0.025336 0.000000 0.000000 0.000000 0.012928 0.000000 0.000000 0.000000 0.007459 0.00000 0.00000 0.00000 Kanyo, Z.F. Pan, K.M. Williamson, R.A. Burton, D.R. Prusiner, S.B. Fletterick, R.J. Cohen, F.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 90.00 90.00 39.470 77.350 134.070 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 293 855 863 10.1006/jmbi.1999.3193 10543972 Antibody binding defines a structure for an epitope that participates in the PrPC-->PrPSc conformational change. 1999 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 298.0 1 IMAGE PLATE 1997-05-28 RIGAKU RAXIS IIC SINGLE WAVELENGTH M x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU RU200 24080.775 FAB LIGHT CHAIN FAB ANTIBODY 3F4, LIGHT CHAIN 1 nat polymer 23342.943 FAB HEAVY CHAIN FAB ANTIBODY 3F4, HEAVY CHAIN 1 nat polymer 1131.390 RECOGNITION PEPTIDE 1 syn polymer 18.015 water 9 nat water ANTI-PRION FAB 3F4 ANTI-PRION FAB 3F4 no no DVVMTQTPLSLSVTIGQPASISCKSSQSLLDSDGKTYLIWVFQRPGQSPKRLIFLVSKRDSGVPDRFTGSGSGTDFTLKI SRVEAEDVGVYYCWQGTHFPHTVGGGTKLEIARADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC DVVMTQTPLSLSVTIGQPASISCKSSQSLLDSDGKTYLIWVFQRPGQSPKRLIFLVSKRDSGVPDRFTGSGSGTDFTLKI SRVEAEDVGVYYCWQGTHFPHTVGGGTKLEIARADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC L polypeptide(L) no no KVKLQQSGAELVRSGASVKLSCTASGFNIKDYYIQWVKQRPEQGLEWIGWIDPENGNSEYAPRFQGKATMTADTLSNTAY LQLSSLTSEDTAVYYCNADLHDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSL SSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRVTS KVKLQQSGAELVRSGASVKLSCTASGFNIKDYYIQWVKQRPEQGLEWIGWIDPENGNSEYAPRFQGKATMTADTLSNTAY LQLSSLTSEDTAVYYCNADLHDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSL SSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRVTS H polypeptide(L) no no APKTNMKHMA APKTNMKHMA P polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus sample 10090 Mus musculus house mouse Mus sample 10090 Mus musculus 1 2.11 41.61 VAPOR DIFFUSION, HANGING DROP 7.0 PEG 8000, pH 7.0, VAPOR DIFFUSION, HANGING DROP at 298K, temperature 298.0K 298.0 diffrn_source repository Initial release Version format compliance Version format compliance Data collection 1 0 2000-04-17 1 1 2008-04-27 1 2 2011-07-13 1 3 2018-04-04 _diffrn_source.type RCSB Y RCSB 1999-08-20 REL HOH water sequence cooresponding to aa104-113 