0.015024 0.000000 0.000000 0.000000 0.015024 0.000000 0.000000 0.000000 0.012762 0.000000 0.000000 0.000000 Lubkowski, J. Dauter, Z. Yang, F. Alexandratos, J. Merkel, G. Skalka, A.M. Wlodawer, A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 66.560 66.560 78.360 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C6 H8 O7 192.124 CITRIC ACID non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking O4 S -2 96.063 SULFATE ION non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N C N 75 N O N 76 N O N 77 N C N 78 N C N 79 N O N 80 N C N 81 N C N 82 N O N 83 N O N 84 N C N 85 N O N 86 N O N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N H N 95 N N N 96 R C N 97 N C N 98 N O N 99 N C N 100 N S N 101 N O N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N N N 110 S C N 111 N C N 112 N O N 113 N C N 114 N C N 115 N C N 116 N O N 117 N N N 118 N O N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N N N 130 S C N 131 N C N 132 N O N 133 N C N 134 N C N 135 N C N 136 N O N 137 N O N 138 N O N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N H N 146 N H N 147 N H N 148 N N N 149 N C N 150 N C N 151 N O N 152 N O N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N N N 159 S C N 160 N C N 161 N O N 162 N C Y 163 N C Y 164 N N Y 165 N C Y 166 N C Y 167 N N N 168 N O N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N O N 180 N H N 181 N H N 182 N N N 183 S C N 184 N C N 185 N O N 186 S C N 187 N C N 188 N C N 189 N C N 190 N O N 191 N H N 192 N H N 193 N H N 194 N H N 195 N H N 196 N H N 197 N H N 198 N H N 199 N H N 200 N H N 201 N H N 202 N H N 203 N H N 204 N N N 205 S C N 206 N C N 207 N O N 208 N C N 209 N C N 210 N C N 211 N C N 212 N O N 213 N H N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N H N 220 N H N 221 N H N 222 N H N 223 N H N 224 N H N 225 N H N 226 N N N 227 S C N 228 N C N 229 N O N 230 N C N 231 N C N 232 N C N 233 N C N 234 N N N 235 N O N 236 N H N 237 N H N 238 N H N 239 N H N 240 N H N 241 N H N 242 N H N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N N N 252 S C N 253 N C N 254 N O N 255 N C N 256 N C N 257 N S N 258 N C N 259 N O N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N H N 267 N H N 268 N H N 269 N H N 270 N H N 271 N N N 272 S C N 273 N C N 274 N O N 275 N C Y 276 N C Y 277 N C Y 278 N C Y 279 N C Y 280 N C Y 281 N C N 282 N O N 283 N H N 284 N H N 285 N H N 286 N H N 287 N H N 288 N H N 289 N H N 290 N H N 291 N H N 292 N H N 293 N H N 294 N N N 295 S C N 296 N C N 297 N O N 298 N C N 299 N C N 300 N C N 301 N O N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N N N 312 S C N 313 N C N 314 N O N 315 N C N 316 N O N 317 N O