0.012107
0.000000
0.000000
0.000000
0.012107
0.000000
0.000000
0.000000
0.012107
0.00000
0.00000
0.00000
Kerfeld, C.A.
Yeates, T.O.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
24
90.00
90.00
90.00
82.600
82.600
82.600
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
Cd 2
112.411
CADMIUM ION
non-polymer
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C34 H34 Fe N4 O4
618.503
HEME C
non-polymer
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
250
627
647
10.1006/jmbi.1995.0404
7623381
The structure of chloroplast cytochrome c6 at 1.9 A resolution: evidence for functional oligomerization.
1995
US
J.Biol.Chem.
JBCHA3
0071
0021-9258
266
15060
Isolation and Structural Characterization of the Chlamydomonas Reinhardtii Gene for Cytochrome C6
1991
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
IMAGE PLATE
1991-09
RIGAKU RAXIS IIC
M
x-ray
1
1.54
1.0
1.54
9810.996
CYTOCHROME C6
1
nat
polymer
112.411
CADMIUM ION
4
syn
non-polymer
618.503
HEME C
1
syn
non-polymer
18.015
water
64
nat
water
CYTOCHROME C553
no
no
ADLALGAQVFNGNCAACHMGGRNSVMPEKTLDKAALEQYLDGGFKVESIIYQVENGKGAMPAWADRLSEEEIQAVAEYVF
KQATDAAWKY
ADLALGAQVFNGNCAACHMGGRNSVMPEKTLDKAALEQYLDGGFKVESIIYQVENGKGAMPAWADRLSEEEIQAVAEYVF
KQATDAAWKY
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Chlamydomonas
sample
3055
CHLOROPLAST
Chlamydomonas reinhardtii
CC124
2.39
48.60
atom_site
chem_comp
entity
pdbx_database_status
pdbx_entity_nonpoly
pdbx_nonpoly_scheme
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Atomic model
Atomic model
Data collection
Derived calculations
Non-polymer description
Other
Structure summary
1
0
1996-01-29
1
1
2008-03-24
1
2
2011-07-13
1
3
2011-11-16
2
0
2021-03-10
_atom_site.B_iso_or_equiv
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.type_symbol
_chem_comp.formula
_chem_comp.formula_weight
_chem_comp.id
_chem_comp.name
_chem_comp.pdbx_synonyms
_entity.formula_weight
_entity.pdbx_description
_pdbx_database_status.process_site
_pdbx_entity_nonpoly.comp_id
_pdbx_entity_nonpoly.name
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_symmetry
_struct_site.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
SHEET
A SHORT TWO-STRANDED ANTI-PARALLEL BETA-SHEET IS FORMED BY
RESIDUES 54 - 63, ENCLOSING A TYPE II' TURN BETWEEN
RESIDUES 57 AND 60. THERE ARE TWO INTERSTRAND HYDROGEN
BONDS BETWEEN RESIDUES 57 AND 60.
