0.013984 0.000000 0.002668 0.000000 0.013885 0.000000 0.000000 0.000000 0.013963 0.00000 0.00000 0.00000 Krishnan, R. Mochalkin, I. Arni, R.K. Tulinsky, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 100.80 90.00 71.510 72.020 72.910 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C30 H36 N6 O3 528.645 2-(2,2-DIPHENYL-ETHYL)-7-METHYL-1,3-DIOXO-2,3,5,8-TETRAHYDRO-1H-[1,2,4]TRIAZOLO [1,2-A]PYRIDAZINE-5-CARBOXYLIC ACID(4-CARBAMIMIDOYL-CYCLOHEXYLMETHYL)-AMIDE non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Na 1 22.990 SODIUM ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C9 H11 N O6 S 261.252 n O-SULFO-L-TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 N C N 163 N N N 164 N N N 165 N C N 166 N C N 167 N C N 168 N C N 169 N C N 170 N C N 171 N C N 172 N C Y 173 N N Y 174 N C N 175 N O Y 176 N N Y 177 N C N 178 N O Y 179 N N N 180 S C N 181 N C N 182 N C N 183 N C N 184 N C N 185 N O N 186 N C N 187 N C Y 188 N C Y 189 N C Y 190 N C Y 191 N C Y 192 N C Y 193 N C Y 194 N C Y 195 N C Y 196 N C Y 197 N C Y 198 N C Y 199 N C N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N N N 237 S C N 238 N C N 239 N O N 240 S C N 241 N C N 242 N C N 243 N C N 244 N O N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N N N 259 S C N 260 N C N 261 N O N 262 N C N 263 N C N 264 N C N 265 N C N 266 N O N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N H N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 N C N 285 N C N 286 N C N 287 N C N 288 N N N 289 N O N 290 N H N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N N N 306 S C N 307 N C N 308 N O N 309 N C N 310 N C N 311 N S N 312 N C N 313 N O N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N NA N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N C Y 335 N C Y 336 N C N 337 N O N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N N N 350 S C N 351 N C N 352 N O N 353 N C N 354 N C N 355 N C N 356 N O N 357 N H N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N N N 367 S C N 368 N C N 369 N O N 370 N C N 371 N O N 372 N O N 373 N H N 374 N H N 375 N H N 376 N H N 377 N H N 378 N H N 379 N H N 380 N N N 381 S C N 382 N C N 383 N O N 384 R C N 385 N O N 386 N C N 387 N O N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N N N 398 S C N 399 N C N 400 N O N 401 N C Y 402 N C Y 403 N C Y 404 N C Y 405 N N Y 406 N C Y 407 N C Y 408 N C Y 409 N C Y 410 N C N 411 N O N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 417 N H N 418 N H N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N N N 425 S C N 426 N C N 427 N O N 428 N C Y 429 N C Y 430 N C Y 431 N C Y 432 N C Y 433 N C Y 434 N C N 435 N O N 436 N O N 437 N H N 438 N H N 439 N H N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N H N 448 N N N 449 S C N 450 N C Y 451 N C Y 452 N C Y 453 N C Y 454 N C Y 455 N C Y 456 N C N 457 N O N 458 N S N 459 N O N 460 N O N 461 N O N 462 N C N 463 N O N 464 N O N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 474 N H N 475 N H N 476 N N N 477 S C N 478 N C N 479 N O N 480 N C N 481 N C N 482 N C N 483 N O N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N H N 492 N H N 493 N H N 494 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 E doub N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing Y 184 N sing Y 185 N sing N 186 N doub Y 187 N sing Y 188 N sing N 189 N sing N 190 N doub Y 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N doub N 197 N sing N 198 N sing N 199 N doub N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing Y 209 N doub Y 210 N sing N 211 N sing Y 212 N sing N 213 N sing Y 214 N doub N 215 N sing Y 216 N sing Y 217 N doub N 218 N sing N 219 N sing Y 220 N doub Y 221 N sing N 222 N sing Y 223 N sing N 224 N sing Y 225 N doub N 226 N sing Y 227 N sing Y 228 N doub N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N doub N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N doub N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N doub N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N