0.009872 0.005699 0.000000 0.000000 0.011399 0.000000 0.000000 0.000000 0.013605 0.00000 0.00000 0.00000 Zheng, N. Fraenkel, E. Pabo, C.O. Pavletich, N.P. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 101.300 101.300 73.500 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N O N 89 N P N 90 N O N 91 N O N 92 N O N 93 N C N 94 R C N 95 N O N 96 S C N 97 N O N 98 N C N 99 R C Y 100 N N Y 101 N C Y 102 N N Y 103 N C Y 104 N C N 105 N N Y 106 N N Y 107 N C Y 108 N N Y 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N O N 125 N P N 126 N O N 127 N O N 128 N O N 129 N C N 130 R C N 131 N O N 132 S C N 133 N O N 134 N C N 135 R C N 136 N N N 137 N C N 138 N O N 139 N N N 140 N C N 141 N N N 142 N C N 143 N C N 144 N H N 145 N H N 146 N H N 147 N H N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N O N 159 N P N 160 N O N 161 N O N 162 N O N 163 N C N 164 R C N 165 N O N 166 S C N 167 N O N 168 N C N 169 R C Y 170 N N Y 171 N C Y 172 N N Y 173 N C N 174 N C N 175 N O N 176 N N N 177 N C N 178 N N N 179 N N Y 180 N C N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N O N 196 N P N 197 N O N 198 N O N 199 N O N 200 N C N 201 R C N 202 N O N 203 S C N 204 N O N 205 N C N 206 R C N 207 N N N 208 N C N 209 N O N 210 N N N 211 N C N 212 N O N 213 N C N 214 N C N 215 N C N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N N N 232 S C N 233 N C N 234 N O N 235 N C N 236 N C N 237 N C N 238 N O N 239 N N N 240 N O N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N C N 258 N O N 259 N O N 260 N O N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 N C N 272 N C N 273 N O N 274 N O N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N N N 281 S C N 282 N C N 283 N O N 284 N C Y 285 N C Y 286 N N Y 287 N C Y 288 N C Y 289 N N N 290 N O N 291 N H N 292 N H N 293 N H N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N O N 302 N H N 303 N H N 304 N N N 305 S C N 306 N C N 307 N O N 308 S C N 309 N C N 310 N C N 311 N C N 312 N O N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N N N 327 S C N 328 N C N 329 N O N 330 N C N 331 N C N 332 N C N 333 N C N 334 N O N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N H N 348 N N N 349 S C N 350 N C N 351 N O N 352 N C N 353 N C N 354 N C N 355 N C N 356 N N N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C N 378 N C N 379 N S N 380 N C N 381 N O N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N N N 394 S C N 395 N C N 396 N O N 397 N C Y 398 N C Y 399 N C Y 400 N C Y 401 N C Y 402 N C Y 403 N C N 404 N O N 405 N H N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N N N 417 S C N 418 N C N 419 N O N 420 N C N 421 N C N 422 N C N 423 N O N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N H N 432 N H N 433 N N N 434 S C N 435 N C N 436 N O N 437 N C N 438 N O N 439 N O N 440 N H N 441 N H N 442 N H N 443 N H N 444 N H N 445 N H