of Syrian hamster prion protein sample WAT 3 4 HOH HOH 215 L WAT 4 4 HOH HOH 216 L WAT 6 4 HOH HOH 217 L WAT 1 4 HOH HOH 214 H WAT 5 4 HOH HOH 215 H WAT 7 4 HOH HOH 216 H WAT 8 4 HOH HOH 217 H WAT 9 4 HOH HOH 218 H WAT 2 4 HOH HOH 2 P ASP 1 n 1 ASP 1 L VAL 2 n 2 VAL 2 L VAL 3 n 3 VAL 3 L MET 4 n 4 MET 4 L THR 5 n 5 THR 5 L GLN 6 n 6 GLN 6 L THR 7 n 7 THR 7 L PRO 8 n 8 PRO 8 L LEU 9 n 9 LEU 9 L SER 10 n 10 SER 10 L LEU 11 n 11 LEU 11 L SER 12 n 12 SER 12 L VAL 13 n 13 VAL 13 L THR 14 n 14 THR 14 L ILE 15 n 15 ILE 15 L GLY 16 n 16 GLY 16 L GLN 17 n 17 GLN 17 L PRO 18 n 18 PRO 18 L ALA 19 n 19 ALA 19 L SER 20 n 20 SER 20 L ILE 21 n 21 ILE 21 L SER 22 n 22 SER 22 L CYS 23 n 23 CYS 23 L LYS 24 n 24 LYS 24 L SER 25 n 25 SER 25 L SER 26 n 26 SER 26 L GLN 27 n 27 GLN 27 L SER 27 n 28 A SER 27 L LEU 27 n 29 B LEU 27 L LEU 27 n 30 C LEU 27 L ASP 27 n 31 D ASP 27 L SER 27 n 32 E SER 27 L ASP 28 n 33 ASP 28 L GLY 29 n 34 GLY 29 L LYS 30 n 35 LYS 30 L THR 31 n 36 THR 31 L TYR 32 n 37 TYR 32 L LEU 33 n 38 LEU 33 L ILE 34 n 39 ILE 34 L TRP 35 n 40 TRP 35 L VAL 36 n 41 VAL 36 L PHE 37 n 42 PHE 37 L GLN 38 n 43 GLN 38 L ARG 39 n 44 ARG 39 L PRO 40 n 45 PRO 40 L GLY 41 n 46 GLY 41 L GLN 42 n 47 GLN 42 L SER 43 n 48 SER 43 L PRO 44 n 49 PRO 44 L LYS 45 n 50 LYS 45 L ARG 46 n 51 ARG 46 L LEU 47 n 52 LEU 47 L ILE 48 n 53 ILE 48 L PHE 49 n 54 PHE 49 L LEU 50 n 55 LEU 50 L VAL 51 n 56 VAL 51 L SER 52 n 57 SER 52 L LYS 53 n 58 LYS 53 L ARG 54 n 59 ARG 54 L ASP 55 n 60 ASP 55 L SER 56 n 61 SER 56 L GLY 57 n 62 GLY 57 L VAL 58 n 63 VAL 58 L PRO 59 n 64 PRO 59 L ASP 60 n 65 ASP 60 L ARG 61 n 66 ARG 61 L PHE 62 n 67 PHE 62 L THR 63 n 68 THR 63 L GLY 64 n 69 GLY 64 L SER 65 n 70 SER 65 L GLY 66 n 71 GLY 66 L SER 67 n 72 SER 67 L GLY 68 n 73 GLY 68 L THR 69 n 74 THR 69 L ASP 70 n 75 ASP 70 L PHE 71 n 76 PHE 71 L THR 72 n 77 THR 72 L LEU 73 n 78 LEU 73 L LYS 74 n 79 LYS 74 L ILE 75 n 80 ILE 75 L SER 76 n 81 SER 76 L ARG 77 n 82 ARG 77 L VAL 78 n 83 VAL 78 L GLU 79 n 84 GLU 79 L ALA 80 n 85 ALA 80 L GLU 81 n 86 GLU 81 L ASP 82 n 87 ASP 82 L VAL 83 n 88 VAL 83 L GLY 84 n 89 GLY 84 L VAL 85 n 90 VAL 85 L TYR 86 n 91 TYR 86 L TYR 87 n 92 TYR 87 L CYS 88 n 93 CYS 88 L TRP 89 n 94 TRP 89 L GLN 90 n 95 GLN 90 L GLY 91 n 96 GLY 91 L THR 92 n 97 THR 92 L HIS 93 n 98 HIS 93 L PHE 94 n 99 PHE 94 L PRO 