Y
BNL
1995-05-09
REL
REL
CD
CADMIUM ION
HEC
HEME C
HOH
water
CD
300
2
CD
CD
300
A
CD
301
2
CD
CD
301
A
CD
302
2
CD
CD
302
A
CD
303
2
CD
CD
303
A
HEM
200
3
HEC
HEC
200
A
HOH
400
4
HOH
HOH
400
A
HOH
401
4
HOH
HOH
401
A
HOH
402
4
HOH
HOH
402
A
HOH
403
4
HOH
HOH
403
A
HOH
404
4
HOH
HOH
404
A
HOH
405
4
HOH
HOH
405
A
HOH
406
4
HOH
HOH
406
A
HOH
407
4
HOH
HOH
407
A
HOH
408
4
HOH
HOH
408
A
HOH
409
4
HOH
HOH
409
A
HOH
410
4
HOH
HOH
410
A
HOH
411
4
HOH
HOH
411
A
HOH
412
4
HOH
HOH
412
A
HOH
413
4
HOH
HOH
413
A
HOH
414
4
HOH
HOH
414
A
HOH
415
4
HOH
HOH
415
A
HOH
416
4
HOH
HOH
416
A
HOH
417
4
HOH
HOH
417
A
HOH
418
4
HOH
HOH
418
A
HOH
419
4
HOH
HOH
419
A
HOH
420
4
HOH
HOH
420
A
HOH
421
4
HOH
HOH
421
A
HOH
422
4
HOH
HOH
422
A
HOH
423
4
HOH
HOH
423
A
HOH
424
4
HOH
HOH
424
A
HOH
425
4
HOH
HOH
425
A
HOH
426
4
HOH
HOH
426
A
HOH
427
4
HOH
HOH
427
A
HOH
428
4
HOH
HOH
428
A
HOH
429
4
HOH
HOH
429
A
HOH
430
4
HOH
HOH
430
A
HOH
431
4
HOH
HOH
431
A
HOH
432
4
HOH
HOH
432
A
HOH
433
4
HOH
HOH
433
A
HOH
434
4
HOH
HOH
434
A
HOH
435
4
HOH
HOH
435
A
HOH
436
4
HOH
HOH
436
A
HOH
437
4
HOH
HOH
437
A
HOH
438
4
HOH
HOH
438
A
HOH
439
4
HOH
HOH
439
A
HOH
440
4
HOH
HOH
440
A
HOH
441
4
HOH
HOH
441
A
HOH
442
4
HOH
HOH
442
A
HOH
443
4
HOH
HOH
443
A
HOH
444
4
HOH
HOH
444
A
HOH
445
4
HOH
HOH
445
A
HOH
446
4
HOH
HOH
446
A
HOH
447
4
HOH
HOH
447
A
HOH
448
4
HOH
HOH
448
A
HOH
449
4
HOH
HOH
449
A
HOH
450
4
HOH
HOH
450
A
HOH
451
4
HOH
HOH
451
A
HOH
452
4
HOH
HOH
452
A
HOH
453
4
HOH
HOH
453
A
HOH
454
4
HOH
HOH
454
A
HOH
455
4
HOH
HOH
455
A
HOH
456
4
HOH
HOH
456
A
HOH
457
4
HOH
HOH
457
A
HOH
458
4
HOH
HOH
458
A
HOH
459
4
HOH
HOH
459
A
HOH
460
4
HOH
HOH
460
A
HOH
461
4
HOH
HOH
461
A
HOH
462
4
HOH
HOH
462
A
HOH
463
4
HOH
HOH
463
A
ALA
1
n
1
ALA
1
A
ASP
2
n
2
ASP
2
A
LEU
3
n
3
LEU
3
A
ALA
4
n
4
ALA
4
A
LEU
5
n
5
LEU
5
A
GLY
6
n
6
GLY
6
A
ALA
7
n
7
ALA
7
A
GLN
8
n
8
GLN
8
A
VAL
9
n
9
VAL
9
A
PHE
10
n
10
PHE
10
A
ASN
11
n
11
ASN
11
A
GLY
12
n
12
GLY
12
A
ASN
13
n
13
ASN
13
A
CYS
14
n
14
CYS
14
A
ALA
15
n
15
ALA
15
A
ALA
16
n
16
ALA
16
A
CYS
17
n
17
CYS
17
A
HIS
18
n
18
HIS
18
A
MET
19
n
19
MET
19
A
GLY
20
n
20
GLY
20
A
GLY
21
n
21
GLY
21
A
