0.016451 0.000000 0.005428 0.000000 0.017217 0.000000 0.000000 0.000000 0.014103 0.00000 0.00000 0.00000 Tormo, J. Jones, E.Y. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 108.26 90.00 60.787 58.082 74.666 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N H N 160 N H N 161 N N N 162 S C N 163 N C N 164 N O N 165 S C N 166 N C N 167 N C N 168 N C N 169 N O N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N N N 184 S C N 185 N C N 186 N O N 187 N C N 188 N C N 189 N C N 190 N C N 191 N O N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N N N 206 S C N 207 N C N 208 N O N 209 N C N 210 N C N 211 N C N 212 N C N 213 N N N 214 N O N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N N N 231 S C N 232 N C N 233 N O N 234 N C N 235 N C N 236 N S N 237 N C N 238 N O N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N N N 251 S C N 252 N C N 253 N O N 254 N C Y 255 N C Y 256 N C Y 257 N C Y 258 N C Y 259 N C Y 260 N C N 261 N O N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N H N 272 N H N 273 N N N 274 S C N 275 N C N 276 N O N 277 N C N 278 N C N 279 N C N 280 N O N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N N N 291 S C N 292 N C N 293 N O N 294 N C N 295 N O N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N S N 305 N O N 306 N O N 307 N O N 308 N O N 309 N N N 310 S C N 311 N C N 312 N O N 313 R C N 314 N O N 315 N C N 316 N O N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C Y 331 N C Y 332 N C Y 333 N C Y 334 N N Y 335 N C Y 336 N C Y 337 N C Y 338 N C Y 339 N C N 340 N O N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N N N 354 S C N 355 N C N 356 N O N 357 N C Y 358 N C Y 359 N C Y 360 N C Y 361 N C Y 362 N C Y 363 N C N 364 N O N 365 N O N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N H N 375 N H N 376 N H N 377 N N N 378 S C N 379 N C N 380 N O N 381 N C N 382 N C N 383 N C N 384 N O N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N doub N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N doub N 244 N sing N 245 N sing N 246 N sing N 247 N sing Y 248 N doub Y 249 N sing Y 250 N sing N 251 N sing Y 252 N doub N 253 N sing Y 254 N doub N 255 N sing Y 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N doub N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N doub N 291 N doub N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N doub N 317 N sing N 318 N sing N 319 N sing N 320 N sing Y 321 N doub Y 322 N sing Y 323 N sing N 324 N sing Y 325 N doub Y 326 N sing Y 327 N sing N 328 N sing Y 329 N sing Y 330 N doub N 331 N sing Y 332 N doub N 333 N sing Y 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N doub N 345 N