95 n 100 PRO 95 L HIS 95 n 101 A HIS 95 L THR 96 n 102 THR 96 L VAL 97 n 103 VAL 97 L GLY 99 n 104 GLY 99 L GLY 100 n 105 GLY 100 L GLY 101 n 106 GLY 101 L THR 102 n 107 THR 102 L LYS 103 n 108 LYS 103 L LEU 104 n 109 LEU 104 L GLU 105 n 110 GLU 105 L ILE 106 n 111 ILE 106 L ALA 106 n 112 A ALA 106 L ARG 108 n 113 ARG 108 L ALA 109 n 114 ALA 109 L ASP 110 n 115 ASP 110 L ALA 111 n 116 ALA 111 L ALA 112 n 117 ALA 112 L PRO 113 n 118 PRO 113 L THR 114 n 119 THR 114 L VAL 115 n 120 VAL 115 L SER 116 n 121 SER 116 L ILE 117 n 122 ILE 117 L PHE 118 n 123 PHE 118 L PRO 119 n 124 PRO 119 L PRO 120 n 125 PRO 120 L SER 121 n 126 SER 121 L SER 122 n 127 SER 122 L GLU 123 n 128 GLU 123 L GLN 124 n 129 GLN 124 L LEU 125 n 130 LEU 125 L THR 126 n 131 THR 126 L SER 127 n 132 SER 127 L GLY 128 n 133 GLY 128 L GLY 129 n 134 GLY 129 L ALA 130 n 135 ALA 130 L SER 131 n 136 SER 131 L VAL 132 n 137 VAL 132 L VAL 133 n 138 VAL 133 L CYS 134 n 139 CYS 134 L PHE 135 n 140 PHE 135 L LEU 136 n 141 LEU 136 L ASN 137 n 142 ASN 137 L ASN 138 n 143 ASN 138 L PHE 139 n 144 PHE 139 L TYR 140 n 145 TYR 140 L PRO 141 n 146 PRO 141 L LYS 142 n 147 LYS 142 L ASP 143 n 148 ASP 143 L ILE 144 n 149 ILE 144 L ASN 145 n 150 ASN 145 L VAL 146 n 151 VAL 146 L LYS 147 n 152 LYS 147 L TRP 148 n 153 TRP 148 L LYS 149 n 154 LYS 149 L ILE 150 n 155 ILE 150 L ASP 151 n 156 ASP 151 L GLY 152 n 157 GLY 152 L SER 153 n 158 SER 153 L GLU 154 n 159 GLU 154 L ARG 155 n 160 ARG 155 L GLN 156 n 161 GLN 156 L ASN 157 n 162 ASN 157 L GLY 158 n 163 GLY 158 L VAL 159 n 164 VAL 159 L LEU 160 n 165 LEU 160 L ASN 161 n 166 ASN 161 L SER 162 n 167 SER 162 L TRP 163 n 168 TRP 163 L THR 164 n 169 THR 164 L ASP 165 n 170 ASP 165 L GLN 166 n 171 GLN 166 L ASP 167 n 172 ASP 167 L SER 168 n 173 SER 168 L LYS 169 n 174 LYS 169 L ASP 170 n 175 ASP 170 L SER 171 n 176 SER 171 L THR 172 n 177 THR 172 L TYR 173 n 178 TYR 173 L SER 174 n 179 SER 174 L MET 175 n 180 MET 175 L SER 176 n 181 SER 176 L SER 177 n 182 SER 177 L THR 178 n 183 THR 178 L LEU 179 n 184 LEU 179 L THR 180 n 185 THR 180 L LEU 181 n 186 LEU 181 L THR 182 n 187 THR 182 L LYS 183 n 188 LYS 183 L ASP 184 n 189 ASP 184 L GLU 185 n 190 GLU 185 L TYR 186 n 191 TYR 186 L GLU 187 n 192 GLU 187 L ARG 188 n 193 ARG 188 L HIS 189 n 194 HIS 189 L ASN 190 n 195 ASN 190 L SER 191 n 