1
GAL
1_555
covale
1.415
both
F
GAL
2
F
O4
GAL
1_555
F
GLA
3
F
C1
GLA
1_555
covale
1.384
both
G
BGC
1
G
O4
BGC
1_555
G
GAL
2
G
C1
GAL
1_555
covale
1.429
both
G
GAL
2
G
O4
GAL
1_555
G
GLA
3
G
C1
GLA
1_555
covale
1.390
both
H
BGC
1
H
O4
BGC
1_555
H
GAL
2
H
C1
GAL
1_555
covale
1.409
both
H
GAL
2
H
O4
GAL
1_555
H
GLA
3
H
C1
GLA
1_555
covale
1.399
both
I
BGC
1
I
O4
BGC
1_555
I
GAL
2
I
C1
GAL
1_555
covale
1.388
both
I
GAL
2
I
O4
GAL
1_555
I
GLA
3
I
C1
GLA
1_555
covale
1.399
both
J
BGC
1
J
O4
BGC
1_555
J
GAL
2
J
C1
GAL
1_555
covale
1.431
both
J
GAL
2
J
O4
GAL
1_555
J
GLA
3
J
C1
GLA
1_555
TOXIN
TOXIN, RECEPTOR BINDING, PROTEIN-CARBOHYDRATE RECOGNITION, OB-FOLD
given
0.339709
-0.926657
-0.160949
0.931875
0.308455
0.190956
-0.127306
-0.214854
0.968314
29.11600
-39.92570
4.85190
given
-0.663922
-0.593070
-0.455496
0.615463
-0.779338
0.117636
-0.424751
-0.202240
0.882432
73.47460
-26.83610
18.27150
given
-0.643159
0.561526
-0.520611
-0.582412
-0.800127
-0.143503
-0.497135
0.210914
0.841648
72.81580
25.06570
20.73110
given
0.329328
0.936505
-0.120421
-0.930738
0.300504
-0.208384
-0.158966
0.180707
0.970605
28.18410
40.24800
7.86800
SLTB_BPH30
UNP
1
P08027
21
89
1C4Q
101
169
P08027
A
1
1
69
21
89
1C4Q
201
269
P08027
B
1
1
69
21
89
1C4Q
301
369
P08027
C
1
1
69
21
89
1C4Q
401
469
P08027
D
1
1
69
21
89
1C4Q
501
569
P08027
E
1
1
69
1
PHE
engineered mutation
ALA
130
1C4Q
A
P08027
UNP
50
30
1
TRP
engineered mutation
ALA
134
1C4Q
A
P08027
UNP
54
34
2
PHE
engineered mutation
ALA
230
1C4Q
B
P08027
UNP
50
30
2
TRP
engineered mutation
ALA
234
1C4Q
B
P08027
UNP
54
34
3
PHE
engineered mutation
ALA
330
1C4Q
C
P08027
UNP
50
30
3
TRP
engineered mutation
ALA
334
1C4Q
C
P08027
UNP
54
34
4
PHE
engineered mutation
ALA
430
1C4Q
D
P08027
UNP
50
30
4
TRP
engineered mutation
ALA
434
1C4Q
D
P08027
UNP
54
34
5
PHE
engineered mutation
ALA
530
1C4Q
E
P08027
UNP
50
30
5
TRP
engineered mutation
ALA
534
1C4Q
E
P08027
UNP
54
34
3
3
3
3
3
3
3
3
3
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LYS
127
A
LYS
27
A
THR
131
A
THR
31
A
PHE
120
A
PHE
20
A
VAL
124
A
VAL
24
A
VAL
109
A
VAL
9
A
TYR
114
A
TYR
14
A
GLU
165
A
GLU
65
A
ARG
169
A
ARG
69
A
THR
149
A
THR
49
A
LYS
153
A
LYS
53
A
ASP
103
A
ASP
3
A
LYS
108
A
LYS
8
B
LYS
227
B
LYS
27
B
THR
231
B
THR
31
B
PHE
220
B
PHE
20
B
VAL
224
B
VAL
24
B
VAL
209
B
VAL
9
B
TYR
214
B
TYR
14
B
GLU
265
B
GLU
65
B
ARG
269
B
ARG
69
B
THR
249
B
THR
49
B
LYS
253
B
LYS
53
B
ASP
203
B
ASP
3
B
LYS
208
B
LYS
8
C
LYS
327
C
LYS
27
C
THR
331
C
THR
31
C
PHE
320
C
PHE
20
C
VAL
324
C
VAL
24
C
VAL
309
C
VAL
9
C
TYR
314
C
TYR
14
C
GLU
365
C
GLU
65
C
ARG
369
C
ARG
69
C
THR
349
C
THR
49
C
LYS
353
C
LYS
53
C
ASP
303
C
ASP
3
C
LYS
308
C
LYS
8
D
LYS
427
D
LYS
27
D
THR
431
D
THR
31
D
PHE
420
D
PHE
20
D
VAL
424
D
VAL
24
D
VAL
409
D
VAL
9
D
TYR
414
D
TYR
14
D
GLU
465
D
GLU
65
D
ARG
469
D
ARG
69
D
THR
449
D
THR
49
D
LYS
453
D
LYS
53
D
ASP
403
D
ASP
3
D
LYS
408
D
LYS
8
E
LYS
527
E
LYS
27
E
THR
531
E
THR
31
E
PHE
520
E
PHE
20
E
VAL
524
E
VAL
24
E
VAL
509
E
VAL
9
E
TYR
514
E
TYR
14
E
GLU
565
E
GLU
65
E
ARG
569
E
ARG
69
E
THR
549
E
THR
49
E
LYS
553
E
LYS
53
E
ASP
503
E
ASP
3
E
LYS
508
E
LYS
8
1
P 1