0.020534
0.000000
0.005861
0.000000
0.023364
0.000000
0.000000
0.000000
0.020634
0.00000
0.00000
0.00000
Thies, M.J.
Mayer, J.
Augustine, J.G.
Frederick, C.A.
Lilie, H.
Buchner, J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
105.93
90.00
48.700
42.800
50.400
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
293
67
79
10.1006/jmbi.1999.3128
10512716
Folding and association of the antibody domain CH3: prolyl isomerization preceeds dimerization.
1999
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
20
1
IMAGE PLATE
1998-07-14
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU
11520.786
CH3 DOMAIN OF MAK33 ANTIBODY
CH3 DOMAIN OF MAK33 ANTIBODY
K5A, K16L, K23L
2
man
polymer
18.015
water
77
nat
water
no
no
PAAPQVYTIPPPLEQMAKDLVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNT
FTCSVLHEGLHNHHTEKSLSH
PAAPQVYTIPPPLEQMAKDLVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNT
FTCSVLHEGLHNHHTEKSLSH
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
sample
10090
Mus musculus
562
Escherichia coli
1
2.19
43.89
VAPOR DIFFUSION, SITTING DROP
8.5
Tris, ammonium sulfate, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 18K
291.0
exptl_crystal_grow
pdbx_unobs_or_zero_occ_atoms
struct_ref_seq_dif
entity
entity_src_gen
entity_src_nat
pdbx_distant_solvent_atoms
repository
Initial release
Version format compliance
Version format compliance
Advisory
Experimental preparation
Database references
Advisory
Data collection
Source and taxonomy
Structure summary
1
0
1999-09-11
1
1
2008-04-27
1
2
2011-07-13
1
3
2018-01-31
1
4
2018-03-14
1
5
2018-08-29
_exptl_crystal_grow.temp
_struct_ref_seq_dif.details
_entity.src_method
RCSB
Y
RCSB
1999-08-06
REL
REL
1
B
O
HOH
47
9.45
1
B
O
HOH
79
6.31
HOH
water
TIP
2
2
HOH
HOH
105
A
TIP
3
2
HOH
HOH
106
A
TIP
5
2
HOH
HOH
107
A
TIP
9
2
HOH
HOH
108
A
TIP
11
2
HOH
HOH
109
A
TIP
15
2
HOH
HOH
110
A
TIP
17
2
HOH
HOH
111
A
TIP
19
2
HOH
HOH
112
A
TIP
21
2
HOH
HOH
113
A
TIP
25
2
HOH
HOH
114
A
TIP
26
2
HOH
HOH
115
A
TIP
27
2
HOH
HOH
116
A
TIP
29
2
HOH
HOH
117
A
TIP
34
2
HOH
HOH
118
A
TIP
41
2
HOH
HOH
119
A
TIP
45
2
HOH
HOH
120
A
TIP
46
2
HOH
HOH
121
A
TIP
49
2
HOH
HOH
122
A
TIP
52
2
HOH
HOH
123
A
TIP
55
2
HOH
HOH
124
A
TIP
56
2
HOH
HOH
125
A
TIP
58
2
HOH
HOH
126
A
TIP
60
2
HOH
HOH
127
A
TIP
61
2
HOH
HOH
128
A
TIP
64
2
HOH
HOH
129
