12.12
9.440
20.132
22.675
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1
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1
1
1.00
1
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10.76
9.720
21.116
23.675
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1
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1
1
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1
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9.53
11.150
21.085
24.061
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1
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A
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1
1
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1
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9.66
11.340
19.873
24.840
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1
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1
1
1.00
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O
10.04
12.190
21.008
22.913
A
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1
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1
1
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1
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10.58
13.259
21.810
23.271
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1
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1
1
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8.74
12.528
19.480
22.818
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1
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1
1
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8.33
12.404
19.106
24.351
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1
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1
1
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7.67
11.965
17.670
24.482
A
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1
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A
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1
1
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1
N
7.34
12.971
16.738
24.597
A
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1
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A
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1
1
1.00
1
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7.47
14.164
17.046
24.643
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1
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1
1
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O
6.75
12.562
15.444
24.648
A
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1
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N3
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1
1
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1
N
7.31
11.255
15.048
24.595
A
C4
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1
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A
C4
DC
1
1
1.00
1
C
7.42
10.942
13.740
24.676
A
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1
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A
N4
DC
1
1
1.00
1
N
7.51
10.272
16.035
24.494
A
C5
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1
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A
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1
1
1.00
1
C
7.00
10.635
17.312
24.400
A
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1
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A
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DC
1
1
1.00
1
C
12.52
13.880
22.870
22.278
A
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2
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DG
1
2
1.00
1
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13.25
14.888
23.540
23.097
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2
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1
2
1.00
1
O
13.17
12.831
23.541
21.577
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2
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1
2
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10.54
14.596
22.049
21.045
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2
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1
2
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10.53
15.761
21.321
21.416
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2
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1
2
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10.18
16.207
20.562
20.184
