1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Suri, A.K.
Mao, B.
Amin, S.
Geacintov, N.E.
Patel, D.J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C22 H18 O3
330.377
BENZO[G]CHRYSENE
non-polymer
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
292
289
307
10.1006/jmbi.1999.2974
10493876
Solution conformation of the (+)-trans-anti-benzo[g]chrysene-dA adduct opposite dT in a DNA duplex.
1999
10.2210/pdb1cr3/pdb
pdb_00001cr3
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
C14 ATOM OF BC-ADDUCT LINKED TO N6 ATOM OF DA6
3220.111
DNA (5'-D(*CP*TP*CP*TP*CP*AP*CP*TP*TP*CP*C)-3')
1
syn
polymer
3487.297
DNA (5'-D(*GP*GP*AP*AP*GP*TP*GP*AP*GP*AP*G)-3')
1
syn
polymer
330.377
BENZO[G]CHRYSENE
1
syn
non-polymer
BENZO[G]CHRYSENE ADDUCT
no
no
(DC)(DT)(DC)(DT)(DC)(DA)(DC)(DT)(DT)(DC)(DC)
CTCTCACTTCC
A
polydeoxyribonucleotide
no
no
(DG)(DG)(DA)(DA)(DG)(DT)(DG)(DA)(DG)(DA)(DG)
GGAAGTGAGAG
B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
10.481
1
19
A
1
B
22
-2.106
A_DC1:DG22_B
1
-12.793
0.066
-1.079
-0.017
-9.731
1
20
A
2
B
21
4.178
A_DT2:DA21_B
2
0.423
0.597
1.063
-0.293
-14.963
1
19
A
3
B
20
-9.420
A_DC3:DG20_B
3
-3.588
-0.237
0.803
0.141
4.382
1
20
A
4
B
19
-1.478
A_DT4:DA19_B
4
10.917
-0.383
0.543
0.024
24.526
1
19
A
5
B
18
-0.792
A_DC5:DG18_B
5
-0.985
1.145
-0.049
-0.167
-18.159
1
20
A
6
B
17
-1.739
A_DA6:DT17_B
6
9.521
0.032
-0.096
0.052
-7.945
1
19
A
7
B
16
-6.577
A_DC7:DG16_B
7
-10.673
0.183
0.275
0.164
-19.169
1
20
A
8
B
15
-4.632
A_DT8:DA15_B
8
-10.123
-0.711
-0.120
0.060
-2.110
1
20
A
9
B
14
-3.311
A_DT9:DA14_B
9
-13.337
-0.501
-0.482
0.070
-2.141
1
19
A
10
B
13
-4.261
A_DC10:DG13_B
10
13.779
-0.084
0.065
0.207
17.035
1
19
A
11
B
12
-9.223
A_DC11:DG12_B
11
3.594
-0.506
-0.361
0.086
4.452
42.522
A
A
1
2
48.331
B
B
22
21
4.625
31.121
0.186
1.980
AA_DC1DT2:DA21DG22_BB
1
-9.151
14.212
27.872
-2.665
-1.842
2.883
34.571
A
A
2
3
34.734
B
B
21
20
3.529
19.475
-0.605
-0.013
AA_DT2DC3:DG20DA21_BB
2
2.492
-4.445
28.595
-3.272
1.434
3.422
29.374
A
A
3
4
0.992
B
B
20
19
3.438
0.502
0.398
1.373
AA_DC3DT4:DA19DG20_BB
3
-2.234
4.411
29.286
2.594
-1.289
2.708
34.536
A
A
4
5
20.383
B
B
19
18
2.916
11.737
-0.181
0.303
AA_DT4DC5:DG18DA19_BB
4
8.844
-15.358
31.340
-1.133
1.543
7.407
32.508
A
A
5
6
12.709
B
B
18
17
7.169
7.023
-0.313
2.176
AA_DC5DA6:DT17DG18_BB
5
-5.865
10.613
31.227
1.090
-1.777
3.087
31.134
A
A
6
7
10.427
B
B
17
16
3.089
5.562
-0.980
-0.123
AA_DA6DC7:DG16DT17_BB
6
-2.477
4.643
30.547
-1.243
1.376
4.202
35.535
A
A
7
8
-2.574
B
B
16
15
4.214
-1.571
0.034
0.193
AA_DC7DT8:DA15DG16_BB
7
0.692
-1.135
35.495
0.611
0.075
3.135
30.363
A
A
8
9
11.101
B
B
15
14
2.969
5.778
-0.739
0.986
AA_DT8DT9:DA14DA15_BB
8
-1.608
3.089
29.778
0.788
1.106
3.597
39.801
A
A
9
10
15.352
B
B
14
13
3.606
10.324
0.154
0.554
AA_DT9DC10:DG13DA14_BB
9
-3.999
5.947
38.290
-0.532
-0.748
2.764
27.789
A
A
10
11
2.585
B
B
13
12
2.915
1.232
-0.692
1.256
AA_DC10DC11:DG12DG13_BB
10
5.778
-12.121
27.165
2.355
2.661
database_2
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
1
0
2000-02-18
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
1999-08-12
REL
BC
BENZO[G]CHRYSENE
SYNTHETIC: YES
sample
BACK CALCULATED DATA AGREE WITH EXPERIMENTAL NOESY SPECTRUM,STRUCTURES WITH
ACCEPTABLE COVALENT GEOMETRY,STRUCTURES WITH FAVORABLE NON-BOND ENERGY
10
7
2D NOESY
7.0
298
K
REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE.