A
TIP
65
2
HOH
HOH
130
A
TIP
66
2
HOH
HOH
131
A
TIP
67
2
HOH
HOH
132
A
TIP
74
2
HOH
HOH
133
A
TIP
78
2
HOH
HOH
134
A
TIP
1
2
HOH
HOH
1
B
TIP
4
2
HOH
HOH
4
B
TIP
6
2
HOH
HOH
6
B
TIP
7
2
HOH
HOH
7
B
TIP
8
2
HOH
HOH
8
B
TIP
10
2
HOH
HOH
10
B
TIP
12
2
HOH
HOH
12
B
TIP
13
2
HOH
HOH
13
B
TIP
14
2
HOH
HOH
14
B
TIP
16
2
HOH
HOH
16
B
TIP
18
2
HOH
HOH
18
B
TIP
20
2
HOH
HOH
20
B
TIP
22
2
HOH
HOH
22
B
TIP
23
2
HOH
HOH
23
B
TIP
24
2
HOH
HOH
24
B
TIP
28
2
HOH
HOH
28
B
TIP
30
2
HOH
HOH
30
B
TIP
31
2
HOH
HOH
31
B
TIP
32
2
HOH
HOH
32
B
TIP
35
2
HOH
HOH
35
B
TIP
36
2
HOH
HOH
36
B
TIP
37
2
HOH
HOH
37
B
TIP
38
2
HOH
HOH
38
B
TIP
39
2
HOH
HOH
39
B
TIP
40
2
HOH
HOH
40
B
TIP
42
2
HOH
HOH
42
B
TIP
43
2
HOH
HOH
43
B
TIP
44
2
HOH
HOH
44
B
TIP
47
2
HOH
HOH
47
B
TIP
48
2
HOH
HOH
48
B
TIP
50
2
HOH
HOH
50
B
TIP
51
2
HOH
HOH
51
B
TIP
53
2
HOH
HOH
53
B
TIP
54
2
HOH
HOH
54
B
TIP
57
2
HOH
HOH
57
B
TIP
59
2
HOH
HOH
59
B
TIP
62
2
HOH
HOH
62
B
TIP
63
2
HOH
HOH
63
B
TIP
68
2
HOH
HOH
68
B
TIP
69
2
HOH
HOH
69
B
TIP
70
2
HOH
HOH
70
B
TIP
71
2
HOH
HOH
71
B
TIP
72
2
HOH
HOH
72
B
TIP
73
2
HOH
HOH
73
B
TIP
76
2
HOH
HOH
76
B
TIP
77
2
HOH
HOH
77
B
TIP
79
2
HOH
HOH
79
B
PRO
4
n
1
PRO
4
A
ALA
5
n
2
ALA
5
A
ALA
6
n
3
ALA
6
A
PRO
7
n
4
PRO
7
A
GLN
8
n
5
GLN
8
A
VAL
9
n
6
VAL
9
A
TYR
10
n
7
TYR
10
A
THR
11
n
8
THR
11
A
ILE
12
n
9
ILE
12
A
PRO
13
n
10
PRO
13
A
PRO
14
n
11
PRO
14
A
PRO
15
n
12
PRO
15
A
LEU
16
n
13
LEU
16
A
GLU
17
n
14
GLU
17
A
GLN
18
n
15
GLN
18
A
MET
19
n
16
MET
19
A
ALA
20
n
17
ALA
20
A
LYS
21
n
18
LYS
21
A
ASP
22
n
19
ASP
22
A
LEU
23
n
20
LEU
23
A
VAL
24
n
21
VAL
24
A
SER
25
n
22
SER
25
A
LEU
26
n
23
LEU
26
A
THR
27
n
24
THR
27
A
CYS
28
n
25
CYS
28
A
MET
29
n
26
MET
29
A
ILE
30
n
27
ILE
30
A
THR
31
n
28
THR
31
A
ASP
32
n
29
ASP
32
A
PHE
33
n
30
PHE
33
A
PHE
34
n
31
PHE
34
A
PRO
35
n
32
PRO
35
A
GLU
36
n
33
GLU
36
A
ASP
37
n
34
ASP
37
A
ILE
38
n
35
ILE
38
A
THR
39
n
36
THR
39
A
VAL
40
n
37
VAL
40
A
GLU
41
n
38
GLU
41
A
TRP
42
n
39
TRP
42
A
GLN
43
n
40
GLN
43
A
TRP
44
n
41
TRP
44
A
ASN
45
n
42
ASN
45
A
GLY
46
n
43
GLY
46
A
GLN
47
n
44
GLN
47
A
PRO
48
n
45
PRO
48
A
ALA
49
n
46
ALA
49
A
GLU
50
n
47
GLU
50
A
ASN
51
n
48
ASN
51
A
TYR
52
n
49
TYR
52
A
LYS
53
n
50
LYS
53
A
ASN
54
n
51
ASN
54
A
THR
55
n
52
THR
55
A
GLN
56
n
53
GLN
56
A
PRO
57
n
54
PRO
57
A
ILE
58
n
55
ILE
58
A
MET
59
n
56
MET
59
A
ASP