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2
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1
2
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9.89
15.334
19.461
20.016
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2
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1
2
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O
10.99
16.012
21.303
18.863
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2
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1
2
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13.67
17.087
20.916
18.030
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2
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1
2
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O
10.28
14.670
20.896
18.283
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2
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1
2
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9.10
14.839
19.366
18.682
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2
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1
2
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1
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8.20
13.683
18.584
18.550
A
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2
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1
2
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1
N
8.58
12.374
18.900
18.546
A
C8
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2
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A
C8
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1
2
1.00
1
C
8.74
11.520
17.881
18.381
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N7
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2
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A
N7
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1
2
1.00
1
N
7.23
12.389
16.828
18.273
A
C5
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2
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1
2
1.00
1
C
6.86
12.142
15.462
18.107
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2
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1
2
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1
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7.28
11.052
14.873
17.974
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2
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1
2
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1
O
6.12
13.200
14.668
18.092
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2
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1
2
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1
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5.98
14.451
15.135
18.177
A
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2
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1
2
1.00
1
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6.57
15.429
14.325
18.158
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2
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1
2
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6.67
14.789
16.427
18.348
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2
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1
2
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N
6.86
13.683
17.206
18.389
A
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2
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A
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1
2
1.00
1
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15.32
17.806
21.771
16.865
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3
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1
3
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14.75
18.484
22.726
17.684
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3
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1
3
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O
15.70
16.818
22.084
15.804
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3
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1
3
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13.81
19.013
20.806
16.324
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3
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3
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12.21
19.855
20.230
17.303
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3
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1