1
lowest energy
refinement
X-PLOR
3.1
600
Varian
BC
23
3
BC
BC
23
A
C
1
n
1
DC
1
A
T
2
n
2
DT
2
A
C
3
n
3
DC
3
A
T
4
n
4
DT
4
A
C
5
n
5
DC
5
A
A
6
n
6
DA
6
A
C
7
n
7
DC
7
A
T
8
n
8
DT
8
A
T
9
n
9
DT
9
A
C
10
n
10
DC
10
A
C
11
n
11
DC
11
A
G
12
n
1
DG
12
B
G
13
n
2
DG
13
B
A
14
n
3
DA
14
B
A
15
n
4
DA
15
B
G
16
n
5
DG
16
B
T
17
n
6
DT
17
B
G
18
n
7
DG
18
B
A
19
n
8
DA
19
B
G
20
n
9
DG
20
B
A
21
n
10
DA
21
B
G
22
n
11
DG
22
B
author_defined_assembly
2
dimeric
A
DA
6
ADUCT FORMATION
A
DA
6
DA
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
1.85
0.30
108.30
110.15
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
1
4.14
0.30
108.30
112.44
A
A
A
O4'
C1'
N1
DC
DC
DC
3
3
3
N
1
4.27
0.70
118.00
122.27
A
A
A
N3
C4
N4
DC
DC
DC
3
3
3
N
1
-4.27
0.50
117.70
113.43
A
A
A
C5
C6
N1
DA
DA
DA
6
6
6
N
1
4.78
0.60
118.60
123.38
A
A
A
N1
C6
N6
DA
DA
DA
6
6
6
N
1
5.24
0.30
108.30
113.54
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
1
5.10
0.70
118.00
123.10
A
A
A
N3
C4
N4
DC
DC
DC
11
11
11
N
1
5.85
0.30
108.30
114.15
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
1
6.16
0.70
119.90
126.06
B
B
B
N3
C2
N2
DG
DG
DG
12
12
12
N
1
3.80
0.60
119.90
123.70
B
B
B
N1
C6
O6
DG
DG
DG
12
12
12
N
1
5.00
0.30
108.30
113.30
B
B
B
O4'
C1'
N9
DG
DG
DG
13
13
13
N
1
5.67
0.70
119.90
125.57
B
B
B
N3
C2
N2
DG
DG
DG
13
13
13
N
1
1.98
0.30
108.30
110.28
B
B
B
O4'
C1'
N9
DA
DA
DA
14
14
14
N
1
7.10
0.60
118.60
125.70
B
B
B
N1
C6
N6
DA
DA
DA
14
14
14
N
1
4.58
0.30
108.30
112.88
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
1
6.73
0.60
118.60
125.33
B
B
B
N1
C6
N6
DA
DA
DA
15
15
15
N
1
6.67
0.70
119.90
126.57
B
B
B
N3
C2
N2
DG
DG
DG
16
16
16
N
1
3.80
0.60
119.00
122.80
B
B
B
C4
C5
C7
DT
DT
DT
17
17
17
N
1
-6.30
0.60
122.90
116.60
B
B
B
C6
C5
C7
DT
DT
DT
17
17
17
N
1
5.06
0.70
119.90
124.96
B
B
B
N3
C2
N2
DG
DG
DG
18
18
18
N
1
3.73
0.30
108.30
112.03
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
1
6.85
0.60
118.60
125.45
B
B
B
N1
C6
N6
DA
DA
DA
19
19
19
N
1
6.62
0.70
119.90
126.52
B
B
B
N3
C2
N2
DG
DG
DG
20
20
20
N
1
-3.23
0.50
117.70
114.47
B
B
B
C5
C6
N1
DA
DA
DA
21
21
21
N
1
6.35
0.60
118.60
124.95
B
B
B
N1
C6
N6
DA
DA
DA
21
21
21
N
1
6.26
0.70
119.90
126.16
B
B
B
N3
C2
N2
DG
DG
DG
22
22
22
N
2
3.66
0.30
108.30
111.96
A
A
A
O4'
C1'
N1
DC
DC
DC
3
3
3
N
2
-2.41
0.40
121.90
119.49
A
A
A
N3
C4
C5
DC
DC
DC
3
3
3
N
2
4.41
0.70
118.00
122.41
A
A
A
N3
C4
N4
DC
DC
DC
3
3
3
N
2
2.49
0.30
108.30
110.79
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
2
-4.34
0.50
117.70
113.36
A
A
A
C5
C6
N1
DA
DA
DA
6
6
6
N
2
3.92
0.60
118.60
122.52
A
A
A
N1
C6