196 SER 191 L TYR 192 n 197 TYR 192 L THR 193 n 198 THR 193 L CYS 194 n 199 CYS 194 L GLU 195 n 200 GLU 195 L ALA 196 n 201 ALA 196 L THR 197 n 202 THR 197 L HIS 198 n 203 HIS 198 L LYS 199 n 204 LYS 199 L THR 200 n 205 THR 200 L SER 201 n 206 SER 201 L THR 202 n 207 THR 202 L SER 203 n 208 SER 203 L PRO 204 n 209 PRO 204 L ILE 205 n 210 ILE 205 L VAL 206 n 211 VAL 206 L LYS 207 n 212 LYS 207 L SER 208 n 213 SER 208 L PHE 209 n 214 PHE 209 L ASN 210 n 215 ASN 210 L ARG 211 n 216 ARG 211 L ASN 212 n 217 ASN 212 L GLU 213 n 218 GLU 213 L CYS 214 n 219 CYS 214 L n 1 1 H n 2 2 H LYS 3 n 3 LYS 3 H LEU 4 n 4 LEU 4 H GLN 5 n 5 GLN 5 H GLN 6 n 6 GLN 6 H SER 7 n 7 SER 7 H GLY 8 n 8 GLY 8 H ALA 9 n 9 ALA 9 H GLU 10 n 10 GLU 10 H LEU 11 n 11 LEU 11 H VAL 12 n 12 VAL 12 H ARG 13 n 13 ARG 13 H SER 14 n 14 SER 14 H GLY 15 n 15 GLY 15 H ALA 16 n 16 ALA 16 H SER 17 n 17 SER 17 H VAL 18 n 18 VAL 18 H LYS 19 n 19 LYS 19 H LEU 20 n 20 LEU 20 H SER 21 n 21 SER 21 H CYS 22 n 22 CYS 22 H THR 23 n 23 THR 23 H ALA 24 n 24 ALA 24 H SER 25 n 25 SER 25 H GLY 26 n 26 GLY 26 H PHE 27 n 27 PHE 27 H ASN 28 n 28 ASN 28 H ILE 29 n 29 ILE 29 H LYS 30 n 30 LYS 30 H ASP 31 n 31 ASP 31 H TYR 32 n 32 TYR 32 H TYR 33 n 33 TYR 33 H ILE 34 n 34 ILE 34 H GLN 35 n 35 GLN 35 H TRP 36 n 36 TRP 36 H VAL 37 n 37 VAL 37 H LYS 38 n 38 LYS 38 H GLN 39 n 39 GLN 39 H ARG 40 n 40 ARG 40 H PRO 41 n 41 PRO 41 H GLU 42 n 42 GLU 42 H GLN 43 n 43 GLN 43 H GLY 44 n 44 GLY 44 H LEU 45 n 45 LEU 45 H GLU 46 n 46 GLU 46 H TRP 47 n 47 TRP 47 H ILE 48 n 48 ILE 48 H GLY 49 n 49 GLY 49 H TRP 50 n 50 TRP 50 H ILE 51 n 51 ILE 51 H ASP 52 n 52 ASP 52 H PRO 52 n 53 A PRO 52 H GLU 53 n 54 GLU 53 H ASN 54 n 55 ASN 54 H GLY 55 n 56 GLY 55 H ASN 56 n 57 ASN 56 H SER 57 n 58 SER 57 H GLU 58 n 59 GLU 58 H TYR 59 n 60 TYR 59 H ALA 60 n 61 ALA 60 H PRO 61 n 62 PRO 61 H ARG 62 n 63 ARG 62 H PHE 63 n 64 PHE 63 H GLN 64 n 65 GLN 64 H GLY 65 n 66 GLY 65 H LYS 66 n 67 LYS 66 H ALA 67 n 68 ALA 67 H THR 68 n 69 THR 68 H MET 69 n 70 MET 69 H THR 70 n 71 THR 70 H ALA 71 n 72 ALA 71 H ASP 72 n 73 ASP 72 H THR 73 n 74 THR 73 H LEU 74 n 75 LEU 74 H SER 75 n 76 SER 75 H ASN 76 n 77 ASN 76 H THR 77 n 78 THR 77 H ALA 78 n 79 ALA 78 H TYR 79 n 80 TYR 79 H LEU 80 n 81 LEU 80 H GLN 81 n 82 GLN 81 H LEU 82 n 83 LEU 82 H SER 82 n 84 A SER 82 H SER 82 n 85 B SER 