sing N 346 N sing N 347 N sing N 348 N sing Y 349 N doub Y 350 N sing Y 351 N sing N 352 N sing Y 353 N doub N 354 N sing Y 355 N doub N 356 N sing Y 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N doub N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing US Immunity IUNIEH 2048 1074-7613 10 63 74 10.1016/S1074-7613(00)80007-2 10023771 Crystal structures of two H-2Db/glycopeptide complexes suggest a molecular basis for CTL cross-reactivity. 1999 10.2210/pdb1ce6/pdb pdb_00001ce6 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 100 1 IMAGE PLATE MARRESEARCH SINGLE WAVELENGTH M x-ray 1 1.000 1.0 PX7.2 SRS 1.000 SYNCHROTRON SRS BEAMLINE PX7.2 31861.475 PROTEIN (MHC CLASS I H-2DB HEAVY CHAIN) FRAGMENT: EXTRACELLULAR DOMAINS 1 man polymer 12855.403 PROTEIN (HUMAN BETA-2 MICROGLOBULIN) 1 man polymer 949.060 PROTEIN (SENDAI VIRUS NUCLEOPROTEIN) FRAGMENT: RESIDUES 324-332 1 syn polymer 96.063 SULFATE ION 1 syn non-polymer 18.015 water 25 nat water no no GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRN LLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYL EGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGT FQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRW GPHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAENPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRN LLGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGRDYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYL EGECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGT FQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRW A polypeptide(L) no no GPHSMRYFEIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFT PTEKDEYACRVNHVTLSQPKIVKWDRDM GPHSMRYFEIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFT PTEKDEYACRVNHVTLSQPKIVKWDRDM B polypeptide(L) no no FAPGNYPAL FAPGNYPAL C polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus Chinese hamster Cricetulus sample 10090 Mus musculus CHO K1 CELLS 10029 Cricetulus griseus human Homo Chinese hamster Cricetulus sample 9606 Homo sapiens CHO K1 CELLS 10029 Cricetulus griseus 1 2.8 55 5.0 pH 5.0 chem_comp_atom chem_comp_bond database_2 pdbx_initial_refinement_model struct_site repository Initial release Version format compliance Version format compliance Database references Data collection Database references Derived calculations Refinement description 1 0 1999-03-26 1 1 2008-04-26 1 2 2011-07-13 1 3 2011-12-07 1 4 2023-08-09 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id BNL Y RCSB 1999-03-17 REL SO4 SULFATE ION HOH water SEQUENCE FROM SENDAI VIRUS sample 1HOC PDB ENTRIES 1HOC AND 3HLA PDB experimental model 3HLA PDB ENTRIES 1HOC AND 3HLA PDB