N 446 N H N 447 N N N 448 S C N 449 N C N 450 N O N 451 R C N 452 N O N 453 N C N 454 N O N 455 N H N 456 N H N 457 N H N 458 N H N 459 N H N 460 N H N 461 N H N 462 N H N 463 N H N 464 N N N 465 S C N 466 N C N 467 N O N 468 N C Y 469 N C Y 470 N C Y 471 N C Y 472 N N Y 473 N C Y 474 N C Y 475 N C Y 476 N C Y 477 N C N 478 N O N 479 N H N 480 N H N 481 N H N 482 N H N 483 N H N 484 N H N 485 N H N 486 N H N 487 N H N 488 N H N 489 N H N 490 N H N 491 N N N 492 S C N 493 N C N 494 N O N 495 N C Y 496 N C Y 497 N C Y 498 N C Y 499 N C Y 500 N C Y 501 N C N 502 N O N 503 N O N 504 N H N 505 N H N 506 N H N 507 N H N 508 N H N 509 N H N 510 N H N 511 N H N 512 N H N 513 N H N 514 N H N 515 N N N 516 S C N 517 N C N 518 N O N 519 N C N 520 N C N 521 N C N 522 N O N 523 N H N 524 N H N 525 N H N 526 N H N 527 N H N 528 N H N 529 N H N 530 N H N 531 N H N 532 N H N 533 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N doub N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing Y 106 N sing Y 107 N sing Y 108 N doub N 109 N sing Y 110 N sing Y 111 N sing Y 112 N doub N 113 N sing Y 114 N doub N 115 N sing N 116 N sing Y 117 N sing Y 118 N doub N 119 N sing Y 120 N sing N 121 N sing N 122 N sing N 123 N doub N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N doub N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N doub N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing Y 179 N sing Y 180 N sing Y 181 N doub N 182 N sing Y 183 N sing N 184 N sing Y 185 N doub N 186 N doub N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N doub N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N doub N 225 N sing N 226 N sing N 227 N doub N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N doub N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N doub N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N doub N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N doub N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N doub N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N doub N 285 N sing N 286 N sing N 287 N sing N 288 N sing Y 289 N sing Y 290 N doub Y 291 N doub N 292 N sing Y 293 N sing N 294 N sing Y 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N doub N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N sing N 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N doub N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N doub N 393 N sing N 394 N sing N 395 N sing N 396 N sing Y 397 N doub Y 398 N sing Y 399 N sing N 400 N sing Y 401 N doub N 402 N sing Y 403 N doub N 404 N sing Y 405 N sing N 406 N sing N 407 N sing N 408 N sing N 409 N sing N 410 N sing N 411 N sing N 412 N sing N 413 N sing N 414 N sing N 415 N doub N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N sing N 424 N sing N 425 N sing N 426 N sing N 427 N sing N 428 N sing N 429 N sing N 430 N sing N 