N6
DA
DA
DA
6
6
6
N
2
1.94
0.30
108.30
110.24
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
2
2.66
0.30
108.30
110.96
A
A
A
O4'
C1'
N1
DT
DT
DT
9
9
9
N
2
4.47
0.70
118.00
122.47
A
A
A
N3
C4
N4
DC
DC
DC
11
11
11
N
2
4.44
0.30
108.30
112.74
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
2
6.61
0.70
119.90
126.51
B
B
B
N3
C2
N2
DG
DG
DG
12
12
12
N
2
3.64
0.60
119.90
123.54
B
B
B
N1
C6
O6
DG
DG
DG
12
12
12
N
2
6.11
0.70
119.90
126.01
B
B
B
N3
C2
N2
DG
DG
DG
13
13
13
N
2
2.01
0.30
108.30
110.31
B
B
B
O4'
C1'
N9
DA
DA
DA
14
14
14
N
2
6.55
0.60
118.60
125.15
B
B
B
N1
C6
N6
DA
DA
DA
14
14
14
N
2
4.15
0.30
108.30
112.45
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
2
6.20
0.60
118.60
124.80
B
B
B
N1
C6
N6
DA
DA
DA
15
15
15
N
2
6.55
0.70
119.90
126.45
B
B
B
N3
C2
N2
DG
DG
DG
16
16
16
N
2
4.19
0.60
119.90
124.09
B
B
B
N1
C6
O6
DG
DG
DG
16
16
16
N
2
-5.64
0.60
122.90
117.26
B
B
B
C6
C5
C7
DT
DT
DT
17
17
17
N
2
5.76
0.70
119.90
125.66
B
B
B
N3
C2
N2
DG
DG
DG
18
18
18
N
2
3.78
0.60
119.90
123.68
B
B
B
N1
C6
O6
DG
DG
DG
18
18
18
N
2
2.81
0.30
108.30
111.11
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
2
7.01
0.60
118.60
125.61
B
B
B
N1
C6
N6
DA
DA
DA
19
19
19
N
2
6.57
0.70
119.90
126.47
B
B
B
N3
C2
N2
DG
DG
DG
20
20
20
N
2
6.89
0.60
118.60
125.49
B
B
B
N1
C6
N6
DA
DA
DA
21
21
21
N
2
6.25
0.70
119.90
126.15
B
B
B
N3
C2
N2
DG
DG
DG
22
22
22
N
3
3.76
0.30
108.30
112.06
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
3
3.31
0.30
108.30
111.61
A
A
A
O4'
C1'
N1
DC
DC
DC
3
3
3
N
3
-2.52
0.40
121.90
119.38
A
A
A
N3
C4
C5
DC
DC
DC
3
3
3
N
3
4.20
0.70
118.00
122.20
A
A
A
N3
C4
N4
DC
DC
DC
3
3
3
N
3
2.14
0.30
108.30
110.44
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
3
-3.94
0.50
117.70
113.76
A
A
A
C5
C6
N1
DA
DA
DA
6
6
6
N
3
3.72
0.60
118.60
122.32
A
A
A
N1
C6
N6
DA
DA
DA
6
6
6
N
3
4.34
0.70
118.00
122.34
A
A
A
N3
C4
N4
DC
DC
DC
7
7
7
N
3
5.04
0.70
118.00
123.04
A
A
A
N3
C4
N4
DC
DC
DC
11
11
11
N
3
6.08
0.30
108.30
114.38
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
3
6.10
0.70
119.90
126.00
B
B
B
N3
C2
N2
DG
DG
DG
12
12
12
N
3
4.20
0.60
119.90
124.10
B
B
B
N1
C6
O6
DG
DG
DG
12
12
12
N
3
-3.92
0.60
128.60
124.68
B
B
B
C5
C6
O6
DG
DG
DG
12
12
12
N
3
2.08
0.30
108.30
110.38
B
B
B
O4'
C1'
N9
DG
DG
DG
13
13
13
N
3
6.34
0.70
119.90
126.24
B
B
B
N3
C2
N2
DG
DG
DG
13
13
13
N
3
3.71
0.30
108.30
112.01
B
B
B
O4'
C1'
N9
DA
DA
DA
14
14
14
N
3
5.81
0.60
118.60
124.41
B
B
B
N1
C6
N6
DA
DA
DA
14
14
14
N
3
6.62
0.30
108.30
114.92
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
3
6.15
0.60
118.60
124.75
B
B
B
N1