doub N 323 N sing N 324 N sing N 325 N sing N 326 N sing Y 327 N doub Y 328 N sing Y 329 N sing N 330 N sing Y 331 N doub N 332 N sing Y 333 N doub N 334 N sing Y 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N doub N 346 N sing N 347 N sing N 348 N sing N 349 N sing N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N doub N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N doub N 392 N sing N 393 N sing N 394 N sing N 395 N sing Y 396 N doub Y 397 N sing Y 398 N sing N 399 N sing Y 400 N doub Y 401 N sing Y 402 N sing N 403 N sing Y 404 N sing Y 405 N doub N 406 N sing Y 407 N doub N 408 N sing Y 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N doub N 420 N sing N 421 N sing N 422 N sing N 423 N sing Y 424 N doub Y 425 N sing Y 426 N sing N 427 N sing Y 428 N doub N 429 N sing Y 430 N doub N 431 N sing Y 432 N sing N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing Y 446 N doub Y 447 N sing Y 448 N sing N 449 N sing Y 450 N doub N 451 N sing Y 452 N doub N 453 N sing Y 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N doub N 459 N doub N 460 N sing N 461 N sing N 462 N doub N 463 N sing N 464 N sing N 465 N sing N 466 N sing N 467 N sing N 468 N sing N 469 N sing N 470 N sing N 471 N doub N 472 N sing N 473 N sing N 474 N sing N 475 N sing N 476 N sing N 477 N sing N 478 N sing N 479 N sing N 480 N sing N 481 N sing N 482 N sing DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 56 294 303 10.1107/S0907444900000068 10713516 Structure of thrombin complexed with selective non-electrophilic inhibitors having cyclohexyl moieties at P1. 2000 10.2210/pdb1c4v/pdb pdb_00001c4v 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 300 1 IMAGE PLATE 1997-08-01 RIGAKU NI FILTER SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 4096.534 THROMBIN:SHORT CHAIN 3.4.21.5 1 nat polymer 29780.219 THROMBIN:LONG CHAIN 3.4.21.5 1 nat polymer 1837.888 HIRUGEN 1 syn polymer 22.990 SODIUM ION 1 syn non-polymer 528.645 2-(2,2-DIPHENYL-ETHYL)-7-METHYL-1,3-DIOXO-2,3,5,8-TETRAHYDRO-1H-[1,2,4]TRIAZOLO [1,2-A]PYRIDAZINE-5-CARBOXYLIC ACID(4-CARBAMIMIDOYL-CYCLOHEXYLMETHYL)-AMIDE 1 syn non-polymer 18.015 water 96 nat water THR-MOL354 THR-MOL354 no no TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR TFGSGEADCGLRPLFEKKSLEDKTERELLESYIDGR 1 polypeptide(L) no no IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE IVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISM LEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVL QVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFY THVFRLKKWIQKVIDQFGE 2 polypeptide(L) no yes ACENEDFEEIPGE(TYS)L ACENEDFEEIPGEYL 3 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample 9606 Homo sapiens BLOOD human Homo sample 9606 Homo sapiens BLOOD 1 2.5 51. 7.5 pH 7.5 software chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_conn struct_ref_seq struct_site chem_comp_atom chem_comp_bond repository Initial release Version format compliance Atomic model Database references Derived calculations Non-polymer description Structure summary Version format compliance Refinement description Data collection Database references Derived calculations Refinement description Data collection 1 0 2000-09-27 1 1 2007-10-16 1 2 2011-07-13 1 3 2017-10-04 1 4 2023-08-09 1 5 2023-11-15 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_leaving_atom_flag _struct_ref_seq.db_align_beg _struct_ref_seq.db_align_end _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _chem_comp_atom.atom_id _chem_comp_bond.atom_id_2 RCSB Y RCSB 1999-09-25 REL NA SODIUM ION IH2 2-(2,2-DIPHENYL-ETHYL)-7-METHYL-1,3-DIOXO-2,3,5,8-TETRAHYDRO-1H-[1,2,4]TRIAZOLO [1,2-A]PYRIDAZINE-5-CARBOXYLIC ACID(4-CARBAMIMIDOYL-CYCLOHEXYLMETHYL)-AMIDE HOH water RESIDUES 148 - 149 IN THE CHAIN 2 WERE DISORDERED AND ARE NOT INCLUDED IN THE COORDINATES. THE ACTIVE SITE INHIBITOR IS IN ITS S CHIRAL FORM. THE IHIBITOR MOLECULE IH2 IS MOL-354 WHICH IS MADE UP OF THREE COMPONENTS 1TMB PDB ENTRY 1TMB PDB experimental model NA 504 