431 N sing N 432 N doub N 433 N sing N 434 N sing N 435 N sing N 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N doub N 446 N sing N 447 N sing N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing N 459 N sing N 460 N sing N 461 N doub N 462 N sing N 463 N sing N 464 N sing N 465 N sing Y 466 N doub Y 467 N sing Y 468 N sing N 469 N sing Y 470 N doub Y 471 N sing Y 472 N sing N 473 N sing Y 474 N sing Y 475 N doub N 476 N sing Y 477 N doub N 478 N sing Y 479 N sing N 480 N sing N 481 N sing N 482 N sing N 483 N sing N 484 N sing N 485 N sing N 486 N sing N 487 N sing N 488 N sing N 489 N doub N 490 N sing N 491 N sing N 492 N sing N 493 N sing Y 494 N doub Y 495 N sing Y 496 N sing N 497 N sing Y 498 N doub N 499 N sing Y 500 N doub N 501 N sing Y 502 N sing N 503 N sing N 504 N sing N 505 N sing N 506 N sing N 507 N sing N 508 N sing N 509 N sing N 510 N sing N 511 N sing N 512 N sing N 513 N doub N 514 N sing N 515 N sing N 516 N sing N 517 N sing N 518 N sing N 519 N sing N 520 N sing N 521 N sing N 522 N sing N 523 N sing N 524 N sing US Genes Dev. GEDEEP 2056 0890-9369 13 666 674 10090723 Structural basis of DNA recognition by the heterodimeric cell cycle transcription factor E2F-DP. 1999 10.2210/pdb1cf7/pdb pdb_00001cf7 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 127 1 SINGLE WAVELENGTH M x-ray 1 1.1548 1.0 A1 CHESS 1.1548 SYNCHROTRON CHESS BEAMLINE A1 4886.160 DNA (5'-D(*AP*TP*TP*TP*TP*CP*GP*CP*GP*CP*GP*GP*TP*TP*TP*T)-3') ADENOVIRUS TYPE 5 E2 PROMOTER E2F-BINDING SITE 1 syn polymer 4909.235 DNA (5'-D(*TP*AP*AP*AP*AP*CP*CP*GP*CP*GP*CP*GP*AP*AP*AP*A)-3') ADENOVIRUS TYPE 5 E2 PROMOTER E2F-BINDING SITE 1 syn polymer 8352.729 PROTEIN (TRANSCRIPTION FACTOR E2F-4) DNA-BINDING DOMAIN 1 man polymer 10836.347 PROTEIN (TRANSCRIPTION FACTOR DP-2) DNA-BINDING DOMAIN 1 man polymer 18.015 water 75 nat water no no (DA)(DT)(DT)(DT)(DT)(DC)(DG)(DC)(DG)(DC)(DG)(DG)(DT)(DT)(DT)(DT) ATTTTCGCGCGGTTTT C polydeoxyribonucleotide no no (DT)(DA)(DA)(DA)(DA)(DC)(DC)(DG)(DC)(DG)(DC)(DG)(DA)(DA)(DA)(DA) TAAAACCGCGCGAAAA D polydeoxyribonucleotide no no PPGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGP PPGTPSRHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGVGP A polypeptide(L) no no RSKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAADSAYDQKNIRRRVYDALNVLMAMNIISKE KKEIKWIGLPTNSAQ RSKKGDKNGKGLRHFSMKVCEKVQRKGTTSYNEVADELVSEFTNSNNHLAADSAYDQKNIRRRVYDALNVLMAMNIISKE KKEIKWIGLPTNSAQ B polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n human Homo Escherichia sample 9606 Homo sapiens BL21(DE3) CYTOPLASM 562 Escherichia coli PGEX-4T3 human Homo Escherichia sample 9606 Homo sapiens BL21(DE3) CYTOPLASM 562 Escherichia coli PGEX-4T3 1 3.71 66.83 6.0 14-16% PEG 400, 25MM NACL, 50MM MES, 10MM DTT, PH=6.0, 4 DEGREES C, temperature 277K 277 PEG 400 1 NACL 1 MES 1 DTT 1 -2.903 1 20 C 501 D 615 7.396 C_DT501:DA615_D 