experimental model SO4 990 4 SO4 SO4 990 A HOH 5 5 HOH HOH 991 A HOH 7 5 HOH HOH 992 A HOH 9 5 HOH HOH 993 A HOH 10 5 HOH HOH 994 A HOH 14 5 HOH HOH 995 A HOH 15 5 HOH HOH 996 A HOH 17 5 HOH HOH 997 A HOH 19 5 HOH HOH 998 A HOH 20 5 HOH HOH 999 A HOH 23 5 HOH HOH 1000 A HOH 1 5 HOH HOH 100 B HOH 2 5 HOH HOH 101 B HOH 3 5 HOH HOH 102 B HOH 4 5 HOH HOH 103 B HOH 6 5 HOH HOH 104 B HOH 8 5 HOH HOH 105 B HOH 11 5 HOH HOH 106 B HOH 12 5 HOH HOH 107 B HOH 13 5 HOH HOH 108 B HOH 16 5 HOH HOH 109 B HOH 18 5 HOH HOH 110 B HOH 21 5 HOH HOH 111 B HOH 22 5 HOH HOH 112 B HOH 24 5 HOH HOH 113 B HOH 25 5 HOH HOH 114 B GLY 1 n 1 GLY 1 A PRO 2 n 2 PRO 2 A HIS 3 n 3 HIS 3 A SER 4 n 4 SER 4 A MET 5 n 5 MET 5 A ARG 6 n 6 ARG 6 A TYR 7 n 7 TYR 7 A PHE 8 n 8 PHE 8 A GLU 9 n 9 GLU 9 A THR 10 n 10 THR 10 A ALA 11 n 11 ALA 11 A VAL 12 n 12 VAL 12 A SER 13 n 13 SER 13 A ARG 14 n 14 ARG 14 A PRO 15 n 15 PRO 15 A GLY 16 n 16 GLY 16 A LEU 17 n 17 LEU 17 A GLU 18 n 18 GLU 18 A GLU 19 n 19 GLU 19 A PRO 20 n 20 PRO 20 A ARG 21 n 21 ARG 21 A TYR 22 n 22 TYR 22 A ILE 23 n 23 ILE 23 A SER 24 n 24 SER 24 A VAL 25 n 25 VAL 25 A GLY 26 n 26 GLY 26 A TYR 27 n 27 TYR 27 A VAL 28 n 28 VAL 28 A ASP 29 n 29 ASP 29 A ASN 30 n 30 ASN 30 A LYS 31 n 31 LYS 31 A GLU 32 n 32 GLU 32 A PHE 33 n 33 PHE 33 A VAL 34 n 34 VAL 34 A ARG 35 n 35 ARG 35 A PHE 36 n 36 PHE 36 A ASP 37 n 37 ASP 37 A SER 38 n 38 SER 38 A ASP 39 n 39 ASP 39 A ALA 40 n 40 ALA 40 A GLU 41 n 41 GLU 41 A ASN 42 n 42 ASN 42 A PRO 43 n 43 PRO 43 A ARG 44 n 44 ARG 44 A TYR 45 n 45 TYR 45 A GLU 46 n 46 GLU 46 A PRO 47 n 47 PRO 47 A ARG 48 n 48 ARG 48 A ALA 49 n 49 ALA 49 A PRO 50 n 50 PRO 50 A TRP 51 n 51 TRP 51 A MET 52 n 52 MET 52 A GLU 53 n 53 GLU 53 A GLN 54 n 54 GLN 54 A GLU 55 n 55 GLU 55 A GLY 56 n 56 GLY 56 A PRO 57 n 57 PRO 57 A GLU 58 n 58 GLU 58 A TYR 59 n 59 TYR 59 A TRP 60 n 60 TRP 60 A GLU 61 n 61 GLU 61 A ARG 62 n 62 ARG 62 A GLU 63 n 63 GLU 63 A THR 64 n 64 THR 64 A GLN 65 n 65 GLN 65 A LYS 66 n 66 LYS 66 A ALA 67 n 67 ALA 67 A LYS 68 n 68 LYS 68 A GLY 69 n 69 GLY 69 A GLN 70 n 70 GLN 70 A GLU 71 n 71 GLU 71 A GLN 72 n 72 GLN 72 A TRP 73 n 73 TRP 73 A PHE 74 n 74 PHE 74 A ARG 75 n 75 ARG 75 A VAL 76 n 76 VAL 76 A SER 77 n 77 SER 77 A LEU 78 n 78 LEU 78 A ARG 79 n 79 ARG 79 A ASN 80 n 80 ASN 80 A LEU 81 n 81 LEU 81 A LEU 82 n 82 LEU 82 A GLY 83 n 83 GLY 83 A TYR 84 n 84 TYR 84 A TYR 85 n 85 TYR 85 A ASN 86 n 86 ASN 86 A GLN 87 n 87 GLN 87 A SER 88 n 88 SER 88 A ALA 89 n 89 ALA 89 A GLY 90 n 90 GLY 90 A GLY 91 n 91 GLY 91 A SER 92 n 92 SER 92 A HIS 93 n 93 HIS 93 A THR 94 n 94 THR 94 A LEU 95 n 95 LEU 95 A GLN 96 n 96 GLN 96 A GLN 97 n 97 GLN 97 A MET 98 n 98 MET 98 A SER 99 n 99 