82 H LEU 82 n 86 C LEU 82 H THR 83 n 87 THR 83 H SER 84 n 88 SER 84 H GLU 85 n 89 GLU 85 H ASP 86 n 90 ASP 86 H THR 87 n 91 THR 87 H ALA 88 n 92 ALA 88 H VAL 89 n 93 VAL 89 H TYR 90 n 94 TYR 90 H TYR 91 n 95 TYR 91 H CYS 92 n 96 CYS 92 H ASN 93 n 97 ASN 93 H ALA 94 n 98 ALA 94 H ASP 95 n 99 ASP 95 H LEU 96 n 100 LEU 96 H HIS 97 n 101 HIS 97 H ASP 98 n 102 ASP 98 H TYR 99 n 103 TYR 99 H TRP 100 n 104 TRP 100 H GLY 101 n 105 GLY 101 H GLN 102 n 106 GLN 102 H GLY 103 n 107 GLY 103 H THR 104 n 108 THR 104 H THR 105 n 109 THR 105 H LEU 106 n 110 LEU 106 H THR 107 n 111 THR 107 H VAL 108 n 112 VAL 108 H SER 109 n 113 SER 109 H SER 110 n 114 SER 110 H ALA 111 n 115 ALA 111 H LYS 112 n 116 LYS 112 H THR 113 n 117 THR 113 H THR 114 n 118 THR 114 H ALA 115 n 119 ALA 115 H PRO 116 n 120 PRO 116 H SER 117 n 121 SER 117 H VAL 118 n 122 VAL 118 H TYR 119 n 123 TYR 119 H PRO 120 n 124 PRO 120 H LEU 121 n 125 LEU 121 H ALA 122 n 126 ALA 122 H PRO 123 n 127 PRO 123 H VAL 124 n 128 VAL 124 H CYS 125 n 129 CYS 125 H GLY 126 n 130 GLY 126 H ASP 127 n 131 ASP 127 H THR 128 n 132 THR 128 H THR 129 n 133 THR 129 H GLY 130 n 134 GLY 130 H SER 131 n 135 SER 131 H SER 132 n 136 SER 132 H VAL 133 n 137 VAL 133 H THR 134 n 138 THR 134 H LEU 135 n 139 LEU 135 H GLY 136 n 140 GLY 136 H CYS 137 n 141 CYS 137 H LEU 138 n 142 LEU 138 H VAL 139 n 143 VAL 139 H LYS 140 n 144 LYS 140 H GLY 141 n 145 GLY 141 H TYR 142 n 146 TYR 142 H PHE 143 n 147 PHE 143 H PRO 144 n 148 PRO 144 H GLU 145 n 149 GLU 145 H PRO 146 n 150 PRO 146 H VAL 147 n 151 VAL 147 H THR 148 n 152 THR 148 H LEU 149 n 153 LEU 149 H THR 150 n 154 THR 150 H TRP 151 n 155 TRP 151 H ASN 152 n 156 ASN 152 H SER 153 n 157 SER 153 H GLY 154 n 158 GLY 154 H SER 155 n 159 SER 155 H LEU 156 n 160 LEU 156 H SER 157 n 161 SER 157 H SER 158 n 162 SER 158 H GLY 159 n 163 GLY 159 H VAL 160 n 164 VAL 160 H HIS 161 n 165 HIS 161 H THR 162 n 166 THR 162 H PHE 163 n 167 PHE 163 H PRO 164 n 168 PRO 164 H ALA 165 n 169 ALA 165 H VAL 166 n 170 VAL 166 H LEU 167 n 171 LEU 167 H GLN 168 n 172 GLN 168 H SER 169 n 173 SER 169 H ASP 170 n 174 ASP 170 H LEU 171 n 175 LEU 171 H TYR 172 n 176 TYR 172 H THR 173 n 177 THR 173 H LEU 174 n 178 LEU 174 H SER 175 n 179 SER 175 H SER 176 n 180 SER 176 H SER 177 n 181 SER 177 H VAL 178 n 182 VAL 178 H THR 179 n 183 THR 