60
n
57
ASP
60
A
THR
61
n
58
THR
61
A
ASP
62
n
59
ASP
62
A
GLY
63
n
60
GLY
63
A
SER
64
n
61
SER
64
A
TYR
65
n
62
TYR
65
A
PHE
66
n
63
PHE
66
A
VAL
67
n
64
VAL
67
A
TYR
68
n
65
TYR
68
A
SER
69
n
66
SER
69
A
LYS
70
n
67
LYS
70
A
LEU
71
n
68
LEU
71
A
ASN
72
n
69
ASN
72
A
VAL
73
n
70
VAL
73
A
GLN
74
n
71
GLN
74
A
LYS
75
n
72
LYS
75
A
SER
76
n
73
SER
76
A
ASN
77
n
74
ASN
77
A
TRP
78
n
75
TRP
78
A
GLU
79
n
76
GLU
79
A
ALA
80
n
77
ALA
80
A
GLY
81
n
78
GLY
81
A
ASN
82
n
79
ASN
82
A
THR
83
n
80
THR
83
A
PHE
84
n
81
PHE
84
A
THR
85
n
82
THR
85
A
CYS
86
n
83
CYS
86
A
SER
87
n
84
SER
87
A
VAL
88
n
85
VAL
88
A
LEU
89
n
86
LEU
89
A
HIS
90
n
87
HIS
90
A
GLU
91
n
88
GLU
91
A
GLY
92
n
89
GLY
92
A
LEU
93
n
90
LEU
93
A
HIS
94
n
91
HIS
94
A
ASN
95
n
92
ASN
95
A
HIS
96
n
93
HIS
96
A
HIS
97
n
94
HIS
97
A
THR
98
n
95
THR
98
A
GLU
99
n
96
GLU
99
A
LYS
100
n
97
LYS
100
A
SER
101
n
98
SER
101
A
LEU
102
n
99
LEU
102
A
SER
103
n
100
SER
103
A
HIS
104
n
101
HIS
104
A
PRO
204
n
1
PRO
204
B
ALA
205
n
2
ALA
205
B
ALA
206
n
3
ALA
206
B
PRO
207
n
4
PRO
207
B
GLN
208
n
5
GLN
208
B
VAL
209
n
6
VAL
209
B
TYR
210
n
7
TYR
210
B
THR
211
n
8
THR
211
B
ILE
212
n
9
ILE
212
B
PRO
213
n
10
PRO
213
B
PRO
214
n
11
PRO
214
B
PRO
215
n
12
PRO
215
B
LEU
216
n
13
LEU
216
B
GLU
217
n
14
GLU
217
B
GLN
218
n
15
GLN
218
B
MET
219
n
16
MET
219
B
ALA
220
n
17
ALA
220
B
LYS
221
n
18
LYS
221
B
ASP
222
n
19
ASP
222
B
LEU
223
n
20
LEU
223
B
VAL
224
n
21
VAL
224
B
SER
225
n
22
SER
225
B
LEU
226
n
23
LEU
226
B
THR
227
n
24
THR
227
B
CYS
228
n
25
CYS
228
B
MET
229
n
26
MET
229
B
ILE
230
n
27
ILE
230
B
THR
231
n
28
THR
231
B
ASP
232
n
29
ASP
232
B
PHE
233
n
30
PHE
233
B
PHE
234
n
31
PHE
234
B
PRO
235
n
32
PRO
235
B
GLU
236
n
33
GLU
236
B
ASP
237
n
34
ASP
237
B
ILE
238
n
35
ILE
238
B
THR
239
n
36
THR
239
B
VAL
240
n
37
VAL
240
B
GLU
241
n
38
GLU
241
B
TRP
242
n
39
TRP
242
B
GLN
243
n
40
GLN
243
B
TRP
244
n
41
TRP
244
B
ASN
245
n
42
ASN
245
B
GLY
246
n
43
GLY
246
B
GLN
247
n
44
GLN
247
B
PRO
248
n
45
PRO
248
B
ALA
249
n
46
ALA
249
B
GLU
250
n
47
GLU
250
B
ASN
251
n
48
ASN
251
B
TYR
252
n
49
TYR
252
B
LYS
253
n
50
LYS
253
B
ASN
254
n
51
ASN
254
B
THR
255
n
52
THR
255
B
GLN
256
n
53
GLN
256
B
PRO
257
n
54
PRO
257
B
ILE
258
n
55
ILE
258
B
MET
259
n
56
MET
259
B
ASP
260
n
57
ASP
260
B
THR
261
n
58
THR
261
B
ASP
262
n
59
ASP
262