SER 99 A GLY 100 n 100 GLY 100 A CYS 101 n 101 CYS 101 A ASP 102 n 102 ASP 102 A LEU 103 n 103 LEU 103 A GLY 104 n 104 GLY 104 A SER 105 n 105 SER 105 A ASP 106 n 106 ASP 106 A TRP 107 n 107 TRP 107 A ARG 108 n 108 ARG 108 A LEU 109 n 109 LEU 109 A LEU 110 n 110 LEU 110 A ARG 111 n 111 ARG 111 A GLY 112 n 112 GLY 112 A TYR 113 n 113 TYR 113 A LEU 114 n 114 LEU 114 A GLN 115 n 115 GLN 115 A PHE 116 n 116 PHE 116 A ALA 117 n 117 ALA 117 A TYR 118 n 118 TYR 118 A GLU 119 n 119 GLU 119 A GLY 120 n 120 GLY 120 A ARG 121 n 121 ARG 121 A ASP 122 n 122 ASP 122 A TYR 123 n 123 TYR 123 A ILE 124 n 124 ILE 124 A ALA 125 n 125 ALA 125 A LEU 126 n 126 LEU 126 A ASN 127 n 127 ASN 127 A GLU 128 n 128 GLU 128 A ASP 129 n 129 ASP 129 A LEU 130 n 130 LEU 130 A LYS 131 n 131 LYS 131 A THR 132 n 132 THR 132 A TRP 133 n 133 TRP 133 A THR 134 n 134 THR 134 A ALA 135 n 135 ALA 135 A ALA 136 n 136 ALA 136 A ASP 137 n 137 ASP 137 A MET 138 n 138 MET 138 A ALA 139 n 139 ALA 139 A ALA 140 n 140 ALA 140 A GLN 141 n 141 GLN 141 A ILE 142 n 142 ILE 142 A THR 143 n 143 THR 143 A ARG 144 n 144 ARG 144 A ARG 145 n 145 ARG 145 A LYS 146 n 146 LYS 146 A TRP 147 n 147 TRP 147 A GLU 148 n 148 GLU 148 A GLN 149 n 149 GLN 149 A SER 150 n 150 SER 150 A GLY 151 n 151 GLY 151 A ALA 152 n 152 ALA 152 A ALA 153 n 153 ALA 153 A GLU 154 n 154 GLU 154 A HIS 155 n 155 HIS 155 A TYR 156 n 156 TYR 156 A LYS 157 n 157 LYS 157 A ALA 158 n 158 ALA 158 A TYR 159 n 159 TYR 159 A LEU 160 n 160 LEU 160 A GLU 161 n 161 GLU 161 A GLY 162 n 162 GLY 162 A GLU 163 n 163 GLU 163 A CYS 164 n 164 CYS 164 A VAL 165 n 165 VAL 165 A GLU 166 n 166 GLU 166 A TRP 167 n 167 TRP 167 A LEU 168 n 168 LEU 168 A HIS 169 n 169 HIS 169 A ARG 170 n 170 ARG 170 A TYR 171 n 171 TYR 171 A LEU 172 n 172 LEU 172 A LYS 173 n 173 LYS 173 A ASN 174 n 174 ASN 174 A GLY 175 n 175 GLY 175 A ASN 176 n 176 ASN 176 A ALA 177 n 177 ALA 177 A THR 178 n 178 THR 178 A LEU 179 n 179 LEU 179 A LEU 180 n 180 LEU 180 A ARG 181 n 181 ARG 181 A THR 182 n 182 THR 182 A ASP 183 n 183 ASP 183 A SER 184 n 184 SER 184 A PRO 185 n 185 PRO 185 A LYS 186 n 186 LYS 186 A ALA 187 n 187 ALA 187 A HIS 188 n 188 HIS 188 A VAL 189 n 189 VAL 189 A THR 190 n 190 THR 190 A HIS 191 n 191 HIS 191 A HIS 192 n 192 HIS 192 A PRO 193 n 193 PRO 193 A ARG 194 n 194 ARG 194 A SER 195 n 195 SER 195 A LYS 196 n 196 LYS 196 A GLY 197 n 197 GLY 197 A GLU 198 n 198 GLU 198 A VAL 199 n 199 VAL 199 A THR 200 n 200 THR 200 A LEU 201 n 201 LEU 201 A ARG 202 n 202 ARG 202 A CYS 203 n 203 CYS 203 A TRP 204 n 204 TRP 204 A ALA 205 n 205 ALA 205 A LEU 206 n 206 LEU 206 A GLY 207 n 207 GLY 207 A PHE 208 n 208 PHE 208 A TYR 209 n 209 TYR 209 A PRO 