0.024131
0.000000
0.000000
0.000000
0.024131
0.000000
0.000000
0.000000
0.004931
0.00000
0.00000
0.00000
Kleywegt, G.J.
Bergfors, T.
Jones, T.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
41.440
41.440
202.800
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C20 H28 O2
300.435
RETINOIC ACID
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
C
N
291
N
C
N
292
N
C
N
293
N
C
N
294
N
C
N
295
N
C
N
296
N
C
N
297
N
C
N
298
N
C
N
299
N
C
N
300
N
C
N
301
N
C
N
302
N
C
N
303
N
C
N
304
N
C
N
305
N
C
N
306
N
C
N
307
N
C
N
308
N
C
N
309
N
C
N
310
N
O
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
H
N
322
N
H
N
323
N
H
N
324
N
H
N
325
N
H
N
326
N
H
N
327
N
H
N
328
N
H
N
329
N
H
N
330
N
H
N
331
N
H
N
332
N
H
N
333
N
H
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
N
N
341
S
C
N
342
N
C
N
343
N
O
N
344
N
C
N
345
N
O
N
346
N
O
N
347
N
H
N
348
N
H
N
349
N
H
N
350
N
H
N
351
N
H
N
352
N
H
N
353
N
H
N
354
N
N
N
355
S
C
N
356
N
C
N
357
N
O
N
358
R
C
N
359
N
O
N
360
N
C
N
361
N
O
N
362
N
H
N
363
N
H
N
364
N
H
N
365
N
H
N
366
N
H
N
367
N
H
N
368
N
H
N
369
N
H
N
370
N
H
N
371
N
N
N
372
S
C
N
373
N
C
N
374
N
O
N
375
N
C
Y
376
N
C
Y
377
N
C
Y
378
N
C
Y
379
N
N
Y
380
N
C
Y
381
N
C
Y
382
N
C
Y
383
N
C
Y
384
N
C
N
385
N
O
N
386
N
H
N
387
N
H
N
388
N
H
N
389
N
H
N
390
N
H
N
391
N
H
N
392
N
H
N
393
N
H
N
394
N
H
N
395
N
H
N
396
N
H
N
397
N
H
N
398
N
N
N
399
S
C
N
400
N
C
N
401
N
O
N
402
N
C
Y
403
N
C
Y
404
N
C
Y
405
N
C
Y
406
N
C
Y
407
N
C
Y
408
N
C
N
409
N
O
N
410
N
O
N
411
N
H
N
412
N
H
N
413
N
H
N
414
N
H
N
415
N
H
N
416
N
H
N
417
N
H
N
418
N
H
N
419
N
H
N
420
N
H
N
421
N
H
N
422
N
N
N
423
S
C
N
424
N
C
N
425
N
O
N
426
N
C
N
427
N
C
N
428
N
C
N
429
N
O
N
430
N
H
N
431
N
H
N
432
N
H
N
433
N
H
N
434
N
H
N
435
N
H
N
436
N
H
N
437
N
H
N
438
N
H
N
439
N
H
N
440
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
sing
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
doub
N
291
N
sing
N
292
N
sing
N
293
E
doub
N
294
N
sing
N
295
N
sing
N
296
N
sing
N
297
E
doub
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
E
doub
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
E
doub
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
doub
N
310
N
sing
N
311
N
sing
N
312
N
sing
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
N
317
N
sing
N
318
N
sing
N
319
N
sing
N
320
N
sing
N
321
N
sing
N
322
N
sing
N
323
N
sing
N
324
N
sing
N
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
