0.03034
0.00000
0.00609
0.00000
0.02970
0.00000
0.00000
0.00000
0.02155
0.00000
0.00000
0.00000
Inoue, T.
Nishio, N.
Kai, Y.
Suzuki, S.
Kataoka, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
2
90.00
101.35
90.00
32.960
33.670
47.340
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cu 2
63.546
COPPER (II) ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
333
117
124
10.1016/j.jmb.2003.08.002
14516747
The significance of the flexible loop in the azurin (Az-iso2) from the obligate methylotroph Methylomonas sp. strain J.
2003
UK
Biochem.J.
BIJOAK
0043
0264-6021
261
495
499
Two distinct azurins function in the electron-transport chain of the obligate methylotroph Methylomonas J
1989
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
55
307
309
10.1107/S0907444998014036
Crystallization and preliminary X-ray study of iso-2 azurin from the methylotrophic bacterium, Methylomonas J
1999
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298.0
1
IMAGE PLATE
1997-12-20
RIGAKU RAXIS IIC
SINGLE WAVELENGTH
M
x-ray
1
1.54
1.0
1.54
ROTATING ANODE
RIGAKU RU300
13822.544
PROTEIN (AZURIN ISO-2)
1
nat
polymer
63.546
COPPER (II) ION
1
syn
non-polymer
18.015
water
82
nat
water
no
no
ASCETTVTSGDTMTYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRV
IAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE
ASCETTVTSGDTMTYSTRSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRV
IAFTPIIGGGEKTSVKFKVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Methylomonas
sample
32038
Methylomonas sp. J
1
1.86
33.98
VAPOR DIFFUSION, HANGING DROP
5.0
PEG4000, SODIUM CACODYLATE, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K
298
repository
Initial release
Version format compliance
Version format compliance
1
0
2000-08-23
1
1
2008-04-27
1
2
2011-07-13
RCSB
Y
RCSB
1999-08-21
REL
REL
CU
COPPER (II) ION
HOH
water
CU
130
2
CU
CU
130
A
HOH
131
3
HOH
HOH
131
A
HOH
132
3
HOH
HOH
132
A
HOH
133
3
HOH
HOH
133
A
HOH
134
3
HOH
HOH
134
A
HOH
135
3
HOH
HOH
135
A
HOH
136
3
HOH
HOH
136
A
HOH
137
3
HOH
HOH
137
A
HOH
138
3
HOH
HOH
138
A
HOH
139
3
HOH
HOH
139
A
HOH
140
3
HOH
HOH
140
A
HOH
141
3
HOH
HOH
141
A
HOH
142
3
HOH
HOH
142
A
HOH
143
3
HOH
HOH
143
A
HOH
144
3
HOH
HOH
144
A