210 n 210 PRO 210 A ALA 211 n 211 ALA 211 A ASP 212 n 212 ASP 212 A ILE 213 n 213 ILE 213 A THR 214 n 214 THR 214 A LEU 215 n 215 LEU 215 A THR 216 n 216 THR 216 A TRP 217 n 217 TRP 217 A GLN 218 n 218 GLN 218 A LEU 219 n 219 LEU 219 A ASN 220 n 220 ASN 220 A GLY 221 n 221 GLY 221 A GLU 222 n 222 GLU 222 A GLU 223 n 223 GLU 223 A LEU 224 n 224 LEU 224 A THR 225 n 225 THR 225 A GLN 226 n 226 GLN 226 A ASP 227 n 227 ASP 227 A MET 228 n 228 MET 228 A GLU 229 n 229 GLU 229 A LEU 230 n 230 LEU 230 A VAL 231 n 231 VAL 231 A GLU 232 n 232 GLU 232 A THR 233 n 233 THR 233 A ARG 234 n 234 ARG 234 A PRO 235 n 235 PRO 235 A ALA 236 n 236 ALA 236 A GLY 237 n 237 GLY 237 A ASP 238 n 238 ASP 238 A GLY 239 n 239 GLY 239 A THR 240 n 240 THR 240 A PHE 241 n 241 PHE 241 A GLN 242 n 242 GLN 242 A LYS 243 n 243 LYS 243 A TRP 244 n 244 TRP 244 A ALA 245 n 245 ALA 245 A SER 246 n 246 SER 246 A VAL 247 n 247 VAL 247 A VAL 248 n 248 VAL 248 A VAL 249 n 249 VAL 249 A PRO 250 n 250 PRO 250 A LEU 251 n 251 LEU 251 A GLY 252 n 252 GLY 252 A LYS 253 n 253 LYS 253 A GLU 254 n 254 GLU 254 A GLN 255 n 255 GLN 255 A ASN 256 n 256 ASN 256 A TYR 257 n 257 TYR 257 A THR 258 n 258 THR 258 A CYS 259 n 259 CYS 259 A ARG 260 n 260 ARG 260 A VAL 261 n 261 VAL 261 A TYR 262 n 262 TYR 262 A HIS 263 n 263 HIS 263 A GLU 264 n 264 GLU 264 A GLY 265 n 265 GLY 265 A LEU 266 n 266 LEU 266 A PRO 267 n 267 PRO 267 A GLU 268 n 268 GLU 268 A PRO 269 n 269 PRO 269 A LEU 270 n 270 LEU 270 A THR 271 n 271 THR 271 A LEU 272 n 272 LEU 272 A ARG 273 n 273 ARG 273 A TRP 274 n 274 TRP 274 A n 1 -8 B n 2 -7 B n 3 -6 B n 4 -5 B n 5 -4 B n 6 -3 B n 7 -2 B n 8 -1 B n 9 0 B ILE 1 n 10 ILE 1 B GLN 2 n 11 GLN 2 B ARG 3 n 12 ARG 3 B THR 4 n 13 THR 4 B PRO 5 n 14 PRO 5 B LYS 6 n 15 LYS 6 B ILE 7 n 16 ILE 7 B GLN 8 n 17 GLN 8 B VAL 9 n 18 VAL 9 B TYR 10 n 19 TYR 10 B SER 11 n 20 SER 11 B ARG 12 n 21 ARG 12 B HIS 13 n 22 HIS 13 B PRO 14 n 23 PRO 14 B ALA 15 n 24 ALA 15 B GLU 16 n 25 GLU 16 B ASN 17 n 26 ASN 17 B GLY 18 n 27 GLY 18 B LYS 19 n 28 LYS 19 B SER 20 n 29 SER 20 B ASN 21 n 30 ASN 21 B PHE 22 n 31 PHE 22 B LEU 23 n 32 LEU 23 B ASN 24 n 33 ASN 24 B CYS 25 n 34 CYS 25 B TYR 26 n 35 TYR 26 B VAL 27 n 36 VAL 27 B SER 28 n 37 SER 28 B GLY 29 n 38 GLY 29 B PHE 30 n 39 PHE 30 B HIS 31 n 40 HIS 31 B PRO 32 n 41 PRO 32 B SER 33 n 42 SER 33 B ASP 34 n 43 ASP 34 B ILE 35 n 44 ILE 35 B GLU 36 n 45 GLU 36 B VAL 37 n 46 VAL 37 B ASP 38 n 47 ASP 38 B LEU 39 n 48 LEU 39 B LEU 40 n 49 LEU 40 B LYS 41 n 50 LYS 41 B ASN 42 n 51 ASN 42 B GLY 43 n 52 GLY 43 B GLU 44 n 53 GLU 44 B ARG 45 n 54 ARG 45 B ILE 46 n 55 ILE 46 B GLU 47 n 56 GLU 47 B LYS 48 n 57 LYS 48 B VAL 49 n 58 VAL 49 B GLU 50 n 