4 NA NA 504 2 IH2 370 5 IH2 IH2 370 2 HOH 413 6 HOH HOH 413 1 HOH 415 6 HOH HOH 415 1 HOH 416 6 HOH HOH 416 1 HOH 423 6 HOH HOH 423 1 HOH 424 6 HOH HOH 424 1 HOH 454 6 HOH HOH 454 1 HOH 457 6 HOH HOH 457 1 HOH 458 6 HOH HOH 458 1 HOH 466 6 HOH HOH 466 1 HOH 481 6 HOH HOH 481 1 HOH 510 6 HOH HOH 510 1 HOH 519 6 HOH HOH 519 1 HOH 525 6 HOH HOH 525 1 HOH 400 6 HOH HOH 400 2 HOH 401 6 HOH HOH 401 2 HOH 402 6 HOH HOH 402 2 HOH 403 6 HOH HOH 403 2 HOH 404 6 HOH HOH 404 2 HOH 405 6 HOH HOH 405 2 HOH 406 6 HOH HOH 406 2 HOH 407 6 HOH HOH 407 2 HOH 408 6 HOH HOH 408 2 HOH 409 6 HOH HOH 409 2 HOH 410 6 HOH HOH 410 2 HOH 414 6 HOH HOH 414 2 HOH 417 6 HOH HOH 417 2 HOH 418 6 HOH HOH 418 2 HOH 419 6 HOH HOH 419 2 HOH 420 6 HOH HOH 420 2 HOH 421 6 HOH HOH 421 2 HOH 422 6 HOH HOH 422 2 HOH 425 6 HOH HOH 425 2 HOH 426 6 HOH HOH 426 2 HOH 428 6 HOH HOH 428 2 HOH 431 6 HOH HOH 431 2 HOH 432 6 HOH HOH 432 2 HOH 433 6 HOH HOH 433 2 HOH 434 6 HOH HOH 434 2 HOH 435 6 HOH HOH 435 2 HOH 436 6 HOH HOH 436 2 HOH 437 6 HOH HOH 437 2 HOH 439 6 HOH HOH 439 2 HOH 450 6 HOH HOH 450 2 HOH 451 6 HOH HOH 451 2 HOH 452 6 HOH HOH 452 2 HOH 453 6 HOH HOH 453 2 HOH 456 6 HOH HOH 456 2 HOH 459 6 HOH HOH 459 2 HOH 460 6 HOH HOH 460 2 HOH 461 6 HOH HOH 461 2 HOH 462 6 HOH HOH 462 2 HOH 463 6 HOH HOH 463 2 HOH 464 6 HOH HOH 464 2 HOH 465 6 HOH HOH 465 2 HOH 467 6 HOH HOH 467 2 HOH 468 6 HOH HOH 468 2 HOH 469 6 HOH HOH 469 2 HOH 470 6 HOH HOH 470 2 HOH 471 6 HOH HOH 471 2 HOH 472 6 HOH HOH 472 2 HOH 473 6 HOH HOH 473 2 HOH 474 6 HOH HOH 474 2 HOH 475 6 HOH HOH 475 2 HOH 476 6 HOH HOH 476 2 HOH 477 6 HOH HOH 477 2 HOH 478 6 HOH HOH 478 2 HOH 479 6 HOH HOH 479 2 HOH 480 6 HOH HOH 480 2 HOH 482 6 HOH HOH 482 2 HOH 483 6 HOH HOH 483 2 HOH 484 6 HOH HOH 484 2 HOH 485 6 HOH HOH 485 2 HOH 486 6 HOH HOH 486 2 HOH 487 6 HOH HOH 487 2 HOH 500 6 HOH HOH 500 2 HOH 501 6 HOH HOH 501 2 HOH 503 6 HOH HOH 503 2 HOH 505 6 HOH HOH 505 2 HOH 506 6 HOH HOH 506 2 HOH 507 6 HOH HOH 507 2 HOH 509 6 HOH HOH 509 2 HOH 511 6 HOH HOH 511 2 HOH 512 6 HOH HOH 512 2 HOH 513 6 HOH HOH 513 2 HOH 514 6 HOH HOH 514 2 HOH 515 6 HOH HOH 515 2 HOH 516 6 HOH HOH 516 2 HOH 517 6 HOH HOH 517 2 HOH 518 6 HOH HOH 518 2 HOH 521 6 HOH HOH 521 2 HOH 522 6 HOH HOH 522 2 HOH 523 6 HOH HOH 523 2 HOH 524 6 HOH HOH 524 2 HOH 412 6 HOH HOH 412 3 HOH 430 6 HOH HOH 430 3 HOH 455 6 HOH HOH 455 3 THR 1 n 1 H THR 1 1 PHE 1 n 2 G PHE 1 1 GLY 1 n 3 F GLY 1 1 SER 1 n 4 E SER 1 1 GLY 1 n 5 D GLY 1 1 GLU 1 n 6 C GLU 1 1 ALA 1 n 7 B ALA 1 1 ASP 1 n 8 A ASP 1 1 CYS 1 n 9 CYS 1 1 GLY 2 n 10 GLY 2 1 LEU 3 n 11 LEU 3 1 ARG 4 n 12 ARG 4 1 PRO 5 n 13 PRO 5 1 LEU 6 n 14 LEU 6 1 PHE 7 n 15 PHE 7 1 GLU 8 n 16 GLU 8 1 LYS 9 n 17 LYS 9 1 LYS 10 n 18 LYS 10 1 SER 11 n 19 SER 11 1 LEU 12 n 20 LEU 12 1 GLU 13 n 21 GLU 13 1 ASP 14 n 22 ASP 14 1 LYS 14 n 23 A LYS 14 1 THR 14 n 24 B THR 14 1 GLU 14 n 25 C GLU 14 1 ARG 14 n 26 D ARG 14 1 GLU 14 n 27 E GLU 14 1 LEU 14 n 28 F LEU 14 1 LEU 14 n 29 G LEU 14 1 GLU 14 n 30 H GLU 14 1 SER 14 n 31 I SER 14 1 TYR 14 n 32 J TYR 14 1 ILE 14 n 33 K ILE 14 1 ASP 14 n 34 L ASP 14 1 GLY 14 n 35 M GLY 14 1 ARG 15 n 36 ARG 15 1 ILE 16 n 1 ILE 16 2 VAL 17 n 2 VAL 17 2 GLU 18 n 3 GLU 18 2 GLY 19 n 4 GLY 19 2 SER 20 n 5 SER 20 2 ASP 21 n 6 ASP 21 2 ALA 22 n 7 ALA 22 2 GLU 23 n 8 GLU 23 2 ILE 24 n 9 ILE 24 2 GLY 25 n 10 GLY 25 2 MET 26 n 11 MET 26 2 SER 27 n 12 SER 27 2 PRO 28 n 13 PRO 28 2 TRP 29 n 14 TRP 29 2 GLN 30 n 15 GLN 30 2 VAL 31 n 16 VAL 31 2 MET 32 n 17 MET 32 2 LEU 33 n 18 LEU 33 2 PHE 34 n 19 PHE 34 2 ARG 35 n 20 ARG 35 2 LYS 36 n 21 LYS 36 2 SER 36 n 22 A SER 36 2 PRO 37 n 23 PRO 37 2 GLN 38 n 24 GLN 38 2 GLU 39 n 25 GLU 39 2 LEU 40 n 26 LEU 40 2 LEU 41 n 27 LEU 41 2 CYS 42 n 28 CYS 42 2 GLY 43 n 29 GLY 43 2 ALA 44 n 30 ALA 44 2 SER 45 n 31 SER 45 2 LEU 46 n 32 LEU 46 2 ILE 47 n 33 ILE 47 2 SER 48 n 34 SER 48 2 ASP 49 n 35 ASP 49 2 ARG 50 n 36 ARG 50 2 TRP 51 n 37 TRP 51 2 VAL 52 n 38 VAL 52 2 LEU 53 n 39 LEU 53 2 THR 54 n 40 THR 54 2 ALA 55 n 41 ALA 55 2 ALA 56 n 42 ALA 56 2 HIS 57 n 43 HIS 57 2 CYS 58 n 44 CYS 