N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N S N 326 N O N 327 N O N 328 N O N 329 N O N 330 N N N 331 S C N 332 N C N 333 N O N 334 R C N 335 N O N 336 N C N 337 N O N 338 N H N 339 N H N 340 N H N 341 N H N 342 N H N 343 N H N 344 N H N 345 N H N 346 N H N 347 N N N 348 S C N 349 N C N 350 N O N 351 N C Y 352 N C Y 353 N C Y 354 N C Y 355 N N Y 356 N C Y 357 N C Y 358 N C Y 359 N C Y 360 N C N 361 N O N 362 N H N 363 N H N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N H N 374 N N N 375 S C N 376 N C N 377 N O N 378 N C Y 379 N C Y 380 N C Y 381 N C Y 382 N C Y 383 N C Y 384 N C N 385 N O N 386 N O N 387 N H N 388 N H N 389 N H N 390 N H N 391 N H N 392 N H N 393 N H N 394 N H N 395 N H N 396 N H N 397 N H N 398 N N N 399 S C N 400 N C N 401 N O N 402 N C N 403 N C N 404 N C N 405 N O N 406 N H N 407 N H N 408 N H N 409 N H N 410 N H N 411 N H N 412 N H N 413 N H N 414 N H N 415 N H N 416 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N doub N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N doub N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N doub N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N doub N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N doub N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N doub N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N doub N 156 N sing N 157 N sing N 158 N sing N 159 N sing Y 160 N sing Y 161 N doub Y 162 N doub N 163 N sing Y 164 N sing N 165 N sing Y 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N doub N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N doub N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N sing N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N sing N 219 N sing N 220 N doub N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N doub N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N sing N 263 N doub N 264 N sing N 265 N sing N 266 N sing N 267 N sing Y 268 N doub Y 269 N sing Y 270 N sing N 271 N sing Y 272 N doub N 273 N sing Y 274 N doub N 275 N sing Y 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N sing N 284 N sing N 285 N sing N 286 N doub N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N doub N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N doub N 311 N doub N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N doub N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N sing N 327 N sing N 328 N sing N 329 N sing N 330 N sing N 331 N sing N 332 N sing N 333 N sing N 334 N sing N 335 N sing N 336 N doub N 337 N sing N 338 N sing N 339 N sing N 340 N sing Y 341 N doub Y 342 N sing Y 343 N sing N 344 N sing Y 345 N doub Y 346 N sing Y 347 N sing N 348 N sing Y 349 