0.029762 0.017183 0.000000 0.000000 0.034366 0.000000 0.000000 0.000000 0.024673 0.00000 0.00000 0.00000 Ogihara, N.L. Weiss, M.S. Degrado, W.F. Eisenberg, D. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90.00 90.00 120.00 33.600 33.600 40.530 C2 H4 O 44.053 ACETYL GROUP non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking H2 N 16.023 AMINO GROUP non-polymer C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N C N 2 N O N 3 N C N 4 N H N 5 N H N 6 N H N 7 N H N 8 N N N 9 S C N 10 N C N 11 N O N 12 N C N 13 N O N 14 N H N 15 N H N 16 N H N 17 N H N 18 N H N 19 N H N 20 N H N 21 N N N 22 S C N 23 N C N 24 N O N 25 N C N 26 N C N 27 N C N 28 N O N 29 N N N 30 N O N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N C N 48 N O N 49 N O N 50 N O N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N H N 59 N H N 60 N N N 61 N C N 62 N C N 63 N O N 64 N O N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N N N 71 S C N 72 N C N 73 N O N 74 N C Y 75 N C Y 76 N N Y 77 N C Y 78 N C Y 79 N N N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N O N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N C N 102 N O N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N N N 117 S C N 118 N C N 119 N O N 120 N C N 121 N C N 122 N C N 123 N C N 124 N N N 125 N O N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N N N 142 N H N 143 N H N 144 N N N 145 S C N 146 N C N 147 N O N 148 N C N 149 N O N 150 N O N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N S N 159 N O N 160 N O N 161 N O N 162 N O N 163 N N N 164 S C N 165 N C N 166 N O N 167 N C N 168 N C N 169 N C N 170 N O N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N doub N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N doub N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N doub N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N doub N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N doub N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing Y 76 N sing Y 77 N doub Y 78 N doub N 79 N sing Y 80 N sing N 81 N sing Y 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N doub N 95 N sing N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N doub N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N doub N 149 N doub N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N doub N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing US Protein Sci. PRCIEI 0795 0961-8368 6 80 88 9007979 The crystal structure of the designed trimeric coiled coil coil-VaLd: implications for engineering crystals and supramolecular assemblies. 1997 10.2210/pdb1coi/pdb pdb_00001coi 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 293 1 IMAGE PLATE 1994-05-12 RIGAKU RAXIS IIC M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RUH2R 3206.705 COIL-VALD 1 man polymer 96.063 SULFATE ION 1 syn non-polymer 18.015 water 18 nat water no yes (ACE)EVEALEKKVAALESKVQALEKKVEALEHG(NH2) XEVEALEKKVAALESKVQALEKKVEALEHGX A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n sample 32630 synthetic construct 1 2.06 40.2 5.5 3.0M AMMSO4, 0.05M KH2PO4, PH5.5, 3.5MM NAOH chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_initial_refinement_model struct_conn struct_site repository Initial release Version format compliance Derived calculations Version format compliance Data collection Database references Derived calculations Other Refinement description 1 0 1997-02-12 1 1 2008-03-24 1 2 2011-07-13 1 3 2024-04-03 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1996-08-10 REL SO4 SULFATE ION HOH water IDEAL ALPHA-HELIX Other in silico model SO4 31 2 SO4 SO4 31 A HOH 32 3 HOH HOH 32 A HOH 33 3 HOH HOH 33 A HOH 34 3 HOH HOH 34 A HOH 35 3 HOH HOH 35 A HOH 36 3 HOH HOH 36 A HOH 37 3 HOH HOH 37 A HOH 38 3 HOH HOH 38 A HOH 39 3 HOH HOH 39 A HOH 40 3 HOH HOH 40 A HOH 41 3 HOH HOH 41 A HOH 42 3 HOH HOH 42 A HOH 43 3 HOH HOH 43 A HOH 44 3 HOH HOH 44 A HOH 45 3 HOH HOH 45 A HOH 46 3 HOH HOH 46 A HOH 47 3 HOH HOH 47 A HOH 48 3 HOH HOH 48 A HOH 49 3 HOH HOH 49 A ACE 0 n 1 ACE 0 A GLU 1 n 2 GLU 1 A VAL 2 n 3 VAL 2 A GLU 3 n 4 GLU 3 A ALA 4 n 5 ALA 4 A LEU 5 n 6 LEU 5 A GLU 6 n 7 GLU 6 A LYS 7 n 8 LYS 7 A LYS 8 n 9 LYS 8 A VAL 9 n 10 VAL 9 A ALA 10 n 11 ALA 10 A ALA 11 n 12 ALA 11 A LEU 12 n 13 LEU 12 A GLU 13 n 14 GLU 13 A SER 14 n 15 SER 14 A LYS 15 n 16 LYS 15 A VAL 16 n 17 VAL 16 A GLN 17 n 18 GLN 17 A ALA 18 n 19 ALA 18 A LEU 19 n 20 LEU 19 A GLU 20 n 21 GLU 20 A LYS 21 n 22 LYS 21 A LYS 22 n 23 LYS 22 A VAL 23 n 24 VAL 23 A GLU 24 n 25 GLU 24 A ALA 25 n 26 ALA 25 A LEU 26 n 27 LEU 26 A GLU 27 n 28 GLU 27 A HIS 28 n 29 HIS 28 A GLY 29 n 30 GLY 29 A NH2 30 n 31 NH2 30 A author_and_software_defined_assembly PISA,PQS 3 trimeric 3910 -26 6210 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -0.5000000000 -0.8660254038 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 2_655 -y+1,x-y,z crystal symmetry operation 33.6000000000 0.0000000000 0.0000000000 -0.5000000000 0.8660254038 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 3_665 -x+y+1,-x+1,z crystal symmetry operation 16.8000000000 29.0984535672 0.0000000000 1 A SO4 31 B SO4 1 A A S O1 SO4 SO4 31 31 1.42 1_555 6_767 1 A A S O2 SO4 SO4 31 31 1.46 1_555 6_767 1 A A S O4 SO4 SO4 31 31 1.49 1_555 6_767 1 A A S O3 SO4 SO4 31 31 1.51 1_555 6_767 1 A HIS 28 50.09 90.11 18.6 0.2850000 0.2140000 0.2140000 2.1 10.0 166 1691 10. 99.95 1 0. MOLECULAR REPLACEMENT IDEAL ALPHA-HELIX 0.25 2.1 10.0 18 249 5 0 226 0.013 1.4 17.0 1.7 0.2990000 0.2402000 2.18 12 153 9.69 100. 17.7 2.10 40.53 1COI 1710 0. 0.0910000 1 31.36 21. 99.7 0.2290000 2.10 2.18 1 100. model building X-PLOR 3.1 refinement X-PLOR 3.1 data reduction DENZO data scaling SCALEPACK phasing X-PLOR 3.1 DESIGNED TRIMERIC COILED COIL-VALD 1 N N 2 N N 3 N N A VAL 2 A VAL 3 HELX_P A LEU 26 A LEU 27 1 1 25 covale 1.332 both A ACE 0 A C ACE 1 1_555 A GLU 1 A N GLU 2 1_555 covale 1.338 both A GLY 29 A C GLY 30 1_555 A NH2 30 A N NH2 31 1_555 ALPHA-HELICAL BUNDLE ALPHA-HELICAL BUNDLE, PROTEIN DESIGN, COILED COIL DESIGN 1COI PDB 1 1COI 0 30 1COI 0 30 1COI A 1 1 31 BINDING SITE FOR RESIDUE SO4 A 31 A SO4 31 Software 4 A LYS 22 A LYS 23 4 3_665 A LYS 22 A LYS 23 4 5_667 A HIS 28 A HIS 29 4 1_555 A HIS 28 A HIS 29 4 6_767 150 P 3 2 1