ARG
22
n
22
ARG
22
A
ASN
23
n
23
ASN
23
A
SER
24
n
24
SER
24
A
VAL
25
n
25
VAL
25
A
MET
26
n
26
MET
26
A
PRO
27
n
27
PRO
27
A
GLU
28
n
28
GLU
28
A
LYS
29
n
29
LYS
29
A
THR
30
n
30
THR
30
A
LEU
31
n
31
LEU
31
A
ASP
32
n
32
ASP
32
A
LYS
33
n
33
LYS
33
A
ALA
34
n
34
ALA
34
A
ALA
35
n
35
ALA
35
A
LEU
36
n
36
LEU
36
A
GLU
37
n
37
GLU
37
A
GLN
38
n
38
GLN
38
A
TYR
39
n
39
TYR
39
A
LEU
40
n
40
LEU
40
A
ASP
41
n
41
ASP
41
A
GLY
42
n
42
GLY
42
A
GLY
43
n
43
GLY
43
A
PHE
44
n
44
PHE
44
A
LYS
45
n
45
LYS
45
A
VAL
46
n
46
VAL
46
A
GLU
47
n
47
GLU
47
A
SER
48
n
48
SER
48
A
ILE
49
n
49
ILE
49
A
ILE
50
n
50
ILE
50
A
TYR
51
n
51
TYR
51
A
GLN
52
n
52
GLN
52
A
VAL
53
n
53
VAL
53
A
GLU
54
n
54
GLU
54
A
ASN
55
n
55
ASN
55
A
GLY
56
n
56
GLY
56
A
LYS
57
n
57
LYS
57
A
GLY
58
n
58
GLY
58
A
ALA
59
n
59
ALA
59
A
MET
60
n
60
MET
60
A
PRO
61
n
61
PRO
61
A
ALA
62
n
62
ALA
62
A
TRP
63
n
63
TRP
63
A
ALA
64
n
64
ALA
64
A
ASP
65
n
65
ASP
65
A
ARG
66
n
66
ARG
66
A
LEU
67
n
67
LEU
67
A
SER
68
n
68
SER
68
A
GLU
69
n
69
GLU
69
A
GLU
70
n
70
GLU
70
A
GLU
71
n
71
GLU
71
A
ILE
72
n
72
ILE
72
A
GLN
73
n
73
GLN
73
A
ALA
74
n
74
ALA
74
A
VAL
75
n
75
VAL
75
A
ALA
76
n
76
ALA
76
A
GLU
77
n
77
GLU
77
A
TYR
78
n
78
TYR
78
A
VAL
79
n
79
VAL
79
A
PHE
80
n
80
PHE
80
A
LYS
81
n
81
LYS
81
A
GLN
82
n
82
GLN
82
A
ALA
83
n
83
ALA
83
A
THR
84
n
84
THR
84
A
ASP
85
n
85
ASP
85
A
ALA
86
n
86
ALA
86
A
ALA
87
n
87
ALA
87
A
TRP
88
n
88
TRP
88
A
LYS
89
n
89
LYS
89
A
n
90
90
A
author_defined_assembly
1
monomeric
A
HIS
18
A
NE2
HIS
18
1_555
A
HEC
200
F
FE
HEC
1_555
A
HEC
200
F
NA
HEC
1_555
88.0
A
HIS
18
A
NE2
HIS
18
1_555
A
HEC
200
F
FE
HEC
1_555
A
HEC
200
F
NB
HEC
1_555
92.6
A
HEC
200
F
NA
HEC
1_555
A
HEC
200
F
FE
HEC
1_555
A
HEC
200
F
NB
HEC
1_555
90.9
A
HIS
18
A
NE2
HIS
18
1_555
A
HEC
200
F
FE
HEC
1_555
A
HEC
200
F
NC
HEC
1_555
89.8
A
HEC
200
F
NA
HEC
1_555
A
HEC
200
F
FE
HEC
1_555
A
HEC
200
F
NC
HEC
1_555
177.8
A
HEC
200
F
NB
HEC
1_555
A
HEC
200
F
FE
HEC
1_555
A
HEC
200
F
NC
HEC
1_555
89.4
A
HIS
18
A
NE2
HIS
18
1_555
A
HEC
200
F
FE
HEC
1_555
A
HEC
200
F
ND
HEC
1_555
90.0
A
HEC
200
F
NA
HEC
1_555
A
HEC
200
F
FE
HEC
1_555
A
HEC
200
F
ND
HEC