59 GLU 50 B HIS 51 n 60 HIS 51 B SER 52 n 61 SER 52 B ASP 53 n 62 ASP 53 B LEU 54 n 63 LEU 54 B SER 55 n 64 SER 55 B PHE 56 n 65 PHE 56 B SER 57 n 66 SER 57 B LYS 58 n 67 LYS 58 B ASP 59 n 68 ASP 59 B TRP 60 n 69 TRP 60 B SER 61 n 70 SER 61 B PHE 62 n 71 PHE 62 B TYR 63 n 72 TYR 63 B LEU 64 n 73 LEU 64 B LEU 65 n 74 LEU 65 B TYR 66 n 75 TYR 66 B TYR 67 n 76 TYR 67 B THR 68 n 77 THR 68 B GLU 69 n 78 GLU 69 B PHE 70 n 79 PHE 70 B THR 71 n 80 THR 71 B PRO 72 n 81 PRO 72 B THR 73 n 82 THR 73 B GLU 74 n 83 GLU 74 B LYS 75 n 84 LYS 75 B ASP 76 n 85 ASP 76 B GLU 77 n 86 GLU 77 B TYR 78 n 87 TYR 78 B ALA 79 n 88 ALA 79 B CYS 80 n 89 CYS 80 B ARG 81 n 90 ARG 81 B VAL 82 n 91 VAL 82 B ASN 83 n 92 ASN 83 B HIS 84 n 93 HIS 84 B VAL 85 n 94 VAL 85 B THR 86 n 95 THR 86 B LEU 87 n 96 LEU 87 B SER 88 n 97 SER 88 B GLN 89 n 98 GLN 89 B PRO 90 n 99 PRO 90 B LYS 91 n 100 LYS 91 B ILE 92 n 101 ILE 92 B VAL 93 n 102 VAL 93 B LYS 94 n 103 LYS 94 B TRP 95 n 104 TRP 95 B ASP 96 n 105 ASP 96 B ARG 97 n 106 ARG 97 B ASP 98 n 107 ASP 98 B MET 99 n 108 MET 99 B PHE 1 n 1 PHE 1 C ALA 2 n 2 ALA 2 C PRO 3 n 3 PRO 3 C GLY 4 n 4 GLY 4 C ASN 5 n 5 ASN 5 C TYR 6 n 6 TYR 6 C PRO 7 n 7 PRO 7 C ALA 8 n 8 ALA 8 C LEU 9 n 9 LEU 9 C author_and_software_defined_assembly PISA 3 trimeric 4340 -29 18870 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O PHE 33 A O PHE 33 A N GLY 26 A N GLY 26 A O ARG 21 A O ARG 21 A N VAL 12 A N VAL 12 A O HIS 3 A O HIS 3 A N LEU 103 A N LEU 103 A O GLN 96 A O GLN 96 A N ALA 117 A N ALA 117 A O PHE 116 A O PHE 116 A N ILE 124 A N ILE 124 A O ALA 125 A O ALA 125 A N THR 134 A N THR 134 A O LYS 186 A O LYS 186 A N LEU 206 A N LEU 206 A O VAL 199 A O VAL 199 A N VAL 249 A N VAL 249 A O THR 214 A O THR 214 A N TYR 262 A N TYR 262 A O CYS 259 A O CYS 259 A N LEU 272 A N LEU 272 B O LYS 6 B O LYS 15 B N SER 28 B N SER 37 B O ASN 21 B O ASN 30 B N PHE 70 B N PHE 79 B O GLU 36 B O GLU 45 B N ASN 83 B N ASN 92 B O CYS 80 B O CYS 89 B N VAL 93 B N VAL 102 1 B GLY -8 B GLY 1 1 Y 1 B PRO -7 B PRO 2 1 Y 1 B HIS -6 B HIS 3 1 Y 1 B SER -5 B SER 4 1 Y 1 B MET -4 B MET 5 1 Y 1 B ARG -3 B ARG 6 1 Y 1 B TYR -2 B TYR 7 1 Y 1 B PHE -1 B PHE 8 1 Y 1 B GLU 0 B GLU 9 1 Y 1 7.24 1.10 114.20 121.44 A A A CA CB SG CYS CYS CYS 203 203 203 N 1 A ARG 44 -177.87 146.29 1 A ASN 86 32.43 45.57 1 A SER 88 -76.90 -124.69 1 A LEU 110 -121.51 -56.30 1 A LYS 131 -134.29 -36.96 1 A LEU 180 -72.92 21.65 1 A SER 195 -110.54 -147.61 1 A ASN 220 16.38 47.02 1 A GLU 222 -45.87 157.56 1 A ASP 227 38.53 61.71 1 A LEU 251 -38.67 145.23 1 A GLU 254 -144.08 -41.74 1 A GLN 255 -69.53 0.79 1 A GLU 264 -42.30 -71.87 1 A GLU 268 -170.91 140.21 1 A PRO 269 -35.71 