N sing Y 350 N doub N 351 N sing Y 352 N doub N 353 N sing Y 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N doub N 365 N sing N 366 N sing N 367 N sing N 368 N sing Y 369 N doub Y 370 N sing Y 371 N sing N 372 N sing Y 373 N doub N 374 N sing Y 375 N doub N 376 N sing Y 377 N sing N 378 N sing N 379 N sing N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N doub N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N sing N 396 N sing N 397 N sing N 398 N sing N 399 N sing US Biochemistry BICHAW 0033 0006-2960 38 13512 13522 10.1021/bi991362q 10521258 Atomic resolution structures of the core domain of avian sarcoma virus integrase and its D64N mutant. 1999 10.2210/pdb1cz9/pdb pdb_00001cz9 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 95.0 1 IMAGE PLATE 1998-03-21 MARRESEARCH SINGLE WAVELENGTH M x-ray 1 0.98 1.0 X9B NSLS 0.98 SYNCHROTRON NSLS BEAMLINE X9B 17854.455 AVIAN SARCOMA VIRUS INTEGRASE CATALYTIC CORE DOMAIN D64N, INS(P48, L49, R50, E51, N208, L209) 1 man polymer 96.063 SULFATE ION 1 syn non-polymer 192.124 CITRIC ACID 1 syn non-polymer 18.015 water 211 nat water no no PLREGRGLGPLQIWQTNFTLEPRMAPRSWLAVTVDTASSAIVVTQHGRVTSVAAQHHWATAIAVLGRPKAIKTDNGSCFT SKSTREWLARWGIAHTTGIPGNSQGQAMVERANRLLKDKIRVLAEGDGFMKRIPTSKQGELLAKAMYALNHFERGENTKT NL PLREGRGLGPLQIWQTNFTLEPRMAPRSWLAVTVDTASSAIVVTQHGRVTSVAAQHHWATAIAVLGRPKAIKTDNGSCFT SKSTREWLARWGIAHTTGIPGNSQGQAMVERANRLLKDKIRVLAEGDGFMKRIPTSKQGELLAKAMYALNHFERGENTKT NL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Alpharetrovirus Escherichia sample 11876 Avian sarcoma virus 562 Escherichia coli PRC23IN(52-207) 1 2.43 49.37 VAPOR DIFFUSION, HANGING DROP 6.2 20% PEG 4000, 10% ISOPROPANOL, 100 MM CITRATE PH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K 277.0 database_2 struct_ref_seq_dif struct_site chem_comp_atom chem_comp_bond repository Initial release Version format compliance Derived calculations Version format compliance Database references Derived calculations Data collection 1 0 1999-09-08 1 1 2008-04-27 1 2 2011-07-13 1 3 2021-11-03 1 4 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_ref_seq_dif.details _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id SAME PROTEIN AT LOWER RESOLUTION RCSB Y RCSB 1999-09-01 REL REL SO4 SULFATE ION CIT CITRIC ACID HOH water THE APPARENT DISCREPANCY BETWEEN THE SEQUENCE PRESENTED HERE AND THE "POL_RSVP" SEQUENCE IS A RESULT OF VIRAL STRAIN VARIATION. THE STRAIN USED FOR THIS WORK, "ROUS SARCOMA VIRUS SCHMIDT-RUPPIN B", COMPARED TO "POL-RSVP" SEQUENCE DIFFERS AT TWO POSITIONS WITH THE CONSERVATIVE AMINO ACID RESIDUE DIFFERENCES NOTED (VAL->ALA 101 & ARG->LYS 166). SUL 200 2 SO4 SO4 400 A CIT 199 3 CIT CIT 399 A HOH 