0.029762
0.017183
0.000000
0.000000
0.034366
0.000000
0.000000
0.000000
0.024673
0.00000
0.00000
0.00000
Ogihara, N.L.
Weiss, M.S.
Degrado, W.F.
Eisenberg, D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
6
90.00
90.00
120.00
33.600
33.600
40.530
C2 H4 O
44.053
ACETYL GROUP
non-polymer
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
H2 N
16.023
AMINO GROUP
non-polymer
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
C
N
2
N
O
N
3
N
C
N
4
N
H
N
5
N
H
N
6
N
H
N
7
N
H
N
8
N
N
N
9
S
C
N
10
N
C
N
11
N
O
N
12
N
C
N
13
N
O
N
14
N
H
N
15
N
H
N
16
N
H
N
17
N
H
N
18
N
H
N
19
N
H
N
20
N
H
N
21
N
N
N
22
S
C
N
23
N
C
N
24
N
O
N
25
N
C
N
26
N
C
N
27
N
C
N
28
N
O
N
29
N
N
N
30
N
O
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
C
N
48
N
O
N
49
N
O
N
50
N
O
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
N
N
61
N
C
N
62
N
C
N
63
N
O
N
64
N
O
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
N
N
71
S
C
N
72
N
C
N
73
N
O
N
74
N
C
Y
75
N
C
Y
76
N
N
Y
77
N
C
Y
78
N
C
Y
79
N
N
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
H
N
89
N
H
N
90
N
H
N
91
N
O
N
92
N
H
N
93
N
H
N
94
N
N
N
95
S
C
N
96
N
C
N
97
N
O
N
98
N
C
N
99
N
C
N
100
N
C
N
101
N
C
N
102
N
O
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
H
N
110
N
H
N
111
N
H
N
112
N
H
N
113
N
H
N
114
N
H
N
115
N
H
N
116
N
N
N
117
S
C
N
118
N
C
N
119
N
O
N
120
N
C
N
121
N
C
N
122
N
C
N
123
N
C
N
124
N
N
N
125
N
O
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
N
N
142
N
H
N
143
N
H
N
144
N
N
N
145
S
C
N
146
N
C
N
147
N
O
N
148
N
C
N
149
N
O
N
150
N
O
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
S
N
159
N
O
N
160
N
O
N
161
N
O
N
162
N
O
N
163
N
N
N
164
S
C
N
165
N
C
N
166
N
O
N
167
N
C
N
168
N
C
N
169
N
C
N
170
N
O
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
1
N
doub
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
doub
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
doub
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
doub
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
doub
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
doub
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
sing
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
Y
76
N
sing
Y
77
N
doub
Y
78
N
doub
N
79
N
sing
Y
80
N
sing
N
81
N
sing
Y
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
doub
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
doub
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
doub
N
149
N
doub
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
US
Protein Sci.
PRCIEI
0795
0961-8368
6
80
88
9007979
The crystal structure of the designed trimeric coiled coil coil-VaLd: implications for engineering crystals and supramolecular assemblies.
1997
10.2210/pdb1coi/pdb
pdb_00001coi
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
293
1
IMAGE PLATE
1994-05-12
RIGAKU RAXIS IIC
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RUH2R
3206.705
COIL-VALD
1
man
polymer
96.063
SULFATE ION
1
syn
non-polymer
18.015
water
18
nat
water
no
yes
(ACE)EVEALEKKVAALESKVQALEKKVEALEHG(NH2)
XEVEALEKKVAALESKVQALEKKVEALEHGX
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
sample
32630
synthetic construct
1
2.06
40.2
5.5