3
1.00
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10.22
19.971
18.810
16.684
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3
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1
3
1.00
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10.05
18.709
18.141
16.867
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3
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1
3
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10.36
20.364
18.676
15.184
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3
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1
3
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10.92
21.602
18.007
15.238
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3
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1
3
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O
10.18
19.425
17.706
14.623
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3
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1
3
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1
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9.28
18.615
17.122
15.800
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3
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A
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1
3
1.00
1
C
8.13
17.146
17.027
15.539
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3
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1
3
1.00
1
N
7.67
16.658
15.745
15.406
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3
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1
3
1.00
1
C
7.80
17.358
14.737
15.482
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3
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A
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1
3
1.00
1
O
7.04
15.320
15.613
15.140
A
N3
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3
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A
N3
DT
1
3
1.00
1
N
7.03
14.416
16.658
15.034
A
C4
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3
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A
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1
3
1.00
1
C
7.66
13.221
16.437
14.806
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3
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1
3
1.00
1
O
7.79
14.972
17.986
15.119
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3
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A
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1
3
1.00
1
C
8.45
14.039
19.163
14.997
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3
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A
C7
DT
1
3
1.00
1
C
8.24
16.277
18.103
15.403
A
C6
DT
3
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A
C6
DT
1
3
1.00
1
C
12.41
22.483
17.776
13.915
A
P
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4
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A
P
DA
1
4
1.00
1
P
12.92
23.749
17.432
14.467
A
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4
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A
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DA
1
4
1.00
1
O
11.81
22.142
18.763
12.999
A
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4
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A
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1
4
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1
O
10.57
21.872
16.403
13.246
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4
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1
4
1.00
1
O
10.39
22.331
15.221
13.801
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4
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A
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1
4
1.00
1
C
9.50
21.707
14.048
13.026
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4
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A
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1
4
1.00
1
C
9.31
20.295
14.095
13.060
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4
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A
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1
4
1.00
1
O
9.92
22.152
14.206
11.541
A
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4
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A
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1
4
1.00
1
C
11.83
22.611
12.909
11.227
A