HOH
145
3
HOH
HOH
145
A
HOH
146
3
HOH
HOH
146
A
HOH
147
3
HOH
HOH
147
A
HOH
148
3
HOH
HOH
148
A
HOH
149
3
HOH
HOH
149
A
HOH
150
3
HOH
HOH
150
A
HOH
151
3
HOH
HOH
151
A
HOH
152
3
HOH
HOH
152
A
HOH
153
3
HOH
HOH
153
A
HOH
154
3
HOH
HOH
154
A
HOH
155
3
HOH
HOH
155
A
HOH
156
3
HOH
HOH
156
A
HOH
157
3
HOH
HOH
157
A
HOH
158
3
HOH
HOH
158
A
HOH
159
3
HOH
HOH
159
A
HOH
160
3
HOH
HOH
160
A
HOH
161
3
HOH
HOH
161
A
HOH
162
3
HOH
HOH
162
A
HOH
163
3
HOH
HOH
163
A
HOH
164
3
HOH
HOH
164
A
HOH
165
3
HOH
HOH
165
A
HOH
166
3
HOH
HOH
166
A
HOH
167
3
HOH
HOH
167
A
HOH
168
3
HOH
HOH
168
A
HOH
169
3
HOH
HOH
169
A
HOH
170
3
HOH
HOH
170
A
HOH
171
3
HOH
HOH
171
A
HOH
172
3
HOH
HOH
172
A
HOH
173
3
HOH
HOH
173
A
HOH
174
3
HOH
HOH
174
A
HOH
175
3
HOH
HOH
175
A
HOH
176
3
HOH
HOH
176
A
HOH
177
3
HOH
HOH
177
A
HOH
178
3
HOH
HOH
178
A
HOH
179
3
HOH
HOH
179
A
HOH
180
3
HOH
HOH
180
A
HOH
181
3
HOH
HOH
181
A
HOH
182
3
HOH
HOH
182
A
HOH
183
3
HOH
HOH
183
A
HOH
184
3
HOH
HOH
184
A
HOH
185
3
HOH
HOH
185
A
HOH
186
3
HOH
HOH
186
A
HOH
187
3
HOH
HOH
187
A
HOH
188
3
HOH
HOH
188
A
HOH
189
3
HOH
HOH
189
A
HOH
190
3
HOH
HOH
190
A
HOH
191
3
HOH
HOH
191
A
HOH
192
3
HOH
HOH
192
A
HOH
193
3
HOH
HOH
193
A
HOH
194
3
HOH
HOH
194
A
HOH
195
3
HOH
HOH
195
A
HOH
196
3
HOH
HOH
196
A
HOH
197
3
HOH
HOH
197
A
HOH
198
3
HOH
HOH
198
A
HOH
199
3
HOH
HOH
199
A
HOH
200
3
HOH
HOH
200
A
HOH
201
3
HOH
HOH
201
A
HOH
202
3
HOH
HOH
202
A
HOH
203
3
HOH
HOH
203
A
HOH
204
3
HOH
HOH
204
A
HOH
205
3
HOH
HOH
205
A
HOH
206
3
HOH
HOH
206
A
HOH
207
3
HOH
HOH
207
A
HOH
208
3
HOH
HOH
208
A
HOH
209
3
HOH
HOH
209
A
HOH
210
3
HOH
HOH
210
A
HOH
211
3
HOH
HOH
211
A
HOH
212
3
HOH
HOH
212
A
ALA
1
n
1
ALA
1
A
SER
2
n
2
SER
2
A
CYS
3
n
3
CYS
3
A
GLU
4
n
4
GLU
4
A
THR
5
n
5
THR
5
A
THR
6
n
6
THR
6
A
VAL
7
n
7
VAL
7
A
THR
8
n
8
THR
8
A
SER
9
n
9
SER
9
A
GLY
10
n
10
GLY
10
A
ASP
11
n
11
ASP
11
A
THR
12
n
12
THR
12
A
MET
13
n
13
MET
13
A
THR
14
n
14
THR
14
A
TYR
15
n
15
TYR
15
A
SER
16
n
16
SER
16
A
THR
17
n
17
THR
17
A
ARG
18
n
18
ARG
18
A
SER
19
n
19
SER
19
A
ILE
20
n
20
ILE
20
A
SER
21
n
21
SER
21
A
VAL
22
n
22
VAL
22
A
PRO
23
n
23
PRO
23
A
ALA
24
n
24
ALA
24
A
SER
25
n
25
SER
25
A
CYS
26
n
26
CYS
26
A
ALA
27
n
27
ALA
27
A
GLU
28
n
28
GLU
28
A
