1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Fletcher, C.M. Harrison, R.A. Lachmann, P.J. Neuhaus, D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK Structure STRUE6 2005 0969-2126 2 185 199 10.1016/S0969-2126(00)00020-4 7520819 Structure of a soluble, glycosylated form of the human complement regulatory protein CD59. 1994 US Protein Sci. PRCIEI 0795 0961-8368 2 2015 Sequence-Specific 1H-NMR Assignments and Folding Topology of Human Cd59 1993 US Immunol.Res. 2031 0257-277X 12 258 Membrane Defence Against Complement Lysis: The Structure and Biological Properties of Cd59 1993 10.2210/pdb1cdq/pdb pdb_00001cdq 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 8970.106 CD59 1 man polymer no no LQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQVYNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLEN LQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQVYNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCNFNEQLEN A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo sample 9606 Homo sapiens database_2 pdbx_database_status pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Database references Derived calculations Other 1 0 1994-09-30 1 1 2008-03-24 1 2 2011-07-13 1 3 2022-02-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site Y BNL 1994-06-01 REL 20 BRUNGER refinement X-PLOR LEU 1 n 1 LEU 1 A GLN 2 n 2 GLN 2 A CYS 3 n 3 CYS 3 A TYR 4 n 4 TYR 4 A ASN 5 n 5 ASN 5 A CYS 6 n 6 CYS 6 A PRO 7 n 7 PRO 7 A ASN 8 n 8 ASN 8 A PRO 9 n 9 PRO 9 A THR 10 n 10 THR 10 A ALA 11 n 11 ALA 11 A ASP 12 n 12 ASP 12 A CYS 13 n 13 CYS 13 A LYS 14 n 14 LYS 14 A THR 15 n 15 THR 15 A ALA 16 n 16 ALA 16 A VAL 17 n 17 VAL 17 A ASN 18 n 18 ASN 18 A CYS 19 n 19 CYS 19 A SER 20 n 20 SER 20 A SER 21 n 21 SER 21 A ASP 22 n 22 ASP 22 A PHE 23 n 23 PHE 23 A ASP 24 n 24 ASP 24 A ALA 25 n 25 ALA 25 A CYS 26 n 26 CYS 26 A LEU 27 n 27 LEU 27 A ILE 28 n 28 ILE 28 A THR 29 n 29 THR 29 A LYS 30 n 30 LYS 30 A ALA 31 n 31 ALA 31 A GLY 32 n 32 GLY 32 A LEU 33 n 33 LEU 33 A GLN 34 n 34 GLN 34 A VAL 35 n 35 VAL 35 A TYR 36 n 36 TYR 36 A ASN 37 n 37 ASN 37 A LYS 38 n 38 LYS 38 A CYS 39 n 39 CYS 39 A TRP 40 n 40 TRP 40 A LYS 41 n 41 LYS 41 A PHE 42 n 42 PHE 42 A GLU 43 n 43 GLU 43 A HIS 44 n 44 HIS 44 A CYS 45 n 45 CYS 45 A ASN 46 n 46 ASN 46 A PHE 47 n 47 PHE 47 A ASN 48 n 48 ASN 48 A ASP 49 n 49 ASP 49 A VAL 50 n 50 VAL 50 A THR 51 n 51 THR 51 A THR 52 n 52 THR 52 A ARG 53 n 53 ARG 53 A LEU 54 n 54 LEU 54 A ARG 55 n 55 ARG 55 A GLU 56 n 56 GLU 56 A ASN 57 n 57 ASN 57 A GLU 58 n 58 GLU 58 A LEU 59 n 59 LEU 59 A THR 60 n 60 THR 60 A TYR 61 n 61 