1 -12.307 0.327 0.041 -0.376 2.770 1 20 C 502 D 614 -0.217 C_DT502:DA614_D 2 -10.419 -0.740 0.006 -0.424 -7.089 1 20 C 503 D 613 -0.160 C_DT503:DA613_D 3 -23.951 -0.515 0.245 -0.003 -16.286 1 20 C 504 D 612 1.592 C_DT504:DA612_D 4 -3.538 0.271 0.279 0.274 -10.981 1 19 C 505 D 611 3.223 C_DC505:DG611_D 5 13.184 0.481 -0.100 0.158 -11.555 1 19 C 506 D 610 -3.908 C_DG506:DC610_D 6 -16.283 -0.449 0.214 -0.209 -13.014 1 19 C 507 D 609 2.989 C_DC507:DG609_D 7 8.099 -0.251 0.100 -0.014 1.353 1 19 C 508 D 608 1.234 C_DG508:DC608_D 8 1.280 0.303 -0.030 -0.155 0.901 1 19 C 509 D 607 -3.687 C_DC509:DG607_D 9 -12.621 0.304 0.609 0.029 5.636 1 19 C 510 D 606 0.839 C_DG510:DC606_D 10 7.577 -0.377 0.021 0.064 1.230 1 19 C 511 D 605 4.114 C_DG511:DC605_D 11 -7.616 0.011 -0.041 -0.339 1.221 1 20 C 512 D 604 4.358 C_DT512:DA604_D 12 -12.213 -0.223 0.055 -0.460 -1.628 1 20 C 513 D 603 4.000 C_DT513:DA603_D 13 -13.993 -0.031 -0.200 -0.257 -0.758 1 20 C 514 D 602 1.863 C_DT514:DA602_D 14 -14.365 -0.161 -0.198 -0.398 0.082 1 20 C 515 D 601 3.139 C_DT515:DA601_D 15 -7.717 0.129 -0.068 -0.286 2.943 32.681 C C 501 502 -0.325 D D 615 614 2.959 -0.183 -0.376 -0.321 CC_DT501DT502:DA614DA615_DD 1 1.397 -2.484 32.652 -0.542 0.886 3.440 42.796 C C 502 503 -4.290 D D 614 613 3.444 -3.128 -0.088 -0.049 CC_DT502DT503:DA613DA614_DD 2 -0.388 0.533 42.686 0.261 0.080 3.576 43.192 C C 503 504 -3.998 D D 613 612 3.568 -2.941 0.743 0.043 CC_DT503DT504:DA612DA613_DD 3 1.148 -1.560 43.082 0.374 -0.886 3.381 30.485 C C 504 505 8.698 D D 612 611 3.359 4.555 1.088 0.014 CC_DT504DC505:DG611DA612_DD 4 1.755 -3.351 30.100 -0.914 -1.706 3.642 35.255 C C 505 506 -7.213 D D 611 610 3.664 -4.355 -1.947 1.051 CC_DC505DG506:DC610DG611_DD 5 -2.607 4.318 34.899 2.461 2.781 3.441 36.942 C C 506 507 -5.114 D D 610 609 3.478 -3.236 1.286 0.350 CC_DG506DC507:DG609DC610_DD 6 0.157 -0.248 36.805 1.015 -2.007 3.488 27.875 C C 507 508 19.397 D D 609 608 3.429 9.176 -0.011 0.752 CC_DC507DG508:DC608DG609_DD 7 -0.210 0.444 26.349 -0.824 -0.032 3.613 36.108 C C 508 509 -5.293 D D 608 607 3.428 -3.260 -1.509 0.107 CC_DG508DC509:DG607DC608_DD 8 -6.374 10.348 35.414 0.674 1.455 3.459 36.956 C C 509 510 -16.191 D D 607 606 3.431 -10.094 1.653 0.273 CC_DC509DG510:DC606DG607_DD 9 6.210 -9.961 35.067 1.904 -1.700 3.355 34.704 C C 510 511 10.912 D D 606 605 3.445 6.472 -0.519 -0.257 CC_DG510DG511:DC605DC606_DD 10 -1.037 1.748 34.098 -1.471 0.703 3.323 33.690 C C 511 512 -6.191 D D 605 604 3.246 -3.581 -0.550 -0.811 CC_DG511DT512:DA604DC605_DD 11 -0.680 1.176 33.498 -0.813 0.837 3.271 39.428 C C 512 513 -2.680 D D 604 603 3.274 -1.807 -0.174 -0.184 CC_DT512DT513:DA603DA604_DD 12 1.371 -2.033 39.365 -0.059 0.420 3.234 37.513 C C 513 514 -5.325 D D 603 602 3.237 -3.420 -0.172 -0.074 CC_DT513DT514:DA602DA603_DD 13 -0.776 1.208 37.354 0.328 0.167 3.217 40.330 C C 514 515 -1.939 D D 602 601 