PHE
29
n
29
PHE
29
A
THR
30
n
30
THR
30
A
VAL
31
n
31
VAL
31
A
ASN
32
n
32
ASN
32
A
PHE
33
n
33
PHE
33
A
GLU
34
n
34
GLU
34
A
HIS
35
n
35
HIS
35
A
LYS
36
n
36
LYS
36
A
GLY
37
n
37
GLY
37
A
HIS
38
n
38
HIS
38
A
MET
39
n
39
MET
39
A
PRO
40
n
40
PRO
40
A
LYS
41
n
41
LYS
41
A
THR
42
n
42
THR
42
A
GLY
43
n
43
GLY
43
A
MET
44
n
44
MET
44
A
GLY
45
n
45
GLY
45
A
HIS
46
n
46
HIS
46
A
ASN
47
n
47
ASN
47
A
TRP
48
n
48
TRP
48
A
VAL
49
n
49
VAL
49
A
LEU
50
n
50
LEU
50
A
ALA
51
n
51
ALA
51
A
LYS
52
n
52
LYS
52
A
SER
53
n
53
SER
53
A
ALA
54
n
54
ALA
54
A
ASP
55
n
55
ASP
55
A
VAL
56
n
56
VAL
56
A
GLY
57
n
57
GLY
57
A
ASP
58
n
58
ASP
58
A
VAL
59
n
59
VAL
59
A
ALA
60
n
60
ALA
60
A
LYS
61
n
61
LYS
61
A
GLU
62
n
62
GLU
62
A
GLY
63
n
63
GLY
63
A
ALA
64
n
64
ALA
64
A
HIS
65
n
65
HIS
65
A
ALA
66
n
66
ALA
66
A
GLY
67
n
67
GLY
67
A
ALA
68
n
68
ALA
68
A
ASP
69
n
69
ASP
69
A
ASN
70
n
70
ASN
70
A
ASN
71
n
71
ASN
71
A
PHE
72
n
72
PHE
72
A
VAL
73
n
73
VAL
73
A
THR
74
n
74
THR
74
A
PRO
75
n
75
PRO
75
A
GLY
76
n
76
GLY
76
A
ASP
77
n
77
ASP
77
A
LYS
78
n
78
LYS
78
A
ARG
79
n
79
ARG
79
A
VAL
80
n
80
VAL
80
A
ILE
81
n
81
ILE
81
A
ALA
82
n
82
ALA
82
A
PHE
83
n
83
PHE
83
A
THR
84
n
84
THR
84
A
PRO
85
n
85
PRO
85
A
ILE
86
n
86
ILE
86
A
ILE
87
n
87
ILE
87
A
GLY
88
n
88
GLY
88
A
GLY
89
n
89
GLY
89
A
GLY
90
n
90
GLY
90
A
GLU
91
n
91
GLU
91
A
LYS
92
n
92
LYS
92
A
THR
93
n
93
THR
93
A
SER
94
n
94
SER
94
A
VAL
95
n
95
VAL
95
A
LYS
96
n
96
LYS
96
A
PHE
97
n
97
PHE
97
A
LYS
98
n
98
LYS
98
A
VAL
99
n
99
VAL
99
A
SER
100
n
100
SER
100
A
ALA
101
n
101
ALA
101
A
LEU
102
n
102
LEU
102
A
SER
103
n
103
SER
103
A
LYS
104
n
104
LYS
104
A
ASP
105
n
105
ASP
105
A
GLU
106
n
106
GLU
106
A
ALA
107
n
107
ALA
107
A
TYR
108
n
108
TYR
108
A
THR
109
n
109
THR
109
A
TYR
110
n
110
TYR
110
A
PHE
111
n
111
PHE
111
A
CYS
112
n
112
CYS
112
A
SER
113
n
113
SER
113
A
TYR
114
n
114
TYR
114
A
PRO
115
n
115
PRO
115
A
GLY
116
n
116
GLY
116
A
HIS
117
n
117
HIS
117
A
PHE
118
n
118
PHE
118
A
SER
119
n
119
SER
119
A
MET
120
n
120
MET
120
A
MET
121
n
121
MET
121
A
ARG
122
n
122
ARG
122
A
GLY
123
n
123
GLY
123
A
THR
124
n
124
THR
124
A
LEU
125
n
125
LEU
125
A
LYS
126
n
126
LYS
126
A
LEU
127
n
127
LEU
127
A
GLU
128
n
128
GLU
128
A
GLU