1_555
92.1
A
HEC
200
F
NB
HEC
1_555
A
HEC
200
F
FE
HEC
1_555
A
HEC
200
F
ND
HEC
1_555
176.1
A
HEC
200
F
NC
HEC
1_555
A
HEC
200
F
FE
HEC
1_555
A
HEC
200
F
ND
HEC
1_555
87.7
A
HIS
18
A
NE2
HIS
18
1_555
A
HEC
200
F
FE
HEC
1_555
A
MET
60
A
SD
MET
60
1_555
173.2
A
HEC
200
F
NA
HEC
1_555
A
HEC
200
F
FE
HEC
1_555
A
MET
60
A
SD
MET
60
1_555
85.1
A
HEC
200
F
NB
HEC
1_555
A
HEC
200
F
FE
HEC
1_555
A
MET
60
A
SD
MET
60
1_555
87.7
A
HEC
200
F
NC
HEC
1_555
A
HEC
200
F
FE
HEC
1_555
A
MET
60
A
SD
MET
60
1_555
97.1
A
HEC
200
F
ND
HEC
1_555
A
HEC
200
F
FE
HEC
1_555
A
MET
60
A
SD
MET
60
1_555
90.1
A
GLU
37
A
OE2
GLU
37
21_545
A
CD
301
C
CD
CD
1_555
A
GLU
54
A
OE1
GLU
54
1_555
80.0
A
GLU
37
A
OE2
GLU
37
21_545
A
CD
301
C
CD
CD
1_555
A
GLU
54
A
OE2
GLU
54
1_555
124.4
A
GLU
54
A
OE1
GLU
54
1_555
A
CD
301
C
CD
CD
1_555
A
GLU
54
A
OE2
GLU
54
1_555
45.2
A
GLU
37
A
OE2
GLU
37
21_545
A
CD
301
C
CD
CD
1_555
A
HOH
402
G
O
HOH
1_555
79.8
A
GLU
54
A
OE1
GLU
54
1_555
A
CD
301
C
CD
CD
1_555
A
HOH
402
G
O
HOH
1_555
159.8
A
GLU
54
A
OE2
GLU
54
1_555
A
CD
301
C
CD
CD
1_555
A
HOH
402
G
O
HOH
1_555
154.6
A
GLU
37
A
OE2
GLU
37
21_545
A
CD
301
C
CD
CD
1_555
A
HOH
419
G
O
HOH
21_545
90.0
A
GLU
54
A
OE1
GLU
54
1_555
A
CD
301
C
CD
CD
1_555
A
HOH
419
G
O
HOH
21_545
81.0
A
GLU
54
A
OE2
GLU
54
1_555
A
CD
301
C
CD
CD
1_555
A
HOH
419
G
O
HOH
21_545
89.7
A
HOH
402
G
O
HOH
1_555
A
CD
301
C
CD
CD
1_555
A
HOH
419
G
O
HOH
21_545
98.8
A
ASP
41
A
OD1
ASP
41
22_546
A
CD
300
B
CD
CD
1_555
A
ASP
41
A
OD2
ASP
41
22_546
52.5
A
ASP
41
A
OD1
ASP
41
22_546
A
CD
300
B
CD
CD
1_555
A
GLU
71
A
OE2
GLU
71
1_555
105.7
A
ASP
41
A
OD2
ASP
41
22_546
A
CD
300
B
CD
CD
1_555
A
GLU
71
A
OE2
GLU
71
1_555
158.1
A
ASP
41
A
OD1
ASP
41
22_546
A
CD
300
B
CD
CD
1_555
A
GLU
71
A
OE1
GLU
71
1_555
86.3
A
ASP
41
A
OD2
ASP
41
22_546
A
CD
300
B
CD
CD
1_555
A
GLU
71
A
OE1
GLU
71
1_555
120.5
A
GLU
71
A
OE2
GLU
71
1_555
A
CD
300
B
CD
CD
1_555
A
GLU
71
A
OE1
GLU
71
1_555
49.1
A
ASP
41
A
OD1
ASP
41
22_546
A
CD
300
B
CD
CD
1_555
A
HOH
425
G
O
HOH
1_555
123.6
A
ASP
41
A
OD2
ASP
41
22_546
A
CD
300
B
CD
CD
1_555
A
HOH
425
G
O
HOH
1_555
80.2
A
GLU
71
A
OE2
GLU
71
1_555
A
CD
300
B
CD