B
GLY
263
n
60
GLY
263
B
SER
264
n
61
SER
264
B
TYR
265
n
62
TYR
265
B
PHE
266
n
63
PHE
266
B
VAL
267
n
64
VAL
267
B
TYR
268
n
65
TYR
268
B
SER
269
n
66
SER
269
B
LYS
270
n
67
LYS
270
B
LEU
271
n
68
LEU
271
B
ASN
272
n
69
ASN
272
B
VAL
273
n
70
VAL
273
B
GLN
274
n
71
GLN
274
B
LYS
275
n
72
LYS
275
B
SER
276
n
73
SER
276
B
ASN
277
n
74
ASN
277
B
TRP
278
n
75
TRP
278
B
GLU
279
n
76
GLU
279
B
ALA
280
n
77
ALA
280
B
GLY
281
n
78
GLY
281
B
ASN
282
n
79
ASN
282
B
THR
283
n
80
THR
283
B
PHE
284
n
81
PHE
284
B
THR
285
n
82
THR
285
B
CYS
286
n
83
CYS
286
B
SER
287
n
84
SER
287
B
VAL
288
n
85
VAL
288
B
LEU
289
n
86
LEU
289
B
HIS
290
n
87
HIS
290
B
GLU
291
n
88
GLU
291
B
GLY
292
n
89
GLY
292
B
LEU
293
n
90
LEU
293
B
HIS
294
n
91
HIS
294
B
ASN
295
n
92
ASN
295
B
HIS
296
n
93
HIS
296
B
HIS
297
n
94
HIS
297
B
THR
298
n
95
THR
298
B
GLU
299
n
96
GLU
299
B
LYS
300
n
97
LYS
300
B
SER
301
n
98
SER
301
B
LEU
302
n
99
LEU
302
B
SER
303
n
100
SER
303
B
HIS
304
n
101
HIS
304
B
author_and_software_defined_assembly
PISA
2
dimeric
2260
-13
9970
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
ILE
12
A
N
ILE
9
A
O
THR
27
A
O
THR
24
A
O
PHE
33
A
O
PHE
30
A
N
TYR
65
A
N
TYR
62
A
N
LYS
70
A
N
LYS
67
A
O
LYS
53
A
O
LYS
50
A
N
ILE
12
A
N
ILE
9
A
O
THR
27
A
O
THR
24
A
O
PHE
33
A
O
PHE
30
A
N
TYR
65
A
N
TYR
62
A
O
PHE
66
A
O
PHE
63
A
N
ILE
58
A
N
ILE
55
A
O
GLN
47
A
O
GLN
44
A
N
TRP
44
A
N
TRP
41
A
N
GLN
43
A
N
GLN
40
A
O
THR
85
A
O
THR
82
A
N
VAL
88
A
N
VAL
85
A
O
THR
98
A
O
THR
95
B
N
ILE
212
B
N
ILE
9
B
O
THR
227
B
O
THR
24
B
O
PHE
233
B
O
PHE
30
B
N
TYR
265
B
N
TYR
62
B
N
LYS
270
B
N
LYS
67
B
O
LYS
253
B
O
LYS
50
B
N
ILE
212
B
N
ILE
9
B
O
THR
227
B
O
THR
24
B
O
PHE
233
B
O
PHE
30
B
N
TYR
265
B
N
TYR
62
B
O
PHE
266
B
O
PHE
63
B
N
ILE
258
B
N
ILE
55
B
O
GLN
247
B
O
GLN
44
B
N
TRP
244
B
N
TRP
41
B
O
GLN
243
B
O
GLN
40
B
N
THR
285
B
N
THR
82
B
N
VAL
288
B
N
VAL
85
B
O
THR
298
B
O
THR
95
0.2486
0.1963
2.2
8.0
496
10088
9447
92.5
RANDOM
1
2.0
Engh & Huber
2.2
8.0
77
1699
0
0
1622
0.007
1.35
31.8
2.2
50
1CQK
10340
2.0
0.104
1
10.1
5.58
93.4
0.273
2.20
2.26
705
3.8
83.6
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
refinement
X-PLOR
3.1
CH3 DOMAIN OF MAK33 ANTIBODY
CRYSTAL STRUCTURE OF THE CH3 DOMAIN FROM THE MAK33 ANTIBODY
1
N
N
1
N
N
2
N
N
2
N
N
The biological assembly is a dimer.