401 4 HOH HOH 401 A HOH 402 4 HOH HOH 402 A HOH 403 4 HOH HOH 403 A HOH 404 4 HOH HOH 404 A HOH 405 4 HOH HOH 405 A HOH 406 4 HOH HOH 406 A HOH 407 4 HOH HOH 407 A HOH 408 4 HOH HOH 408 A HOH 409 4 HOH HOH 409 A HOH 410 4 HOH HOH 410 A HOH 411 4 HOH HOH 411 A HOH 412 4 HOH HOH 412 A HOH 413 4 HOH HOH 413 A HOH 414 4 HOH HOH 414 A HOH 415 4 HOH HOH 415 A HOH 416 4 HOH HOH 416 A HOH 417 4 HOH HOH 417 A HOH 418 4 HOH HOH 418 A HOH 419 4 HOH HOH 419 A HOH 420 4 HOH HOH 420 A HOH 421 4 HOH HOH 421 A HOH 422 4 HOH HOH 422 A HOH 423 4 HOH HOH 423 A HOH 424 4 HOH HOH 424 A HOH 425 4 HOH HOH 425 A HOH 426 4 HOH HOH 426 A HOH 427 4 HOH HOH 427 A HOH 428 4 HOH HOH 428 A HOH 429 4 HOH HOH 429 A HOH 430 4 HOH HOH 430 A HOH 431 4 HOH HOH 431 A HOH 432 4 HOH HOH 432 A HOH 433 4 HOH HOH 433 A HOH 434 4 HOH HOH 434 A HOH 435 4 HOH HOH 435 A HOH 436 4 HOH HOH 436 A HOH 437 4 HOH HOH 437 A HOH 438 4 HOH HOH 438 A HOH 439 4 HOH HOH 439 A HOH 440 4 HOH HOH 440 A HOH 441 4 HOH HOH 441 A HOH 442 4 HOH HOH 442 A HOH 443 4 HOH HOH 443 A HOH 444 4 HOH HOH 444 A HOH 445 4 HOH HOH 445 A HOH 446 4 HOH HOH 446 A HOH 447 4 HOH HOH 447 A HOH 448 4 HOH HOH 448 A HOH 449 4 HOH HOH 449 A HOH 450 4 HOH HOH 450 A HOH 451 4 HOH HOH 451 A HOH 452 4 HOH HOH 452 A HOH 453 4 HOH HOH 453 A HOH 454 4 HOH HOH 454 A HOH 455 4 HOH HOH 455 A HOH 456 4 HOH HOH 456 A HOH 457 4 HOH HOH 457 A HOH 458 4 HOH HOH 458 A HOH 459 4 HOH HOH 459 A HOH 460 4 HOH HOH 460 A HOH 461 4 HOH HOH 461 A HOH 462 4 HOH HOH 462 A HOH 463 4 HOH HOH 463 A HOH 464 4 HOH HOH 464 A HOH 465 4 HOH HOH 465 A HOH 466 4 HOH HOH 466 A HOH 467 4 HOH HOH 467 A HOH 468 4 HOH HOH 468 A HOH 469 4 HOH HOH 469 A HOH 470 4 HOH HOH 470 A HOH 471 4 HOH HOH 471 A HOH 472 4 HOH HOH 472 A HOH 473 4 HOH HOH 473 A HOH 474 4 HOH HOH 474 A HOH 475 4 HOH HOH 475 A HOH 476 4 HOH HOH 476 A HOH 477 4 HOH HOH 477 A HOH 478 4 HOH HOH 478 A HOH 479 4 HOH HOH 479 A HOH 480 4 HOH HOH 480 A HOH 481 4 HOH HOH 481 A HOH 482 4 HOH HOH 482 A HOH 483 4 HOH HOH 483 A HOH 484 4 HOH HOH 484 A HOH 485 4 HOH HOH 485 A HOH 486 4 HOH HOH 486 A HOH 488 4 HOH HOH 488 A HOH 489 4 HOH HOH 489 A HOH 490 4 HOH HOH 490 A HOH 491 4 HOH HOH 491 A HOH 492 4 HOH HOH 492 A HOH 493 4 HOH HOH 493 A HOH 494 4 HOH HOH 494 A HOH 495 4 HOH HOH 495 A HOH 496 4 HOH HOH 496 A HOH 498 4 HOH HOH 498 A HOH 499 4 HOH HOH 499 A HOH 500 4 HOH HOH 500 A HOH 501 4 HOH HOH 501 A HOH 503 4 HOH HOH 503 A HOH 504 4 HOH HOH 504 A HOH 505 4 HOH HOH 505 A HOH 506 4 HOH HOH 506 A HOH 507 4 HOH HOH 507 A HOH 508 4 HOH HOH 508 A HOH 509 4 HOH HOH 509 A HOH 523 4 HOH HOH 523 A HOH 524 4 HOH HOH 524 A HOH 528 4 HOH HOH 528 A HOH 530 4 HOH HOH 530 A HOH 534 4 HOH HOH 534 A HOH 537 4 HOH