CD
1_555
A
HOH
425
G
O
HOH
1_555
117.4
A
GLU
71
A
OE1
GLU
71
1_555
A
CD
300
B
CD
CD
1_555
A
HOH
425
G
O
HOH
1_555
95.3
A
ASP
41
A
OD1
ASP
41
22_546
A
CD
300
B
CD
CD
1_555
A
HOH
435
G
O
HOH
1_555
85.5
A
ASP
41
A
OD2
ASP
41
22_546
A
CD
300
B
CD
CD
1_555
A
HOH
435
G
O
HOH
1_555
98.6
A
GLU
71
A
OE2
GLU
71
1_555
A
CD
300
B
CD
CD
1_555
A
HOH
435
G
O
HOH
1_555
78.1
A
GLU
71
A
OE1
GLU
71
1_555
A
CD
300
B
CD
CD
1_555
A
HOH
435
G
O
HOH
1_555
121.3
A
HOH
425
G
O
HOH
1_555
A
CD
300
B
CD
CD
1_555
A
HOH
435
G
O
HOH
1_555
135.8
A
GLU
69
A
OE1
GLU
69
1_555
A
CD
302
D
CD
CD
1_555
A
GLU
69
A
OE1
GLU
69
3_657
140.6
A
GLU
69
A
OE1
GLU
69
1_555
A
CD
302
D
CD
CD
1_555
A
HOH
402
G
O
HOH
1_555
107.6
A
GLU
69
A
OE1
GLU
69
3_657
A
CD
302
D
CD
CD
1_555
A
HOH
402
G
O
HOH
1_555
84.2
A
GLU
69
A
OE1
GLU
69
1_555
A
CD
302
D
CD
CD
1_555
A
HOH
402
G
O
HOH
3_657
84.2
A
GLU
69
A
OE1
GLU
69
3_657
A
CD
302
D
CD
CD
1_555
A
HOH
402
G
O
HOH
3_657
107.6
A
HOH
402
G
O
HOH
1_555
A
CD
302
D
CD
CD
1_555
A
HOH
402
G
O
HOH
3_657
145.1
A
GLU
69
A
OE1
GLU
69
1_555
A
CD
302
D
CD
CD
1_555
A
HOH
463
G
O
HOH
1_555
70.3
A
GLU
69
A
OE1
GLU
69
3_657
A
CD
302
D
CD
CD
1_555
A
HOH
463
G
O
HOH
1_555
70.3
A
HOH
402
G
O
HOH
1_555
A
CD
302
D
CD
CD
1_555
A
HOH
463
G
O
HOH
1_555
107.5
A
HOH
402
G
O
HOH
3_657
A
CD
302
D
CD
CD
1_555
A
HOH
463
G
O
HOH
1_555
107.5
A
GLU
69
A
OE1
GLU
69
1_555
A
CD
302
D
CD
CD
1_555
A
HOH
463
G
O
HOH
3_657
70.3
A
GLU
69
A
OE1
GLU
69
3_657
A
CD
302
D
CD
CD
1_555
A
HOH
463
G
O
HOH
3_657
70.3
A
HOH
402
G
O
HOH
1_555
A
CD
302
D
CD
CD
1_555
A
HOH
463
G
O
HOH
3_657
107.5
A
HOH
402
G
O
HOH
3_657
A
CD
302
D
CD
CD
1_555
A
HOH
463
G
O
HOH
3_657
107.5
A
HOH
463
G
O
HOH
1_555
A
CD
302
D
CD
CD
1_555
A
HOH
463
G
O
HOH
3_657
0.0
A
HOH
409
G
O
HOH
1_555
A
CD
303
E
CD
CD
1_555
A
HOH
423
G
O
HOH
17_445
131.8
A
HOH
409
G
O
HOH
1_555
A
CD
303
E
CD
CD
1_555
A
HOH
453
G
O
HOH
17_445
121.6
A
HOH
423
G
O
HOH
17_445
A
CD
303
E
CD
CD
1_555
A
HOH
453
G
O
HOH
17_445
104.2
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
CD
302
D
CD
1
A
HOH
413
G
HOH
1
A
HOH
418
G
HOH
1
A
HOH
432
G
HOH
1
A
HOH
433
G
HOH
1
A
HOH
434
G
HOH
1
A
HOH
437
G
HOH
1