doub
N
334
N
sing
N
335
N
sing
N
336
N
sing
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
doub
N
347
N
sing
N
348
N
sing
N
349
N
sing
N
350
N
sing
N
351
N
sing
N
352
N
sing
N
353
N
sing
N
354
N
sing
N
355
N
sing
N
356
N
sing
N
357
N
sing
N
358
N
sing
N
359
N
sing
N
360
N
sing
N
361
N
sing
N
362
N
doub
N
363
N
sing
N
364
N
sing
N
365
N
sing
N
366
N
sing
Y
367
N
doub
Y
368
N
sing
Y
369
N
sing
N
370
N
sing
Y
371
N
doub
Y
372
N
sing
Y
373
N
sing
N
374
N
sing
Y
375
N
sing
Y
376
N
doub
N
377
N
sing
Y
378
N
doub
N
379
N
sing
Y
380
N
sing
N
381
N
sing
N
382
N
sing
N
383
N
sing
N
384
N
sing
N
385
N
sing
N
386
N
sing
N
387
N
sing
N
388
N
sing
N
389
N
sing
N
390
N
doub
N
391
N
sing
N
392
N
sing
N
393
N
sing
N
394
N
sing
Y
395
N
doub
Y
396
N
sing
Y
397
N
sing
N
398
N
sing
Y
399
N
doub
N
400
N
sing
Y
401
N
doub
N
402
N
sing
Y
403
N
sing
N
404
N
sing
N
405
N
sing
N
406
N
sing
N
407
N
sing
N
408
N
sing
N
409
N
sing
N
410
N
sing
N
411
N
sing
N
412
N
sing
N
413
N
sing
N
414
N
doub
N
415
N
sing
N
416
N
sing
N
417
N
sing
N
418
N
sing
N
419
N
sing
N
420
N
sing
N
421
N
sing
N
422
N
sing
N
423
N
sing
N
424
N
sing
N
425
N
sing
UK
Structure
STRUE6
2005
0969-2126
2
1241
1258
10.1016/S0969-2126(94)00125-1
7704533
Crystal structures of cellular retinoic acid binding proteins I and II in complex with all-trans-retinoic acid and a synthetic retinoid.
1994
US
Adv.Protein Chem.
APCHA2
0433
0065-3233
45
89
Lipid-Binding Proteins: A Family of Fatty Acid and Retinoid Transport Proteins
1994
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
50
370
Crystallisation and Preliminary X-Ray Analysis of Recombinant Bovine Cellular Retinoic Acid-Binding Protein
1994
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
230
1225
Crystallographic Studies on a Family of Lipophilic Transport Proteins. Refinement of P2 Myelin Protein and the Structure Determination and Refinement of Cellular Retinol-Binding Protein in Complex with All-Trans-Retinol
1993
UK
Embo J.
EMJODG
0897
0261-4189
7
1597
The Three-Dimensional Structure of P2 Myelin Protein
1988
10.2210/pdb1cbr/pdb
pdb_00001cbr
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
15480.392
CELLULAR RETINOIC ACID BINDING PROTEIN TYPE I
2
man
polymer
300.435
RETINOIC ACID
2
syn
non-polymer
18.015
water
28
nat
water
no
no
PNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGEGFEEETVDGRK
CRSLPTWENENKIHCTQTLLEGDGPKTYWTRELANDELILTFGADDVVCTRIYVRE
PNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGEGFEEETVDGRK
CRSLPTWENENKIHCTQTLLEGDGPKTYWTRELANDELILTFGADDVVCTRIYVRE
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
Mus
Escherichia
Escherichia coli
sample
BL21
MOUSE CRABP
10090
Mus musculus
469008
Escherichia coli BL21(DE3)
BL21 (DE3)
PT7-7
2.81
56.25
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Other
1
0
1995-01-26
1
1
2008-03-24
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1994-09-28
REL
REL
REA
RETINOIC ACID
HOH
water
REA
200
2
REA
REA
200
A
REA
200
2
REA
REA
200
B
HOH
300
3
HOH
HOH
201
A
HOH
301
3
HOH
HOH
202
A
HOH
302
3
HOH
HOH
203
A
HOH
303
3
HOH
HOH
204
A
HOH
304
3
HOH
HOH
205
A
HOH
305
3
HOH
HOH
206
A
HOH
306
3
HOH
HOH
207
A
HOH
307
3
HOH
HOH
208
A
HOH
308
3
HOH
HOH
209
A
HOH
309
3
HOH
HOH
210
A
HOH
310
3
HOH
HOH
211
A
HOH
311
3
HOH
HOH
212
A
HOH
312
3
HOH
HOH
213
A
HOH
313
3
HOH
HOH
214
A
HOH
300
3
HOH
HOH
201
B
HOH
301
3
HOH
HOH
202
B
HOH
302
3
HOH
HOH
203
B
HOH
303
3
HOH
HOH
204
B
HOH
304
3
HOH
HOH
205
B
HOH
305
3
HOH
HOH
206
B
HOH
306
3
HOH
HOH
207
B
HOH
307
3
HOH
HOH
208
B
HOH
308
3
HOH
HOH
209
B
HOH
309
3
HOH
HOH
210
B
HOH
310
3
HOH
HOH
211
B
HOH
311
3
HOH
HOH
212
B
HOH
312
3
HOH
HOH
213
B
HOH
313
3
HOH
HOH
214
B
PRO
1
n
1
PRO
1
A
ASN
2
n
2
ASN
2
A
PHE
3
n
3
PHE
3
A
ALA
4
n
4
ALA
4
A
GLY
5
n
5
GLY
5
A
THR
6
n
6
THR
6
A
TRP
7
n
7
TRP
7
A
LYS
8
n
8
LYS
8
A
MET
9
n
9
MET
9
A
ARG
10
n
10
ARG
10
A
SER
11
n
11
SER
11
A
SER
12
n
12
SER
12
A
GLU
13
n
13
GLU
13
A
ASN
14
n
14
ASN
14
A
PHE
15
n
15
PHE
15
A
ASP
16
n
16
ASP
16
A
GLU
17
n
17
GLU
17
A
LEU
18
n
18
LEU
18
A
LEU
19
n
19
LEU
19
A
LYS
20
n
20
LYS
20
A
ALA
21
n
21
ALA
21
A
LEU
22
n
22
LEU
22
A
GLY
23
n
23
GLY
23
A
VAL
24
n
24
VAL
24
A
ASN
25
n
25
ASN
25
A
ALA
26
n
26
ALA
26
A
MET
27
n
27
MET
27
A
LEU
28
n
28
LEU
28
A
ARG
29
n
29
ARG
29
A
LYS
30
n
30
LYS
30
A
VAL
31
n
31
VAL
31
A
ALA
32
n
32
ALA
32
A
VAL
33
n
33
VAL
33
A
ALA
34
n
34
ALA
34
A
ALA
35
n
35
ALA
35
A
ALA
36
n
36
ALA
36
A
SER
37
n
37
SER
37
A
LYS
38
n
38
LYS
38
A
PRO
39
n
39
PRO
39
A
HIS
40
n
40
HIS
40
A
VAL
41
n
41
VAL
41
A
GLU
42
n
42
GLU
42
A
ILE
43
n
43
ILE
43
A
ARG
44
n
44
ARG
44
A
GLN
45
n
45
GLN
45
A
ASP
46
n
46
ASP
46
A
GLY
47
n
47
GLY
47
A
ASP
48
n
48
ASP
48
A
GLN
49
n
49
GLN
49
A
PHE
50
n
50
PHE
50
A
TYR
51
n
51
TYR
51
A
ILE
52
n
52
ILE
52
A
LYS
53
n
53
LYS
53
A
THR
54
n
54
THR
54
A
SER
55
n
55
SER
55
A
THR
56
n
56
THR
56
A
THR
57
n
57
THR
57
A
VAL
58
n
58
VAL
58
A
ARG