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4
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A
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1
4
1.00
1
O
8.37
20.958
14.716
10.777
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4
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A
C2'
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1
4
1.00
1
C
8.47
19.871
14.063
11.660
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4
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A
C1'
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1
4
1.00
1
C
7.84
18.666
14.793
11.676
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N9
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4
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A
N9
DA
1
4
1.00
1
N
7.30
18.471
16.108
11.738
A
C8
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4
ATOM
A
C8
DA
1
4
1.00
1
C
7.45
17.199
16.422
11.749
A
N7
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4
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A
N7
DA
1
4
1.00
1
N
6.73
16.523
15.226
11.662
A
C5
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4
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A
C5
DA
1
4
1.00
1
C
6.79
15.126
14.930
11.606
A
C6
DA
4
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A
C6
DA
1
4
1.00
1
C
7.69
14.119
15.860
11.622
A
N6
DA
4
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A
N6
DA
1
4
1.00
1
N
6.67
14.785
13.639
11.546
A
N1
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4
ATOM
A
N1
DA
1
4
1.00
1
N
7.47
15.784
12.746
11.548
A
C2
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4
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A
C2
DA
1
4
1.00
1
C
7.39
17.114
12.892
11.548
A
N3
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4
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A
N3
DA
1
4
1.00
1
N
7.44
17.381
14.196
11.634
A
C4
DA
4
ATOM
A
C4
DA
1
4
1.00
1
C
13.31
23.416
12.662
9.852
A
P
DC
5
ATOM
A
P
DC
1
5
1.00
1
P
14.20
24.067
11.421
10.085
A
OP1
DC
5
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A
OP1
DC
1
5
1.00
1
O
13.78
23.991
13.889
9.359
A
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5
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A
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DC
1
5
1.00
1
O
13.26
22.247
12.267
8.726
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5
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A
O5'
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1
5
1.00
1
O
11.64
21.493
11.053
9.022
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5
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A
C5'
DC
1
5
1.00
1
C
11.58
20.380
11.041
7.927
A
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5
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A
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1
5
1.00
1
C
10.83
19.352
11.934
8.461
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5
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A
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1
5
1.00
1
O
10.95
20.775
11.678
6.555
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5
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A
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1
5
1.00
1
C
12.05
20.138
10.880
5.598
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5
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A
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1
5
1.00
1
O
10.04
20.135
13.045
6.530
A
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5
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A
C2'
DC
1
5
1.00
1
C
9.12
18.897
12.664
7.453
A
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5
ATOM
A
C1'
DC
1
5
1.00
1
C
8.38
18.212
13.947
7.856
A
N1
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5
ATOM
A
N1
DC
1
5
1.00
1
N
7.67
16.868
13.757
8.102
A
C2
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5
ATOM
A
C2
DC
1
5
1.00
1
C
8.22
16.298
12.673
8.112
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O2
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5
ATOM
A
O2
DC
1
5
1.00
1
O
7.20
16.118
14.856
8.316
A
N3
DC
5
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A
N3
DC
1
5
1.00
1
N
7.70
16.679
16.135
8.368
A
C4
DC
5
ATOM
A
C4
DC
1
5
1.00
1
C
7.47
15.807
17.168
8.572
A
N4
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5
ATOM
A
N4
DC
1
5
1.00
1