58 2 LEU 59 n 45 LEU 59 2 LEU 60 n 46 LEU 60 2 TYR 60 n 47 A TYR 60 2 PRO 60 n 48 B PRO 60 2 PRO 60 n 49 C PRO 60 2 TRP 60 n 50 D TRP 60 2 ASP 60 n 51 E ASP 60 2 LYS 60 n 52 F LYS 60 2 ASN 60 n 53 G ASN 60 2 PHE 60 n 54 H PHE 60 2 THR 60 n 55 I THR 60 2 GLU 61 n 56 GLU 61 2 ASN 62 n 57 ASN 62 2 ASP 63 n 58 ASP 63 2 LEU 64 n 59 LEU 64 2 LEU 65 n 60 LEU 65 2 VAL 66 n 61 VAL 66 2 ARG 67 n 62 ARG 67 2 ILE 68 n 63 ILE 68 2 GLY 69 n 64 GLY 69 2 LYS 70 n 65 LYS 70 2 HIS 71 n 66 HIS 71 2 SER 72 n 67 SER 72 2 ARG 73 n 68 ARG 73 2 THR 74 n 69 THR 74 2 ARG 75 n 70 ARG 75 2 TYR 76 n 71 TYR 76 2 GLU 77 n 72 GLU 77 2 ARG 77 n 73 A ARG 77 2 ASN 78 n 74 ASN 78 2 ILE 79 n 75 ILE 79 2 GLU 80 n 76 GLU 80 2 LYS 81 n 77 LYS 81 2 ILE 82 n 78 ILE 82 2 SER 83 n 79 SER 83 2 MET 84 n 80 MET 84 2 LEU 85 n 81 LEU 85 2 GLU 86 n 82 GLU 86 2 LYS 87 n 83 LYS 87 2 ILE 88 n 84 ILE 88 2 TYR 89 n 85 TYR 89 2 ILE 90 n 86 ILE 90 2 HIS 91 n 87 HIS 91 2 PRO 92 n 88 PRO 92 2 ARG 93 n 89 ARG 93 2 TYR 94 n 90 TYR 94 2 ASN 95 n 91 ASN 95 2 TRP 96 n 92 TRP 96 2 ARG 97 n 93 ARG 97 2 GLU 97 n 94 A GLU 97 2 ASN 98 n 95 ASN 98 2 LEU 99 n 96 LEU 99 2 ASP 100 n 97 ASP 100 2 ARG 101 n 98 ARG 101 2 ASP 102 n 99 ASP 102 2 ILE 103 n 100 ILE 103 2 ALA 104 n 101 ALA 104 2 LEU 105 n 102 LEU 105 2 MET 106 n 103 MET 106 2 LYS 107 n 104 LYS 107 2 LEU 108 n 105 LEU 108 2 LYS 109 n 106 LYS 109 2 LYS 110 n 107 LYS 110 2 PRO 111 n 108 PRO 111 2 VAL 112 n 109 VAL 112 2 ALA 113 n 110 ALA 113 2 PHE 114 n 111 PHE 114 2 SER 115 n 112 SER 115 2 ASP 116 n 113 ASP 116 2 TYR 117 n 114 TYR 117 2 ILE 118 n 115 ILE 118 2 HIS 119 n 116 HIS 119 2 PRO 120 n 117 PRO 120 2 VAL 121 n 118 VAL 121 2 CYS 122 n 119 CYS 122 2 LEU 123 n 120 LEU 123 2 PRO 124 n 121 PRO 124 2 ASP 125 n 122 ASP 125 2 ARG 126 n 123 ARG 126 2 GLU 127 n 124 GLU 127 2 THR 128 n 125 THR 128 2 ALA 129 n 126 ALA 129 2 ALA 129 n 127 A ALA 129 2 SER 129 n 128 B SER 129 2 LEU 129 n 129 C LEU 129 2 LEU 130 n 130 LEU 130 2 GLN 131 n 131 GLN 131 2 ALA 132 n 132 ALA 132 2 GLY 133 n 133 GLY 133 2 TYR 134 n 134 TYR 134 2 LYS 135 n 135 LYS 135 2 GLY 136 n 136 GLY 136 2 ARG 137 n 137 ARG 137 2 VAL 138 n 138 VAL 138 2 THR 139 n 139 THR 139 2 GLY 140 n 140 GLY 140 2 TRP 141 n 141 TRP 141 2 GLY 142 n 142 GLY 142 2 ASN 143 n 143 ASN 143 2 LEU 144 n 144 LEU 144 2 LYS 145 n 145 LYS 145 2 GLU 146 n 146 GLU 146 2 THR 147 n 147 THR 147 2 n 148 A 147 2 n 149 B 147 2 n 150 C 147 2 n 151 D 147 2 n 152 E 147 2 n 153 F 147 2 n 154 G 147 2 GLY 150 n 155 GLY 150 2 GLN 151 n 156 GLN 151 2 PRO 152 n 157 PRO 152 2 SER 153 n 158 SER 153 2 VAL 154 n 159 VAL 154 2 LEU 155 n 160 LEU 155 2 GLN 156 n 161 GLN 156 2 VAL 157 n 162 VAL 157 2 VAL 158 n 163 VAL 158 2 ASN 159 n 164 ASN 159 2 LEU 160 n 165 LEU 160 2 PRO 161 n 166 PRO 161 2 ILE 162 n 167 ILE 162 2 VAL 163 n 168 VAL 163 2 GLU 164 n 169 GLU 164 2 ARG 165 n 170 ARG 165 2 PRO 166 n 171 PRO 166 2 VAL 167 n 172 VAL 167 2 CYS 168 n 173 CYS 168 2 LYS 169 n 174 LYS 169 2 ASP 170 n 175 ASP 170 2 SER 171 n 176 SER 171 2 THR 172 n 177 THR 172 2 ARG 173 n 178 ARG 173 2 ILE 174 n 179 ILE 174 2 ARG 175 n 180 ARG 175 2 ILE 176 n 181 ILE 176 2 THR 177 n 182 THR 177 2 ASP 178 n 183 ASP 178 2 ASN 179 n 184 ASN 179 2 MET 180 n 185 MET 180 2 PHE 181 n 186 PHE 181 2 CYS 182 n 187 CYS 182 2 ALA 183 n 188 ALA 183 2 GLY 184 n 189 GLY 184 2 TYR 184 n 190 A TYR 184 2 LYS 185 n 191 LYS 185 2 PRO 186 n 192 PRO 186 2 ASP 186 n 193 A ASP 186 2 GLU 186 n 194 B GLU 186 2 GLY 186 n 195 C GLY 186 2 LYS 186 n 196 D LYS 186 2 ARG 187 n 197 ARG 187 2 GLY 188 n 198 GLY 188 2 ASP 189 n 199 ASP 189 2 ALA 190 n 200 ALA 190 2 CYS 191 n 201 CYS 191 2 GLU 192 n 202 GLU 192 2 GLY 193 n 203 GLY 193 2 ASP 194 n 204 ASP 194 2 SER 195 n 205 SER 195 2 GLY 196 n 206 GLY 196 2 GLY 197 n 207 GLY 197 2 PRO 198 n 208 PRO 198 2 PHE 199 n 209 PHE 199 2 VAL 200 n 210 VAL 200 2 MET 201 n 211 MET 201 2 LYS 202 n 212 LYS 202 2 SER 203 n 213 SER 203 2 PRO 204 n 214 PRO 204 2 PHE 204 n 215 A PHE 204 2 ASN 204 n 216 B ASN 204 2 ASN 205 n 217 ASN 205 2 ARG 206 n 218 ARG 206 2 TRP 207 n 