59
n
59
ARG
59
A
THR
60
n
60
THR
60
A
THR
61
n
61
THR
61
A
GLU
62
n
62
GLU
62
A
ILE
63
n
63
ILE
63
A
ASN
64
n
64
ASN
64
A
PHE
65
n
65
PHE
65
A
LYS
66
n
66
LYS
66
A
VAL
67
n
67
VAL
67
A
GLY
68
n
68
GLY
68
A
GLU
69
n
69
GLU
69
A
GLY
70
n
70
GLY
70
A
PHE
71
n
71
PHE
71
A
GLU
72
n
72
GLU
72
A
GLU
73
n
73
GLU
73
A
GLU
74
n
74
GLU
74
A
THR
75
n
75
THR
75
A
VAL
76
n
76
VAL
76
A
ASP
77
n
77
ASP
77
A
GLY
78
n
78
GLY
78
A
ARG
79
n
79
ARG
79
A
LYS
80
n
80
LYS
80
A
CYS
81
n
81
CYS
81
A
ARG
82
n
82
ARG
82
A
SER
83
n
83
SER
83
A
LEU
84
n
84
LEU
84
A
PRO
85
n
85
PRO
85
A
THR
86
n
86
THR
86
A
TRP
87
n
87
TRP
87
A
GLU
88
n
88
GLU
88
A
ASN
89
n
89
ASN
89
A
GLU
90
n
90
GLU
90
A
ASN
91
n
91
ASN
91
A
LYS
92
n
92
LYS
92
A
ILE
93
n
93
ILE
93
A
HIS
94
n
94
HIS
94
A
CYS
95
n
95
CYS
95
A
THR
96
n
96
THR
96
A
GLN
97
n
97
GLN
97
A
THR
98
n
98
THR
98
A
LEU
99
n
99
LEU
99
A
LEU
100
n
100
LEU
100
A
GLU
101
n
101
GLU
101
A
GLY
102
n
102
GLY
102
A
ASP
103
n
103
ASP
103
A
GLY
104
n
104
GLY
104
A
PRO
105
n
105
PRO
105
A
LYS
106
n
106
LYS
106
A
THR
107
n
107
THR
107
A
TYR
108
n
108
TYR
108
A
TRP
109
n
109
TRP
109
A
THR
110
n
110
THR
110
A
ARG
111
n
111
ARG
111
A
GLU
112
n
112
GLU
112
A
LEU
113
n
113
LEU
113
A
ALA
114
n
114
ALA
114
A
ASN
115
n
115
ASN
115
A
ASP
116
n
116
ASP
116
A
GLU
117
n
117
GLU
117
A
LEU
118
n
118
LEU
118
A
ILE
119
n
119
ILE
119
A
LEU
120
n
120
LEU
120
A
THR
121
n
121
THR
121
A
PHE
122
n
122
PHE
122
A
GLY
123
n
123
GLY
123
A
ALA
124
n
124
ALA
124
A
ASP
125
n
125
ASP
125
A
ASP
126
n
126
ASP
126
A
VAL
127
n
127
VAL
127
A
VAL
128
n
128
VAL
128
A
CYS
129
n
129
CYS
129
A
THR
130
n
130
THR
130
A
ARG
131
n
131
ARG
131
A
ILE
132
n
132
ILE
132
A
TYR
133
n
133
TYR
133
A
VAL
134
n
134
VAL
134
A
ARG
135
n
135
ARG
135
A
GLU
136
n
136
GLU
136
A
PRO
1
n
1
PRO
1
B
ASN
2
n
2
ASN
2
B
PHE
3
n
3
PHE
3
B
ALA
4
n
4
ALA
4
B
GLY
5
n
5
GLY
5
B
THR
6
n
6
THR
6
B
TRP
7
n
7
TRP
7
B
LYS
8
n
8
LYS
8
B
MET
9
n
9
MET
9
B
ARG
10
n
10
ARG
10
B
SER
11
n
11
SER
11
B
SER
12
n
12
SER
12
B
GLU
13
n
13
GLU
13
B
ASN
14
n
14
ASN
14
B
PHE
15
n
15
PHE
15
B
ASP
16
n
16
ASP
16
B
GLU
17
n
17
GLU
17
B
LEU
18
n
18
LEU
18
B
LEU
19
n
19
LEU
19
B
LYS
20
n
20
LYS
20
B
ALA
21
n
21
ALA
21
B
LEU
22
n
22
LEU
22
B
GLY
23
n
23
GLY
23
B
VAL
24
n
24
VAL
24
B
ASN
25
n
25
ASN
25
B
ALA
26
n
26
ALA
26
B
MET
27
n
27
MET
27
B
LEU
28
n
28
LEU
28
B
ARG
29
n
29
ARG
29
B
LYS
30
n
30
LYS
30
B
VAL
31
n
31
VAL
31
B
ALA
32
n
32
ALA
32
B
VAL
33
n
33
VAL
33
B
ALA
34