C6
N6
DA
DA
DA
15
15
15
N
3
1.98
0.30
108.30
110.28
B
B
B
O4'
C1'
N9
DG
DG
DG
16
16
16
N
3
6.49
0.70
119.90
126.39
B
B
B
N3
C2
N2
DG
DG
DG
16
16
16
N
3
3.90
0.60
119.90
123.80
B
B
B
N1
C6
O6
DG
DG
DG
16
16
16
N
3
3.77
0.60
119.00
122.77
B
B
B
C4
C5
C7
DT
DT
DT
17
17
17
N
3
-6.48
0.60
122.90
116.42
B
B
B
C6
C5
C7
DT
DT
DT
17
17
17
N
3
5.59
0.70
119.90
125.49
B
B
B
N3
C2
N2
DG
DG
DG
18
18
18
N
3
4.05
0.30
108.30
112.35
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
3
7.09
0.60
118.60
125.69
B
B
B
N1
C6
N6
DA
DA
DA
19
19
19
N
3
6.14
0.70
119.90
126.04
B
B
B
N3
C2
N2
DG
DG
DG
20
20
20
N
3
3.64
0.60
119.90
123.54
B
B
B
N1
C6
O6
DG
DG
DG
20
20
20
N
3
5.25
0.30
108.30
113.55
B
B
B
O4'
C1'
N9
DA
DA
DA
21
21
21
N
3
-3.03
0.50
117.70
114.67
B
B
B
C5
C6
N1
DA
DA
DA
21
21
21
N
3
6.92
0.60
118.60
125.52
B
B
B
N1
C6
N6
DA
DA
DA
21
21
21
N
3
6.23
0.70
119.90
126.13
B
B
B
N3
C2
N2
DG
DG
DG
22
22
22
N
4
2.44
0.30
108.30
110.74
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
4
8.20
0.30
108.30
116.50
A
A
A
O4'
C1'
N1
DC
DC
DC
3
3
3
N
4
4.48
0.70
118.00
122.48
A
A
A
N3
C4
N4
DC
DC
DC
3
3
3
N
4
3.39
0.30
108.30
111.69
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
4
-4.13
0.50
117.70
113.57
A
A
A
C5
C6
N1
DA
DA
DA
6
6
6
N
4
4.51
0.60
118.60
123.11
A
A
A
N1
C6
N6
DA
DA
DA
6
6
6
N
4
2.30
0.30
108.30
110.60
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
4
4.54
0.70
118.00
122.54
A
A
A
N3
C4
N4
DC
DC
DC
11
11
11
N
4
4.10
0.30
108.30
112.40
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
4
6.77
0.70
119.90
126.67
B
B
B
N3
C2
N2
DG
DG
DG
12
12
12
N
4
3.66
0.60
119.90
123.56
B
B
B
N1
C6
O6
DG
DG
DG
12
12
12
N
4
1.82
0.30
108.30
110.12
B
B
B
O4'
C1'
N9
DG
DG
DG
13
13
13
N
4
5.53
0.70
119.90
125.43
B
B
B
N3
C2
N2
DG
DG
DG
13
13
13
N
4
3.69
0.60
119.90
123.59
B
B
B
N1
C6
O6
DG
DG
DG
13
13
13
N
4
5.83
0.60
118.60
124.43
B
B
B
N1
C6
N6
DA
DA
DA
14
14
14
N
4
7.41
0.60
118.60
126.01
B
B
B
N1
C6
N6
DA
DA
DA
15
15
15
N
4
2.48
0.30
108.30
110.78
B
B
B
O4'
C1'
N9
DG
DG
DG
16
16
16
N
4
7.16
0.70
119.90
127.06
B
B
B
N3
C2
N2
DG
DG
DG
16
16
16
N
4
3.83
0.60
119.90
123.73
B
B
B
N1
C6
O6
DG
DG
DG
16
16
16
N
4
2.59
0.30
108.30
110.89
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
4
3.66
0.60
119.00
122.66
B
B
B
C4
C5
C7
DT
DT
DT
17
17
17
N
4
-6.40
0.60
122.90
116.50
B
B
B
C6
C5
C7
DT
DT
DT
17
17
17
N
4
5.68
0.70
119.90
125.58
B
B
B
N3
C2
N2
DG
DG
DG
18
18
18
N
4
2.28
0.30
108.30
110.58
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
4
6.29
0.60
118.60
124.89
B
B
B
N1
C6
N6
DA
DA
DA
19
19
19
N
4
7.03
0.70
119.90
126.93
B
B
B
N3
C2