219 TRP 207 2 TYR 208 n 220 TYR 208 2 GLN 209 n 221 GLN 209 2 MET 210 n 222 MET 210 2 GLY 211 n 223 GLY 211 2 ILE 212 n 224 ILE 212 2 VAL 213 n 225 VAL 213 2 SER 214 n 226 SER 214 2 TRP 215 n 227 TRP 215 2 GLY 216 n 228 GLY 216 2 ALA 217 n 229 GLU 217 2 GLY 219 n 230 GLY 219 2 CYS 220 n 231 CYS 220 2 ASP 221 n 232 ASP 221 2 ARG 221 n 233 A ARG 221 2 ASP 222 n 234 ASP 222 2 GLY 223 n 235 GLY 223 2 LYS 224 n 236 LYS 224 2 TYR 225 n 237 TYR 225 2 GLY 226 n 238 GLY 226 2 PHE 227 n 239 PHE 227 2 TYR 228 n 240 TYR 228 2 THR 229 n 241 THR 229 2 HIS 230 n 242 HIS 230 2 VAL 231 n 243 VAL 231 2 PHE 232 n 244 PHE 232 2 ARG 233 n 245 ARG 233 2 LEU 234 n 246 LEU 234 2 LYS 235 n 247 LYS 235 2 LYS 236 n 248 LYS 236 2 TRP 237 n 249 TRP 237 2 ILE 238 n 250 ILE 238 2 GLN 239 n 251 GLN 239 2 LYS 240 n 252 LYS 240 2 VAL 241 n 253 VAL 241 2 ILE 242 n 254 ILE 242 2 ASP 243 n 255 ASP 243 2 GLN 244 n 256 GLN 244 2 PHE 245 n 257 PHE 245 2 GLY 246 n 258 GLY 246 2 GLU 247 n 259 GLU 247 2 n 1 554 3 n 2 555 3 n 3 556 3 n 4 557 3 n 5 558 3 ASP 550 n 6 ASP 559 3 PHE 560 n 7 PHE 560 3 GLU 570 n 8 GLU 561 3 GLU 580 n 9 GLU 562 3 ILE 590 n 10 ILE 563 3 PRO 600 n 11 PRO 564 3 GLU 610 n 12 GLY 565 3 GLU 620 n 13 GLU 566 3 TYS 630 n 14 TYS 567 3 LEU 640 n 15 LEU 568 3 author_defined_assembly 3 trimeric 3 TYS 567 O-SULFO-L-TYROSINE C TYS 14 TYR 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 2 O LYS 81 B O LYS 77 2 N ILE 68 B N ILE 63 2 O LEU 65 B O LEU 60 2 N PHE 34 B N PHE 19 2 O VAL 31 B O VAL 16 2 N ALA 44 B N ALA 30 2 O VAL 17 B O VAL 2 2 N MET 106 B N MET 103 2 O LEU 105 B O LEU 102 2 N TYR 89 B N TYR 85 2 O GLY 136 B O GLY 136 2 N LEU 160 B N LEU 165 2 O PHE 181 B O PHE 186 2 N TYR 228 B N TYR 240 2 O PHE 227 B O PHE 239 2 N TRP 215 B N TRP 227 2 O TYR 208 B O TYR 220 2 N MET 201 B N MET 211 1 2 CG GLU 217 B CG GLU 229 1 Y 1 2 CD GLU 217 B CD GLU 229 1 Y 1 2 OE1 GLU 217 B OE1 GLU 229 1 Y 1 2 OE2 GLU 217 B OE2 GLU 229 1 Y A 1 2 TRP 147 B TRP 148 1 Y B 1 2 THR 147 B THR 149 1 Y C 1 2 ALA 147 B ALA 150 1 Y D 1 2 ASN 147 B ASN 151 1 Y E 1 2 VAL 147 B VAL 152 1 Y F 1 2 GLY 147 B GLY 153 1 Y G 1 2 LYS 147 B LYS 154 1 Y 1 3 ALA 554 C ALA 1 1 Y 1 3 CYS 555 C CYS 2 1 Y 1 3 GLU 556 C GLU 3 1 Y 1 3 ASN 557 C ASN 4 1 Y 1 3 GLU 558 C GLU 5 1 Y 1 2 2 NH2 O ARG THR 165 177 1.53 G D 1 1 1 O N PHE GLY 1 1 1.98 1 2 2 NH1 O ARG LEU 50 108 2.04 1 2 2 NZ O LYS SER 70 72 2.05 1 2 3 NH2 OD1 ARG ASP 73 559 2.08 1 3 3 CB OE1 PRO GLU 564 566 2.14 G 1 1 2 O NZ PHE LYS 1 235 2.17 A 1 2 ARG 221 11.42 A 1 2 ARG 77 0.130 SIDE CHAIN 1 2 ARG 173 0.102 SIDE CHAIN 1 2 ARG 175 0.172 SIDE CHAIN A 1 2 ARG 221 0.130 SIDE CHAIN A 1 2 2 C N ASP ARG 221 221 1.79 G G G 1 -12.57 1.80 110.60 98.03 1 1 1 N CA CB PHE PHE PHE 1 1 1 N F F E 1 9.80 1.60 122.70 132.50 1 1 1 O C N GLY GLY SER 1 1 1 Y D D D 1 13.18 1.80 120.60 133.78 1 1 1 CA C O GLY GLY GLY 1 1 1 N C C C 1 33.17 2.20 113.40 146.57 1 1 1 CA CB CG GLU GLU GLU 1 1 1 N C C C 1 16.49 2.70 114.20 130.69 1 1 1 CB CG CD GLU GLU GLU 1 1 1 N C C C 1 -12.81 2.10 120.10 107.29 1 1 1 CA C O GLU GLU GLU 1 1 1 N C C B 1 16.76 2.20 117.20 133.96 1 1 1 CA C N GLU GLU ALA 1 1 1 Y B B B 1 -12.05 1.50 110.10 98.05 1 1 1 CB CA C ALA ALA ALA 1 1 1 N B B B 1 10.53 1.40 110.10 120.63 1 1 1 N CA CB ALA ALA ALA 1 1 1 N A A 1 -15.20 2.20 117.20 102.00 1 1 1 CA C N ASP ASP CYS 1 1 1 Y 1 9.19 1.40 123.60 132.79 1 1 1 CD NE CZ ARG ARG ARG 4 4 4 N 1 -7.35 1.10 119.40 112.05 1 1 1 NH1 CZ NH2 ARG ARG ARG 4 4 4 N 1 4.59 0.50 120.30 124.89 1 1 1 NE CZ NH2 ARG ARG ARG 4 4 4 N 1 13.13 2.00 118.30 131.43 1 1 1 CG CD OE1 GLU GLU GLU 13 13 13 N 1 12.95 2.00 110.40 123.35 1 1 1 CB CA C ASP ASP ASP 14 14 14 N 1 -10.97 0.90 118.30 107.33 1 1 1 CB CG OD2 ASP ASP ASP 14 14 14 N C C C 1 -13.65 2.00 110.40 96.75 1 1 1 CB CA C GLU GLU GLU 14 14 14 N D D D 1 18.50 1.40 123.60 142.10 1 1 1 CD NE CZ ARG ARG ARG 14 14 14 N D D D 1 3.31 0.50 120.30 123.61 1 1 1 NE CZ NH2 ARG ARG ARG 14 14 14 N G G G 1 22.50 1.90 110.20 132.70 1 1 1 CB CA C LEU LEU LEU 14 14 14 N G G G 1 11.20 1.70 111.00 122.20 