HOH 537 A HOH 539 4 HOH HOH 539 A HOH 541 4 HOH HOH 541 A HOH 542 4 HOH HOH 542 A HOH 543 4 HOH HOH 543 A HOH 544 4 HOH HOH 544 A HOH 601 4 HOH HOH 601 A HOH 602 4 HOH HOH 602 A HOH 603 4 HOH HOH 603 A HOH 604 4 HOH HOH 604 A HOH 605 4 HOH HOH 605 A HOH 606 4 HOH HOH 606 A HOH 607 4 HOH HOH 607 A HOH 608 4 HOH HOH 608 A HOH 609 4 HOH HOH 609 A HOH 610 4 HOH HOH 610 A HOH 611 4 HOH HOH 611 A HOH 612 4 HOH HOH 612 A HOH 613 4 HOH HOH 613 A HOH 614 4 HOH HOH 614 A HOH 615 4 HOH HOH 615 A HOH 616 4 HOH HOH 616 A HOH 617 4 HOH HOH 617 A HOH 618 4 HOH HOH 618 A HOH 619 4 HOH HOH 619 A HOH 620 4 HOH HOH 620 A HOH 621 4 HOH HOH 621 A HOH 622 4 HOH HOH 622 A HOH 623 4 HOH HOH 623 A HOH 624 4 HOH HOH 624 A HOH 625 4 HOH HOH 625 A HOH 626 4 HOH HOH 626 A HOH 627 4 HOH HOH 627 A HOH 628 4 HOH HOH 628 A HOH 629 4 HOH HOH 629 A HOH 630 4 HOH HOH 630 A HOH 631 4 HOH HOH 631 A HOH 632 4 HOH HOH 632 A HOH 633 4 HOH HOH 633 A HOH 634 4 HOH HOH 634 A HOH 635 4 HOH HOH 635 A HOH 636 4 HOH HOH 636 A HOH 637 4 HOH HOH 637 A HOH 638 4 HOH HOH 638 A HOH 639 4 HOH HOH 639 A HOH 640 4 HOH HOH 640 A HOH 641 4 HOH HOH 641 A HOH 642 4 HOH HOH 642 A HOH 643 4 HOH HOH 643 A HOH 644 4 HOH HOH 644 A HOH 645 4 HOH HOH 645 A HOH 646 4 HOH HOH 646 A HOH 647 4 HOH HOH 647 A HOH 648 4 HOH HOH 648 A HOH 649 4 HOH HOH 649 A HOH 650 4 HOH HOH 650 A HOH 651 4 HOH HOH 651 A HOH 652 4 HOH HOH 652 A HOH 653 4 HOH HOH 653 A HOH 654 4 HOH HOH 654 A HOH 655 4 HOH HOH 655 A HOH 656 4 HOH HOH 656 A HOH 657 4 HOH HOH 657 A HOH 658 4 HOH HOH 658 A HOH 659 4 HOH HOH 659 A HOH 660 4 HOH HOH 660 A HOH 661 4 HOH HOH 661 A HOH 662 4 HOH HOH 662 A HOH 663 4 HOH HOH 663 A HOH 664 4 HOH HOH 664 A HOH 665 4 HOH HOH 665 A HOH 666 4 HOH HOH 666 A HOH 667 4 HOH HOH 667 A HOH 668 4 HOH HOH 668 A HOH 669 4 HOH HOH 669 A HOH 670 4 HOH HOH 670 A HOH 671 4 HOH HOH 671 A HOH 672 4 HOH HOH 672 A HOH 673 4 HOH HOH 673 A HOH 674 4 HOH HOH 674 A HOH 675 4 HOH HOH 675 A HOH 676 4 HOH HOH 676 A HOH 677 4 HOH HOH 677 A HOH 678 4 HOH HOH 678 A HOH 679 4 HOH HOH 679 A HOH 680 4 HOH HOH 680 A HOH 681 4 HOH HOH 681 A HOH 682 4 HOH HOH 682 A HOH 683 4 HOH HOH 683 A HOH 684 4 HOH HOH 684 A HOH 685 4 HOH HOH 685 A HOH 686 4 HOH HOH 686 A HOH 687 4 HOH HOH 687 A HOH 688 4 HOH HOH 688 A HOH 689 4 HOH HOH 689 A HOH 690 4 HOH HOH 690 A HOH 691 4 HOH HOH 691 A HOH 692 4 HOH HOH 692 A HOH 693 4 HOH HOH 693 A HOH 694 4 HOH HOH 694 A n 1 48 A n 2 49 A n 3 50 A n 4 51 A n 5 52 A n 6 53 A n 7 54 A n 8 55 A n 9 56 A n 10 57 A n 11 58 A GLN 59 n 12 GLN 59 A ILE 60 n 13 ILE 60 A TRP 61 n 14 TRP 61 A GLN 62 n 15 GLN 62 A THR 63 n 16 THR 63 A ASN 64 n 17 ASN 64 A PHE 65 n 18 PHE 65 A THR 66 n 19 THR 66 A LEU 67 n 20 LEU 67 A