A
PRO
15
A
PRO
12
HELX_P
A
MET
19
A
MET
16
5
1
5
A
LYS
75
A
LYS
72
HELX_P
A
ALA
80
A
ALA
77
1
2
6
A
LEU
93
A
LEU
90
HELX_P
A
ASN
95
A
ASN
92
5
3
3
B
PRO
215
B
PRO
12
HELX_P
B
MET
219
B
MET
16
5
4
5
B
LYS
275
B
LYS
72
HELX_P
B
ALA
280
B
ALA
77
1
5
6
B
LEU
293
B
LEU
90
HELX_P
B
ASN
295
B
ASN
92
5
6
3
disulf
2.313
A
CYS
28
A
SG
CYS
25
1_555
A
CYS
86
A
SG
CYS
83
1_555
disulf
2.385
B
CYS
228
B
SG
CYS
25
1_555
B
CYS
286
B
SG
CYS
83
1_555
IMMUNE SYSTEM
CONSTANT DOMAIN, C1-SUBSET, IMMUNOGLOBULIN, Immune system
A
PHE
34
A
PHE
31
1
A
PRO
35
A
PRO
32
-0.59
B
PHE
234
B
PHE
31
1
B
PRO
235
B
PRO
32
-0.10
Q9R1A4_MOUSE
UNP
1
Q9R1A4
353
453
1CQK
4
104
Q9R1A4
A
1
1
101
353
453
1CQK
204
304
Q9R1A4
B
1
1
101
1
LYS
ENGINEERED MUTATION
ALA
5
1CQK
A
Q9R1A4
UNP
354
2
1
LYS
ENGINEERED MUTATION
LEU
16
1CQK
A
Q9R1A4
UNP
365
13
1
LYS
ENGINEERED MUTATION
LEU
23
1CQK
A
Q9R1A4
UNP
372
20
2
LYS
ENGINEERED MUTATION
ALA
205
1CQK
B
Q9R1A4
UNP
354
2
2
LYS
ENGINEERED MUTATION
LEU
216
1CQK
B
Q9R1A4
UNP
365
13
2
LYS
ENGINEERED MUTATION
LEU
223
1CQK
B
Q9R1A4
UNP
372
20
4
4
4
4
4
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLN
8
A
GLN
5
A
ILE
12
A
ILE
9
A
LEU
23
A
LEU
20
A
PHE
33
A
PHE
30
A
TYR
65
A
TYR
62
A
GLN
74
A
GLN
71
A
TYR
52
A
TYR
49
A
ASN
54
A
ASN
51
A
GLN
8
A
GLN
5
A
ILE
12
A
ILE
9
A
LEU
23
A
LEU
20
A
PHE
33
A
PHE
30
A
TYR
65
A
TYR
62
A
GLN
74
A
GLN
71
A
ILE
58
A
ILE
55
A
MET
59
A
MET
56
A
GLN
47
A
GLN
44
A
PRO
48
A
PRO
45
A
THR
39
A
THR
36
A
TRP
44
A
TRP
41
A
PHE
84
A
PHE
81
A
LEU
89
A
LEU
86
A
HIS
97
A
HIS
94
A
LEU
102
A
LEU
99
B
GLN
208
B
GLN
5
B
ILE
212
B
ILE
9
B
LEU
223
B
LEU
20
B
PHE
233
B
PHE
30
B
TYR
265
B
TYR
62
B
GLN
274
B
GLN
71
B
TYR
252
B
TYR
49
B
ASN
254
B
ASN
51
B
GLN
208
B
GLN
5
B
ILE
212
B
ILE
9
B
LEU
223
B
LEU
20
B
PHE
233
B
PHE
30
B
TYR
265
B
TYR
62
B
GLN
274
B
GLN
71
B
ILE
258
B
ILE
55
B
MET
259
B
MET
56
B
GLN
247
B
GLN
44
B
PRO
248
B
PRO
45
B
THR
239
B
THR
36
B
TRP
244
B
TRP
41
B
THR
283
B
THR
80
B
LEU
289
B
LEU
86
B
HIS
297
B
HIS
94
B
SER
303
B
SER
100
4
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