N
7.96
18.092
16.300
8.177
A
C5
DC
5
ATOM
A
C5
DC
1
5
1.00
1
C
7.97
18.818
15.190
7.885
A
C6
DC
5
ATOM
A
C6
DC
1
5
1.00
1
C
12.69
20.925
9.806
4.711
A
P
DG
6
ATOM
A
P
DG
1
6
1.00
1
P
14.08
21.503
8.832
5.579
A
OP1
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6
ATOM
A
OP1
DG
1
6
1.00
1
O
12.55
21.697
10.705
3.844
A
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6
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A
OP2
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1
6
1.00
1
O
11.03
19.779
8.965
3.920
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6
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DG
1
6
1.00
1
O
9.58
18.892
8.112
4.572
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6
ATOM
A
C5'
DG
1
6
1.00
1
C
9.00
17.841
7.586
3.565
A
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6
ATOM
A
C4'
DG
1
6
1.00
1
C
8.21
16.963
8.607
3.147
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6
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A
O4'
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1
6
1.00
1
O
8.30
18.512
7.083
2.249
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6
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A
C3'
DG
1
6
1.00
1
C
9.62
17.738
5.997
1.874
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6
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A
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1
6
1.00
1
O
7.57
18.507
8.258
1.357
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6
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C2'
DG
1
6
1.00
1
C
6.91
17.190
8.992
1.746
A
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6
ATOM
A
C1'
DG
1
6
1.00
1
C
6.34
17.266
10.421
1.724
A
N9
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6
ATOM
A
N9
DG
1
6
1.00
1
N
6.57
18.319
11.236
1.772
A
C8
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6
ATOM
A
C8
DG
1
6
1.00
1
C
7.17
18.029
12.501
1.703
A
N7
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6
ATOM
A
N7
DG
1
6
1.00
1
N
6.49
16.646
12.455
1.621
A
C5
DG
6
ATOM
A
C5
DG
1
6
1.00
1
C
6.45
15.705
13.539
1.554
A
C6
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6
ATOM
A
C6
DG
1
6
1.00
1
C
6.92
16.036
14.768
1.573
A
O6
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6
ATOM
A
O6
DG
1
6
1.00
1
O
6.52
14.405
13.178
1.520
A
N1
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6
ATOM
A
N1
DG
1
6
1.00
1
N
6.18
14.015
11.885
1.525
A
C2
DG
6
ATOM
A
C2
DG
1
6
1.00
1
C
6.39
12.796
11.577
1.462
A
N2
DG
6
ATOM
A
N2
DG
1
6
1.00
1
N
5.96
14.846
10.811
1.559
A
N3
DG
6
ATOM
A
N3
DG
1
6
1.00
1
N
5.99
16.108
11.223
1.620
A
C4
DG
6
ATOM
A
C4
DG
1
6
1.00
1
C
9.66
15.076
18.210
5.093
A
C1
DM1
7
HETATM
B
C1
DM1
2
1.00
1
C
10.52
16.284
18.936
5.143
A
C2
DM1
7
HETATM
B
C2
DM1
2
1.00
1
C
10.79
17.527
18.293
5.081
A
C3
DM1
7
HETATM
B
C3
DM1
2
1.00
1
C
9.04
17.520
16.910
5.002
A
C4
DM1
7
HETATM
B
C4
DM1
2
1.00
1
C
10.59
18.754
16.294
4.969
A
O4
DM1
7
HETATM
B
O4
DM1
2
1.00
1
O
7.88
16.334
16.176
4.980
A
C5
DM1
7
HETATM
B
C5
DM1
2
1.00
1
C
7.15
16.306
14.768
4.911
A
C6
DM1
7
HETATM
B
C6
DM1
2
1.00
1
C
7.70
17.462
14.041
4.823
A
O6
DM1
7
HETATM
B
O6
DM1
2
1.00
1
O
6.38
15.089
14.049
4.912
A
C7
DM1
7
HETATM
B
C7
DM1
2
1.00
1
C
6.09
15.065
12.635
4.850
A
C8
DM1
7
HETATM
B
C8
DM1
2
1.00
1
C
6.51
16.272
11.915
4.864
A
O8
DM1
7
HETATM
B
O8
DM1
2
1.00
1
O
6.04
13.847
11.929
4.810
A
C9
DM1
7
HETATM
B
C9
DM1
2
1.00
1
C
7.37
13.931
10.456
4.819
A
C10
DM1
7
HETATM
B
C10
DM1
2
1.00
1
C
9.19
14.546
10.208
6.171
A
O10
DM1
7
HETATM
B
O10
DM1
2
1.00
1
O
7.99
12.603
9.711
4.699
A
C11
DM1
7
HETATM
B
C11
DM1
2
1.00
1
C
7.93
11.442
10.539
5.370
A
C12
DM1
7
HETATM
B
C12
DM1
2
1.00
1
C
7.15
11.531
10.603
6.805
A
O12
DM1
7
HETATM
B
O12
DM1
2
1.00
1
O
9.30
10.153
9.725
5.149
A
C13
DM1
7
HETATM
B
C13
DM1
2
1.00
1
C
10.77
9.415
10.008
4.095
A
O13
DM1
7
HETATM
B
O13
DM1
2
1.00
1
O
9.75
9.798
8.587
6.083
A
C14
DM1
7
HETATM
B
C14
DM1
2
1.00
1
C
6.34
11.346
11.979
4.813
A
C15
DM1
7
HETATM
B
C15
DM1
2
1.00
1
C
5.56
12.679
12.633
4.852
A
C16
DM1
7
HETATM
B
C16
DM1
2
1.00
1
C
5.40
12.674
14.045
4.878
A
C17
DM1
7
HETATM
B
C17
DM1
2
1.00
1
C
6.12
11.428
14.623
4.847
A
O17
DM1
7
HETATM
B
O17
DM1
2
1.00
1
O
5.99
13.866
14.761
4.931
A
C18
DM1
7
HETATM
B
C18
DM1
2
1.00
1
C
6.99
13.865
16.186
4.984
A
C19
DM1
7
HETATM
B
C19
DM1
2
1.00
1
C
8.12
12.738
16.887
5.004
A
O19
DM1
7
HETATM
B
O19
DM1
2
1.00
1
O
7.72
15.112
16.834
4.999