3.241 -1.336 0.471 -0.140 CC_DT514DT515:DA601DA602_DD 14 -2.105 3.054 40.256 -0.054 -0.918 chem_comp_atom chem_comp_bond database_2 repository Initial release Version format compliance Version format compliance Data collection Database references 1 0 1999-04-02 1 1 2008-04-26 1 2 2011-07-13 1 3 2023-12-27 _database_2.pdbx_DOI _database_2.pdbx_database_accession BNL Y RCSB 1999-03-24 REL HOH water HOH 1 5 HOH HOH 1 C HOH 4 5 HOH HOH 4 C HOH 6 5 HOH HOH 6 C HOH 11 5 HOH HOH 11 C HOH 12 5 HOH HOH 12 C HOH 15 5 HOH HOH 15 C HOH 21 5 HOH HOH 21 C HOH 27 5 HOH HOH 27 C HOH 28 5 HOH HOH 28 C HOH 33 5 HOH HOH 33 C HOH 37 5 HOH HOH 37 C HOH 42 5 HOH HOH 42 C HOH 47 5 HOH HOH 47 C HOH 49 5 HOH HOH 49 C HOH 53 5 HOH HOH 53 C HOH 54 5 HOH HOH 54 C HOH 60 5 HOH HOH 60 C HOH 61 5 HOH HOH 61 C HOH 65 5 HOH HOH 65 C HOH 66 5 HOH HOH 66 C HOH 71 5 HOH HOH 71 C HOH 72 5 HOH HOH 72 C HOH 5 5 HOH HOH 5 D HOH 10 5 HOH HOH 10 D HOH 18 5 HOH HOH 18 D HOH 26 5 HOH HOH 26 D HOH 31 5 HOH HOH 31 D HOH 44 5 HOH HOH 44 D HOH 45 5 HOH HOH 45 D HOH 46 5 HOH HOH 46 D HOH 48 5 HOH HOH 48 D HOH 50 5 HOH HOH 50 D HOH 67 5 HOH HOH 67 D HOH 68 5 HOH HOH 68 D HOH 69 5 HOH HOH 69 D HOH 73 5 HOH HOH 73 D HOH 2 5 HOH HOH 87 A HOH 8 5 HOH HOH 88 A HOH 9 5 HOH HOH 89 A HOH 13 5 HOH HOH 90 A HOH 25 5 HOH HOH 91 A HOH 29 5 HOH HOH 92 A HOH 30 5 HOH HOH 93 A HOH 40 5 HOH HOH 94 A HOH 41 5 HOH HOH 95 A HOH 55 5 HOH HOH 96 A HOH 3 5 HOH HOH 155 B HOH 7 5 HOH HOH 156 B HOH 14 5 HOH HOH 157 B HOH 16 5 HOH HOH 158 B HOH 17 5 HOH HOH 159 B HOH 19 5 HOH HOH 160 B HOH 20 5 HOH HOH 161 B HOH 22 5 HOH HOH 162 B HOH 23 5 HOH HOH 163 B HOH 24 5 HOH HOH 164 B HOH 32 5 HOH HOH 165 B HOH 34 5 HOH HOH 166 B HOH 35 5 HOH HOH 167 B HOH 36 5 HOH HOH 168 B HOH 38 5 HOH HOH 169 B HOH 39 5 HOH HOH 170 B HOH 43 5 HOH HOH 171 B HOH 51 5 HOH HOH 172 B HOH 52 5 HOH HOH 173 B HOH 56 5 HOH HOH 174 B HOH 57 5 HOH HOH 175 B HOH 58 5 HOH HOH 176 B HOH 59 5 HOH HOH 177 B HOH 62 5 HOH HOH 178 B HOH 63 5 HOH HOH 179 B HOH 64 5 HOH HOH 180 B HOH 70 5 HOH HOH 181 B HOH 74 5 HOH HOH 182 B HOH 75 5 HOH HOH 183 B n 1 500 C T 501 n 2 DT 501 C T 502 n 3 DT 502 C T 503 n 4 DT 503 C T 504 n 5 DT 504 C C 505 n 6 DC 505 C G 506 n 7 DG 506 C C 507 n 8 DC 507 C G 508 n 9 DG 508 C C 509 n 10 DC 509 C G 510 n 11 DG 510 C G 511 n 12 DG 511 C T 512 n 13 DT 512 C T 513 n 14 DT 513 C T 514 n 15 DT 514 C T 515 n 16 DT 515 C n 1 600 D A 601 n 2 DA 601 D A 602 n 3 DA 602 D A 603 n 4 DA 603 D A 604 n 5 DA 604 D C 605 n 6 DC 605 D C 606 n 7 DC 606 D G 607 n 8 DG 607 D C 608 n 9 DC 608 D G 609 n 10 DG 609 D C 610 n 11 DC 610 D G 611 n 12 DG 611 D A 612 n 13 DA 612 D A 613 n 14 DA 613 D A 614 n 15 DA 614 D A 615 n 16 DA 615 D n 1 11 A n 2 12 A n 3 13 A n 4 14 A n 5 15 A SER 16 n 6 SER 16 A ARG 17 n 7 ARG 17 A HIS 18 n 8 HIS 18 A GLU 19 n 9 GLU 19 A LYS 20 n 10 LYS 20 A SER 21 n 11 SER 21 A LEU 22 n 12 LEU 22 A GLY 23 n 13 