N2
DG
DG
DG
20
20
20
N
4
-3.23
0.50
117.70
114.47
B
B
B
C5
C6
N1
DA
DA
DA
21
21
21
N
4
6.53
0.60
118.60
125.13
B
B
B
N1
C6
N6
DA
DA
DA
21
21
21
N
4
6.16
0.70
119.90
126.06
B
B
B
N3
C2
N2
DG
DG
DG
22
22
22
N
5
4.63
0.30
108.30
112.93
A
A
A
O4'
C1'
N1
DC
DC
DC
3
3
3
N
5
-4.38
0.50
117.70
113.32
A
A
A
C5
C6
N1
DA
DA
DA
6
6
6
N
5
4.23
0.60
118.60
122.83
A
A
A
N1
C6
N6
DA
DA
DA
6
6
6
N
5
2.02
0.30
108.30
110.32
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
5
3.24
0.30
108.30
111.54
A
A
A
O4'
C1'
N1
DT
DT
DT
9
9
9
N
5
4.23
0.30
108.30
112.53
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
5
-3.64
0.60
123.90
120.26
B
B
B
N1
C2
N3
DG
DG
DG
12
12
12
N
5
7.04
0.70
119.90
126.94
B
B
B
N3
C2
N2
DG
DG
DG
12
12
12
N
5
3.15
0.30
108.30
111.45
B
B
B
O4'
C1'
N9
DG
DG
DG
13
13
13
N
5
5.92
0.70
119.90
125.82
B
B
B
N3
C2
N2
DG
DG
DG
13
13
13
N
5
-3.04
0.50
117.70
114.66
B
B
B
C5
C6
N1
DA
DA
DA
14
14
14
N
5
6.60
0.60
118.60
125.20
B
B
B
N1
C6
N6
DA
DA
DA
14
14
14
N
5
3.34
0.30
108.30
111.64
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
5
6.92
0.60
118.60
125.52
B
B
B
N1
C6
N6
DA
DA
DA
15
15
15
N
5
6.33
0.70
119.90
126.23
B
B
B
N3
C2
N2
DG
DG
DG
16
16
16
N
5
3.88
0.60
119.90
123.78
B
B
B
N1
C6
O6
DG
DG
DG
16
16
16
N
5
1.89
0.30
108.30
110.19
B
B
B
O4'
C1'
N1
DT
DT
DT
17
17
17
N
5
3.66
0.60
119.00
122.66
B
B
B
C4
C5
C7
DT
DT
DT
17
17
17
N
5
-6.12
0.60
122.90
116.78
B
B
B
C6
C5
C7
DT
DT
DT
17
17
17
N
5
5.29
0.70
119.90
125.19
B
B
B
N3
C2
N2
DG
DG
DG
18
18
18
N
5
3.12
0.30
108.30
111.42
B
B
B
O4'
C1'
N9
DA
DA
DA
19
19
19
N
5
-3.05
0.50
117.70
114.65
B
B
B
C5
C6
N1
DA
DA
DA
19
19
19
N
5
6.80
0.60
118.60
125.40
B
B
B
N1
C6
N6
DA
DA
DA
19
19
19
N
5
6.52
0.70
119.90
126.42
B
B
B
N3
C2
N2
DG
DG
DG
20
20
20
N
5
2.63
0.30
108.30
110.93
B
B
B
O4'
C1'
N9
DA
DA
DA
21
21
21
N
5
-3.26
0.50
117.70
114.44
B
B
B
C5
C6
N1
DA
DA
DA
21
21
21
N
5
5.97
0.60
118.60
124.57
B
B
B
N1
C6
N6
DA
DA
DA
21
21
21
N
5
6.05
0.70
119.90
125.95
B
B
B
N3
C2
N2
DG
DG
DG
22
22
22
N
6
2.58
0.30
108.30
110.88
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
6
13.75
1.20
119.70
133.45
A
A
A
C3'
O3'
P
DT
DT
DC
2
2
3
Y
6
5.59
0.30
108.30
113.89
A
A
A
O4'
C1'
N1
DC
DC
DC
3
3
3
N
6
-2.51
0.40
121.90
119.39
A
A
A
N3
C4
C5
DC
DC
DC
3
3
3
N
6
-4.24
0.50
117.70
113.46
A
A
A
C5
C6
N1
DA
DA
DA
6
6
6
N
6
4.40
0.60
118.60
123.00
A
A
A
N1
C6
N6
DA
DA
DA
6
6
6
N
6
5.38
0.30
108.30
113.68
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
6
2.25
0.30
108.30
110.55
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
6
11.04
1.20
119.70
130.74
A
A
A
C3'
O3'
P
DT
DT
DT
8
8
9
Y
6
4.76