179 H VAL 180 n 184 VAL 180 H THR 181 n 185 THR 181 H SER 182 n 186 SER 182 H SER 183 n 187 SER 183 H THR 184 n 188 THR 184 H TRP 185 n 189 TRP 185 H PRO 186 n 190 PRO 186 H SER 187 n 191 SER 187 H GLN 188 n 192 GLN 188 H SER 189 n 193 SER 189 H ILE 190 n 194 ILE 190 H THR 191 n 195 THR 191 H CYS 192 n 196 CYS 192 H ASN 193 n 197 ASN 193 H VAL 194 n 198 VAL 194 H ALA 195 n 199 ALA 195 H HIS 196 n 200 HIS 196 H PRO 197 n 201 PRO 197 H ALA 198 n 202 ALA 198 H SER 199 n 203 SER 199 H SER 200 n 204 SER 200 H THR 201 n 205 THR 201 H LYS 202 n 206 LYS 202 H VAL 203 n 207 VAL 203 H ASP 204 n 208 ASP 204 H LYS 205 n 209 LYS 205 H LYS 206 n 210 LYS 206 H ILE 207 n 211 ILE 207 H GLU 208 n 212 GLU 208 H PRO 209 n 213 PRO 209 H ARG 210 n 214 ARG 210 H VAL 211 n 215 VAL 211 H THR 212 n 216 THR 212 H SER 213 n 217 SER 213 H ALA 1 n 1 ALA 104 P PRO 2 n 2 PRO 105 P LYS 3 n 3 LYS 106 P THR 4 n 4 THR 107 P ASN 5 n 5 ASN 108 P MET 6 n 6 MET 109 P LYS 7 n 7 LYS 110 P HIS 8 n 8 HIS 111 P MET 9 n 9 MET 112 P ALA 10 n 10 ALA 113 P author_and_software_defined_assembly PISA 3 trimeric 5220 -31 19540 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 L O THR 7 A O THR 7 L N SER 22 A N SER 22 L O CYS 23 A O CYS 23 L N PHE 71 A N PHE 76 L O LYS 74 A O LYS 79 L N THR 63 A N THR 68 L N LEU 11 A N LEU 11 L O LYS 103 A O LYS 108 L N LEU 104 A N LEU 109 L O GLY 84 A O GLY 89 L N TRP 89 A N TRP 94 L O ILE 34 A O ILE 39 L N PHE 37 A N PHE 42 L O LYS 45 A O LYS 50 L N PHE 49 A N PHE 54 L O LYS 53 A O LYS 58 L N LEU 11 A N LEU 11 L O LYS 103 A O LYS 108 L N LEU 104 A N LEU 109 L O GLY 84 A O GLY 89 L N GLN 90 A N GLN 95 L O THR 96 A O THR 102 L N PHE 118 A N PHE 123 L O VAL 133 A O VAL 138 L O PHE 139 A O PHE 144 L N TYR 173 A N TYR 178 L N THR 178 A N THR 183 L O LEU 160 A O LEU 165 L N ARG 155 A N ARG 160 L O TRP 148 A O TRP 153 L O LYS 149 A O LYS 154 L N THR 193 A N THR 198 L O HIS 198 A O HIS 203 L N SER 201 A N SER 206 H O GLN 5 B O GLN 5 H N THR 23 B N THR 23 H O CYS 22 B O CYS 22 H N ALA 78 B N ALA 79 H N GLN 81 B N GLN 82 H O THR 68 B O THR 69 H O GLU 58 B O GLU 59 H N TRP 50 B N TRP 50 H O ILE 51 B O ILE 51 H N ILE 34 B N ILE 34 H O GLN 39 B O GLN 39 H N VAL 89 B N VAL 93 H N ALA 94 B N ALA 98 H O TYR 99 B O TYR 103 H O GLU 58 B O GLU 59 H N TRP 50 B N TRP 50 H O ILE 51 B O ILE 51 H N ILE 