0.013532
0.007813
0.000000
0.000000
0.015625
0.000000
0.000000
0.000000
0.016949
0.00000
0.00000
0.00000
SOLVENT OCCUPANCIES WERE REFINED WITHOUT SETTING AN UPPER BOUND. VALUES LARGE THAN 1.0 ARE INDICATIVE OF THE INTRINSIC INACCURACY OF THIS PARAMETER AND OF ITS LARGE CORRELATION WITH THE TEMPERATURE FACTOR.
Rees, B.
Bilwes, A.
Samama, J.P.
Moras, D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
73.900
73.900
59.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
O4 P -3
94.971
PHOSPHATE ION
non-polymer
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
214
281
297
10.1016/0022-2836(90)90161-E
2370666
Cardiotoxin VII4 from Naja mossambica mossambica. The refined crystal structure.
1990
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
84
3132
Crystal Structure of a Snake Venom Cardiotoxin
1987
0.013532
0.007813
0.000000
0.000000
0.015625
0.000000
0.000000
0.000000
0.016949
0.00000
0.00000
0.00000
6727.321
CARDIOTOXIN VII4
2
man
polymer
94.971
PHOSPHATE ION
2
syn
non-polymer
18.015
water
48
nat
water
no
no
LKCNKLIPIAYKTCPEGKNLCYKMMLASKKMVPVKRGCINVCPKNSALVKYVCCSTDRCN
LKCNKLIPIAYKTCPEGKNLCYKMMLASKKMVPVKRGCINVCPKNSALVKYVCCSTDRCN
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Mozambique cobra
Naja
sample
8644
Naja mossambica
3.45
64.39
pdbx_database_status
struct_conf
repository
Initial release
Version format compliance
Version format compliance
Derived calculations
Other
1
0
1991-07-15
1
1
2008-03-24
1
2
2011-07-13
1
3
2017-11-29
_pdbx_database_status.process_site
Y
BNL
1990-05-17
REL
PO4
PHOSPHATE ION
HOH
water
PO4
61
2
PO4
PO4
61
A
PO4
61
2
PO4
PO4
61
B
HOH
1
3
HOH
HOH
62
A
HOH
2
3
HOH
HOH
63
A
HOH
3
3
HOH
HOH
64
A
HOH
4
3
HOH
HOH
65
A
HOH
5
3
HOH
HOH
66
A
HOH
6
3
HOH
HOH
67
A
HOH
7
3
HOH
HOH
68
A
HOH
8
3
HOH
HOH
69
A
HOH
9
3
HOH
HOH
70
A
HOH
10
3
HOH
HOH
71
A
HOH
11
3
HOH
HOH
72
A
HOH
12
3
HOH
HOH
73
A
HOH
13
3
HOH
HOH
74
A
HOH
14
3
HOH
HOH
75
A
HOH
15
3
HOH
HOH
76
A
HOH
16
3
HOH
HOH
77
A
HOH
17
3
HOH
HOH
78
A
HOH
18
3
HOH
HOH
79
A
HOH
19
3
HOH
HOH
80
A
HOH
20
3
HOH
HOH
81
A
HOH
22
3
HOH
HOH
82
A
HOH
23
3
HOH
HOH
83
A
HOH
24
3
HOH
HOH
84
A
HOH
25
3
HOH
HOH
85
A
HOH
38
3
HOH
HOH
86
A
HOH
39
3
HOH
HOH
87
A
HOH
43
3
HOH
HOH
88
A
HOH
44
3
HOH
HOH
89
A
HOH
21
3
HOH
HOH
62
B
HOH
26
3
HOH
HOH
63
B
HOH
27
3
HOH
HOH
64
B
HOH
28
3
HOH
HOH
65
B
HOH
29
3
HOH
HOH
66
B
HOH
30
3
HOH
HOH
67
B
HOH
31
3
HOH
HOH
68
B
HOH
32
3
HOH
HOH
69
B
HOH
33
3
HOH
HOH
70
B
HOH
34
3
HOH
HOH
71
B
HOH
35
3
HOH
HOH
72
B
HOH
36
3
HOH
HOH
73
B
HOH
37
3
HOH
HOH
74
B
HOH
40
3
HOH
HOH
75
B
HOH
41
3
HOH
HOH
76
B
HOH
42
3
HOH
HOH
77
B
HOH
45
3
HOH
HOH
78
B
HOH
46
3