0.70
118.00
122.76
A
A
A
N3
C4
N4
DC
DC
DC
11
11
11
N
6
5.29
0.30
108.30
113.59
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
6
6.35
0.70
119.90
126.25
B
B
B
N3
C2
N2
DG
DG
DG
12
12
12
N
6
3.90
0.60
119.90
123.80
B
B
B
N1
C6
O6
DG
DG
DG
12
12
12
N
6
4.08
0.30
108.30
112.38
B
B
B
O4'
C1'
N9
DG
DG
DG
13
13
13
N
6
5.95
0.70
119.90
125.85
B
B
B
N3
C2
N2
DG
DG
DG
13
13
13
N
6
-3.16
0.50
117.70
114.54
B
B
B
C5
C6
N1
DA
DA
DA
14
14
14
N
6
6.18
0.60
118.60
124.78
B
B
B
N1
C6
N6
DA
DA
DA
14
14
14
N
6
3.50
0.30
108.30
111.80
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
6
6.34
0.60
118.60
124.94
B
B
B
N1
C6
N6
DA
DA
DA
15
15
15
N
6
-2.55
0.40
106.40
103.85
B
B
B
C8
N9
C4
DG
DG
DG
16
16
16
N
6
7.61
0.70
119.90
127.51
B
B
B
N3
C2
N2
DG
DG
DG
16
16
16
N
6
10.83
1.20
119.70
130.53
B
B
B
C3'
O3'
P
DG
DG
DT
16
16
17
Y
6
-5.65
0.60
122.90
117.25
B
B
B
C6
C5
C7
DT
DT
DT
17
17
17
N
6
5.00
0.70
119.90
124.90
B
B
B
N3
C2
N2
DG
DG
DG
18
18
18
N
6
6.82
0.60
118.60
125.42
B
B
B
N1
C6
N6
DA
DA
DA
19
19
19
N
6
5.95
0.70
119.90
125.85
B
B
B
N3
C2
N2
DG
DG
DG
20
20
20
N
6
2.77
0.30
108.30
111.07
B
B
B
O4'
C1'
N9
DA
DA
DA
21
21
21
N
6
-3.09
0.50
117.70
114.61
B
B
B
C5
C6
N1
DA
DA
DA
21
21
21
N
6
6.38
0.60
118.60
124.98
B
B
B
N1
C6
N6
DA
DA
DA
21
21
21
N
6
2.08
0.30
108.30
110.38
B
B
B
O4'
C1'
N9
DG
DG
DG
22
22
22
N
6
6.61
0.70
119.90
126.51
B
B
B
N3
C2
N2
DG
DG
DG
22
22
22
N
6
3.84
0.60
119.90
123.74
B
B
B
N1
C6
O6
DG
DG
DG
22
22
22
N
6
-3.68
0.60
128.60
124.92
B
B
B
C5
C6
O6
DG
DG
DG
22
22
22
N
7
7.77
0.30
108.30
116.07
A
A
A
O4'
C1'
N1
DC
DC
DC
3
3
3
N
7
4.40
0.70
118.00
122.40
A
A
A
N3
C4
N4
DC
DC
DC
3
3
3
N
7
2.77
0.30
108.30
111.07
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
7
-4.15
0.50
117.70
113.55
A
A
A
C5
C6
N1
DA
DA
DA
6
6
6
N
7
4.36
0.70
118.00
122.36
A
A
A
N3
C4
N4
DC
DC
DC
7
7
7
N
7
3.34
0.30
108.30
111.64
A
A
A
O4'
C1'
N1
DT
DT
DT
8
8
8
N
7
2.08
0.30
108.30
110.38
A
A
A
O4'
C1'
N1
DT
DT
DT
9
9
9
N
7
4.81
0.70
118.00
122.81
A
A
A
N3
C4
N4
DC
DC
DC
11
11
11
N
7
3.52
0.30
108.30
111.82
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
7
-3.65
0.60
123.90
120.25
B
B
B
N1
C2
N3
DG
DG
DG
12
12
12
N
7
6.78
0.70
119.90
126.68
B
B
B
N3
C2
N2
DG
DG
DG
12
12
12
N
7
4.00
0.60
119.90
123.90
B
B
B
N1
C6
O6
DG
DG
DG
12
12
12
N
7
-3.85
0.60
128.60
124.75
B
B
B
C5
C6
O6
DG
DG
DG
12
12
12
N
7
6.68
0.70
119.90
126.58
B
B
B
N3
C2
N2
DG
DG
DG
13
13
13
N
7
4.12
0.30
108.30
112.42
B
B
B
O4'
C1'
N9
DA
DA
DA
14
14
14
N
7
-3.26
0.50
117.70
114.44
B
B
B
C5
C6
N1
DA
DA
DA
14
14
14
N
7
5.48
0.60
118.60
124.08
B
B
B
N1
C6
N6
DA
DA
DA
14
14
14
N
7