TYR 61 A TYR 62 n 62 TYR 62 A CYS 63 n 63 CYS 63 A CYS 64 n 64 CYS 64 A LYS 65 n 65 LYS 65 A LYS 66 n 66 LYS 66 A ASP 67 n 67 ASP 67 A LEU 68 n 68 LEU 68 A CYS 69 n 69 CYS 69 A ASN 70 n 70 ASN 70 A PHE 71 n 71 PHE 71 A ASN 72 n 72 ASN 72 A GLU 73 n 73 GLU 73 A GLN 74 n 74 GLN 74 A LEU 75 n 75 LEU 75 A GLU 76 n 76 GLU 76 A ASN 77 n 77 ASN 77 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N CYS 3 A N CYS 3 A O VAL 17 A O VAL 17 A O TRP 40 A O TRP 40 A N ALA 25 A N ALA 25 A O CYS 26 A O CYS 26 A N CYS 64 A N CYS 64 1 A ARG 53 0.285 SIDE CHAIN 1 A ARG 55 0.315 SIDE CHAIN 2 A ARG 53 0.218 SIDE CHAIN 2 A ARG 55 0.309 SIDE CHAIN 3 A ARG 53 0.286 SIDE CHAIN 3 A ARG 55 0.282 SIDE CHAIN 4 A ARG 53 0.208 SIDE CHAIN 4 A ARG 55 0.253 SIDE CHAIN 5 A ARG 53 0.316 SIDE CHAIN 5 A ARG 55 0.217 SIDE CHAIN 6 A ARG 53 0.116 SIDE CHAIN 6 A ARG 55 0.195 SIDE CHAIN 7 A ARG 53 0.253 SIDE CHAIN 7 A ARG 55 0.304 SIDE CHAIN 8 A ARG 53 0.316 SIDE CHAIN 8 A ARG 55 0.287 SIDE CHAIN 9 A ARG 53 0.218 SIDE CHAIN 9 A ARG 55 0.270 SIDE CHAIN 10 A ARG 53 0.129 SIDE CHAIN 10 A ARG 55 0.144 SIDE CHAIN 11 A ARG 53 0.300 SIDE CHAIN 11 A ARG 55 0.291 SIDE CHAIN 12 A ARG 53 0.285 SIDE CHAIN 12 A ARG 55 0.108 SIDE CHAIN 13 A ARG 53 0.241 SIDE CHAIN 13 A ARG 55 0.118 SIDE CHAIN 14 A ARG 53 0.289 SIDE CHAIN 14 A ARG 55 0.281 SIDE CHAIN 15 A ARG 53 0.301 SIDE CHAIN 15 A ARG 55 0.276 SIDE CHAIN 16 A ARG 53 0.100 SIDE CHAIN 16 A ARG 55 0.314 SIDE CHAIN 17 A ARG 53 0.134 SIDE CHAIN 17 A ARG 55 0.292 SIDE CHAIN 18 A ARG 53 0.230 SIDE CHAIN 18 A ARG 55 0.313 SIDE CHAIN 19 A ARG 53 0.130 SIDE CHAIN 19 A ARG 55 0.230 SIDE CHAIN 20 A ARG 53 0.157 SIDE CHAIN 20 A ARG 55 0.317 SIDE CHAIN 1 A ASP 12 -171.11 36.13 1 A CYS 19 -63.44 -91.83 1 A SER 20 57.69 -176.15 1 A SER 21 71.97 61.20 1 A ALA 31 -90.06 45.93 1 A ASN 48 171.51 -36.58 1 A ASN 57 -152.06 -69.45 1 A LEU 59 169.20 -178.35 1 A LYS 65 -142.68 31.58 1 A ASN 70 -111.84 70.11 1 A GLU 73 -178.68 33.62 1 A GLN 74 -103.15 -64.53 2 A ALA 11 -92.89 31.44 2 A ASP 12 161.88 40.47 2 A SER 20 -118.91 -154.81 2 A ASP 22 62.00 96.57 2 A ASP 24 -147.38 -41.78 2 A LYS 30 -157.70 82.13 2 A ALA 31 -64.00 -164.40 2 A LEU 33 -131.28 -62.32 2 A ASN 48 -167.51 -43.70 2 A ASN 57 -145.76 56.94 2 A GLU 58 166.14 77.71 2 A LEU 68 67.64 65.68 2 A ASN 72 51.28 72.12 2 A GLU 73 175.70 41.18 2 A GLN 74 -161.68 37.59 2 A LEU 75 -146.37 -57.83 2 A GLU 76 -167.66 93.70 3 A ALA 11 -98.13 33.35 3 A ASP 12 -171.24 41.85 3 A LYS 14 -160.24 29.30 3 A SER 21 58.26 16.40 3 A ASP 22 75.79 93.71 3 A PHE 47 -93.53 52.29 3 A ASN 48 -177.73 -33.22 3 A GLU 58 -60.69 