129
n
129
GLU
129
A
author_defined_assembly
1
monomeric
A
HIS
117
A
ND1
HIS
117
1_555
A
CU
130
B
CU
CU
1_555
A
HIS
46
A
ND1
HIS
46
1_555
102.9
A
HIS
117
A
ND1
HIS
117
1_555
A
CU
130
B
CU
CU
1_555
A
CYS
112
A
SG
CYS
112
1_555
115.7
A
HIS
46
A
ND1
HIS
46
1_555
A
CU
130
B
CU
CU
1_555
A
CYS
112
A
SG
CYS
112
1_555
137.4
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
THR
5
A
N
THR
5
A
O
THR
30
A
O
THR
30
A
N
PHE
33
A
N
PHE
33
A
O
THR
93
A
O
THR
93
A
N
ILE
20
A
N
ILE
20
A
O
THR
124
A
O
THR
124
A
N
LEU
125
A
N
LEU
125
A
O
TYR
108
A
O
TYR
108
A
O
PHE
111
A
O
PHE
111
A
N
VAL
49
A
N
VAL
49
A
N
LEU
50
A
N
LEU
50
A
O
ALA
82
A
O
ALA
82
1
A
MET
13
-109.08
48.47
1
A
MET
44
-140.99
38.81
0.242
0.175
0.189
0.184
1.60
19.7
589
12058
11453
88.2
RANDOM
1
0.0
0.0
Engh & Huber
1.60
19.7
82
1050
1
0
967
0.011
0.027
17.7
1.6
19.7
1CUO
34240
12059
1.0
1.0
0.053
1
6.8
2.8
88.2
0.192
1.60
1.63
2.1
0.739
data reduction
DENZO
data scaling
SCALEPACK
phasing
AMoRE
refinement
REFMAC
PROTEIN (129-MER)
CRYSTAL STRUCTURE ANALYSIS OF ISOMER-2 AZURIN FROM METHYLOMONAS J
1
N
N
2
N
N
3
N
N
A
PRO
40
A
PRO
40
HELX_P
A
GLY
45
A
GLY
45
1
1
6
A
ASP
55
A
ASP
55
HELX_P
A
HIS
65
A
HIS
65
1
2
11
A
ALA
66
A
ALA
66
HELX_P
A
ASN
71
A
ASN
71
5
3
6
A
SER
100
A
SER
100
HELX_P
A
LEU
102
A
LEU
102
5
4
3
disulf
2.024
A
CYS
3
A
SG
CYS
3
1_555
A
CYS
26
A
SG
CYS
26
1_555
metalc
2.051
A
CU
130
B
CU
CU
1_555
A
HIS
117
A
ND1
HIS
117
1_555
metalc
2.074
A
CU
130
B
CU
CU
1_555
A
HIS
46
A
ND1
HIS
46
1_555
metalc
2.033
A
CU
130
B
CU
CU
1_555
A
CYS
112
A
SG
CYS
112
1_555
ELECTRON TRANSPORT
BETA BARREL, periplasmic, electron transport
AZUR2_METJ
UNP
1
P12335
1
129
1CUO
1
129
P12335
A
1
1
129
3
5
parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
4
A
GLU
4
A
SER
9
A
SER
9
A
GLU
28
A
GLU
28
A
HIS
35
A
HIS
35
A
LYS
92
A
LYS
92
A
LYS
98
A
LYS
98
A
SER
19
A
SER
19
A
PRO
23
A
PRO
23
A
ARG
122
A
ARG
122
A
GLU
128
A
GLU
128
A
TYR
108
A
TYR
108
A
PHE
111
A
PHE
111
A
VAL
49
A
VAL
49
A
LYS
52
A
LYS
52
A
ALA
82
A
ALA
82
A
PHE
83
A
PHE
83
BINDING SITE FOR RESIDUE CU A 130
Software
5
A
GLY
45
A
GLY
45
5
1_555
A
HIS
46
A
HIS
46
5
1_555
A
CYS
112
A
CYS
112
5
1_555
A
HIS
117
A
HIS
117
5
1_555
A
MET
121
A
MET
121
5
1_555
4
P 1 21 1