6.03
0.30
108.30
114.33
B
B
B
O4'
C1'
N9
DA
DA
DA
15
15
15
N
7
5.86
0.60
118.60
124.46
B
B
B
N1
C6
N6
DA
DA
DA
15
15
15
N
7
6.56
0.70
119.90
126.46
B
B
B
N3
C2
N2
DG
DG
DG
16
16
16
N
7
3.90
0.60
119.90
123.80
B
B
B
N1
C6
O6
DG
DG
DG
16
16
16
N
7
3.69
0.60
119.00
122.69
B
B
B
C4
C5
C7
DT
DT
DT
17
17
17
N
7
-6.26
0.60
122.90
116.64
B
B
B
C6
C5
C7
DT
DT
DT
17
17
17
N
7
5.25
0.70
119.90
125.15
B
B
B
N3
C2
N2
DG
DG
DG
18
18
18
N
7
3.93
0.60
119.90
123.83
B
B
B
N1
C6
O6
DG
DG
DG
18
18
18
N
7
6.73
0.60
118.60
125.33
B
B
B
N1
C6
N6
DA
DA
DA
19
19
19
N
7
6.30
0.70
119.90
126.20
B
B
B
N3
C2
N2
DG
DG
DG
20
20
20
N
7
-3.12
0.50
117.70
114.58
B
B
B
C5
C6
N1
DA
DA
DA
21
21
21
N
7
6.52
0.60
118.60
125.12
B
B
B
N1
C6
N6
DA
DA
DA
21
21
21
N
7
6.10
0.70
119.90
126.00
B
B
B
N3
C2
N2
DG
DG
DG
22
22
22
N
1
A
A
N1
C2
DT
DT
4
4
0.054
0.008
1.376
1.430
N
1
A
A
C6
N6
DA
DA
6
6
0.049
0.008
1.335
1.384
N
1
A
A
N1
C2
DT
DT
8
8
0.055
0.008
1.376
1.431
N
1
A
A
N1
C2
DT
DT
9
9
0.054
0.008
1.376
1.430
N
1
B
B
N1
C2
DT
DT
17
17
0.058
0.008
1.376
1.434
N
2
A
A
N1
C2
DT
DT
2
2
0.049
0.008
1.376
1.425
N
2
A
A
N1
C2
DT
DT
4
4
0.054
0.008
1.376
1.430
N
2
A
A
C6
N6
DA
DA
6
6
0.050
0.008
1.335
1.385
N
2
A
A
N1
C2
DT
DT
8
8
0.054
0.008
1.376
1.430
N
2
B
B
N1
C2
DT
DT
17
17
0.055
0.008
1.376
1.431
N
3
A
A
N1
C2
DT
DT
4
4
0.051
0.008
1.376
1.427
N
3
A
A
C6
N6
DA
DA
6
6
0.049
0.008
1.335
1.384
N
3
A
A
N1
C2
DT
DT
8
8
0.051
0.008
1.376
1.427
N
3
A
A
N1
C2
DT
DT
9
9
0.051
0.008
1.376
1.427
N
3
B
B
N1
C2
DT
DT
17
17
0.059
0.008
1.376
1.435
N
4
A
A
N1
C2
DT
DT
4
4
0.055
0.008
1.376
1.431
N
4
A
A
C6
N6
DA
DA
6
6
0.051
0.008
1.335
1.386
N
4
A
A
N1
C2
DT
DT
8
8
0.052
0.008
1.376
1.428
N
4
A
A
N1
C2
DT
DT
9
9
0.051
0.008
1.376
1.427
N
4
B
B
N1
C2
DT
DT
17
17
0.063
0.008
1.376
1.439
N
4
B
B
C2
N3
DT
DT
17
17
0.053
0.008
1.373
1.426
N
5
A
A
N1
C2
DT
DT
4
4
0.054
0.008
1.376
1.430
N
5
A
A
C6
N6
DA
DA
6
6
0.051
0.008
1.335
1.386
N
5
A
A
N1
C2
DT
DT
8
8
0.052
0.008
1.376
1.428
N
5
B
B
N1
C2
DT
DT
17
17
0.056
0.008
1.376
1.432
N
6
A
A
N1
C2
DT
DT
2
2
0.051
0.008
1.376
1.427
N
6
A
A
N1
C2
DT
DT
4
4
0.051
0.008
1.376
1.427
N
6
A
A
N1
C2
DT
DT
8
8
0.053
0.008
1.376
1.429
N
6
A
A
N1
C2
DT
DT
9
9
0.050
0.008
1.376
1.426
N
6
B
B
C2
N3
DG
DG
16
16
0.052
0.008
1.323
1.375
N
6
B
B
N9
C4
DG
DG
16
16
0.051
0.008
1.375
1.426
N
6
B
B
N1
C2
DT
DT
17
17
0.056
0.008
1.376
1.432
N
7
A
A
N1
C2
DT
DT
4
4
0.059
0.008
1.376
1.435
N
7
A
A
C2
N3
DT
DT
4
4
0.048
0.008
1.373
1.421
N
7
A
A
C6
N6
DA
DA
6
6
0.048
0.008
1.335
1.383
N
7
A
A
N1
C2
DT
DT
8
8
0.054
0.008
1.376
1.430
N
7
B
B
N1
C2
DT
DT
17
17
0.057
0.008