GLU 68 n 21 GLU 68 A PRO 69 n 22 PRO 69 A ARG 70 n 23 ARG 70 A MET 71 n 24 MET 71 A ALA 72 n 25 ALA 72 A PRO 73 n 26 PRO 73 A ARG 74 n 27 ARG 74 A SER 75 n 28 SER 75 A TRP 76 n 29 TRP 76 A LEU 77 n 30 LEU 77 A ALA 78 n 31 ALA 78 A VAL 79 n 32 VAL 79 A THR 80 n 33 THR 80 A VAL 81 n 34 VAL 81 A ASP 82 n 35 ASP 82 A THR 83 n 36 THR 83 A ALA 84 n 37 ALA 84 A SER 85 n 38 SER 85 A SER 86 n 39 SER 86 A ALA 87 n 40 ALA 87 A ILE 88 n 41 ILE 88 A VAL 89 n 42 VAL 89 A VAL 90 n 43 VAL 90 A THR 91 n 44 THR 91 A GLN 92 n 45 GLN 92 A HIS 93 n 46 HIS 93 A GLY 94 n 47 GLY 94 A ARG 95 n 48 ARG 95 A VAL 96 n 49 VAL 96 A THR 97 n 50 THR 97 A SER 98 n 51 SER 98 A VAL 99 n 52 VAL 99 A ALA 100 n 53 ALA 100 A ALA 101 n 54 ALA 101 A GLN 102 n 55 GLN 102 A HIS 103 n 56 HIS 103 A HIS 104 n 57 HIS 104 A TRP 105 n 58 TRP 105 A ALA 106 n 59 ALA 106 A THR 107 n 60 THR 107 A ALA 108 n 61 ALA 108 A ILE 109 n 62 ILE 109 A ALA 110 n 63 ALA 110 A VAL 111 n 64 VAL 111 A LEU 112 n 65 LEU 112 A GLY 113 n 66 GLY 113 A ARG 114 n 67 ARG 114 A PRO 115 n 68 PRO 115 A LYS 116 n 69 LYS 116 A ALA 117 n 70 ALA 117 A ILE 118 n 71 ILE 118 A LYS 119 n 72 LYS 119 A THR 120 n 73 THR 120 A ASP 121 n 74 ASP 121 A ASN 122 n 75 ASN 122 A GLY 123 n 76 GLY 123 A SER 124 n 77 SER 124 A CYS 125 n 78 CYS 125 A PHE 126 n 79 PHE 126 A THR 127 n 80 THR 127 A SER 128 n 81 SER 128 A LYS 129 n 82 LYS 129 A SER 130 n 83 SER 130 A THR 131 n 84 THR 131 A ARG 132 n 85 ARG 132 A GLU 133 n 86 GLU 133 A TRP 134 n 87 TRP 134 A LEU 135 n 88 LEU 135 A ALA 136 n 89 ALA 136 A ARG 137 n 90 ARG 137 A TRP 138 n 91 TRP 138 A GLY 139 n 92 GLY 139 A ILE 140 n 93 ILE 140 A ALA 141 n 94 ALA 141 A HIS 142 n 95 HIS 142 A THR 143 n 96 THR 143 A THR 144 n 97 THR 144 A GLY 145 n 98 GLY 145 A ILE 146 n 99 ILE 146 A PRO 147 n 100 PRO 147 A GLY 148 n 101 GLY 148 A ASN 149 n 102 ASN 149 A SER 150 n 103 SER 150 A GLN 151 n 104 GLN 151 A GLY 152 n 105 GLY 152 A GLN 153 n 106 GLN 153 A ALA 154 n 107 ALA 154 A MET 155 n 108 MET 155 A VAL 156 n 109 VAL 156 A GLU 157 n 110 GLU 157 A ARG 158 n 111 ARG 158 A ALA 159 n 112 ALA 159 A ASN 160 n 113 ASN 160 A ARG 161 n 114 ARG 161 A LEU 162 n 115 LEU 162 A LEU 163 n 116 LEU 163 A LYS 164 n 117 LYS 164 A ASP 165 n 118 ASP 165 A LYS 166 n 119 LYS 166 A ILE 167 n 120 ILE 167 A ARG 168 n 121 ARG 168 A VAL 169 n 122 VAL 169 A LEU 170 n 123 LEU 170 A ALA 171 n 124 ALA 171 A GLU 172 n 125 GLU 172 A GLY 173 n 126 GLY 173 A ASP 174 n 127 ASP 174 A GLY 175 n 128 GLY 175 A PHE 176 n 129 PHE 176 A MET 177 n 130 MET 177 A LYS 178 n 131 LYS 178 A ARG 179 n 132 ARG 179 A ILE 180 n 133 ILE 180 A PRO 181 n 134 PRO 181 A THR 182 n 135 THR 182 A SER 183 n 136 SER 183 A LYS 184 n 137 LYS 184 A GLN 185 n 