1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 CIS PROLINE - PRO 322 Jeon, Y.H. Negishi, T. Shirakawa, M. Yamazaki, T. Fujita, N. Ishihama, A. Kyogoku, Y. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 R C N 76 N C N 77 N O N 78 N C N 79 N S N 80 N O N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N N N 89 S C N 90 N C N 91 N O N 92 N C N 93 N C N 94 N C N 95 N O N 96 N N N 97 N O N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N N N 109 S C N 110 N C N 111 N O N 112 N C N 113 N C N 114 N C N 115 N O N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N N N 128 N C N 129 N C N 130 N O N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N N N 138 S C N 139 N C N 140 N O N 141 N C Y 142 N C Y 143 N N Y 144 N C Y 145 N C Y 146 N N N 147 N O N 148 N H N 149 N H N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N N N 159 S C N 160 N C N 161 N O N 162 S C N 163 N C N 164 N C N 165 N C N 166 N O N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N H N 180 N N N 181 S C N 182 N C N 183 N O N 184 N C N 185 N C N 186 N C N 187 N C N 188 N O N 189 N H N 190 N H N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N N N 203 S C N 204 N C N 205 N O N 206 N C N 207 N C N 208 N C N 209 N C N 210 N N N 211 N O N 212 N H N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N H N 227 N N N 228 S C N 229 N C N 230 N O N 231 N C N 232 N C N 233 N S N 234 N C N 235 N O N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N N N 248 S C N 249 N C N 250 N O N 251 N C Y 252 N C Y 253 N C Y 254 N C Y 255 N C Y 256 N C Y 257 N C N 258 N O N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N N N 271 S C N 272 N C N 273 N O N 274 N C N 275 N C N 276 N C N 277 N O N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 N C N 292 N O N 293 N O N 294 N H N 295 N H N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N N N 302 S C N 303 N C N 304 N O N 305 R C N 306 N O N 307 N C N 308 N O N 309 N H N 310 N H N 311 N H N 312 N H N 313 N H N 314 N H N 315 N H N 316 N H N 317 N H N 318 N N N 319 S C N 320 N C N 321 N O N 322 N C Y 323 N C Y 324 N C Y 325 N C Y 326 N N Y 327 N C Y 328 N C Y 329 N C Y 330 N C Y 331 N C N 332 N O N 333 N H N 334 N H N 335 N H N 336 N H N 337 N H N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N N N 346 S C N 347 N C N 348 N O N 349 N C Y 350 N C Y 351 N C Y 352 N C Y 353 N C Y 354 N C Y 355 N C N 356 N O N 357 N O N 358 N H N 359 N H N 360 N H N 361 N H N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N N N 370 S C N 371 N C N 372 N O N 373 N C N 374 N C N 375 N C N 376 N O N 377 N H N 378 N H N 379 N H N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N doub N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing N 97 N doub N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N doub N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N doub N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N doub N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N doub N 136 N sing N 137 N sing N 138 N sing N 139 N sing Y 140 N sing Y 141 N doub Y 142 N doub N 143 N sing Y 144 N sing N 145 N sing