3.0M AMMSO4, 0.05M KH2PO4, PH5.5, 3.5MM NAOH
chem_comp_atom
chem_comp_bond
database_2
pdbx_database_status
pdbx_initial_refinement_model
struct_conn
struct_site
repository
Initial release
Version format compliance
Derived calculations
Version format compliance
Data collection
Database references
Derived calculations
Other
Refinement description
1
0
1997-02-12
1
1
2008-03-24
1
2
2011-07-13
1
3
2024-04-03
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
Y
BNL
1996-08-10
REL
SO4
SULFATE ION
HOH
water
IDEAL ALPHA-HELIX
Other
in silico model
SO4
31
2
SO4
SO4
31
A
HOH
32
3
HOH
HOH
32
A
HOH
33
3
HOH
HOH
33
A
HOH
34
3
HOH
HOH
34
A
HOH
35
3
HOH
HOH
35
A
HOH
36
3
HOH
HOH
36
A
HOH
37
3
HOH
HOH
37
A
HOH
38
3
HOH
HOH
38
A
HOH
39
3
HOH
HOH
39
A
HOH
40
3
HOH
HOH
40
A
HOH
41
3
HOH
HOH
41
A
HOH
42
3
HOH
HOH
42
A
HOH
43
3
HOH
HOH
43
A
HOH
44
3
HOH
HOH
44
A
HOH
45
3
HOH
HOH
45
A
HOH
46
3
HOH
HOH
46
A
HOH
47
3
HOH
HOH
47
A
HOH
48
3
HOH
HOH
48
A
HOH
49
3
HOH
HOH
49
A
ACE
0
n
1
ACE
0
A
GLU
1
n
2
GLU
1
A
VAL
2
n
3
VAL
2
A
GLU
3
n
4
GLU
3
A
ALA
4
n
5
ALA
4
A
LEU
5
n
6
LEU
5
A
GLU
6
n
7
GLU
6
A
LYS
7
n
8
LYS
7
A
LYS
8
n
9
LYS
8
A
VAL
9
n
10
VAL
9
A
ALA
10
n
11
ALA
10
A
ALA
11
n
12
ALA
11
A
LEU
12
n
13
LEU
12
A
GLU
13
n
14
GLU
13
A
SER
14
n
15
SER
14
A
LYS
15
n
16
LYS
15
A
VAL
16
n
17
VAL
16
A
GLN
17
n
18
GLN
17
A
ALA
18
n
19
ALA
18
A
LEU
19
n
20
LEU
19
A
GLU
20
n
21
GLU
20
A
LYS
21
n
22
LYS
21
A
LYS
22
n
23
LYS
22
A
VAL
23
n
24
VAL
23
A
GLU
24
n
25
GLU
24
A
ALA
25
n
26
ALA
25
A
LEU
26
n
27
LEU
26
A
GLU
27
n
28
GLU
27
A
HIS
28
n
29
HIS
28
A
GLY
29
n
30
GLY
29
A
NH2
30
n
31
NH2
30
A
author_and_software_defined_assembly
PISA,PQS
3
trimeric
3910
-26
6210
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-0.5000000000
-0.8660254038
0.0000000000
0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_655
-y+1,x-y,z
crystal symmetry operation
33.6000000000
0.0000000000
0.0000000000
-0.5000000000
0.8660254038
0.0000000000
-0.8660254038
-0.5000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
3_665
-x+y+1,-x+1,z
crystal symmetry operation
16.8000000000
29.0984535672
0.0000000000
1
A
SO4
31
B
SO4
1
A
A
S
O1
SO4
SO4
31
31
1.42
1_555
6_767
1
A
A
S
O2
SO4
SO4
31
31
1.46
1_555
6_767
1
A
A
S
O4
SO4
SO4
31
31
1.49
1_555
6_767
1
A
A
S
O3
SO4
SO4
31
31
1.51
1_555
6_767
1
A
HIS
28
50.09
90.11
18.6
0.2850000
0.2140000
0.2140000
2.1
10.0
166
1691
10.
99.95
1
0.
MOLECULAR REPLACEMENT
IDEAL ALPHA-HELIX
0.25
2.1
10.0
18
249
5
0
226
0.013
1.4
17.0
1.7
0.2990000
0.2402000
2.18
12
153
9.69
100.
17.7
2.10
40.53
1COI
1710
0.
0.0910000
1
31.36
21.
99.7
0.2290000
2.10
2.18
1
100.
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
data reduction
DENZO
data scaling
SCALEPACK
phasing
X-PLOR
3.1
DESIGNED TRIMERIC COILED COIL-VALD
1
N
N
2
N
N
3
N
N
A
VAL
2
A
VAL
3
HELX_P
A
LEU
26
A
LEU
27
1
1
25
covale
1.332
both
A
ACE
0
A
C
ACE
1
1_555
A
GLU
1
A
N
GLU
2
1_555
covale
1.338
both
A
GLY
29
A
C
GLY
30
1_555
A
NH2
30
A
N
NH2
31
1_555
ALPHA-HELICAL BUNDLE
ALPHA-HELICAL BUNDLE, PROTEIN DESIGN, COILED COIL DESIGN
1COI
PDB
1
1COI
0
30
1COI
0
30
1COI
A
1
1
31
BINDING SITE FOR RESIDUE SO4 A 31
A
SO4
31
Software
4
A
LYS
22
A
LYS
23
4
3_665
A
LYS
22
A
LYS
23
4
5_667
A
HIS
28
A
HIS
29
4
1_555
A
HIS
28
A
HIS
29
4
6_767
150
P 3 2 1