n
34
ALA
34
B
ALA
35
n
35
ALA
35
B
ALA
36
n
36
ALA
36
B
SER
37
n
37
SER
37
B
LYS
38
n
38
LYS
38
B
PRO
39
n
39
PRO
39
B
HIS
40
n
40
HIS
40
B
VAL
41
n
41
VAL
41
B
GLU
42
n
42
GLU
42
B
ILE
43
n
43
ILE
43
B
ARG
44
n
44
ARG
44
B
GLN
45
n
45
GLN
45
B
ASP
46
n
46
ASP
46
B
GLY
47
n
47
GLY
47
B
ASP
48
n
48
ASP
48
B
GLN
49
n
49
GLN
49
B
PHE
50
n
50
PHE
50
B
TYR
51
n
51
TYR
51
B
ILE
52
n
52
ILE
52
B
LYS
53
n
53
LYS
53
B
THR
54
n
54
THR
54
B
SER
55
n
55
SER
55
B
THR
56
n
56
THR
56
B
THR
57
n
57
THR
57
B
VAL
58
n
58
VAL
58
B
ARG
59
n
59
ARG
59
B
THR
60
n
60
THR
60
B
THR
61
n
61
THR
61
B
GLU
62
n
62
GLU
62
B
ILE
63
n
63
ILE
63
B
ASN
64
n
64
ASN
64
B
PHE
65
n
65
PHE
65
B
LYS
66
n
66
LYS
66
B
VAL
67
n
67
VAL
67
B
GLY
68
n
68
GLY
68
B
GLU
69
n
69
GLU
69
B
GLY
70
n
70
GLY
70
B
PHE
71
n
71
PHE
71
B
GLU
72
n
72
GLU
72
B
GLU
73
n
73
GLU
73
B
GLU
74
n
74
GLU
74
B
THR
75
n
75
THR
75
B
VAL
76
n
76
VAL
76
B
ASP
77
n
77
ASP
77
B
GLY
78
n
78
GLY
78
B
ARG
79
n
79
ARG
79
B
LYS
80
n
80
LYS
80
B
CYS
81
n
81
CYS
81
B
ARG
82
n
82
ARG
82
B
SER
83
n
83
SER
83
B
LEU
84
n
84
LEU
84
B
PRO
85
n
85
PRO
85
B
THR
86
n
86
THR
86
B
TRP
87
n
87
TRP
87
B
GLU
88
n
88
GLU
88
B
ASN
89
n
89
ASN
89
B
GLU
90
n
90
GLU
90
B
ASN
91
n
91
ASN
91
B
LYS
92
n
92
LYS
92
B
ILE
93
n
93
ILE
93
B
HIS
94
n
94
HIS
94
B
CYS
95
n
95
CYS
95
B
THR
96
n
96
THR
96
B
GLN
97
n
97
GLN
97
B
THR
98
n
98
THR
98
B
LEU
99
n
99
LEU
99
B
LEU
100
n
100
LEU
100
B
GLU
101
n
101
GLU
101
B
GLY
102
n
102
GLY
102
B
ASP
103
n
103
ASP
103
B
GLY
104
n
104
GLY
104
B
PRO
105
n
105
PRO
105
B
LYS
106
n
106
LYS
106
B
THR
107
n
107
THR
107
B
TYR
108
n
108
TYR
108
B
TRP
109
n
109
TRP
109
B
THR
110
n
110
THR
110
B
ARG
111
n
111
ARG
111
B
GLU
112
n
112
GLU
112
B
LEU
113
n
113
LEU
113
B
ALA
114
n
114
ALA
114
B
ASN
115
n
115
ASN
115
B
ASP
116
n
116
ASP
116
B
GLU
117
n
117
GLU
117
B
LEU
118
n
118
LEU
118
B
ILE
119
n
119
ILE
119
B
LEU
120
n
120
LEU
120
B
THR
121
n
121
THR
121
B
PHE
122
n
122
PHE
122
B
GLY
123
n
123
GLY
123
B
ALA
124
n
124
ALA
124
B
ASP
125
n
125
ASP
125
B
ASP
126
n
126
ASP
126
B
VAL
127
n
127
VAL
127
B
VAL
128
n
128
VAL
128
B
CYS
129
n
129
CYS
129
B
THR
130
n
130
THR
130
B
ARG
131
n
131
ARG
131
B
ILE
132
n
132
ILE
132
B
TYR
133
n
133
TYR
133
B
VAL
134
n
134
VAL
134
B
ARG
135
n
135
ARG
135
B
GLU
136
n
136
GLU
136
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
PHE
65
A
O
PHE
65
A
N
PHE
50
A
N
PHE
50
A
O
SER
55
A
O
SER
55
A
N
HIS
40
A
N
HIS
40
A
N
ILE
43
A
N