1 1 1 CB CG CD2 LEU LEU LEU 14 14 14 N L L L 1 5.65 0.90 118.30 123.95 1 1 1 CB CG OD1 ASP ASP ASP 14 14 14 N L L L 1 -7.87 0.90 118.30 110.43 1 1 1 CB CG OD2 ASP ASP ASP 14 14 14 N 1 -18.27 1.40 123.60 105.33 1 1 1 CD NE CZ ARG ARG ARG 15 15 15 N 1 14.07 1.10 119.40 133.47 1 1 1 NH1 CZ NH2 ARG ARG ARG 15 15 15 N 1 -7.26 0.50 120.30 113.04 1 1 1 NE CZ NH1 ARG ARG ARG 15 15 15 N 1 -6.85 0.50 120.30 113.45 1 1 1 NE CZ NH2 ARG ARG ARG 15 15 15 N 1 17.65 2.20 113.40 131.05 2 2 2 CA CB CG GLU GLU GLU 18 18 18 N 1 -5.91 0.90 118.30 112.39 2 2 2 CB CG OD2 ASP ASP ASP 21 21 21 N 1 -9.29 1.50 110.50 101.21 2 2 2 N CA CB SER SER SER 27 27 27 N 1 10.39 1.60 122.70 133.09 2 2 2 O C N MET MET LEU 32 32 33 Y 1 10.06 1.60 122.70 132.76 2 2 2 O C N LEU LEU PHE 33 33 34 Y 1 21.58 1.40 123.60 145.18 2 2 2 CD NE CZ ARG ARG ARG 35 35 35 N A A A 1 -10.52 1.50 110.50 99.98 2 2 2 N CA CB SER SER SER 36 36 36 N 1 10.99 1.80 110.60 121.59 2 2 2 N CA CB GLN GLN GLN 38 38 38 N 1 -12.72 2.00 118.30 105.58 2 2 2 CG CD OE2 GLU GLU GLU 39 39 39 N 1 15.27 1.90 110.20 125.47 2 2 2 CB CA C LEU LEU LEU 41 41 41 N 1 12.11 1.10 114.20 126.31 2 2 2 CA CB SG CYS CYS CYS 42 42 42 N 1 -10.73 1.50 110.50 99.77 2 2 2 N CA CB SER SER SER 48 48 48 N 1 3.59 0.50 120.30 123.89 2 2 2 NE CZ NH1 ARG ARG ARG 50 50 50 N 1 -5.30 0.50 120.30 115.00 2 2 2 NE CZ NH2 ARG ARG ARG 50 50 50 N 1 -13.21 2.10 120.10 106.89 2 2 2 CA C O LEU LEU LEU 53 53 53 N 1 11.46 1.90 110.20 121.66 2 2 2 CB CA C LEU LEU LEU 60 60 60 N A A A 1 4.62 0.60 121.00 125.62 2 2 2 CB CG CD2 TYR TYR TYR 60 60 60 N A A A 1 -8.33 0.60 121.00 112.67 2 2 2 CB CG CD1 TYR TYR TYR 60 60 60 N E E E 1 11.83 1.90 123.30 135.13 2 2 2 OD1 CG OD2 ASP ASP ASP 60 60 60 N E E E 1 -7.87 0.90 118.30 110.43 2 2 2 CB CG OD1 ASP ASP ASP 60 60 60 N H H H 1 -5.80 0.70 120.80 115.00 2 2 2 CB CG CD1 PHE PHE PHE 60 60 60 N 1 13.29 1.90 111.40 124.69 2 2 2 CB CA C VAL VAL VAL 66 66 66 N 1 -14.58 2.20 111.50 96.92 2 2 2 N CA CB VAL VAL VAL 66 66 66 N 1 12.93 1.50 110.90 123.83 2 2 2 CA CB CG1 VAL VAL VAL 66 66 66 N 1 10.74 0.50 120.30 131.04 2 2 2 NE CZ NH1 ARG ARG ARG 67 67 67 N 1 -5.30 0.50 120.30 115.00 2 2 2 NE CZ NH2 ARG ARG ARG 67 67 67 N 1 9.52 1.40 123.60 133.12 2 2 2 CD NE CZ ARG ARG ARG 73 73 73 N 1 10.08 0.50 120.30 130.38 2 2 2 NE CZ NH1 ARG ARG ARG 73 73 73 N 1 -8.37 0.50 120.30 111.93 2 2 2 NE CZ NH2 ARG ARG ARG 73 73 73 N 1 16.09 2.50 121.70 137.79 2 2 2 C N CA TYR GLU GLU 76 77 77 Y A A 1 28.58 2.50 121.70 150.28 2 2 2 C N CA GLU ARG ARG 77 77 77 Y A A A 1 -3.10 0.50 120.30 117.20 2 2 2 NE CZ NH2 ARG ARG ARG 77 77 77 N 1 19.28 2.20 113.40 132.68 2 2 2 CA CB CG ASN ASN ASN 78 78 78 N 1 13.20 1.60 122.70 135.90 2 2 2 O C N MET MET LEU 84 84 85 Y 1 17.85 2.80 113.90 131.75 2 2 2 CB CG1 CD1 ILE ILE ILE 90 90 90 N 1 -12.76 1.70 113.60 100.84 2 2 2 CA CB CG HIS HIS HIS 91 91 91 N 1 -10.64 1.40 123.60 112.96 2 2 2 CD NE CZ ARG ARG ARG 97 97 97 N 1 -3.16 0.50 120.30 117.14 2 2 2 NE CZ NH1 ARG ARG ARG 97 97 97 N A A A 1 11.34 1.20 123.30 134.64 2 2 2 OE1 CD OE2 GLU GLU GLU 97 97 97 N 1 10.27 1.60 122.70 132.97 2 2 2 O C N ASP ASP ARG 100 100 101 Y 1 7.69 1.10 119.40 127.09 2 2 2 NH1 CZ NH2 ARG ARG ARG 101 101 101 N 1 -7.30 0.50 120.30 113.00 2 2 2 NE CZ NH2 ARG ARG ARG 101 101 101 N 1 -6.66 0.90 118.30 111.64 2 2 2 CB CG OD2 ASP ASP ASP 102 102 102 N 1 -3.81 0.60 121.00 117.19 2 2 2 CB CG CD2 TYR TYR TYR 117 117 117 N 1 14.92 2.40 120.20 135.12 2 2 2 CA C O PRO PRO PRO 120 120 120 N 1 -10.50 1.70 111.00 100.50 2 2 2 CB CG CD2 LEU LEU LEU 123 123 123 N 1 6.30 0.90 118.30 124.60 2 2 2 CB CG OD1 ASP ASP ASP 125 125 125 N 1 18.29 1.40 123.60 141.89 2 2 2 CD NE CZ ARG ARG ARG 126 126 126 N 1 5.15 0.50 120.30 125.45 2 2 2 NE CZ NH1 ARG ARG ARG 126 126 126 N 1 -4.41 0.50 120.30 115.89 2 2 2 NE CZ NH2 ARG ARG ARG 126 126 126 N 1 4.06 0.60 121.00 125.06 2 2 2 CB CG CD2 TYR TYR TYR 134 134 134 N 1 -4.32 0.60 121.00 116.68 2 2 2 CB CG CD1 TYR TYR TYR 134 134 134 N 1 -14.60 1.40 123.60 109.00 2 2 2 CD NE CZ ARG ARG ARG 137 137 137 N 1 9.05 1.10 119.40 