GLY 23 A LEU 24 n 14 LEU 24 A LEU 25 n 15 LEU 25 A THR 26 n 16 THR 26 A THR 27 n 17 THR 27 A LYS 28 n 18 LYS 28 A PHE 29 n 19 PHE 29 A VAL 30 n 20 VAL 30 A SER 31 n 21 SER 31 A LEU 32 n 22 LEU 32 A LEU 33 n 23 LEU 33 A GLN 34 n 24 GLN 34 A GLU 35 n 25 GLU 35 A ALA 36 n 26 ALA 36 A LYS 37 n 27 LYS 37 A ASP 38 n 28 ASP 38 A GLY 39 n 29 GLY 39 A VAL 40 n 30 VAL 40 A LEU 41 n 31 LEU 41 A ASP 42 n 32 ASP 42 A LEU 43 n 33 LEU 43 A LYS 44 n 34 LYS 44 A LEU 45 n 35 LEU 45 A ALA 46 n 36 ALA 46 A ALA 47 n 37 ALA 47 A ASP 48 n 38 ASP 48 A THR 49 n 39 THR 49 A LEU 50 n 40 LEU 50 A ALA 51 n 41 ALA 51 A ALA 52 n 42 VAL 52 A ALA 53 n 43 ARG 53 A GLN 54 n 44 GLN 54 A LYS 55 n 45 LYS 55 A ARG 56 n 46 ARG 56 A ARG 57 n 47 ARG 57 A ILE 58 n 48 ILE 58 A TYR 59 n 49 TYR 59 A ASP 60 n 50 ASP 60 A ILE 61 n 51 ILE 61 A THR 62 n 52 THR 62 A ASN 63 n 53 ASN 63 A VAL 64 n 54 VAL 64 A LEU 65 n 55 LEU 65 A GLU 66 n 56 GLU 66 A GLY 67 n 57 GLY 67 A ILE 68 n 58 ILE 68 A GLY 69 n 59 GLY 69 A LEU 70 n 60 LEU 70 A ILE 71 n 61 ILE 71 A GLU 72 n 62 GLU 72 A LYS 73 n 63 LYS 73 A LYS 74 n 64 LYS 74 A SER 75 n 65 SER 75 A LYS 76 n 66 LYS 76 A ASN 77 n 67 ASN 77 A SER 78 n 68 SER 78 A ILE 79 n 69 ILE 79 A GLN 80 n 70 GLN 80 A TRP 81 n 71 TRP 81 A LYS 82 n 72 LYS 82 A n 73 83 A n 74 84 A n 75 85 A n 76 86 A n 1 60 B n 2 61 B n 3 62 B n 4 63 B n 5 64 B n 6 65 B n 7 66 B n 8 67 B GLY 68 n 9 GLY 68 B LYS 69 n 10 LYS 69 B GLY 70 n 11 GLY 70 B LEU 71 n 12 LEU 71 B ARG 72 n 13 ARG 72 B HIS 73 n 14 HIS 73 B PHE 74 n 15 PHE 74 B SER 75 n 16 SER 75 B MET 76 n 17 MET 76 B LYS 77 n 18 LYS 77 B VAL 78 n 19 VAL 78 B CYS 79 n 20 CYS 79 B GLU 80 n 21 GLU 80 B LYS 81 n 22 LYS 81 B VAL 82 n 23 VAL 82 B GLN 83 n 24 GLN 83 B ARG 84 n 25 ARG 84 B LYS 85 n 26 LYS 85 B GLY 86 n 27 GLY 86 B THR 87 n 28 THR 87 B THR 88 n 29 THR 88 B SER 89 n 30 SER 89 B TYR 90 n 31 TYR 90 B ASN 91 n 32 ASN 91 B GLU 92 n 33 GLU 92 B VAL 93 n 34 VAL 93 B ALA 94 n 35 ALA 94 B ASP 95 n 36 ASP 95 B GLU 96 n 37 GLU 96 B LEU 97 n 38 LEU 97 B VAL 98 n 39 VAL 98 B SER 99 n 40 SER 99 B GLU 100 n 41 GLU 100 B PHE 101 n 42 PHE 101 B THR 102 n 43 THR 102 B ASN 103 n 44 ASN 103 B SER 104 n 45 SER 104 B ASN 105 n 46 ASN 105 B ASN 106 n 47 ASN 106 B HIS 107 n 48 HIS 107 B LEU 108 n 49 LEU 108 B ALA 109 n 50 ALA 109 B ALA 110 n 51 ALA 110 B ASP 111 n 52 ASP 111 B SER 112 n 53 SER 112 B ALA 113 n 54 ALA 113 B TYR 114 n 55 TYR 114 B ASP 115 n 56 ASP 115 B GLN 116 n 57 GLN 116 B LYS 117 n 58 LYS 117 B ASN 118 n 59 ASN 118 B ILE 119 n 60 ILE 119 B ARG 120 n 61 ARG 120 B ARG 121 n 62 ARG 121 B ARG 122 n 63 ARG 122 B VAL 123 n 64 VAL 123 B TYR 124 n 65 TYR 124 B ASP 125 n 66 ASP 125 B ALA 126 n 67 ALA 126 B LEU 127 n 68 LEU 127 B ASN 128 n 69 ASN 128 B VAL 129 n 70 VAL 129 B LEU 130 n 71 LEU 130 B MET 131 n 72 MET 131 B ALA 132 n 73 ALA 132 B MET 133 n 74 MET 133 B ASN 134 n 75 ASN 134 B ILE 135 n 76 ILE 135 B ILE 136 n 