ILE
43
A
O
GLY
5
A
O
GLY
5
A
N
GLU
13
A
N
GLU
13
A
O
THR
130
A
O
THR
130
A
O
TYR
133
A
O
TYR
133
A
N
LEU
118
A
N
LEU
118
A
N
GLY
123
A
N
GLY
123
A
O
TYR
108
A
O
TYR
108
A
O
ARG
111
A
O
ARG
111
A
N
ILE
93
A
N
ILE
93
A
O
THR
98
A
O
THR
98
A
N
ARG
82
A
N
ARG
82
A
N
SER
83
A
N
SER
83
A
O
PHE
71
A
O
PHE
71
B
O
PHE
65
B
O
PHE
65
B
N
PHE
50
B
N
PHE
50
B
O
SER
55
B
O
SER
55
B
N
HIS
40
B
N
HIS
40
B
N
ILE
43
B
N
ILE
43
B
O
GLY
5
B
O
GLY
5
B
N
GLU
13
B
N
GLU
13
B
O
THR
130
B
O
THR
130
B
O
TYR
133
B
O
TYR
133
B
N
LEU
118
B
N
LEU
118
B
N
GLY
123
B
N
GLY
123
B
O
TYR
108
B
O
TYR
108
B
O
ARG
111
B
O
ARG
111
B
N
ILE
93
B
N
ILE
93
B
O
THR
98
B
O
THR
98
B
N
ARG
82
B
N
ARG
82
B
N
SER
83
B
N
SER
83
B
O
PHE
71
B
O
PHE
71
1
A
A
OH
O1
TYR
REA
133
200
2.18
1
B
B
OH
O1
TYR
REA
133
200
2.18
1
B
A
NZ
O
LYS
HOH
66
204
1.56
1_555
3_554
1
B
A
CE
O
LYS
HOH
66
204
2.07
1_555
3_554
1
A
B
NH2
O
ARG
GLU
82
88
2.15
1_555
4_655
1
A
ARG
59
-171.03
128.82
1
A
ASP
77
-87.44
30.85
1
A
GLU
101
-105.23
59.44
1
A
LYS
106
-59.79
101.88
1
A
ASN
115
176.94
81.56
1
A
ALA
124
-168.56
73.59
1
A
ASP
125
64.32
101.42
1
A
ASP
126
65.04
-66.68
1
B
ARG
59
-171.00
128.79
1
B
ASP
77
-87.50
30.89
1
B
GLU
101
-105.22
59.48
1
B
LYS
106
-59.80
101.89
1
B
ASN
115
176.94
81.58
1
B
ALA
124
-168.53
73.61
1
B
ASP
125
64.31
101.39
1
B
ASP
126
65.06
-66.69
49.2
THE LIGAND FOR THIS ENTRY WAS TAKEN FROM ENTRY 1CBS AND
ADJUSTED TO THE DENSITY AS A RIGID BODY BY X-PLOR. THIS
HAS INTRODUCED A SHORT CONTACT (2.2 A) BETWEEN AN OXYGEN OF
THE LIGAND AND THE HYDROXYL OXYGEN OF TYR 133.
THE STRUCTURE WAS REFINED WITH NCS CONSTRAINTS IN X-PLOR
(I.E., THE TWO MOLECULES ARE IDENTICAL). SINCE CONTACTS
DUE TO CRYSTALLOGRAPHIC SYMMETRY ARE NOT EVALUATED IN
X-PLOR IF STRICT NCS IS USED, THIS HAS INTRODUCED THREE
SHORT CONTACTS.
0.3200000
0.2510000
0.2510000
2.9
8.
6743
94.2
1
2.
0.55
2.9
8.
28
2246
44
0
2174
0.009
1.56
26.9
1.25
1CBR
7118
3.
1
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
CRYSTAL STRUCTURE OF CELLULAR RETINOIC-ACID-BINDING PROTEINS I AND II IN COMPLEX WITH ALL-TRANS-RETINOIC ACID AND A SYNTHETIC RETINOID
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
MTRIX
THE TRANSFORMATIONS PRESENTED ON MTRIX RECORDS BELOW
DESCRIBE NON-CRYSTALLOGRAPHIC RELATIONSHIPS AMONG THE
VARIOUS DOMAINS IN THIS ENTRY. APPLYING THE APPROPRIATE
MTRIX TRANSFORMATION TO THE RESIDUES LISTED FIRST WILL
YIELD APPROXIMATE COORDINATES FOR THE RESIDUES LISTED
SECOND.