34 B N ILE 34 H O GLN 39 B O GLN 39 H N VAL 89 B N VAL 93 H N TYR 90 B N TYR 94 H O THR 104 B O THR 108 H O THR 105 B O THR 109 H N GLU 10 B N GLU 10 H N LEU 121 B N LEU 125 H O GLY 136 B O GLY 140 H O TYR 142 B O TYR 146 H N TYR 172 B N TYR 176 H N SER 177 B N SER 181 H O HIS 161 B O HIS 165 H O THR 150 B O THR 154 H N ASN 193 B N ASN 197 H N HIS 196 B N HIS 200 H O THR 201 B O THR 205 1 P N ALA 104 C N ALA 1 1 Y 1 H LYS 1 B LYS 1 1 Y 1 H VAL 2 B VAL 2 1 Y 1 L L ARG PRO 39 40 -147.44 1 L LEU 11 -160.22 118.80 1 L PRO 44 -43.34 159.04 1 L VAL 51 71.29 -56.21 1 L THR 126 -77.05 20.88 1 L ASN 138 35.69 67.49 1 L ASN 190 -98.15 -66.07 1 L LYS 199 -32.48 -37.28 1 L SER 201 -173.53 139.61 1 L ARG 211 -58.38 87.98 1 L ASN 212 179.94 -64.83 1 H SER 25 -114.04 -78.01 1 H ILE 29 -68.79 4.22 1 H PRO 41 -63.94 67.08 1 H GLU 42 -162.39 -57.63 1 H ASN 54 -148.64 21.05 1 H THR 87 -58.06 96.87 1 H GLN 102 -45.98 -13.96 1 H CYS 125 -33.04 100.12 1 H PRO 144 -101.15 -168.11 1 H PRO 146 -102.50 -164.99 1 H SER 153 55.73 10.73 1 H THR 184 -49.14 -77.79 1 H SER 199 -140.48 30.94 1 H SER 200 35.46 64.21 1 H VAL 211 -131.75 -107.47 0.268 0.159 2.9 20.0 839 8662 8040 random 1 THROUGHOUT 2.0 Engh & Huber 2.9 20.0 9 3403 0 0 3394 0.008 1.681 36.2 2.9 20.0 1CU4 8689 8689 2.0 0.077 1 9.5 3.3 92.1 0.216 2.9 3.03 2.9 90.4 data reduction MOSFLM data scaling SCALA phasing AMoRE refinement X-PLOR 3.1 data scaling CCP4 (SCALA) FAB LIGHT AND HEAVY CHAINS/RECOGNITION PEPTIDE COMPLEX CRYSTAL STRUCTURE OF THE ANTI-PRION FAB 3F4 IN COMPLEX WITH ITS PEPTIDE EPITOPE 1 N N 2 N N 3 N N 4 N N 4 N N 4 N N L GLU 79 A GLU 84 HELX_P L VAL 83 A VAL 88 5 1 5 L SER 121 A SER 126 HELX_P L THR 126 A THR 131 1 2 6 L LYS 183 A LYS 188 HELX_P L HIS 189 A HIS 194 1 3 7 H PRO 52 B PRO 53 HELX_P H GLY 55 B GLY 56 5 4 4 A H PRO 61 B PRO 62 HELX_P H GLN 64 B GLN 65 5 5 4 H ASP 95 B ASP 99 HELX_P H ASP 98 B ASP 102 5 6 4 H SER 153 B SER 157 HELX_P H SER 155 B SER 159 5 7 3 H SER 183 B SER 187 HELX_P H GLN 188 B GLN 192 1 8 6 H PRO 197 B PRO 201 HELX_P H SER 200 B SER 204 5 9 4 disulf 2.030 L CYS 23 A SG CYS 23 1_555 L CYS 88 A SG CYS 93 1_555 disulf 2.030 L CYS 134 A SG CYS 139 1_555 L CYS 194 A SG CYS 199 1_555 disulf 2.366 H CYS 22 B SG CYS 22 1_555 H CYS 92 B SG CYS 96 1_555 disulf 2.467 H CYS 137 B SG CYS 141 1_555 H