A
C20
DM1
7
HETATM
B
C20
DM1
2
1.00
1
C
11.44
19.976
17.161
5.150
A
C21
DM1
7
HETATM
B
C21
DM1
2
1.00
1
C
10.36
15.484
9.139
6.380
A
C1'
DM1
7
HETATM
B
C1'
DM1
2
1.00
1
C
10.90
16.539
9.605
7.374
A
C2'
DM1
7
HETATM
B
C2'
DM1
2
1.00
1
C
12.13
15.948
9.604
8.804
A
C3'
DM1
7
HETATM
B
C3'
DM1
2
1.00
1
C
12.08
16.975
9.929
9.802
A
N3'
DM1
7
HETATM
B
N3'
DM1
2
1.00
1
N
12.84
15.066
8.368
9.128
A
C4'
DM1
7
HETATM
B
C4'
DM1
2
1.00
1
C
13.97
16.035
7.236
9.128
A
O4'
DM1
7
HETATM
B
O4'
DM1
2
1.00
1
O
12.67
14.045
8.040
7.988
A
C5'
DM1
7
HETATM
B
C5'
DM1
2
1.00
1
C
11.52
14.723
7.953
6.669
A
O5'
DM1
7
HETATM
B
O5'
DM1
2
1.00
1
O
12.90
13.253
6.745
8.148
A
C6'
DM1
7
HETATM
B
C6'
DM1
2
1.00
1
C
27.76
13.338
8.211
23.685
A
NA
NA
8
HETATM
C
NA
NA
3
1.00
1
NA
24.77
14.991
5.940
22.985
A
O
HOH
9
HETATM
D
O
HOH
4
1.00
1
O
21.63
11.335
10.010
25.106
A
O
HOH
10
HETATM
D
O
HOH
4
1.00
1
O
46.45
11.438
6.867
25.092
A
O
HOH
11
HETATM
D
O
HOH
4
1.00
1
O
15.35
16.070
18.990
24.456
A
O
HOH
12
HETATM
D
O
HOH
4
1.00
1
O
18.38
22.603
17.657
19.015
A
O
HOH
13
HETATM
D
O
HOH
4
1.00
1
O
19.20
19.741
14.106
24.572
A
O
HOH
14
HETATM
D
O
HOH
4
1.00
1
O
19.63
24.403
16.903
16.976
A
O
HOH
15
HETATM
D
O
HOH
4
1.00
1
O
19.95
17.177
21.055
13.251
A
O
HOH
16
HETATM
D
O
HOH
4
1.00
1
O
21.53
11.642
22.158
19.073
A
O
HOH
17
HETATM
D
O
HOH
4
1.00
1
O
22.42
8.667
11.599
14.529
A
O
HOH
18
HETATM
D
O
HOH
4
1.00
1
O
22.59
8.151
10.994
17.573
A
O
HOH
19
HETATM
D
O
HOH
4
1.00
1
O
23.39
18.389
11.542
13.988
A
O
HOH
20
HETATM
D
O
HOH
4
1.00
1
O
23.54
19.180
8.246
10.144
A
O
HOH
21
HETATM
D
O
HOH
4
1.00
1
O
24.22
9.505
7.314
15.450
A
O
HOH
22
HETATM
D
O
HOH
4
1.00
1
O
25.18
10.699
17.442
14.626
A
O
HOH
23
HETATM
D
O
HOH
4
1.00
1
O
25.81
12.439
5.653
18.684
A
O
HOH
24
HETATM
D
O
HOH
4
1.00
1
O
26.23
7.859
3.159
20.047
A
O
HOH
25
HETATM
D
O
HOH
4
1.00
1
O
26.64
11.574
2.203
13.138
A
O
HOH
26
HETATM
D
O
HOH
4
1.00
1
O
27.36
8.950
21.228
20.226
A
O
HOH
27
HETATM
D
O
HOH
4
1.00
1
O
28.16
8.056
13.457
24.530
A
O
HOH
28
HETATM
D
O
HOH
4
1.00
1
O
28.19
6.640
6.981
21.129
A
O
HOH
29
HETATM
D
O
HOH
4
1.00
1
O
28.97
10.158
6.039
17.950
A
O
HOH
30
HETATM
D
O
HOH
4
1.00
1
O
29.67
19.053
22.396
19.925
A
O
HOH
31
HETATM
D
O
HOH
4
1.00
1
O
29.95
7.297
18.275
23.738
A
O
HOH
32
HETATM
D
O
HOH
4
1.00
1
O
30.96
18.967
16.512
25.535
A
O
HOH
33
HETATM
D
O
HOH
4
1.00
1
O
31.79
12.754
4.753
21.326
A
O
HOH
34
HETATM
D
O
HOH
4
1.00
1
O
31.96
23.334
12.355
15.613
A
O
HOH
35
HETATM
D
O
HOH
4
1.00
1
O
32.90
15.414
25.326
18.394
A
O
HOH
36
HETATM
D
O
HOH
4
1.00
1
O
33.12
8.639
16.551
20.859
A
O
HOH
37
HETATM
D
O
HOH
4
1.00
1
O
34.43
6.156
18.027
27.470
A
O
HOH
38
HETATM
D
O
HOH
4
1.00
1
O
35.43
21.581
13.790
21.904
A
O
HOH
39
HETATM
D
O
HOH
4
1.00
1
O
35.56
8.968
15.396
15.472
A
O
HOH
40
HETATM
D
O
HOH
4
1.00
1
O
35.95
13.716
23.018
15.466
A
O
HOH
41
HETATM
D
O
HOH
4
1.00
1
O
37.46
7.301
20.135
18.938
A
O
HOH
42
HETATM
D
O
HOH
4
1.00
1
O
38.09
6.842
9.032
22.820
A
O
HOH
43
HETATM
D
O
HOH
4
1.00
1
O
39.55
8.834
17.890
18.077
A
O
HOH
44
HETATM
D
O
HOH
4
1.00
1
O
39.95
5.494
10.461
21.739
A
O
HOH
45
HETATM
D
O
HOH
4
1.00
1
O
40.80
8.634
7.489
26.057
A
O
HOH
46
HETATM
D
O
HOH
4
1.00
1
O
40.91
16.276
21.841
25.391
A
O
HOH
47
HETATM
D
O
HOH
4
1.00
1
O
41.38
7.755
13.487
17.978
A
O
HOH
48
HETATM
D
O
HOH
4
1.00
1
O
41.67
4.878
12.829
25.957
A
O
HOH
49
HETATM
D
O
HOH
4
1.00
1
O
41.96
21.602
18.690
23.460
A
O
HOH
50
HETATM
D
O
HOH
4
1.00
1
O
42.50
8.376
10.880
24.530
A
O
HOH
51
HETATM
D
O
HOH
4
1.00
1
O
42.56
10.888
3.372
16.209
A
O
HOH
52
HETATM
D
O
HOH
4
1.00
1
O
43.03
5.694
12.299
18.230
A
O
HOH
53
HETATM
D
O
HOH
4
1.00
1
O
43.25
24.650
14.544
16.109
A
O
HOH
54
HETATM
D
O
HOH
4
1.00
1
O
43.42
9.561
1.695
19.274
A
O
HOH
55
HETATM
D
O
HOH
4
1.00
1
O
43.66
43.040
25.745
1.898
A
O
HOH
56
HETATM
D
O
HOH
4
1.00
1
O
43.67
23.706
9.807
13.378
A
O
HOH
57
HETATM
D
O
HOH
4
1.00
1
O
43.73
4.722
9.538
24.478
A
O
HOH
58
HETATM
D
O
HOH
4
1.00
1
O
43.75
25.667
13.301
13.749
A
O
HOH
59
HETATM
D
O
HOH
4
1.00
1
O
43.93
12.402
-0.541
11.786
A
O
HOH
60
HETATM
D
O
HOH
4
1.00
1
O
44.79
17.838
3.216
16.004
A
O
HOH
61
HETATM
D
O
HOH
4
1.00
1
O
45.41
9.066
6.280
24.017
A
O
HOH
62
HETATM
D
O
HOH
4
1.00
1
O
45.66
3.323
16.001
25.065
A
O
HOH
63
HETATM
D
O
HOH
4
1.00
1
O
45.71
4.478
10.606
19.259
A
O
HOH
64
HETATM
D
O
HOH
4
1.00
1
O
45.76
8.842
3.446
24.495
A
O
HOH
65
HETATM
D
O
HOH
4
1.00
1
O
45.95
6.592
8.042
13.895
A
O
HOH
66
HETATM
D
O
HOH