HOH
HOH
79
B
HOH
47
3
HOH
HOH
80
B
HOH
48
3
HOH
HOH
81
B
LEU
1
n
1
LEU
1
A
LYS
2
n
2
LYS
2
A
CYS
3
n
3
CYS
3
A
ASN
4
n
4
ASN
4
A
LYS
5
n
5
LYS
5
A
LEU
6
n
6
LEU
6
A
ILE
7
n
7
ILE
7
A
PRO
8
n
8
PRO
8
A
ILE
9
n
9
ILE
9
A
ALA
10
n
10
ALA
10
A
TYR
11
n
11
TYR
11
A
LYS
12
n
12
LYS
12
A
THR
13
n
13
THR
13
A
CYS
14
n
14
CYS
14
A
PRO
15
n
15
PRO
15
A
GLU
16
n
16
GLU
16
A
GLY
17
n
17
GLY
17
A
LYS
18
n
18
LYS
18
A
ASN
19
n
19
ASN
19
A
LEU
20
n
20
LEU
20
A
CYS
21
n
21
CYS
21
A
TYR
22
n
22
TYR
22
A
LYS
23
n
23
LYS
23
A
MET
24
n
24
MET
24
A
MET
25
n
25
MET
25
A
LEU
26
n
26
LEU
26
A
ALA
27
n
27
ALA
27
A
SER
28
n
28
SER
28
A
LYS
29
n
29
LYS
29
A
LYS
30
n
30
LYS
30
A
MET
31
n
31
MET
31
A
VAL
32
n
32
VAL
32
A
PRO
33
n
33
PRO
33
A
VAL
34
n
34
VAL
34
A
LYS
35
n
35
LYS
35
A
ARG
36
n
36
ARG
36
A
GLY
37
n
37
GLY
37
A
CYS
38
n
38
CYS
38
A
ILE
39
n
39
ILE
39
A
ASN
40
n
40
ASN
40
A
VAL
41
n
41
VAL
41
A
CYS
42
n
42
CYS
42
A
PRO
43
n
43
PRO
43
A
LYS
44
n
44
LYS
44
A
ASN
45
n
45
ASN
45
A
SER
46
n
46
SER
46
A
ALA
47
n
47
ALA
47
A
LEU
48
n
48
LEU
48
A
VAL
49
n
49
VAL
49
A
LYS
50
n
50
LYS
50
A
TYR
51
n
51
TYR
51
A
VAL
52
n
52
VAL
52
A
CYS
53
n
53
CYS
53
A
CYS
54
n
54
CYS
54
A
SER
55
n
55
SER
55
A
THR
56
n
56
THR
56
A
ASP
57
n
57
ASP
57
A
ARG
58
n
58
ARG
58
A
CYS
59
n
59
CYS
59
A
ASN
60
n
60
ASN
60
A
LEU
1
n
1
LEU
1
B
LYS
2
n
2
LYS
2
B
CYS
3
n
3
CYS
3
B
ASN
4
n
4
ASN
4
B
LYS
5
n
5
LYS
5
B
LEU
6
n
6
LEU
6
B
ILE
7
n
7
ILE
7
B
PRO
8
n
8
PRO
8
B
ILE
9
n
9
ILE
9
B
ALA
10
n
10
ALA
10
B
TYR
11
n
11
TYR
11
B
LYS
12
n
12
LYS
12
B
THR
13
n
13
THR
13
B
CYS
14
n
14
CYS
14
B
PRO
15
n
15
PRO
15
B
GLU
16
n
16
GLU
16
B
GLY
17
n
17
GLY
17
B
LYS
18
n
18
LYS
18
B
ASN
19
n
19
ASN
19
B
LEU
20
n
20
LEU
20
B
CYS
21
n
21
CYS
21
B
TYR
22
n
22
TYR
22
B
LYS
23
n
23
LYS
23
B
MET
24
n
24
MET
24
B
MET
25
n
25
MET
25
B
LEU
26
n
26
LEU
26
B
ALA
27
n
27
ALA
27
B
SER
28
n
28
SER
28
B
LYS
29
n
29
LYS
29
B
LYS
30
n
30
LYS
30
B
MET
31
n
31
MET
31
B
VAL
32
n
32
VAL
32
B
PRO
33
n
33
PRO
33
B
VAL
34
n
34
VAL
34
B
LYS
35
n
35
LYS
35
B
ARG
36
n
36
ARG
36
B
GLY
37
n
37
GLY
37
B
CYS
38
n
38
CYS
38
B
ILE
39
n
39
ILE
39
B
ASN
40
n
40
ASN
40
B
VAL
41
n
41
VAL
41
B
CYS
42
n
42
CYS
42
B
PRO
43
n
43
PRO
43
B
LYS
44
n
44
LYS
44
B
ASN
45
n
45
ASN
45
B
SER
46
n
46
SER
46
B
ALA
47
n
47
ALA
47
B
LEU
48
n
48
LEU
48
B
VAL
49
n
49
VAL
49
B
LYS
50
n
50
LYS
50
B
TYR
51
n
51
TYR
51
B
VAL
52
n
52
VAL
52
B
CYS
53
n
53
CYS
53
B
CYS
54
n
54
CYS
54
B
SER
55
n
55
SER
55
B
THR
56
n
56
THR
56
B
ASP
57
n
57
ASP
57
B
ARG
58
n
58
ARG
58
B
CYS
59
n
59
CYS
59
B
ASN
60
n
60
ASN
60
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
B
B
OG
O
SER
HOH
55