APPLIED TO TRANSFORMED TO
MTRIX RESIDUES RESIDUES RMSD
M1 A 1 .. A 136 B 1 .. B 136 0.0
BECAUSE OF THE STRICT NON-CRYSTALLOGRAPHIC SYMMETRY USED
IN REFINEMENT, THE TRANSFORMATION DESCRIBED, IN FACT,
YIELDS EXACT COORDINATES FOR CHAIN B WHEN APPLIED TO
CHAIN A.
A
ASN
14
A
ASN
14
HELX_P
A
LEU
22
A
LEU
22
1
1
9
A
ASN
25
A
ASN
25
HELX_P
A
ALA
36
A
ALA
36
1
2
12
B
ASN
14
B
ASN
14
HELX_P
B
LEU
22
B
LEU
22
1
3
9
B
ASN
25
B
ASN
25
HELX_P
B
ALA
36
B
ALA
36
1
4
12
RETINOIC-ACID TRANSPORT
RETINOIC-ACID TRANSPORT
given
0.781496
-0.392775
-0.484758
-0.489669
-0.867614
-0.086429
-0.386636
0.304915
-0.870367
-0.36603
0.05477
-26.27855
RABP1_MOUSE
UNP
1
1
P62965
PNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGEGFEEETVDGRK
CRSLPTWENENKIHCTQTLLEGDGPKTYWTRELANDELILTFGADDVVCTRIYVRE
1
136
1CBR
1
136
P62965
A
1
1
136
1
136
1CBR
1
136
P62965
B
1
1
136
10
10
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
ARG
59
A
ARG
59
A
LYS
66
A
LYS
66
A
GLN
49
A
GLN
49
A
THR
56
A
THR
56
A
HIS
40
A
HIS
40
A
ASP
46
A
ASP
46
A
GLY
5
A
GLY
5
A
GLU
13
A
GLU
13
A
VAL
127
A
VAL
127
A
ARG
135
A
ARG
135
A
GLU
117
A
GLU
117
A
ALA
124
A
ALA
124
A
THR
107
A
THR
107
A
LEU
113
A
LEU
113
A
LYS
92
A
LYS
92
A
LEU
99
A
LEU
99
A
CYS
81
A
CYS
81
A
ASN
89
A
ASN
89
A
PHE
71
A
PHE
71
A
GLU
73
A
GLU
73
B
ARG
59
B
ARG
59
B
LYS
66
B
LYS
66
B
GLN
49
B
GLN
49
B
THR
56
B
THR
56
B
HIS
40
B
HIS
40
B
ASP
46
B
ASP
46
B
GLY
5
B
GLY
5
B
GLU
13
B
GLU
13
B
VAL
127
B
VAL
127
B
ARG
135
B
ARG
135
B
GLU
117
B
GLU
117
B
ALA
124
B
ALA
124
B
THR
107
B
THR
107
B
LEU
113
B
LEU
113
B
LYS
92
B
LYS
92
B
LEU
99
B
LEU
99
B
CYS
81
B
CYS
81
B
ASN
89
B
ASN
89
B
PHE
71
B
PHE
71
B
GLU
73
B
GLU
73
BINDING SITE FOR RESIDUE REA A 200
A
REA
200
Software
5
BINDING SITE FOR RESIDUE REA B 200
B
REA
200
Software
6
A
PRO
39
A
PRO
39
5
1_555
A
THR
56
A
THR
56
5
1_555
A
LEU
120
A
LEU
120
5
1_555
A
ARG
131
A
ARG
131
5
1_555
A
TYR
133
A
TYR
133
5
1_555
A
MET
27
A
MET
27
6
1_555
B
PRO
39
B
PRO
39
6
1_555
B
THR
56
B
THR
56
6
1_555
B
LEU
120
B
LEU
120
6
1_555
B
ARG
131
B
ARG
131
6
1_555
B
TYR
133
B
TYR
133
6
1_555
78
P 43