77 ILE 136 B SER 137 n 78 SER 137 B LYS 138 n 79 LYS 138 B GLU 139 n 80 GLU 139 B LYS 140 n 81 LYS 140 B LYS 141 n 82 LYS 141 B GLU 142 n 83 GLU 142 B ILE 143 n 84 ILE 143 B LYS 144 n 85 LYS 144 B TRP 145 n 86 TRP 145 B ILE 146 n 87 ILE 146 B GLY 147 n 88 GLY 147 B LEU 148 n 89 LEU 148 B PRO 149 n 90 PRO 149 B n 91 150 B n 92 151 B n 93 152 B n 94 153 B n 95 154 B author_defined_assembly 4 tetrameric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O LEU 41 C O LEU 31 A N ILE 79 C N ILE 69 A O SER 78 C O SER 68 A N SER 75 C N SER 65 1 A CG1 VAL 52 C CG1 VAL 42 1 Y 1 A CG2 VAL 52 C CG2 VAL 42 1 Y 1 A CG ARG 53 C CG ARG 43 1 Y 1 A CD ARG 53 C CD ARG 43 1 Y 1 A NE ARG 53 C NE ARG 43 1 Y 1 A CZ ARG 53 C CZ ARG 43 1 Y 1 A NH1 ARG 53 C NH1 ARG 43 1 Y 1 A NH2 ARG 53 C NH2 ARG 43 1 Y 1 C DA 500 A DA 1 1 Y 1 D DT 600 B DT 1 1 Y 1 A PRO 11 C PRO 1 1 Y 1 A PRO 12 C PRO 2 1 Y 1 A GLY 13 C GLY 3 1 Y 1 A THR 14 C THR 4 1 Y 1 A PRO 15 C PRO 5 1 Y 1 A GLY 83 C GLY 73 1 Y 1 A VAL 84 C VAL 74 1 Y 1 A GLY 85 C GLY 75 1 Y 1 A PRO 86 C PRO 76 1 Y 1 B ARG 60 D ARG 1 1 Y 1 B SER 61 D SER 2 1 Y 1 B LYS 62 D LYS 3 1 Y 1 B LYS 63 D LYS 4 1 Y 1 B GLY 64 D GLY 5 1 Y 1 B ASP 65 D ASP 6 1 Y 1 B LYS 66 D LYS 7 1 Y 1 B ASN 67 D ASN 8 1 Y 1 B THR 150 D THR 91 1 Y 1 B ASN 151 D ASN 92 1 Y 1 B SER 152 D SER 93 1 Y 1 B ALA 153 D ALA 94 1 Y 1 B GLN 154 D GLN 95 1 Y 1 C DT 512 0.067 SIDE CHAIN 1 D DG 607 0.065 SIDE CHAIN 1 D DA 614 0.058 SIDE CHAIN 1 -19.18 2.70 111.00 91.82 B B B N CA C TYR TYR TYR 114 114 114 N 1 16.47 2.70 111.00 127.47 B B B N CA C LEU LEU LEU 148 148 148 N 1 A ARG 17 -53.18 1.79 1 A LYS 20 -104.77 45.07 1 A LEU 33 -53.94 -71.65 1 A ALA 36 -51.10 106.69 1 A ASP 38 82.87 -48.59 1 A LEU 50 -97.45 59.31 1 A ALA 51 66.44 -11.13 1 A GLN 54 143.64 127.39 1 A SER 75 -173.86 148.46 1 A LYS 76 -35.10 133.83 1 B LYS 69 -146.55 -159.97 1 B ASP 115 90.58 -69.80 1 B SER 137 -83.37 -76.12 1 B LYS 138 51.75 86.60 1 B LYS 141 82.45 -8.22 1 B ILE 146 -143.20 -98.68 0.2230000 2.6 15 12057 12057 96.5 1 THROUGHOUT 0.0 MIR 2.6 15 75 1875 0 615 1185 0.012 1.75 2.6 20 1CF7 12901 5.4000000 1 2.6 96.5 refinement CNS 0.3A STRUCTURAL BASIS OF DNA RECOGNITION BY THE HETERODIMERIC CELL CYCLE TRANSCRIPTION FACTOR E2F-DP 1 N N 2 N N 3 N N 4 N N 5 N N 5 N N 5 N N 5 N N A LEU 22 C LEU 12 HELX_P A GLU 35 C GLU 25 1 1 14 A LEU 43 C LEU 33 HELX_P A THR 49 C THR 39 1 2 7 A LYS 55 C LYS 45 HELX_P A ILE 68 C ILE 58 5 3 14 B GLY 70 D GLY 11 HELX_P B LYS 85 D LYS 26 1 4 16 B TYR 90 D TYR 31 HELX_P B THR 102 D THR 43 1 5 13 B ALA 109 D ALA 50 HELX_P B ASP 111 D ASP 52 5 6 3 B ALA 113 D ALA 54 HELX_P B ALA 132 D ALA 73 1 7 20 hydrog WATSON-CRICK C DT 501 A N3 DT 2 1_555 D DA 615 B N1 DA 16 1_555 hydrog WATSON-CRICK C DT 501 A O4 DT 2 1_555 D DA 615 B N6 DA 16 1_555 hydrog WATSON-CRICK C DT 502 A N3 DT 3 1_555 D DA 614 B N1 DA 15 1_555 hydrog WATSON-CRICK C DT 502 A O4 DT 3 