128.45 2 2 2 NH1 CZ NH2 ARG ARG ARG 137 137 137 N 1 -7.26 0.50 120.30 113.04 2 2 2 NE CZ NH2 ARG ARG ARG 137 137 137 N 1 20.53 2.50 121.70 142.23 2 2 2 C N CA GLY TRP TRP 140 141 141 Y 1 22.41 2.30 115.30 137.71 2 2 2 CA CB CG LEU LEU LEU 144 144 144 N 1 12.74 2.10 120.10 132.84 2 2 2 CA C O THR THR THR 147 147 147 N 1 16.86 1.90 111.40 128.26 2 2 2 CB CA C VAL VAL VAL 154 154 154 N 1 -15.98 2.20 111.50 95.52 2 2 2 N CA CB VAL VAL VAL 154 154 154 N 1 -10.42 1.60 122.70 112.28 2 2 2 O C N GLN GLN VAL 156 156 157 Y 1 10.30 1.50 110.90 121.20 2 2 2 CA CB CG2 VAL VAL VAL 157 157 157 N 1 12.47 1.90 121.10 133.57 2 2 2 O C N LEU LEU PRO 160 160 161 Y 1 -11.93 1.40 123.60 111.67 2 2 2 CD NE CZ ARG ARG ARG 165 165 165 N 1 -5.48 0.50 120.30 114.82 2 2 2 NE CZ NH1 ARG ARG ARG 165 165 165 N 1 6.82 0.50 120.30 127.12 2 2 2 NE CZ NH2 ARG ARG ARG 165 165 165 N 1 7.46 1.20 111.50 118.96 2 2 2 CB CA C CYS CYS CYS 168 168 168 N 1 11.20 1.60 122.70 133.90 2 2 2 O C N ASP ASP SER 170 170 171 Y 1 13.73 2.10 111.80 125.53 2 2 2 CG CD NE ARG ARG ARG 173 173 173 N 1 14.69 1.40 123.60 138.29 2 2 2 CD NE CZ ARG ARG ARG 173 173 173 N 1 -15.16 1.10 119.40 104.24 2 2 2 NH1 CZ NH2 ARG ARG ARG 173 173 173 N 1 9.86 0.50 120.30 130.16 2 2 2 NE CZ NH1 ARG ARG ARG 173 173 173 N 1 3.16 0.50 120.30 123.46 2 2 2 NE CZ NH2 ARG ARG ARG 173 173 173 N 1 -15.35 1.40 123.60 108.25 2 2 2 CD NE CZ ARG ARG ARG 175 175 175 N 1 -3.71 0.50 120.30 116.59 2 2 2 NE CZ NH1 ARG ARG ARG 175 175 175 N 1 -6.87 0.50 120.30 113.43 2 2 2 NE CZ NH2 ARG ARG ARG 175 175 175 N 1 8.42 0.90 118.30 126.72 2 2 2 CB CG OD1 ASP ASP ASP 178 178 178 N 1 -7.30 0.90 118.30 111.00 2 2 2 CB CG OD2 ASP ASP ASP 178 178 178 N 1 14.12 2.00 110.40 124.52 2 2 2 CB CA C PHE PHE PHE 181 181 181 N 1 9.31 1.50 110.80 120.11 2 2 2 N CA CB CYS CYS CYS 182 182 182 N A A A 1 -6.59 0.60 121.00 114.41 2 2 2 CB CG CD2 TYR TYR TYR 184 184 184 N A A A 1 6.43 0.60 121.00 127.43 2 2 2 CB CG CD1 TYR TYR TYR 184 184 184 N 1 15.59 2.20 113.40 128.99 2 2 2 CA CB CG LYS LYS LYS 185 185 185 N A A A 1 6.50 0.90 118.30 124.80 2 2 2 CB CG OD1 ASP ASP ASP 186 186 186 N D D D 1 14.18 2.00 110.40 124.58 2 2 2 CB CA C LYS LYS LYS 186 186 186 N 1 5.48 0.50 120.30 125.78 2 2 2 NE CZ NH1 ARG ARG ARG 187 187 187 N 1 13.45 2.00 110.40 123.85 2 2 2 CB CA C ASP ASP ASP 189 189 189 N 1 10.55 0.90 118.30 128.85 2 2 2 CB CG OD2 ASP ASP ASP 189 189 189 N 1 -18.13 2.70 111.00 92.87 2 2 2 N CA C ALA ALA ALA 190 190 190 N 1 7.52 1.20 111.50 119.02 2 2 2 CB CA C CYS CYS CYS 191 191 191 N A A A 1 -7.48 1.20 120.10 112.62 2 2 2 CZ CE2 CD2 PHE PHE PHE 204 204 204 N 1 14.01 2.00 110.40 124.41 2 2 2 CB CA C ASN ASN ASN 205 205 205 N 1 6.24 0.50 120.30 126.54 2 2 2 NE CZ NH1 ARG ARG ARG 206 206 206 N A A A 1 -6.91 0.50 120.30 113.39 2 2 2 NE CZ NH1 ARG ARG ARG 221 221 221 N A A A 1 12.37 0.50 120.30 132.67 2 2 2 NE CZ NH2 ARG ARG ARG 221 221 221 N 1 -10.80 0.90 118.30 107.50 2 2 2 CB CG OD2 ASP ASP ASP 222 222 222 N 1 20.79 2.50 121.70 142.49 2 2 2 C N CA LYS TYR TYR 224 225 225 Y 1 -4.41 0.60 121.00 116.59 2 2 2 CB CG CD2 TYR TYR TYR 225 225 225 N 1 22.99 1.40 123.60 146.59 2 2 2 CD NE CZ ARG ARG ARG 233 233 233 N 1 3.72 0.50 120.30 124.02 2 2 2 NE CZ NH1 ARG ARG ARG 233 233 233 N 1 18.44 1.90 110.20 128.64 2 2 2 CB CA C LEU LEU LEU 234 234 234 N 1 19.88 2.50 113.10 132.98 2 2 2 N CA C GLY GLY GLY 246 246 246 N 1 -9.80 1.20 123.30 113.50 2 2 2 OE1 CD OE2 GLU GLU GLU 247 247 247 N 1 12.99 2.00 118.30 131.29 3 3 3 CG CD OE1 GLU GLU GLU 561 561 561 N 1 -17.32 2.00 118.30 100.98 3 3 3 CG CD OE2 GLU GLU GLU 561 561 561 N 1 13.74 2.20 113.40 127.14 3 3 3 CA CB CG GLU GLU GLU 566 566 566 N 1 2 2 CB OG SER SER 27 27 -0.092 0.013 1.418 1.326 N 1 2 2 NE CZ ARG ARG 137 137 0.093 0.013 1.326 1.419 N 1 1 2 NH2 O ARG LYS 15 169 2.06 1_555 4_556 L 1 1 2 O NH2 ASP ARG 14 173 2.15 1_555 4_556 G 1 1 PHE 1 -130.74 -123.34 C 1 1 GLU 1 -70.03 -72.11 B 1 1 ALA 1 168.26 -41.62 1 1 PHE 7 -130.70 -75.11 J 1 1 TYR 14 -80.71 34.37 L 1 1 ASP 14 85.44 119.71 1 2 PRO 37 -48.75 -179.65 1 2 CYS 42 -179.29 -177.52 1 2 ALA 44 162.67 176.73 1 2 THR 54 -121.94 -163.09 A 1 2 TYR 60 -160.52 83.70 G 1 2 ASN 60 -164.35 51.50 1 2 HIS 71 -127.51 -54.97 A 1 2 ARG 77 -7.13 -71.02 A 1 2 GLU 97 -119.84 -77.21 1 2 SER 115 -173.60 -171.34 1 2 HIS 119 -170.53 135.57 1 2 LEU 155 -39.71 130.90 1 2 SER 195 -34.73 145.01 1 3 PRO 564 -51.21 109.92 20.70 0.167 2.1 7.0 11633 75. 