62
2.13
1
13.78
1.90
110.20
123.98
A
A
A
CB
CA
C
LEU
LEU
LEU
20
20
20
N
1
20.25
2.30
115.30
135.55
A
A
A
CA
CB
CG
LEU
LEU
LEU
20
20
20
N
1
17.54
2.50
121.70
139.24
A
A
A
C
N
CA
SER
LYS
LYS
28
29
29
Y
1
-16.81
2.70
111.00
94.19
B
B
B
N
CA
C
ILE
ILE
ILE
7
7
7
N
1
8.17
1.10
114.20
122.37
B
B
B
CA
CB
SG
CYS
CYS
CYS
21
21
21
N
1
14.04
1.40
123.60
137.64
B
B
B
CD
NE
CZ
ARG
ARG
ARG
58
58
58
N
1
A
B
CB
NZ
SER
LYS
46
35
2.07
1_555
6_555
1
A
PRO
15
-68.90
-174.00
1
A
LYS
18
-114.05
72.02
1
A
SER
28
-56.85
90.45
1
A
LYS
29
57.80
-53.17
1
A
MET
31
84.12
104.83
1
A
ASN
40
-69.24
-75.43
1
A
SER
55
-140.35
27.14
1
B
PRO
8
-75.45
25.38
1
B
SER
28
-44.66
71.86
1
B
LYS
29
108.25
-94.99
1
B
MET
31
-10.87
76.53
1
B
ASP
57
-27.52
106.13
SOLVENT OCCUPANCIES WERE REFINED WITHOUT SETTING AN UPPER BOUND. VALUES LARGE THAN 1.0 ARE INDICATIVE OF THE INTRINSIC INACCURACY OF THIS PARAMETER AND OF ITS LARGE CORRELATION WITH THE TEMPERATURE FACTOR.
0.197
2.5
5.0
4002
1
2.5
5.0
48
978
10
0
920
0.015
2.4
refinement
PROLSQ
CARDIOTOXIN V4/II (TOXIN III)
CARDIOTOXIN V4/II FROM NAJA MOSSAMBICA MOSSAMBICA: THE REFINED CRYSTAL STRUCTURE
1
N
N
1
N
N
2
N
N
2
N
N
3
N
N
3
N
N
disulf
2.043
A
CYS
3
A
SG
CYS
3
1_555
A
CYS
21
A
SG
CYS
21
1_555
disulf
2.062
A
CYS
14
A
SG
CYS
14
1_555
A
CYS
38
A
SG
CYS
38
1_555
disulf
2.053
A
CYS
42
A
SG
CYS
42
1_555
A
CYS
53
A
SG
CYS
53
1_555
disulf
2.031
A
CYS
54
A
SG
CYS
54
1_555
A
CYS
59
A
SG
CYS
59
1_555
disulf
2.013
B
CYS
3
B
SG
CYS
3
1_555
B
CYS
21
B
SG
CYS
21
1_555
disulf
2.029
B
CYS
14
B
SG
CYS
14
1_555
B
CYS
38
B
SG
CYS
38
1_555
disulf
2.036
B
CYS
42
B
SG
CYS
42
1_555
B
CYS
53
B
SG
CYS
53
1_555
disulf
2.043
B
CYS
54
B
SG
CYS
54
1_555
B
CYS
59
B
SG
CYS
59
1_555
CYTOTOXIN
CYTOTOXIN
CX4_NAJMO
UNP
1
1
P01452
LKCNKLIPIAYKTCPEGKNLCYKMMLASKKMVPVKRGCINVCPKNSALVKYVCCSTDRCN
1
60
1CDT
1
60
P01452
A
1
1
60
1
60
1CDT
1
60
P01452
B
1
1
60
2
3
2
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
LEU
1
A
LEU
1
A
LYS
5
A
LYS
5
A
ALA
10
A
ALA
10
A
CYS
14
A
CYS
14
A
LEU
48
A
LEU
48
A
CYS
54
A
CYS
54
A
LEU
20
A
LEU
20
A
ALA
27
A
ALA
27
A
VAL
32
A
VAL
32
A
ILE
39
A
ILE
39
B
LEU
1
B
LEU
1
B
LYS
5
B
LYS
5
B
ALA
10
B
ALA
10
B
CYS
14
B
CYS
14
B
LEU
48
B
LEU
48
B
CYS
54
B
CYS
54
B
LEU
20
B
LEU
20
B
ALA
27
B
ALA
27
B
VAL
32
B
VAL
32
B
ILE
39
B
ILE
39
BINDING SITE FOR RESIDUE PO4 A 61
Software
5
BINDING SITE FOR RESIDUE PO4 B 61
Software
4
A
LYS
12
A
LYS
12
5
1_555
A
TYR
22
A
TYR
22
5
1_555
A
ARG
36
A
ARG
36
5
1_555
A
GLY
37
A
GLY
37
5
1_555
A
CYS
38
A
CYS
38
5
1_555
B
LYS
12
B
LYS
12
4
1_555
B
TYR
22
B
TYR
22
4
1_555
B
CYS
38
B
CYS
38
4
1_555
B
HOH
68
F
HOH
4
1_555
169
P 61