A
HOH
452
G
HOH
1
A
HOH
463
G
HOH
1
A
CD
GLU
47
A
CD
GLU
47
1
Y
1
A
OE1
GLU
47
A
OE1
GLU
47
1
Y
1
A
OE2
GLU
47
A
OE2
GLU
47
1
Y
1
A
CZ
ARG
66
A
CZ
ARG
66
1
Y
1
A
NH1
ARG
66
A
NH1
ARG
66
1
Y
1
A
NH2
ARG
66
A
NH2
ARG
66
1
Y
1
A
CG
LYS
89
A
CG
LYS
89
1
Y
1
A
CD
LYS
89
A
CD
LYS
89
1
Y
1
A
CE
LYS
89
A
CE
LYS
89
1
Y
1
A
NZ
LYS
89
A
NZ
LYS
89
1
Y
1
A
TYR
90
A
TYR
90
1
Y
1
-10.57
1.70
113.60
103.03
A
A
A
CA
CB
CG
HIS
HIS
HIS
18
18
18
N
1
A
ASP
2
-171.61
-56.85
1
A
LYS
57
-171.50
125.66
23.9
NO RESTRAINTS WERE PLACED ON CADMIUM IONS DURING
REFINEMENT. CONSEQUENTLY THERE ARE CLOSE CONTACTS BETWEEN
SOLVENT MOLECULES AND SIDE-CHAIN ATOMS INVOLVED IN CADMIUM
LIGATION.
0.197
0.197
1.9
10.
6412
1
0.
0.25
1.9
10.
64
776
47
0
665
0.019
1.929
1.5
2.5
2.0
4.0
1.9
41.3
1CYI
6412
0.
0.064
1
3.03
84.8
model building
X-PLOR
3.1
refinement
X-PLOR
3.1
data reduction
R-AXIS
data reduction
MSC
phasing
X-PLOR
3.1
CYTOCHROME C6, PROTOPORPHYRIN IX CONTAINING FE
CYTOCHROME C6
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
4
N
N
A
LEU
3
A
LEU
3
HELX_P
A
ASN
13
A
ASN
13
1
1
11
A
LYS
33
A
LYS
33
HELX_P
A
TYR
39
A
TYR
39
1
2
7
A
VAL
46
A
VAL
46
HELX_P
A
ASN
55
A
ASN
55
1
3
10
A
GLU
69
A
GLU
69
HELX_P
A
ASP
85
A
ASP
85
1
4
17
covale
1.789
none
A
CYS
14
A
SG
CYS
14
1_555
A
HEC
200
F
CAB
HEC
1_555
covale
1.841
none
A
CYS
17
A
SG
CYS
17
1_555
A
HEC
200
F
CAC
HEC
1_555
metalc
2.115
A
HIS
18
A
NE2
HIS
18
1_555
A
HEC
200
F
FE
HEC
1_555
metalc
2.126
A
GLU
37
A
OE2
GLU
37
21_545
A
CD
301
C
CD
CD
1_555
metalc
2.494
A
ASP
41
A
OD1
ASP
41
22_546
A
CD
300
B
CD
CD
1_555
metalc
2.474
A
ASP
41
A
OD2
ASP
41
22_546
A
CD
300
B
CD
CD
1_555
metalc
3.073
A
GLU
54
A
OE1
GLU
54
1_555
A
CD
301
C
CD
CD
1_555
metalc
2.430
A
GLU
54
A
OE2
GLU
54
1_555
A
CD
301
C
CD
CD
1_555
metalc
2.288
A
MET
60
A
SD
MET
60
1_555
A
HEC
200
F
FE
HEC
1_555
metalc
2.435
A
GLU
69
A
OE1
GLU
69
1_555
A
CD
302
D
CD
CD
1_555
metalc
2.435
A
GLU
69
A
OE1
GLU
69
3_657
A
CD
302
D
CD
CD
1_555
metalc
2.329
A
GLU
71
A
OE2
GLU
71
1_555
A
CD
300
B
CD
CD
1_555
metalc
2.826
A
GLU
71
A
OE1
GLU
71
1_555
A
CD
300
B
CD
CD
1_555
metalc
1.906
A
CD
300
B
CD
CD
1_555
A
HOH
425
G
O