1 THROUGHOUT 4.0 MOLECULAR REPLACEMENT PDB ENTRY 1TMB 0.2 7.0 2.1 7.0 96 2548 40 0 2412 0.015 0.020 0.035 0.030 0.055 0.050 1.1 1.0 1.8 1.5 2.6 2.0 3.8 2.5 0.027 0.030 0.15 0.20 0.22 0.60 0.31 0.60 0.28 0.60 4. 3 20. 15 30. 20 2.1 15 1C4V 14337 1 0.06 0.12 1 14.4 2.1 61 0.09 2.1 2.3 2.5 0.25 1 2. 74 model building X-PLOR refinement PROLSQ phasing X-PLOR SELECTIVE NON ELECTROPHILIC THROMBIN INHIBITORS WITH CYCLOHEXYL MOIETIES. 1 N N 2 N N 3 N N 4 N N 5 N N 6 N N 6 N N 6 N N 1 GLU 8 A GLU 16 HELX_P 1 LYS 10 A LYS 18 5 1 3 1 GLU 14 A GLU 25 HELX_P 1 SER 14 A SER 31 1 2 7 C I 2 ALA 56 B ALA 42 HELX_P 2 CYS 58 B CYS 44 5 3 3 2 PRO 60 B PRO 48 HELX_P 2 TRP 60 B TRP 50 5 4 3 B D 2 GLU 61 B GLU 56 HELX_P 2 ASP 63 B ASP 58 5 5 3 2 ARG 126 B ARG 123 HELX_P 2 LEU 129 B LEU 129 1 6 7 C 2 ARG 165 B ARG 170 HELX_P 2 SER 171 B SER 176 1 7 7 2 PRO 186 B PRO 192 HELX_P 2 GLU 186 B GLU 194 5 8 3 B 2 PHE 232 B PHE 244 HELX_P 2 PHE 245 B PHE 257 5 9 14 disulf 2.026 1 CYS 1 A SG CYS 9 1_555 2 CYS 122 B SG CYS 119 1_555 disulf 2.121 2 CYS 42 B SG CYS 28 1_555 2 CYS 58 B SG CYS 44 1_555 disulf 2.119 2 CYS 168 B SG CYS 173 1_555 2 CYS 182 B SG CYS 187 1_555 disulf 2.052 2 CYS 191 B SG CYS 201 1_555 2 CYS 220 B SG CYS 231 1_555 covale 1.337 both 3 GLU 566 C C GLU 13 1_555 3 TYS 567 C N TYS 14 1_555 covale 1.323 both 3 TYS 567 C C TYS 14 1_555 3 LEU 568 C N LEU 15 1_555 HYDROLASE/HYDROLASE INHIBITOR COMPLEX (SERINE PROTEASE-INHIBITOR), HYDROLASE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX 2 SER 36 B SER 22 A 1 2 PRO 37 B PRO 23 -5.72 THRB_HUMAN UNP 1 328 P00734 THRB_HUMAN UNP 2 364 P00734 1C4V PDB 3 554 1C4V 328 363 1C4V 1 15 P00734 H 1 1 1 36 364 622 1C4V 16 247 P00734 2 2 1 259 554 568 1C4V 554 568 1C4V 3 3 1 15 4 3 2 4 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel 2 LYS 81 B LYS 77 2 MET 84 B MET 80 2 LEU 64 B LEU 59 2 ILE 68 B ILE 63 2 GLN 30 B GLN 15 2 ARG 35 B ARG 20 2 GLU 39 B GLU 25 2 SER 45 B SER 31 2 TRP 51 B TRP 37 2 THR 54 B THR 40 2 ALA 104 B ALA 101 2 LEU 108 B LEU 105 2 LEU 59 B LEU 45 2 ILE 90 B ILE 86 2 LYS 135 B LYS 135 2 GLY 140 B GLY 140 2 GLN 156 B GLN 161 2 PRO 161 B PRO 166 2 MET 180 B MET 185 2 ALA 183 B ALA 188 2 GLY 226 B GLY 238 2 HIS 230 B HIS 242 2 TRP 207 B TRP 219 2 TRP 215 B TRP 227 2 PRO 198 B PRO 208 2 LYS 202 B LYS 212 ACTIVE SITE. Author 3 BINDING SITE FOR RESIDUE NA 2 504 2 NA 504 Software 3 BINDING SITE FOR RESIDUE IH2 2 370 2 IH2 370 Software 17 BINDING SITE FOR CHAIN 3 OF HIRUGEN Software 19 2 HIS 57 B HIS 43 3 1_555 2 ASP 102 B ASP 99 3 1_555 2 SER 195 B SER 205 3 1_555 2 ARG 187 B ARG 197 3 1_555 2 ASP 221 B ASP 232 3 1_555 2 ASP 222 B ASP 234 3 1_555 2 HIS 57 B HIS 43 17 1_555 2 TRP 60 B TRP 50 D 17 1_555 2 GLU 97 B GLU 94 A 17 1_555 2 ASN 98 B ASN 95 17 1_555 2 LEU 99 B LEU 96 17 1_555 2 ILE 174 B ILE 179 17 1_555 2 ASP 189 B ASP 199 17 1_555 2 ALA 190 B ALA 200 17 1_555 2 SER 195 B SER 205 17 1_555 2 VAL 213 B VAL 225 17 1_555 2 SER 214 B SER 226 17 1_555 2 TRP 215 B TRP 227 17 1_555 2 GLY 216 B GLY 228 17 1_555 2 GLU 217 B GLU 229 17 1_555 2 GLY 219 B GLY 230 17 1_555 2 GLY 226 B GLY 238 17 1_555 2 HOH 410 G HOH 17 1_555 2 PHE 34 B PHE 19 19 1_555 2 LYS 36 B LYS 21 19 1_555 2 GLN 38 B GLN 24 19 1_555 2 LEU 65 B LEU 60 19 1_555 2 ARG 67 B ARG 62 19 1_555 2 ARG 73 B ARG 68 19 1_555 2 THR 74 B THR 69 19 1_555 2 ARG 75 B ARG 70 19 2_555 2 ARG 75 B ARG 70 19 1_555 2 TYR 76 B TYR 71 19 1_555 2 LYS 81 B LYS 77 19 1_555 2 ILE 82 B ILE 78 19 1_555 2 MET 84 B MET 80 19 1_555 2 GLN 151 B GLN 156 19 1_555 2 SER 153 B SER 158 19 2_555 2 HOH 509 G HOH 19 2_555 3 HOH 412 H HOH 19 1_555 3 HOH 430 H HOH 19 1_555 3 HOH 455 H HOH 19 1_555 5 C 1 2 1