0.03034 0.00000 0.00609 0.00000 0.02970 0.00000 0.00000 0.00000 0.02155 0.00000 0.00000 0.00000 Inoue, T. Nishio, N. Kai, Y. Suzuki, S. Kataoka, K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 2 90.00 101.35 90.00 32.960 33.670 47.340 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cu 2 63.546 COPPER (II) ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 333 117 124 10.1016/j.jmb.2003.08.002 14516747 The significance of the flexible loop in the azurin (Az-iso2) from the obligate methylotroph Methylomonas sp. strain J. 2003 UK Biochem.J. BIJOAK 0043 0264-6021 261 495 499 Two distinct azurins function in the electron-transport chain of the obligate methylotroph Methylomonas J 1989 DK Acta Crystallogr.,Sect.D ABCRE6 0766 0907-4449 55 307 309 10.1107/S0907444998014036 Crystallization and preliminary X-ray study of iso-2 azurin from the methylotrophic bacterium, Methylomonas J 1999 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 298.0 1 IMAGE PLATE 1997-12-20 RIGAKU RAXIS IIC SINGLE WAVELENGTH M x-ray 1 1.54 1.0 1.54 ROTATING ANODE RIGAKU RU300 13822.544 PROTEIN (AZURIN ISO-2) 1 nat polymer 63.546 COPPER (II) ION 1 syn non-polymer 18.015 water 82 nat water no no ASCETTVTSGDTMTYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRV IAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE ASCETTVTSGDTMTYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRV IAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Methylomonas sample 32038 Methylomonas sp. J 1 1.86 33.98 VAPOR DIFFUSION, HANGING DROP 5.0 PEG4000, SODIUM CACODYLATE, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K 298 repository Initial release Version format compliance Version format compliance 1 0 2000-08-23 1 1 2008-04-27 1 2 2011-07-13 RCSB Y RCSB 1999-08-21 REL REL CU COPPER (II) ION HOH water CU 130 2 CU CU 130 A HOH 131 3 HOH HOH 131 A HOH 132 3 HOH HOH 132 A HOH 133 3 HOH HOH 133 A HOH 134 3 HOH HOH 134 A HOH 135 3 HOH HOH 135 A HOH 136 3 HOH HOH 136 A HOH 137 3 HOH HOH 137 A HOH 138 3 HOH HOH 138 A HOH 139 3 HOH HOH 139 A HOH 140 3 HOH HOH 140 A HOH 141 3 HOH HOH 141 A HOH 142 3 HOH HOH 142 A HOH 143 3 HOH HOH 143 A HOH 144 3 HOH HOH 144 A HOH 145 3 HOH HOH 145 A HOH 146 3 HOH HOH 146 A HOH 147 3 HOH HOH 147 A HOH 148 3 HOH HOH 148 A HOH 149 3 HOH HOH 149 A HOH 150 3 HOH HOH 150 A HOH 151 3 HOH HOH 151 A HOH 152 3 HOH HOH 152 A HOH 153 3 HOH HOH 153 A HOH 154 3 HOH HOH 154 A HOH 155 3 HOH HOH 155 A HOH 156 3 HOH HOH 156 A HOH 157 3 HOH HOH 157 A HOH 158 3 HOH HOH 158 A HOH 159 3 HOH HOH 159 A HOH 160 3 HOH HOH 160 A HOH 161 3 HOH HOH 161 A HOH 162 3 HOH HOH 162 A HOH 163 3 HOH HOH 163 A HOH 164 3 HOH HOH 164 A HOH 165 3 HOH HOH 165 A HOH 166 3 HOH HOH 166 A HOH 167 3 HOH HOH 167 A HOH 168 3 HOH HOH 168 A HOH 169 3 HOH HOH 169 A HOH 170 3 HOH HOH 170 A HOH 171 3 HOH HOH 171 A HOH 172 3 HOH HOH 172 A HOH 173 3 HOH HOH 173 A HOH 174 3 HOH HOH 174 A HOH 175 3 HOH HOH 175 A HOH 176 3 