Y 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N doub N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N doub N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N doub N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N sing N 221 N sing N 222 N doub N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N doub N 242 N sing N 243 N sing N 244 N sing N 245 N sing Y 246 N doub Y 247 N sing Y 248 N sing N 249 N sing Y 250 N doub N 251 N sing Y 252 N doub N 253 N sing Y 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N sing N 264 N doub N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N doub N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N doub N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N doub N 311 N sing N 312 N sing N 313 N sing N 314 N sing Y 315 N doub Y 316 N sing Y 317 N sing N 318 N sing Y 319 N doub Y 320 N sing Y 321 N sing N 322 N sing Y 323 N sing Y 324 N doub N 325 N sing Y 326 N doub N 327 N sing Y 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N sing N 337 N sing N 338 N doub N 339 N sing N 340 N sing N 341 N sing N 342 N sing Y 343 N doub Y 344 N sing Y 345 N sing N 346 N sing Y 347 N doub N 348 N sing Y 349 N doub N 350 N sing Y 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N doub N 363 N sing N 364 N sing N 365 N sing N 366 N sing N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing US Science SCIEAS 0038 0036-8075 270 1495 1497 7491496 Solution structure of the activator contact domain of the RNA polymerase alpha subunit. 1995 UK J.Mol.Biol. JMOBAK 0070 0022-2836 248 723 Structural Map of the Alpha Subunit of Escherichia Coli RNA Polymerase; Structural Domains Identified by Proteolytic Cleavage 1995 10.2210/pdb1coo/pdb pdb_00001coo 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 11094.724 RNA POLYMERASE ALPHA SUBUNIT COOH-TERMINAL DOMAIN 1 man polymer no no MDLRDVREPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRG LSLGMRLENWPPASIADE MDLRDVREPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRG LSLGMRLENWPPASIADE A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia coli K12 Escherichia sample NH315 83333 Escherichia coli 562 Escherichia coli PET-3A chem_comp_atom chem_comp_bond database_2 pdbx_database_status struct_ref_seq_dif repository Initial release Version format compliance Source and taxonomy Version format compliance Data collection Database references Other 1 0 1996-03-08 1 1 2008-03-24 1 2 2011-07-13 1 3 2024-04-10 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _struct_ref_seq_dif.details Y BNL 1995-10-09 REL 1 BRUNGER refinement X-PLOR 3.1 n 1 232 A n 2 233 A n 3 234 A n 4 235 A n 5 236 A n 6 237 A n 7 238 A n 8 239 A n 9 240 A n 10 241 A n 11 242 A n 12 243 A n 13 244 A n 14 245 A n 15 246 A n 16 247 A n 17 248 A PHE 249 n 18 PHE 249 A ASP 250 n 19 ASP 250 A PRO 251 n 20 PRO 251 A ILE 252 n 21 ILE 252 A LEU 253 n 22 LEU 253 A LEU 254 n 23 LEU 254 A ARG 255 n 24 ARG 255 A PRO 256 n 25 PRO 256 A VAL 257 n 26 VAL 257 A ASP 258 n 27 ASP 258 A ASP 259 n 28 ASP 259 A LEU 260 n 29 LEU 260 A GLU 261 n 30 GLU 261 A LEU 262 n 31 LEU 262 A THR 