4
1.00
1
O
46.06
10.611
20.182
15.386
A
O
HOH
67
HETATM
D
O
HOH
4
1.00
1
O
46.31
21.930
13.041
25.102
A
O
HOH
68
HETATM
D
O
HOH
4
1.00
1
O
46.39
5.755
13.772
23.048
A
O
HOH
69
HETATM
D
O
HOH
4
1.00
1
O
46.39
10.778
4.421
22.353
A
O
HOH
70
HETATM
D
O
HOH
4
1.00
1
O
46.87
13.374
3.858
25.072
A
O
HOH
71
HETATM
D
O
HOH
4
1.00
1
O
47.34
8.194
8.438
17.577
A
O
HOH
72
HETATM
D
O
HOH
4
1.00
1
O
47.79
20.369
9.782
12.591
A
O
HOH
73
HETATM
D
O
HOH
4
1.00
1
O
48.58
8.523
5.483
20.303
A
O
HOH
74
HETATM
D
O
HOH
4
1.00
1
O
48.89
13.530
25.311
20.114
A
O
HOH
75
HETATM
D
O
HOH
4
1.00
1
O
49.96
22.357
15.872
21.042
A
O
HOH
76
HETATM
D
O
HOH
4
1.00
1
O
50.44
5.192
11.557
15.566
A
O
HOH
77
HETATM
D
O
HOH
4
1.00
1
O
50.52
25.190
13.832
18.212
A
O
HOH
78
HETATM
D
O
HOH
4
1.00
1
O
51.03
2.960
13.896
19.582
A
O
HOH
79
HETATM
D
O
HOH
4
1.00
1
O
51.86
26.733
12.785
20.614
A
O
HOH
80
HETATM
D
O
HOH
4
1.00
1
O
52.96
19.250
21.315
23.890
A
O
HOH
81
HETATM
D
O
HOH
4
1.00
1
O
53.67
16.332
25.434
30.037
A
O
HOH
82
HETATM
D
O
HOH
4
1.00
1
O
54.02
2.055
15.825
18.158
A
O
HOH
83
HETATM
D
O
HOH
4
1.00
1
O
54.43
7.296
14.541
14.757
A
O
HOH
84
HETATM
D
O
HOH
4
1.00
1
O
55.03
3.285
16.272
21.455
A
O
HOH
85
HETATM
D
O
HOH
4
1.00
1
O
56.31
6.519
15.354
26.003
A
O
HOH
86
HETATM
D
O
HOH
4
1.00
1
O
56.42
0.973
13.846
23.440
A
O
HOH
87
HETATM
D
O
HOH
4
1.00
1
O
58.13
5.461
13.202
20.788
A
O
HOH
88
HETATM
D
O
HOH
4
1.00
1
O
58.47
7.506
8.622
24.690
A
O
HOH
89
HETATM
D
O
HOH
4
1.00
1
O
61.11
15.211
3.053
23.351
A
O
HOH
90
HETATM
D
O
HOH
4
1.00
1
O
63.90
4.699
16.333
18.451
A
O
HOH
91
HETATM
D
O
HOH
4
1.00
1
O
66.55
16.377
24.064
27.147
A
O
HOH
92
HETATM
D
O
HOH
4
1.00
1
O
0.035894
0.000000
0.000000
0.000000
0.035894
0.000000
0.000000
0.000000
0.018968
0.00000
0.00000
0.00000
Wang, A.H.-J.
Ughetto, G.
Quigley, G.J.
Rich, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
27.860
27.860
52.720
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C27 H29 N O10
527.520
DAUNOMYCIN
DAUNORUBICIN
non-polymer
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
Na 1
22.990
SODIUM ION
non-polymer
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
Y
13
N
N
Y
14
N
C
Y
15
N
N
Y
16
N
C
Y
17
N
C
N
18
N
N
Y
19
N
N
Y
20
N
C
Y
21
N
N
Y
22
N
C
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
O
N
38
N
P
N
39
N
O
N
40
N
O
N
41
N
O
N
42
N
C
N
43
R
C
N
44
N
O
N
45
S
C
N
46
N
O
N
47
N
C
N
48
R
C
N
49
N
N
N
50
N
C
N
51
N
O
N
52
N
N
N
53
N
C
N
54
N
N
N
55
N
C
N
56
N
C
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
O
N
72
N
P
N
73
N
O
N
74
N
O
N
75
N
O
N
76
N
C
N
77
R
C
N
78
N
O
N
79
S
C
N
80
N
O
N
81
N
C
N
82
R
C
Y
83
N
N
Y
84
N
C
Y
85
N
N
Y
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
C
N
91
N
N
N
92
N
N
Y
93
N
C
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
Y
108
N
C
Y
109
N
C
Y
110
N
C
Y
111
N
C
N
112
N
O
Y
113
N
C
N
114
N
C
N
115
N
O
Y
116
N
C
Y
117
N
C
N
118
N
O
Y
119
N
C
N
120
S
C
N
121
N
O
N
122
N
C
N
123
S
C
N
124
N
O
N
125
N
C
N
126
N
O
N
127
N
C
N
128
N
C
Y
129
N
C
Y
130
N
C
N
131
N
O
Y
132
N
C
N
133
N
C
N
134
N
O
Y
135
N
C
N
136
N
C
N
137
R
C
N
138
N
C
N
139
S
C
N
140
N
N
N
141
S
C
N
142
N
O
N
143
S
C
N
144
N
O
N
145
N
C
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
O
N
176
N
P
N
177
N
O
N
178
N
O
N
179
N
O
N
180
N
C
N
181
R
C
N
182
N
O
N
183
S
C
N
184
N
O
N
185
N
C
N
186
R
C
N
187
N
N
N
188
N
C
N
189
N
O
N
190
N
N
N
191
N
C
N
192
N
O
N
193
N
C
N
194
N
C
N
195
N
C
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
H
N
206
N
H
N
207
N
H
N
208
N
H
N
209
N
H
N
210
N
H
N
211
N
O
N
212
N
H
N
213
N
H
N
214
N
NA
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
Y
24
N
sing
Y
25
N
sing
Y
26
N
doub
N
27
N
sing
Y
28
N
sing
Y
29
N
sing
Y
30
N
doub
N
31
N
sing
Y
32
N
doub
N
33
N
sing
N
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
sing
N
102
N
sing
Y
103
N
doub
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
Y
113
N
doub
Y
114
N
sing
N
115
N
sing
Y
116
N
sing
N
117
N
sing
Y
118
N
doub
N
119
N
sing
N
120
N
sing
Y
121
N
sing
N
122
N
sing
N
123
N
sing
Y
124
N
doub
N
125
N
doub
N
126
N
sing
Y
127
N
doub
Y
128
N
sing
N
129
N
sing
Y
130
N
sing
N
131
N
sing
N
132
N
sing
Y
133
N
doub
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
Y
153
N
sing
N
154
N
sing
Y
155
N
doub
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
doub
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
sing
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