HOH HOH 176 A HOH 177 3 HOH HOH 177 A HOH 178 3 HOH HOH 178 A HOH 179 3 HOH HOH 179 A HOH 180 3 HOH HOH 180 A HOH 181 3 HOH HOH 181 A HOH 182 3 HOH HOH 182 A HOH 183 3 HOH HOH 183 A HOH 184 3 HOH HOH 184 A HOH 185 3 HOH HOH 185 A HOH 186 3 HOH HOH 186 A HOH 187 3 HOH HOH 187 A HOH 188 3 HOH HOH 188 A HOH 189 3 HOH HOH 189 A HOH 190 3 HOH HOH 190 A HOH 191 3 HOH HOH 191 A HOH 192 3 HOH HOH 192 A HOH 193 3 HOH HOH 193 A HOH 194 3 HOH HOH 194 A HOH 195 3 HOH HOH 195 A HOH 196 3 HOH HOH 196 A HOH 197 3 HOH HOH 197 A HOH 198 3 HOH HOH 198 A HOH 199 3 HOH HOH 199 A HOH 200 3 HOH HOH 200 A HOH 201 3 HOH HOH 201 A HOH 202 3 HOH HOH 202 A HOH 203 3 HOH HOH 203 A HOH 204 3 HOH HOH 204 A HOH 205 3 HOH HOH 205 A HOH 206 3 HOH HOH 206 A HOH 207 3 HOH HOH 207 A HOH 208 3 HOH HOH 208 A HOH 209 3 HOH HOH 209 A HOH 210 3 HOH HOH 210 A HOH 211 3 HOH HOH 211 A HOH 212 3 HOH HOH 212 A ALA 1 n 1 ALA 1 A SER 2 n 2 SER 2 A CYS 3 n 3 CYS 3 A GLU 4 n 4 GLU 4 A THR 5 n 5 THR 5 A THR 6 n 6 THR 6 A VAL 7 n 7 VAL 7 A THR 8 n 8 THR 8 A SER 9 n 9 SER 9 A GLY 10 n 10 GLY 10 A ASP 11 n 11 ASP 11 A THR 12 n 12 THR 12 A MET 13 n 13 MET 13 A THR 14 n 14 THR 14 A TYR 15 n 15 TYR 15 A SER 16 n 16 SER 16 A THR 17 n 17 THR 17 A ARG 18 n 18 ARG 18 A SER 19 n 19 SER 19 A ILE 20 n 20 ILE 20 A SER 21 n 21 SER 21 A VAL 22 n 22 VAL 22 A PRO 23 n 23 PRO 23 A ALA 24 n 24 ALA 24 A SER 25 n 25 SER 25 A CYS 26 n 26 CYS 26 A ALA 27 n 27 ALA 27 A GLU 28 n 28 GLU 28 A PHE 29 n 29 PHE 29 A THR 30 n 30 THR 30 A VAL 31 n 31 VAL 31 A ASN 32 n 32 ASN 32 A PHE 33 n 33 PHE 33 A GLU 34 n 34 GLU 34 A HIS 35 n 35 HIS 35 A LYS 36 n 36 LYS 36 A GLY 37 n 37 GLY 37 A HIS 38 n 38 HIS 38 A MET 39 n 39 MET 39 A PRO 40 n 40 PRO 40 A LYS 41 n 41 LYS 41 A THR 42 n 42 THR 42 A GLY 43 n 43 GLY 43 A MET 44 n 44 MET 44 A GLY 45 n 45 GLY 45 A HIS 46 n 46 HIS 46 A ASN 47 n 47 ASN 47 A TRP 48 n 48 TRP 48 A VAL 49 n 49 VAL 49 A LEU 50 n 50 LEU 50 A ALA 51 n 51 ALA 51 A LYS 52 n 52 LYS 52 A SER 53 n 53 SER 53 A ALA 54 n 54 ALA 54 A ASP 55 n 55 ASP 55 A VAL 56 n 56 VAL 56 A GLY 57 n 57 GLY 57 A ASP 58 n 58 ASP 58 A VAL 59 n 59 VAL 59 A ALA 60 n 60 ALA 60 A LYS 61 n 61 LYS 61 A GLU 62 n 62 GLU 62 A GLY 63 n 63 GLY 63 A ALA 64 n 64 ALA 64 A HIS 65 n 65 HIS 65 A ALA 66 n 66 ALA 66 A GLY 67 n 67 GLY 67 A ALA 68 n 68 ALA 68 A ASP 69 n 69 ASP 69 A ASN 70 n 70 ASN 70 A ASN 71 n 71 ASN 71 A PHE 72 n 72 PHE 72 A VAL 73 n 73 VAL 73 A THR 74 n 74 THR 74 A PRO 75 n 75 PRO 75 A GLY 76 n 76 GLY 76 A ASP 77 n 77 ASP 77 A LYS 78 n 78 LYS 78 A ARG 79 n 79 ARG 79 A VAL 80 n 80 VAL 80 A ILE 81 n 81 ILE 81 A ALA 82 n 82 ALA 82 A PHE 83 n 83 PHE 83 A THR 84 n 84 THR 84 A PRO 85 n 85 PRO 85 A ILE 86 n 86 ILE 86 A ILE 87 n 87 ILE 87 A GLY 88 n 88 GLY 88 A GLY 89 n 89 GLY 89 A GLY 90 n 90 GLY 90 A GLU 91 n 91 GLU 91 A LYS 92 n 92 LYS 92 A THR 93 n 93 THR 93 A SER 94 n 94 SER 94 A VAL 95 n 95 VAL 95 A LYS 96 n 96 LYS 96 A PHE 97 n 97 PHE 97 A LYS 98 n 98 LYS 98 A VAL 99 n 99 VAL 