CYS 192 B SG CYS 196 1_555 IMMUNE SYSTEM IMMUNOGLOBULIN FOLD, IMMUNE SYSTEM L THR 7 A THR 7 1 L PRO 8 A PRO 8 -7.27 L PHE 94 A PHE 99 1 L PRO 95 A PRO 100 -2.90 L TYR 140 A TYR 145 1 L PRO 141 A PRO 146 -2.35 H PHE 143 B PHE 147 1 H PRO 144 B PRO 148 -9.92 H GLU 145 B GLU 149 1 H PRO 146 B PRO 150 -6.61 H TRP 185 B TRP 189 1 H PRO 186 B PRO 190 0.30 P ALA 104 C ALA 1 1 P PRO 105 C PRO 2 -28.91 1CU4 PDB 1 1CU4 1CU4 PDB 2 1CU4 1CU4 PDB 3 1CU4 1 214 1CU4 1 214 1CU4 L 1 1 219 1 213 1CU4 1 213 1CU4 H 2 1 217 104 113 1CU4 104 113 1CU4 P 3 1 10 4 6 4 4 4 4 5 6 4 3 anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel L MET 4 A MET 4 L THR 7 A THR 7 L ALA 19 A ALA 19 L SER 25 A SER 25 L ASP 70 A ASP 75 L ILE 75 A ILE 80 L PHE 62 A PHE 67 L SER 67 A SER 72 L SER 10 A SER 10 L THR 14 A THR 14 L THR 102 A THR 107 L ALA 106 A ALA 112 A L GLY 84 A GLY 89 L GLN 90 A GLN 95 L LEU 33 A LEU 38 L GLN 38 A GLN 43 L LYS 45 A LYS 50 L PHE 49 A PHE 54 L LYS 53 A LYS 58 L ARG 54 A ARG 59 L SER 10 A SER 10 L THR 14 A THR 14 L THR 102 A THR 107 L ALA 106 A ALA 112 A L GLY 84 A GLY 89 L GLN 90 A GLN 95 L THR 96 A THR 102 L VAL 97 A VAL 103 L THR 114 A THR 119 L PHE 118 A PHE 123 L GLY 129 A GLY 134 L PHE 139 A PHE 144 L TYR 173 A TYR 178 L THR 182 A THR 187 L VAL 159 A VAL 164 L TRP 163 A TRP 168 L SER 153 A SER 158 L ARG 155 A ARG 160 L ASN 145 A ASN 150 L ILE 150 A ILE 155 L SER 191 A SER 196 L HIS 198 A HIS 203 L SER 201 A SER 206 L ASN 210 A ASN 215 H LEU 4 B LEU 4 H GLN 6 B GLN 6 H VAL 18 B VAL 18 H ALA 24 B ALA 24 H THR 77 B THR 78 H LEU 82 B LEU 83 H ALA 67 B ALA 68 H ASP 72 B ASP 73 H ASN 56 B ASN 57 H TYR 59 B TYR 60 H LEU 45 B LEU 45 H ASP 52 B ASP 52 H ILE 34 B ILE 34 H GLN 39 B GLN 39 H ALA 88 B ALA 92 H ALA 94 B ALA 98 H TYR 99 B TYR 103 H TRP 100 B TRP 104 H ASN 56 B ASN 57 H TYR 59 B TYR 60 H LEU 45 B LEU 45 H ASP 52 B ASP 52 H ILE 34 B ILE 34 H GLN 39 B GLN 39 H ALA 88 B ALA 92 H ALA 94 B ALA 98 H THR 104 B THR 108 H VAL 108 B VAL 112 H GLU 10 B GLU 10 H VAL 12 B VAL 12 H SER 117 B SER 121 H LEU 121 B LEU 125 H SER 132 B SER 136 H TYR 142 B TYR 146 H LEU 171 B LEU 175 H THR 181 B THR 185 H VAL 160 B VAL 164 H GLN 168 B GLN 172 H THR 148 B THR 152 H TRP 151 B TRP 155 H ILE 190 B ILE 194 H HIS 196 B HIS 200 H THR 201 B THR 205 H ILE 207 B ILE 211 19 orthorhombic P 21 21 21