263 n 32 THR 263 A VAL 264 n 33 VAL 264 A ARG 265 n 34 ARG 265 A SER 266 n 35 SER 266 A ALA 267 n 36 ALA 267 A ASN 268 n 37 ASN 268 A CYS 269 n 38 CYS 269 A LEU 270 n 39 LEU 270 A LYS 271 n 40 LYS 271 A ALA 272 n 41 ALA 272 A GLU 273 n 42 GLU 273 A ALA 274 n 43 ALA 274 A ILE 275 n 44 ILE 275 A HIS 276 n 45 HIS 276 A TYR 277 n 46 TYR 277 A ILE 278 n 47 ILE 278 A GLY 279 n 48 GLY 279 A ASP 280 n 49 ASP 280 A LEU 281 n 50 LEU 281 A VAL 282 n 51 VAL 282 A GLN 283 n 52 GLN 283 A ARG 284 n 53 ARG 284 A THR 285 n 54 THR 285 A GLU 286 n 55 GLU 286 A VAL 287 n 56 VAL 287 A GLU 288 n 57 GLU 288 A LEU 289 n 58 LEU 289 A LEU 290 n 59 LEU 290 A LYS 291 n 60 LYS 291 A THR 292 n 61 THR 292 A PRO 293 n 62 PRO 293 A ASN 294 n 63 ASN 294 A LEU 295 n 64 LEU 295 A GLY 296 n 65 GLY 296 A LYS 297 n 66 LYS 297 A LYS 298 n 67 LYS 298 A SER 299 n 68 SER 299 A LEU 300 n 69 LEU 300 A THR 301 n 70 THR 301 A GLU 302 n 71 GLU 302 A ILE 303 n 72 ILE 303 A LYS 304 n 73 LYS 304 A ASP 305 n 74 ASP 305 A VAL 306 n 75 VAL 306 A LEU 307 n 76 LEU 307 A ALA 308 n 77 ALA 308 A SER 309 n 78 SER 309 A ARG 310 n 79 ARG 310 A GLY 311 n 80 GLY 311 A LEU 312 n 81 LEU 312 A SER 313 n 82 SER 313 A LEU 314 n 83 LEU 314 A GLY 315 n 84 GLY 315 A MET 316 n 85 MET 316 A ARG 317 n 86 ARG 317 A LEU 318 n 87 LEU 318 A GLU 319 n 88 GLU 319 A ASN 320 n 89 ASN 320 A TRP 321 n 90 TRP 321 A PRO 322 n 91 PRO 322 A PRO 323 n 92 PRO 323 A ALA 324 n 93 ALA 324 A SER 325 n 94 SER 325 A ILE 326 n 95 ILE 326 A ALA 327 n 96 ALA 327 A ASP 328 n 97 ASP 328 A GLU 329 n 98 GLU 329 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A MET 232 A MET 1 1 Y 1 A ASP 233 A ASP 2 1 Y 1 A LEU 234 A LEU 3 1 Y 1 A ARG 235 A ARG 4 1 Y 1 A ASP 236 A ASP 5 1 Y 1 A VAL 237 A VAL 6 1 Y 1 A ARG 238 A ARG 7 1 Y 1 A GLU 239 A GLU 8 1 Y 1 A PRO 240 A PRO 9 1 Y 1 A GLU 241 A GLU 10 1 Y 1 A VAL 242 A VAL 11 1 Y 1 A LYS 243 A LYS 12 1 Y 1 A GLU 244 A GLU 13 1 Y 1 A GLU 245 A GLU 14 1 Y 1 A LYS 246 A LYS 15 1 Y 1 A PRO 247 A PRO 16 1 Y 1 A GLU 248 A GLU 17 1 Y 1 A LEU 262 -88.25 -151.71 1 A THR 263 -77.90 -169.00 1 A SER 266 -86.42 -76.32 1 A GLN 283 -85.17 37.18 1 A ARG 284 -134.98 -143.50 1 A LEU 290 -90.02 32.71 1 A LYS 291 -141.86 14.92 1 A PRO 293 -79.82 28.15 1 A ASN 294 -160.71 25.19 1 A LEU 295 -114.69 -142.44 1 A MET 316 -63.72 86.87 1 A GLU 319 -61.17 -138.36 1 A ILE 326 -141.14 43.32 model building X-PLOR 3.1 refinement X-PLOR 3.1 phasing X-PLOR 3.1 THE COOH-TERMINAL DOMAIN OF RNA POLYMERASE ALPHA SUBUNIT 1 Y N A VAL 264 A VAL 33 HELX_P A GLU 273 A GLU 42 1 H1 10 A ILE 278 A ILE 47 HELX_P A GLN 283 A GLN 52 1 H2 6 A GLU 286 A GLU 55 HELX_P A THR 292 A THR 61 1 H3 7 A LYS 297 A LYS 66 HELX_P A SER 309 A SER 78 1 H4 13 NUCLEOTIDYL TRANSFERASE TRANSCRIPTION REGULATION, NUCLEOTIDYL TRANSFERASE A TRP 321 A TRP 90 1 A PRO 322 A PRO 91 -0.68 RPOA_ECOLI UNP 1 1 P0A7Z4 MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILE ILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIH SEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLEN WPPASIADE 233 329 1COO 233 329 P0A7Z4 A 1 2 98 1 GLN conflict GLU 239 1COO A P0A7Z4 UNP 239 8 1 P 1