HOH
1_555
metalc
1.822
A
CD
300
B
CD
CD
1_555
A
HOH
435
G
O
HOH
1_555
metalc
2.676
A
CD
301
C
CD
CD
1_555
A
HOH
402
G
O
HOH
1_555
metalc
1.814
A
CD
301
C
CD
CD
1_555
A
HOH
419
G
O
HOH
21_545
metalc
1.839
A
CD
302
D
CD
CD
1_555
A
HOH
402
G
O
HOH
1_555
metalc
1.839
A
CD
302
D
CD
CD
1_555
A
HOH
402
G
O
HOH
3_657
metalc
1.819
A
CD
302
D
CD
CD
1_555
A
HOH
463
G
O
HOH
1_555
metalc
1.819
A
CD
302
D
CD
CD
1_555
A
HOH
463
G
O
HOH
3_657
metalc
1.876
A
CD
303
E
CD
CD
1_555
A
HOH
409
G
O
HOH
1_555
metalc
1.832
A
CD
303
E
CD
CD
1_555
A
HOH
423
G
O
HOH
17_445
metalc
1.834
A
CD
303
E
CD
CD
1_555
A
HOH
453
G
O
HOH
17_445
ELECTRON TRANSPORT PROTEIN (CYTOCHROME)
PHOTOSYNTHESIS, CHLAMYDOMONAS, ELECTRON TRANSPORT PROTEIN (CYTOCHROME)
CYC6_CHLRE
UNP
1
1
P08197
MLQLANRSVRAKAARASQSARSVSCAAAKRGADVAPLTSALAVTASILLTTGAASASAADLALGAQVFNGNCAACHMGGR
NSVMPEKTLDKAALEQYLDGGFKVESIIYQVENGKGAMPAWADRLSEEEIQAVAEYVFKQATDAAWKY
59
148
1CYI
1
90
P08197
A
1
1
90
BINDING SITE FOR RESIDUE CD A 300
A
CD
300
Software
4
BINDING SITE FOR RESIDUE CD A 301
A
CD
301
Software
4
BINDING SITE FOR RESIDUE CD A 302
A
CD
302
Software
6
BINDING SITE FOR RESIDUE CD A 303
A
CD
303
Software
3
BINDING SITE FOR RESIDUE HEC A 200
A
HEC
200
Software
18
A
ASP
41
A
ASP
41
4
22_546
A
GLU
71
A
GLU
71
4
1_555
A
HOH
425
G
HOH
4
1_555
A
HOH
435
G
HOH
4
1_555
A
GLU
37
A
GLU
37
4
21_545
A
GLU
54
A
GLU
54
4
1_555
A
HOH
402
G
HOH
4
1_555
A
HOH
419
G
HOH
4
21_545
A
GLU
69
A
GLU
69
6
3_657
A
GLU
69
A
GLU
69
6
1_555
A
HOH
402
G
HOH
6
1_555
A
HOH
402
G
HOH
6
3_657
A
HOH
463
G
HOH
6
3_657
A
HOH
463
G
HOH
6
1_555
A
HOH
409
G
HOH
3
1_555
A
HOH
423
G
HOH
3
17_445
A
HOH
453
G
HOH
3
17_445
A
ASN
13
A
ASN
13
18
1_555
A
CYS
14
A
CYS
14
18
1_555
A
CYS
17
A
CYS
17
18
1_555
A
HIS
18
A
HIS
18
18
1_555
A
ASN
23
A
ASN
23
18
1_555
A
VAL
25
A
VAL
25
18
1_555
A
LYS
29
A
LYS
29
18
1_555
A
THR
30
A
THR
30
18
1_555
A
LEU
36
A
LEU
36
18
1_555
A
TYR
39
A
TYR
39
18
1_555
A
GLN
52
A
GLN
52
18
1_555
A
VAL
53
A
VAL
53
18
1_555
A
LYS
57
A
LYS
57
18
1_555
A
MET
60
A
MET
60
18
1_555
A
TRP
63
A
TRP
63
18
1_555
A
HOH
408
G
HOH
18
1_555
A
HOH
422
G
HOH
18
1_555
A
HOH
451
G
HOH
18
1_555
197
I 2 3