138 GLN 185 A GLY 186 n 139 GLY 186 A GLU 187 n 140 GLU 187 A LEU 188 n 141 LEU 188 A LEU 189 n 142 LEU 189 A ALA 190 n 143 ALA 190 A LYS 191 n 144 LYS 191 A ALA 192 n 145 ALA 192 A MET 193 n 146 MET 193 A TYR 194 n 147 TYR 194 A ALA 195 n 148 ALA 195 A LEU 196 n 149 LEU 196 A ASN 197 n 150 ASN 197 A n 151 198 A n 152 199 A n 153 200 A n 154 201 A n 155 202 A n 156 203 A n 157 204 A n 158 205 A n 159 206 A n 160 207 A n 161 208 A n 162 209 A 0.1280000 0.1460000 4174 author_and_software_defined_assembly PISA,PQS 2 dimeric 2410 -56 13190 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 7_556 y,x,-z+1 crystal symmetry operation 0.0000000000 0.0000000000 78.3600000000 A O HIS 93 A O HIS 46 A N TRP 76 A N TRP 29 A N VAL 81 A N VAL 34 A O GLN 62 A O GLN 15 A N TRP 61 A N TRP 14 A O ALA 117 A O ALA 70 A N ILE 118 A N ILE 71 A O ALA 141 A O ALA 94 1 A HOH 680 D HOH 1 A HOH 694 D HOH 1 A CG GLN 151 A CG GLN 104 0 Y 1 A CD GLN 151 A CD GLN 104 0 Y 1 A OE1 GLN 151 A OE1 GLN 104 0 Y 1 A NE2 GLN 151 A NE2 GLN 104 0 Y 1 A PRO 48 A PRO 1 1 Y 1 A LEU 49 A LEU 2 1 Y 1 A ARG 50 A ARG 3 1 Y 1 A GLU 51 A GLU 4 1 Y 1 A GLY 52 A GLY 5 1 Y 1 A ARG 53 A ARG 6 1 Y 1 A GLY 54 A GLY 7 1 Y 1 A LEU 55 A LEU 8 1 Y 1 A GLY 56 A GLY 9 1 Y 1 A PRO 57 A PRO 10 1 Y 1 A LEU 58 A LEU 11 1 Y 1 A HIS 198 A HIS 151 1 Y 1 A PHE 199 A PHE 152 1 Y 1 A GLU 200 A GLU 153 1 Y 1 A ARG 201 A ARG 154 1 Y 1 A GLY 202 A GLY 155 1 Y 1 A GLU 203 A GLU 156 1 Y 1 A ASN 204 A ASN 157 1 Y 1 A THR 205 A THR 158 1 Y 1 A LYS 206 A LYS 159 1 Y 1 A THR 207 A THR 160 1 Y 1 A ASN 208 A ASN 161 1 Y 1 A LEU 209 A LEU 162 1 Y 1 A ARG 74 0.094 SIDE CHAIN 1 A ARG 114 0.169 SIDE CHAIN 1 3.03 0.50 120.30 123.33 A A A NE CZ NH1 ARG ARG ARG 70 70 70 A A A N 1 4.06 0.50 120.30 124.36 A A A NE CZ NH1 ARG ARG ARG 70 70 70 B B B N 1 -5.98 0.50 120.30 114.32 A A A NE CZ NH1 ARG ARG ARG 74 74 74 A A A N 1 -9.60 0.50 120.30 110.70 A A A NE CZ NH1 ARG ARG ARG 74 74 74 B B B N 1 6.22 0.50 120.30 126.52 A A A NE CZ NH2 ARG ARG ARG 74 74 74 B B B N 1 15.50 1.40 123.60 139.10 A A A CD NE CZ ARG ARG ARG 114 114 114 B B B N 1 -7.31 1.10 119.40 112.09 A A A NH1 CZ NH2 ARG ARG ARG 114 114 114 B B B N 1 5.30 0.50 120.30 125.60 A A A NE CZ NH1 ARG ARG ARG 114 114 114 A A A N 1 9.38 0.50 120.30 129.68 A A A NE CZ NH1 ARG ARG ARG 114 114 114 B B B N 1 -5.73 0.50 120.30 114.57 A A A NE CZ NH2 ARG ARG ARG 114 114 114 B B B N 1 -15.86 2.20 113.40 97.54 A A A CA CB CG LYS LYS LYS 119 119 119 B N 1 10.36 1.40 123.60 133.96 A A A CD NE CZ ARG ARG ARG 137 137 137 N 1 9.53 1.10 119.40 128.93 A A A NH1 CZ NH2 ARG ARG ARG 137 137 137 N 1 -5.87 0.50 120.30 114.43 A A A NE CZ NH1 ARG ARG ARG 137 137 137 N 1 -3.67 0.50 120.30 