1.376
1.433
N
SOLUTION CONFORMATION OF THE (+)TRANS-ANTI-BENZO[G]CHRYSENE-DA ADDUCT OPPOSITE DT IN A DNA DUPLEX
1
N
N
2
N
N
3
N
N
covale
ADUCT FORMATION
1.539
none
A
DA
6
A
N6
DA
6
1_555
A
BC
23
C
C14
BC
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
B
DG
22
B
N1
DG
11
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
B
DG
22
B
O6
DG
11
1_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
B
DG
22
B
N2
DG
11
1_555
hydrog
WATSON-CRICK
A
DT
2
A
N3
DT
2
1_555
B
DA
21
B
N1
DA
10
1_555
hydrog
WATSON-CRICK
A
DT
2
A
O4
DT
2
1_555
B
DA
21
B
N6
DA
10
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N3
DC
3
1_555
B
DG
20
B
N1
DG
9
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N4
DC
3
1_555
B
DG
20
B
O6
DG
9
1_555
hydrog
WATSON-CRICK
A
DC
3
A
O2
DC
3
1_555
B
DG
20
B
N2
DG
9
1_555
hydrog
WATSON-CRICK
A
DT
4
A
N3
DT
4
1_555
B
DA
19
B
N1
DA
8
1_555
hydrog
WATSON-CRICK
A
DT
4
A
O4
DT
4
1_555
B
DA
19
B
N6
DA
8
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N3
DC
5
1_555
B
DG
18
B
N1
DG
7
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N4
DC
5
1_555
B
DG
18
B
O6
DG
7
1_555
hydrog
WATSON-CRICK
A
DC
5
A
O2
DC
5
1_555
B
DG
18
B
N2
DG
7
1_555
hydrog
WATSON-CRICK
A
DA
6
A
N1
DA
6
1_555
B
DT
17
B
N3
DT
6
1_555
hydrog
WATSON-CRICK
A
DA
6
A
N6
DA
6
1_555
B
DT
17
B
O4
DT
6
1_555
hydrog
WATSON-CRICK
A
DC
7
A
N3
DC
7
1_555
B
DG
16
B
N1
DG
5
1_555
hydrog
WATSON-CRICK
A
DC
7
A
N4
DC
7
1_555
B
DG
16
B
O6
DG
5
1_555
hydrog
WATSON-CRICK
A
DC
7
A
O2
DC
7
1_555
B
DG
16
B
N2
DG
5
1_555
hydrog
WATSON-CRICK
A
DT
8
A
N3
DT
8
1_555
B
DA
15
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
A
DT
8
A
O4
DT
8
1_555
B
DA
15
B
N6
DA
4
1_555
hydrog
WATSON-CRICK
A
DT
9
A
N3
DT
9
1_555
B
DA
14
B
N1
DA
3
1_555
hydrog
WATSON-CRICK
A
DT
9
A
O4
DT
9
1_555
B
DA
14
B
N6
DA
3
1_555
hydrog
WATSON-CRICK
A
DC
10
A
N3
DC
10
1_555
B
DG
13
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
10
A
N4
DC
10
1_555
B
DG
13
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
10
A
O2
DC
10
1_555
B
DG
13
B
N2
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N3
DC
11
1_555
B
DG
12
B
N1
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N4
DC
11
1_555
B
DG
12
B
O6
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
11
A
O2
DC
11
1_555
B
DG
12
B
N2
DG
1
1_555
DNA
DNA DUPLEX, BENZO[G]CHRYSENE ADDUCT, CARCINOGEN ADDUCT, DNA
1CR3
PDB
1
1CR3
1CR3
PDB
2
1CR3
1
11
1CR3
1
11
1CR3
A
1
1
11
12
22
1CR3
12
22
1CR3
B
2
1
11
BINDING SITE FOR RESIDUE BC A 23
A
BC
23
Software
4
A
DC
5
A
DC
5
4
1_555
A
DA
6
A
DA
6
4
1_555
B
DT
17
B
DT
6
4
1_555
B
DG
18
B
DG
7
4
1_555
1
P 1