117.17 1 B ASN 17 -39.44 136.10 1 B HIS 31 -176.91 131.62 1 B ASP 34 -48.59 102.40 1 B GLU 47 -49.99 -88.63 1 B SER 52 -57.45 170.14 1 B LEU 54 137.30 136.65 1 B TRP 60 74.23 -8.76 1 B ASP 98 -70.89 28.00 PROTEIN_REP.PARAM PROTEIN.TOP WATER_REP.PARAM WATER.TOP ION.PARAM ION.TOP 43.2 -16.9 0.00 6.31 -15.8 0.00 32.78 0.274 0.008 0.217 2.90 10.00 1070 10527 10527 10.2 97.1 RANDOM 1 RESTRAINED THROUGHOUT 0.0 MOLECULAR REPLACEMENT PDB ENTRIES 1HOC AND 3HLA FLAT MODEL 36.00 0.400 0.47 0.36 5.00 0.67 0.59 2.90 10.00 25 3176 5 0 3146 0.008 1.4 24.7 0.85 1.65 1.50 2.87 2.00 2.17 2.00 3.43 2.50 0.372 0.028 0.341 3.08 176 1479 6 10.6 92.7 48.9 2.85 15.0 1CE6 11481 0.096 1 10 2.6 96.1 2.85 2.92 2.6 0.376 1 2.2 86.2 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement CNS 0.4 MHC CLASS I H-2DB COMPLEXED WITH A SENDAI VIRUS NUCLEOPROTEIN PEPTIDE 1 N N 2 N N 3 N N 4 N N 5 N N 5 N N A PRO 50 A PRO 50 HELX_P A MET 52 A MET 52 5 1 3 A PRO 57 A PRO 57 HELX_P A TYR 84 A TYR 84 1 2 28 A MET 138 A MET 138 HELX_P A SER 150 A SER 150 1 3 13 A ALA 152 A ALA 152 HELX_P A GLU 161 A GLU 161 1 4 10 A GLU 163 A GLU 163 HELX_P A ASN 174 A ASN 174 1 5 12 A ASN 176 A ASN 176 HELX_P A LEU 179 A LEU 179 1 6 4 disulf 2.037 A CYS 101 A SG CYS 101 1_555 A CYS 164 A SG CYS 164 1_555 disulf 2.029 A CYS 203 A SG CYS 203 1_555 A CYS 259 A SG CYS 259 1_555 disulf 2.032 B CYS 25 B SG CYS 34 1_555 B CYS 80 B SG CYS 89 1_555 MHC CLASS I MHC CLASS I, ANTIGEN PRESENTATION, VIRAL PEPTIDE, COMPLEX A TYR 209 A TYR 209 1 A PRO 210 A PRO 210 -0.03 B HIS 31 B HIS 40 1 B PRO 32 B PRO 41 -0.78 HA11_MOUSE UNP 1 P01899 B2MG_HUMAN UNP 2 P61769 NCAP_SENDZ UNP 3 P04858 25 298 1CE6 1 274 P01899 A 1 1 274 21 119 1CE6 1 99 P61769 B 2 10 108 324 332 1CE6 1 9 P04858 C 3 1 9 7 3 3 3 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A GLU 32 A GLU 32 A ASP 37 A ASP 37 A ARG 21 A ARG 21 A VAL 28 A VAL 28 A HIS 3 A HIS 3 A VAL 12 A VAL 12 A THR 94 A THR 94 A LEU 103 A LEU 103 A LEU 109 A LEU 109 A TYR 118 A TYR 118 A ARG 121 A ARG 121 A LEU 126 A LEU 126 A TRP 133 A TRP 133 A ALA 135 A ALA 135 A LYS 186 A LYS 186 A PRO 193 A PRO 193 A GLU 198 A GLU 198 A LEU 206 A LEU 206 A LYS 243 A LYS 243 A PRO 250 A PRO 250 A THR 214 A THR 214 A LEU 219 A LEU 219 A TYR 257 A TYR 257 A TYR 262 A TYR 262 A LEU 270 A LEU 270 A LEU 272 A LEU 272 B LYS 6 B LYS 15 B SER 11 B SER 20 B SER 20 B SER 29 B SER 28 B SER 37 B TYR 66 B TYR 75 B THR 71 B THR 80 B ILE 35 B ILE 44 B LYS 41 B LYS 50 B TYR 78 B TYR 87 B HIS 84 B HIS 93 B LYS 91 B LYS 100 B LYS 94 B LYS 103 BINDING SITE FOR RESIDUE SO4 A 990 A SO4 990 Software 2 A ARG 121 A ARG 121 2 1_555 B ILE 1 B ILE 10 2 1_555 4 monoclinic P 1 21 1