88.89 3 A LYS 65 -151.32 29.59 3 A ASP 67 -41.86 108.19 3 A GLU 73 -165.11 32.83 3 A GLN 74 -145.07 32.98 3 A GLU 76 59.58 -178.47 4 A ASP 12 -164.77 47.95 4 A LYS 14 -151.76 32.99 4 A SER 21 69.05 -175.45 4 A ASP 24 -165.96 24.81 4 A ALA 25 -178.31 116.89 4 A PHE 47 -85.68 45.44 4 A ASN 48 -166.51 -41.57 4 A ARG 55 72.10 30.62 4 A ASN 57 -139.84 -80.40 4 A GLU 58 -65.26 87.98 4 A LYS 65 -140.07 55.02 4 A LEU 68 68.51 67.31 4 A PHE 71 -166.05 -158.85 4 A GLU 73 178.16 52.97 4 A GLN 74 -151.61 -39.46 4 A GLU 76 -114.78 67.70 5 A ALA 11 -101.91 48.54 5 A ASP 12 175.09 36.42 5 A THR 15 -118.54 74.69 5 A ASN 18 -66.27 86.99 5 A CYS 19 -53.90 104.06 5 A SER 21 167.66 87.30 5 A ASP 24 177.05 -29.96 5 A ALA 31 -91.95 54.69 5 A ASN 48 -171.93 -36.37 5 A ARG 55 70.93 37.84 5 A ASN 57 -147.89 -51.63 5 A GLU 73 172.40 64.35 5 A GLN 74 -154.87 -38.89 6 A CYS 6 -174.44 119.59 6 A ASP 12 79.64 71.29 6 A CYS 19 -48.46 164.85 6 A SER 20 -66.38 -168.49 6 A SER 21 -93.29 33.56 6 A ASN 48 179.88 -38.16 6 A ASN 57 -151.66 20.91 6 A GLU 58 -161.04 50.82 6 A LYS 65 -153.69 27.03 6 A ASP 67 -44.89 97.31 6 A LEU 68 73.35 67.43 6 A PHE 71 -56.09 -167.48 6 A ASN 72 -95.89 42.59 6 A GLN 74 -146.04 15.06 6 A LEU 75 -139.10 -68.84 7 A CYS 6 -176.83 90.28 7 A ASP 12 -172.84 40.41 7 A LYS 14 -155.39 24.99 7 A VAL 17 -175.68 135.86 7 A SER 21 163.08 -45.22 7 A ASP 22 -179.50 46.82 7 A ASP 24 -140.66 13.99 7 A ASN 48 -174.38 -34.03 7 A ASN 57 -136.98 -67.62 7 A GLU 58 -64.54 95.61 7 A LEU 59 -166.98 115.62 7 A LEU 68 72.46 71.41 7 A PHE 71 -70.86 -167.14 7 A GLU 73 -168.38 42.65 7 A GLN 74 -133.89 -65.53 7 A GLU 76 75.45 -168.88 8 A ASP 12 -149.48 34.19 8 A LYS 14 -146.79 29.60 8 A CYS 19 -58.18 178.94 8 A SER 20 -76.67 -162.74 8 A GLU 58 -64.97 90.37 8 A GLU 73 -169.07 65.45 8 A GLN 74 -179.23 32.63 8 A LEU 75 -158.58 23.99 9 A ASP 12 -150.73 33.28 9 A LYS 14 -148.21 32.81 9 A ASP 22 163.67 45.81 9 A PHE 23 -155.82 -95.33 9 A ASP 24 78.87 -8.23 9 A PHE 47 -85.48 47.13 9 A ASN 48 -169.33 -39.07 9 A ASN 57 -123.60 -71.22 9 A GLU 58 -65.68 95.15 9 A LEU 59 -167.50 116.97 9 A ASP 67 -57.86 94.79 9 A LEU 68 80.27 75.90 9 A GLU 73 -173.55 34.10 9 A GLU 76 49.06 88.12 10 A ASP 12 -168.00 39.01 10 A SER 20 -64.75 -177.07 10 A ASP 22 -172.42 38.71 10 A ALA 31 -76.33 -166.31 10 A ASN 46 -147.23 41.84 10 A PHE 47 48.88 23.48 10 A ASN 48 -146.77 -42.03 10 A ASN 57 -142.90 -73.72 10 A GLU 58 -66.95 87.25 10 A LYS 65 -143.71 56.99 10 A GLU 73 -174.72 42.91 10 A GLN 74 -166.03 36.30 10 A LEU 75 -173.98 -43.52 10 A GLU 76 -100.36 56.25 11 A ASP 12 175.23 35.03 11 A CYS 19 -62.49 -94.99 