1_555 D DA 614 B N6 DA 15 1_555 hydrog WATSON-CRICK C DT 503 A N3 DT 4 1_555 D DA 613 B N1 DA 14 1_555 hydrog WATSON-CRICK C DT 503 A O4 DT 4 1_555 D DA 613 B N6 DA 14 1_555 hydrog WATSON-CRICK C DT 504 A N3 DT 5 1_555 D DA 612 B N1 DA 13 1_555 hydrog WATSON-CRICK C DT 504 A O4 DT 5 1_555 D DA 612 B N6 DA 13 1_555 hydrog WATSON-CRICK C DC 505 A N3 DC 6 1_555 D DG 611 B N1 DG 12 1_555 hydrog WATSON-CRICK C DC 505 A N4 DC 6 1_555 D DG 611 B O6 DG 12 1_555 hydrog WATSON-CRICK C DC 505 A O2 DC 6 1_555 D DG 611 B N2 DG 12 1_555 hydrog WATSON-CRICK C DG 506 A N1 DG 7 1_555 D DC 610 B N3 DC 11 1_555 hydrog WATSON-CRICK C DG 506 A N2 DG 7 1_555 D DC 610 B O2 DC 11 1_555 hydrog WATSON-CRICK C DG 506 A O6 DG 7 1_555 D DC 610 B N4 DC 11 1_555 hydrog WATSON-CRICK C DC 507 A N3 DC 8 1_555 D DG 609 B N1 DG 10 1_555 hydrog WATSON-CRICK C DC 507 A N4 DC 8 1_555 D DG 609 B O6 DG 10 1_555 hydrog WATSON-CRICK C DC 507 A O2 DC 8 1_555 D DG 609 B N2 DG 10 1_555 hydrog WATSON-CRICK C DG 508 A N1 DG 9 1_555 D DC 608 B N3 DC 9 1_555 hydrog WATSON-CRICK C DG 508 A N2 DG 9 1_555 D DC 608 B O2 DC 9 1_555 hydrog WATSON-CRICK C DG 508 A O6 DG 9 1_555 D DC 608 B N4 DC 9 1_555 hydrog WATSON-CRICK C DC 509 A N3 DC 10 1_555 D DG 607 B N1 DG 8 1_555 hydrog WATSON-CRICK C DC 509 A N4 DC 10 1_555 D DG 607 B O6 DG 8 1_555 hydrog WATSON-CRICK C DC 509 A O2 DC 10 1_555 D DG 607 B N2 DG 8 1_555 hydrog WATSON-CRICK C DG 510 A N1 DG 11 1_555 D DC 606 B N3 DC 7 1_555 hydrog WATSON-CRICK C DG 510 A N2 DG 11 1_555 D DC 606 B O2 DC 7 1_555 hydrog WATSON-CRICK C DG 510 A O6 DG 11 1_555 D DC 606 B N4 DC 7 1_555 hydrog WATSON-CRICK C DG 511 A N1 DG 12 1_555 D DC 605 B N3 DC 6 1_555 hydrog WATSON-CRICK C DG 511 A N2 DG 12 1_555 D DC 605 B O2 DC 6 1_555 hydrog WATSON-CRICK C DG 511 A O6 DG 12 1_555 D DC 605 B N4 DC 6 1_555 hydrog WATSON-CRICK C DT 512 A N3 DT 13 1_555 D DA 604 B N1 DA 5 1_555 hydrog WATSON-CRICK C DT 512 A O4 DT 13 1_555 D DA 604 B N6 DA 5 1_555 hydrog WATSON-CRICK C DT 513 A N3 DT 14 1_555 D DA 603 B N1 DA 4 1_555 hydrog WATSON-CRICK C DT 513 A O4 DT 14 1_555 D DA 603 B N6 DA 4 1_555 hydrog WATSON-CRICK C DT 514 A N3 DT 15 1_555 D DA 602 B N1 DA 3 1_555 hydrog WATSON-CRICK C DT 514 A O4 DT 15 1_555 D DA 602 B N6 DA 3 1_555 hydrog WATSON-CRICK C DT 515 A N3 DT 16 1_555 D DA 601 B N1 DA 2 1_555 hydrog WATSON-CRICK C DT 515 A O4 DT 16 1_555 D DA 601 B N6 DA 2 1_555 TRANSCRIPTION/DNA E2F, DP, WINGED-HELIX, DNA-BINDING DOMAIN, TRANSCRIPTION FACTOR, CELL CYCLE, TRANSCRIPTION-DNA COMPLEX E2F4_HUMAN UNP 3 Q16254 TDP2_HUMAN UNP 4 Q14188 1CF7 PDB 1 1CF7 1CF7 PDB 2 1CF7 11 86 1CF7 11 86 Q16254 A 1 1 76 60 154 1CF7 60 154 Q14188 B 2 1 95 500 515 1CF7 500 515 1CF7 C 3 1 16 600 615 1CF7 600 615 1CF7 D 4 1 16 3 anti-parallel anti-parallel A VAL 40 C VAL 30 A ASP 42 C ASP 32 A SER 78 C SER 68 A TRP 81 C TRP 71 A ILE 71 C ILE 61 A SER 75 C SER 65 152 trigonal P 31 2 1