99 A SER 100 n 100 SER 100 A ALA 101 n 101 ALA 101 A LEU 102 n 102 LEU 102 A SER 103 n 103 SER 103 A LYS 104 n 104 LYS 104 A ASP 105 n 105 ASP 105 A GLU 106 n 106 GLU 106 A ALA 107 n 107 ALA 107 A TYR 108 n 108 TYR 108 A THR 109 n 109 THR 109 A TYR 110 n 110 TYR 110 A PHE 111 n 111 PHE 111 A CYS 112 n 112 CYS 112 A SER 113 n 113 SER 113 A TYR 114 n 114 TYR 114 A PRO 115 n 115 PRO 115 A GLY 116 n 116 GLY 116 A HIS 117 n 117 HIS 117 A PHE 118 n 118 PHE 118 A SER 119 n 119 SER 119 A MET 120 n 120 MET 120 A MET 121 n 121 MET 121 A ARG 122 n 122 ARG 122 A GLY 123 n 123 GLY 123 A THR 124 n 124 THR 124 A LEU 125 n 125 LEU 125 A LYS 126 n 126 LYS 126 A LEU 127 n 127 LEU 127 A GLU 128 n 128 GLU 128 A GLU 129 n 129 GLU 129 A author_defined_assembly 1 monomeric A HIS 117 A ND1 HIS 117 1_555 A CU 130 B CU CU 1_555 A HIS 46 A ND1 HIS 46 1_555 102.9 A HIS 117 A ND1 HIS 117 1_555 A CU 130 B CU CU 1_555 A CYS 112 A SG CYS 112 1_555 115.7 A HIS 46 A ND1 HIS 46 1_555 A CU 130 B CU CU 1_555 A CYS 112 A SG CYS 112 1_555 137.4 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A N THR 5 A N THR 5 A O THR 30 A O THR 30 A N PHE 33 A N PHE 33 A O THR 93 A O THR 93 A N ILE 20 A N ILE 20 A O THR 124 A O THR 124 A N LEU 125 A N LEU 125 A O TYR 108 A O TYR 108 A O PHE 111 A O PHE 111 A N VAL 49 A N VAL 49 A N LEU 50 A N LEU 50 A O ALA 82 A O ALA 82 1 A MET 13 -109.08 48.47 1 A MET 44 -140.99 38.81 0.242 0.175 0.189 0.184 1.60 19.7 589 12058 11453 88.2 RANDOM 1 0.0 0.0 Engh & Huber 1.60 19.7 82 1050 1 0 967 0.011 0.027 17.7 1.6 19.7 1CUO 34240 12059 1.0 1.0 0.053 1 6.8 2.8 88.2 0.192 1.60 1.63 2.1 0.739 data reduction DENZO data scaling SCALEPACK phasing AMoRE refinement REFMAC PROTEIN (129-MER) CRYSTAL STRUCTURE ANALYSIS OF ISOMER-2 AZURIN FROM METHYLOMONAS J 1 N N 2 N N 3 N N A PRO 40 A PRO 40 HELX_P A GLY 45 A GLY 45 1 1 6 A ASP 55 A ASP 55 HELX_P A HIS 65 A HIS 65 1 2 11 A ALA 66 A ALA 66 HELX_P A ASN 71 A ASN 71 5 3 6 A SER 100 A SER 100 HELX_P A LEU 102 A LEU 102 5 4 3 disulf 2.024 A CYS 3 A SG CYS 3 1_555 A CYS 26 A SG CYS 26 1_555 metalc 2.051 A CU 130 B CU CU 1_555 A HIS 117 A ND1 HIS 117 1_555 metalc 2.074 A CU 130 B CU CU 1_555 A HIS 46 A ND1 HIS 46 1_555 metalc 2.033 A CU 130 B CU CU 1_555 A CYS 112 A SG CYS 112 1_555 ELECTRON TRANSPORT BETA BARREL, periplasmic, electron transport AZUR2_METJ UNP 1 P12335 1 129 1CUO 1 129 P12335 A 1 1 129 3 5 parallel anti-parallel parallel anti-parallel anti-parallel anti-parallel A GLU 4 A GLU 4 A SER 9 A SER 9 A GLU 28 A GLU 28 A HIS 35 A HIS 35 A LYS 92 A LYS 92 A LYS 98 A LYS 98 A SER 19 A SER 19 A PRO 23 A PRO 23 A ARG 122 A ARG 122 A GLU 128 A GLU 128 A TYR 108 A TYR 108 A PHE 111 A PHE 111 A VAL 49 A VAL 49 A LYS 52 A LYS 52 A ALA 82 A ALA 82 A PHE 83 A PHE 83 BINDING SITE FOR RESIDUE CU A 130 Software 5 A GLY 45 A GLY 45 5 1_555 A HIS 46 A HIS 46 5 1_555 A CYS 112 A CYS 112 5 1_555 A HIS 117 A HIS 117 5 1_555 A MET 121 A MET 121 5 1_555 4 P 1 21 1