11 A SER 20 164.65 -162.61 11 A ASP 22 71.20 35.16 11 A PHE 23 -153.52 85.98 11 A CYS 45 -100.60 72.15 11 A ASN 48 179.66 -41.25 11 A ASP 67 -46.09 99.13 11 A LEU 68 72.83 61.56 11 A ASN 70 -105.83 73.19 11 A ASN 72 70.64 57.51 11 A GLU 73 171.83 69.47 11 A GLN 74 -162.48 27.27 11 A LEU 75 -136.58 -38.00 11 A GLU 76 54.79 -176.07 12 A ALA 11 -108.67 50.15 12 A ASP 12 178.85 35.09 12 A ALA 16 41.90 75.17 12 A SER 20 -50.84 171.63 12 A ASP 22 -95.04 47.27 12 A ALA 31 -94.09 51.46 12 A ASN 48 -137.44 -47.76 12 A ARG 55 73.29 53.46 12 A GLU 56 -138.19 -157.76 12 A ASN 57 176.80 44.46 12 A GLU 58 -179.62 93.08 12 A LEU 59 173.69 174.07 12 A TYR 61 -166.69 116.78 12 A PHE 71 -149.22 34.97 12 A GLU 73 172.89 45.32 12 A GLN 74 -140.16 -52.28 13 A ASP 12 -175.10 36.04 13 A LYS 14 -157.25 38.71 13 A ALA 16 47.02 93.88 13 A SER 20 -66.57 -162.34 13 A PHE 23 -159.42 87.33 13 A ASN 48 177.96 -35.67 13 A ASN 57 -110.52 -80.11 13 A LEU 59 -174.04 114.63 13 A LYS 65 -142.33 29.96 13 A GLU 73 175.73 49.01 13 A GLN 74 -136.02 -37.75 13 A GLU 76 -157.57 47.42 14 A ASN 5 -171.91 104.86 14 A ASP 12 -163.55 34.92 14 A LYS 14 -153.16 19.88 14 A ALA 16 43.08 80.34 14 A ASP 22 179.29 33.14 14 A PHE 23 -177.65 -173.01 14 A ASP 24 -170.31 -67.98 14 A PHE 47 -86.28 45.97 14 A ASN 48 -161.47 -38.03 14 A ASN 57 -154.65 37.90 14 A GLU 58 -163.19 76.50 14 A THR 60 -113.93 65.50 14 A LYS 65 -150.98 55.52 14 A ASP 67 -54.13 102.18 14 A LEU 68 66.70 63.56 14 A ASN 70 -113.42 67.43 14 A PHE 71 -101.48 -167.80 14 A ASN 72 -92.42 53.16 14 A GLU 73 -162.94 52.37 14 A GLU 76 40.99 -163.02 15 A THR 10 26.20 -83.52 15 A ASP 12 85.02 56.19 15 A LYS 14 -166.92 39.38 15 A CYS 19 -68.27 90.09 15 A SER 21 171.06 85.13 15 A ASP 22 48.18 76.38 15 A ASP 24 -149.25 18.87 15 A ALA 25 -168.81 118.44 15 A ASN 46 -146.06 40.18 15 A PHE 47 49.18 22.41 15 A ASN 48 -142.47 -42.27 15 A ASN 57 -139.77 -55.70 15 A LEU 59 175.40 134.83 15 A ASN 70 -88.38 30.24 15 A GLU 73 -158.09 41.76 16 A ALA 11 -96.34 30.11 16 A ASP 12 -145.03 31.57 16 A LYS 14 -148.69 32.58 16 A CYS 19 -57.22 -174.43 16 A SER 20 -86.46 47.66 16 A SER 21 43.02 26.92 16 A ASP 22 -142.06 39.34 16 A ALA 31 -62.32 -166.99 16 A LEU 33 80.14 14.57 16 A ASN 48 -142.63 -37.17 16 A GLU 56 -142.40 -155.92 16 A ASN 57 -168.94 -65.20 16 A LEU 59 175.46 148.99 16 A LYS 65 -143.79 20.90 16 A GLU 73 173.15 47.87 16 A GLN 74 -153.78 24.75 17 A ALA 11 -93.38 42.75 17 A ASP 12 179.95 35.93 17 A LYS 14 -159.76 44.16 17 A ALA 16 53.76 85.10 17 A CYS 19 -52.67 108.85 17 A SER 21 165.20 -68.97 17 A ASP 22 -154.86 32.96 17 A ASP 24 -161.55 -45.90 