116.63 A A A NE CZ NH2 ARG ARG ARG 137 137 137 N 1 -3.20 0.50 120.30 117.10 A A A NE CZ NH2 ARG ARG ARG 161 161 161 N 1 35.30 3.00 111.90 147.20 A A A CG CD CE LYS LYS LYS 166 166 166 B N 1 13.20 1.70 113.30 126.50 A A A CA CB CG MET MET MET 177 177 177 B N 1 A A CG CD ARG ARG 70 70 0.182 0.025 1.515 1.697 B N 1 A A CB CG LYS LYS 119 119 0.582 0.027 1.521 2.103 B N 1 A A CD CE LYS LYS 166 166 -0.165 0.025 1.508 1.343 B N 1 A LYS 178 -131.61 -121.67 0.1500000 0.1470000 0.1460000 0.1460000 1.20 10.00 1209 1077 53856 53856 1445 97.1 RANDOM 1 0.0 AB INITIO ENGH AND HUBER 1 939. 1218. 1.20 10.00 211 1301 18 0 1072 0.020 0.029 0.020 0.343 0.074 0.084 0.005 0.049 0.081 18.4 1.20 20.0 1CZ9 53915 53856 -3 0.0600000 1 28.4 6.4 97.1 1.20 1.22 1 4.2 90.4 model building X-PLOR refinement SHELXL-97 data reduction DENZO data scaling SCALEPACK phasing X-PLOR ATOMIC RESOLUTION ASV INTEGRASE CORE DOMAIN (D64N) FROM CITRATE 1 N N 2 N N 3 N N 4 N N A PRO 69 A PRO 22 HELX_P A ALA 72 A ALA 25 5 1 4 A THR 97 A THR 50 HELX_P A GLY 113 A GLY 66 1 2 17 A GLY 123 A GLY 76 HELX_P A SER 128 A SER 81 1 3 6 A SER 128 A SER 81 HELX_P A GLY 139 A GLY 92 1 4 12 A ASN 149 A ASN 102 HELX_P A ASP 174 A ASP 127 1 5 26 A PRO 181 A PRO 134 HELX_P A SER 183 A SER 136 5 6 3 A LYS 184 A LYS 137 HELX_P A ASN 197 A ASN 150 1 7 14 TRANSFERASE MIXED BETA-SHEET SURROUNDED BY ALPHA-HELICES, TRANSFERASE A ALA 72 A ALA 25 1 A PRO 73 A PRO 26 5.57 POL_RSVP UNP 1 P03354 624 779 1CZ9 52 207 P03354 A 1 5 160 1 insertion PRO 48 1CZ9 A P03354 UNP 1 1 insertion LEU 49 1CZ9 A P03354 UNP 2 1 insertion ARG 50 1CZ9 A P03354 UNP 3 1 insertion GLU 51 1CZ9 A P03354 UNP 4 1 PRO conflict GLY 52 1CZ9 A P03354 UNP 624 5 1 ASP engineered mutation ASN 64 1CZ9 A P03354 UNP 636 17 1 VAL SEE REMARK 999 ALA 101 1CZ9 A P03354 UNP 673 54 1 ARG SEE REMARK 999 LYS 166 1CZ9 A P03354 UNP 738 119 1 insertion ASN 208 1CZ9 A P03354 UNP 161 1 insertion LEU 209 1CZ9 A P03354 UNP 162 5 anti-parallel anti-parallel parallel parallel A ILE 88 A ILE 41 A HIS 93 A HIS 46 A TRP 76 A TRP 29 A ASP 82 A ASP 35 A ILE 60 A ILE 13 A LEU 67 A LEU 20 A ALA 117 A ALA 70 A ASP 121 A ASP 74 A ALA 141 A ALA 94 A GLY 145 A GLY 98 BINDING SITE FOR RESIDUE SO4 A 400 A SO4 400 Software 6 BINDING SITE FOR RESIDUE CIT A 399 A CIT 399 Software 9 A VAL 90 A VAL 43 6 1_555 A MET 193 A MET 146 6 1_555 A HOH 466 D HOH 6 1_555 A HOH 611 D HOH 6 1_555 A HOH 694 D HOH 6 7_556 A HOH 694 D HOH 6 1_555 A ARG 132 A ARG 85 9 6_566 A ALA 136 A ALA 89 9 6_566 A ARG 179 A ARG 132 9 1_555 A PRO 181 A PRO 134 9 1_555 A THR 182 A THR 135 9 1_555 A SER 183 A SER 136 9 1_555 A HOH 604 D HOH 9 1_555 A HOH 621 D HOH 9 1_555 A HOH 637 D HOH 9 1_555 96 P 43 21 2