17 A ALA 31 -60.23 -155.33 17 A PHE 47 -90.59 31.07 17 A ASN 48 -151.01 -38.62 17 A ASN 72 -102.42 69.07 17 A GLU 73 -168.82 36.29 17 A GLU 76 67.07 88.22 18 A ASN 8 -113.77 -168.09 18 A THR 10 26.11 -82.77 18 A ASP 12 80.90 55.25 18 A SER 21 161.53 -51.39 18 A ASP 22 -178.51 53.90 18 A ALA 31 -61.77 -155.72 18 A LEU 33 -128.46 -60.69 18 A GLN 34 -46.87 151.31 18 A PHE 47 -87.08 46.00 18 A ASN 48 -162.85 -41.55 18 A ASN 57 -146.71 -63.85 18 A ASN 70 -86.57 46.79 18 A GLU 73 -166.49 45.68 19 A ASP 12 -179.60 36.92 19 A LYS 14 -144.23 24.80 19 A ALA 16 43.26 77.66 19 A CYS 19 -50.22 -76.93 19 A SER 20 -165.00 -167.01 19 A SER 21 -98.84 32.78 19 A ASP 22 -148.02 38.54 19 A ASP 24 -179.47 -44.24 19 A ALA 31 -62.09 -160.36 19 A ASN 48 -140.72 -33.26 19 A GLU 56 -128.25 -156.62 19 A ASN 57 -164.62 -36.24 19 A TYR 61 -174.43 124.82 19 A LEU 68 72.45 69.70 19 A PHE 71 -129.66 -161.89 19 A GLU 73 -173.14 44.59 19 A GLN 74 -156.03 26.39 19 A LEU 75 -154.84 -40.90 19 A GLU 76 -172.29 143.68 20 A TYR 4 -102.40 73.93 20 A ALA 11 -101.94 41.90 20 A ASP 12 -171.88 34.92 20 A LYS 14 -144.02 36.30 20 A THR 15 -112.48 72.65 20 A ASP 22 -179.40 33.02 20 A LYS 30 -150.43 89.71 20 A ALA 31 -82.99 -158.49 20 A PHE 47 -86.90 41.58 20 A ASN 48 -159.03 -40.65 20 A ARG 55 71.01 31.49 20 A GLU 56 -114.28 -167.81 20 A ASN 57 -167.24 29.35 20 A GLU 58 -165.10 77.13 20 A LYS 65 175.57 54.25 20 A ASP 67 72.31 99.27 20 A PHE 71 -168.61 29.75 20 A GLU 73 -173.69 49.14 20 A GLN 74 -159.46 22.39 20 A LEU 75 -139.81 -56.39 20 A GLU 76 53.97 177.05 model building X-PLOR refinement X-PLOR phasing X-PLOR STRUCTURE OF A SOLUBLE, GLYCOSYLATED FORM OF THE HUMAN COMPLEMENT REGULATORY PROTEIN CD59 1 Y N A PHE 47 A PHE 47 HELX_P IRREGULAR H-BONDS AT C-T END A GLU 56 A GLU 56 1 H1 10 disulf 2.020 A CYS 3 A SG CYS 3 1_555 A CYS 26 A SG CYS 26 1_555 disulf 2.020 A CYS 6 A SG CYS 6 1_555 A CYS 13 A SG CYS 13 1_555 disulf 2.019 A CYS 19 A SG CYS 19 1_555 A CYS 39 A SG CYS 39 1_555 disulf 2.019 A CYS 45 A SG CYS 45 1_555 A CYS 63 A SG CYS 63 1_555 disulf 2.020 A CYS 64 A SG CYS 64 1_555 A CYS 69 A SG CYS 69 1_555 COMPLEMENT REGULATORY PROTEIN COMPLEMENT REGULATORY PROTEIN CD59_HUMAN UNP 1 1 P13987 MGIQGGSVLFGLLLVLAVFCHSGHSLQCYNCPNPTADCKTAVNCSSDFDACLITKAGLQVYNKCWKFEHCNFNDVTTRLR ENELTYYCCKKDLCNFNEQLENGGTSLSEKTVLLLVTPFLAAAWSLHP 26 102 1CDQ 1 77 P13987 A 1 1 77 2 3 anti-parallel anti-parallel anti-parallel A LEU 1 A LEU 1 A CYS 6 A CYS 6 A THR 15 A THR 15 A CYS 19 A CYS 19 A GLN 34 A GLN 34 A TRP 40 A TRP 40 A ALA 25 A ALA 25 A ALA 31 A ALA 31 A LEU 59 A LEU 59 A LYS 65 A LYS 65 1 P 1