doub
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
doub
N
214
N
sing
N
215
N
sing
N
216
N
doub
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
26
1152
1163
10.1021/bi00378a025
3567161
Interactions between an anthracycline antibiotic and DNA: molecular structure of daunomycin complexed to d(CpGpTpApCpG) at 1.2-A resolution.
1987
10.2210/pdb1d11/pdb
pdb_00001d11
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
288.00
1
DIFFRACTOMETER
NICOLET P3X
x-ray
1
1.0
1809.217
DNA (5'-D(*CP*GP*TP*AP*CP*G)-3')
1
syn
polymer
527.520
DAUNOMYCIN
1
syn
non-polymer
22.990
SODIUM ION
1
syn
non-polymer
18.015
water
84
nat
water
no
no
(DC)(DG)(DT)(DA)(DC)(DG)
CGTACG
A
polydeoxyribonucleotide
n
n
n
n
n
n
2.83
56.49
VAPOR DIFFUSION
6.50
pH 6.50, VAPOR DIFFUSION
WATER
1
MPD
1
MGCL2
1
SPERMINE
1
NA CACODYLATE
1
WATER
2
MPD
2
8.171
1
19
A
1
A
6
-2.078
A_DC1:DG6_A
1
0.231
0.192
0.029
-0.159
-16.616
1
19
A
2
A
5
0.689
A_DG2:DC5_A
2
3.325
-0.043
-0.383
-0.045
-3.731
1
20
A
3
A
4
2.144
A_DT3:DA4_A
3
-6.996
-0.205
-0.036
-0.111
3.731
1
20
A
4
A
3
2.144
A_DA4:DT3_A
4
-6.996
0.205
-0.036
-0.111
16.616
1
19
A
5
A
2
0.689
A_DC5:DG2_A
5
3.325
0.043
-0.383
-0.045
-8.171
1
19
A
6
A
1
-2.078
A_DG6:DC1_A
6
0.231
-0.192
0.029
-0.159
6.974
35.036
A
A
1
2
-4.698
A
A
6
5
7.024
-2.824
1.220
1.162
AA_DC1DG2:DC5DG6_AA
1
2.266
-3.771
34.855
2.840
-1.297
3.165
28.557
A
A
2
3
-3.341
A
A
5
4
3.063
-1.644
-1.120
-0.052
AA_DG2DT3:DA4DC5_AA
2
-3.169
6.441
28.337
0.253
1.582
3.246
38.500
A
A
3
4
11.902
A
A
4
3
3.312
7.798
0.000
-0.016
AA_DT3DA4:DT3DA4_AA
3
0.000
0.000
37.731
-1.005
0.000
3.165
28.557
A
A
4
5
-3.341
A
A
3
2
3.063
-1.644
1.120
-0.052
AA_DA4DC5:DG2DT3_AA
4
3.169
-6.441
28.337
0.253
-1.582
6.974
35.036
A
A
5
6
-4.698
A
A
2
1
7.024
-2.824
-1.220
1.162
AA_DC5DG6:DC1DG2_AA
5
-2.266
3.771
34.855
2.840
1.297
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Structure summary
Data collection
Database references
Derived calculations
1
0
1990-10-15
1
1
2008-05-22
1
2
2011-07-13
1
3
2017-02-15
1
4
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.ptnr2_auth_seq_id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
BNL
Y
BNL
1989-10-20
REL
DM1
DAUNOMYCIN
NA
SODIUM ION
HOH
water
DM1
7
2
DM1
DM1
7
A
NA
8
3
NA
NA
8
A
HOH
9
4
HOH
HOH
9
A
HOH
10
4
HOH
HOH
10
A
HOH
11
4
HOH
HOH
11
A
HOH
12
4
HOH
HOH
12
A
HOH
13
4
HOH
HOH
13
A
HOH
14
4
HOH
HOH
14
A
HOH
15
4
HOH
HOH
15
A
HOH
16
4
HOH
HOH
16
A
HOH
17
4
HOH
HOH
17
A
HOH
18
4
HOH
HOH
18
A
HOH
19
4
HOH
HOH
19
A
HOH
20
4
HOH
HOH
20
A
HOH
21
4
HOH
HOH
21
A
HOH
22
4
HOH
HOH
22
A
HOH
23
4
HOH
HOH
23
A
HOH
24
4
HOH
HOH
24
A
HOH
25
4
HOH
HOH
25
A
HOH
26
4
HOH
HOH
26
A
HOH
27
4
HOH
HOH
27
A
HOH
28
4
HOH
HOH
28
A
HOH
29
4
HOH
HOH
29
A
HOH
30
4
HOH
HOH
30
A
HOH
31
4
HOH
HOH
31
A
HOH
32
4
HOH
HOH
32
A
HOH
33
4
HOH
HOH
33
A
HOH
34
4
HOH
HOH
34
A
HOH
35
4
HOH
HOH
35
A
HOH
36
4
HOH
HOH
36
A
HOH
37
4
HOH
HOH
37
A
HOH
38
4
HOH
HOH
38
A
HOH
39
4
HOH
HOH
39
A
HOH
40
4
HOH
HOH
40
A
HOH
41
4
HOH
HOH
41
A
HOH
42
4
HOH
HOH
42
A
HOH
43
4
HOH
HOH
43
A
HOH
44
4
HOH
HOH
44
A
HOH
45
4
HOH
HOH
45
A
HOH
46
4
HOH
HOH
46
A
HOH
47
4
HOH
HOH
47
A
HOH
48
4
HOH
HOH
48
A
HOH
49
4
HOH
HOH
49
A
HOH
50
4
HOH
HOH
50
A
HOH
51
4
HOH
HOH
51
A
HOH
52
4
HOH
HOH
52
A
HOH
53
4
HOH
HOH
53
A
HOH
54
4
HOH
HOH
54
A
HOH
55
4
HOH
HOH
55
A
HOH
56
4
HOH
HOH
56
A
HOH
57
4
HOH
HOH
57
A
HOH
58
4
HOH
HOH
58
A
HOH
59
4
HOH
HOH
59
A
HOH
60
4
HOH
HOH
60
A
HOH
61
4
HOH
HOH
61
A
HOH
62
4
HOH
HOH
62
A
HOH
63
4
HOH
HOH
63
A
HOH
64
4
HOH
HOH
64
A
HOH
65
4
HOH
HOH
65
A
HOH
66
4
HOH
HOH
66
A
HOH
67
4
HOH
HOH
67
A
HOH
68
4
HOH
HOH
68
A
HOH
69
4
HOH
HOH
69
A
HOH
70
4
HOH
HOH
70
A
HOH
71
4
HOH
HOH
71
A
HOH
72
4
HOH
HOH
72
A
HOH
73
4
HOH
HOH
73
A
HOH
74
4
HOH
HOH
74
A
HOH
75
4
HOH
HOH
75
A
HOH
76
4
HOH
HOH
76
A
HOH
77
4
HOH
HOH
77
A
HOH
78
4
HOH
HOH
78
A
HOH
79
4
HOH
HOH
79
A
HOH
80
4
HOH
HOH
80
A
HOH
81
4
HOH
HOH
81
A
HOH
82
4
HOH
HOH
82
A
HOH
83
4
HOH
HOH
83
A
HOH
84
4
HOH
HOH
84
A
HOH
85
4
HOH
HOH
85
A
HOH
86
4
HOH
HOH
86
A
HOH
87
4
HOH
HOH
87
A
HOH
88
4
HOH
HOH
88
A
HOH
89
4
HOH
HOH
89
A
HOH
90
4
HOH
HOH
90
A
HOH
91
4
HOH
HOH
91
A
HOH
92
4
HOH
HOH
92
A
C
1
n
1
DC
1
A
G
2
n
2
DG
2
A
T
3
n
3
DT
3
A
A
4
n
4
DA
4
A
C
5
n
5
DC
5
A
G
6
n
6
DG
6
A
author_defined_assembly
2
dimeric
A
HOH
9
D
O
HOH
1_555
A
NA
8
C
NA
NA
1_555
A
HOH
10
D
O
HOH
1_555
162.2
A
HOH
9
D
O
HOH
1_555
A
NA
8
C
NA
NA
1_555
A
HOH
11
D
O
HOH
1_555
97.8
A
HOH
10
D
O
HOH
1_555
A
NA
8
C
NA
NA
1_555
A
HOH
11
D
O
HOH
1_555
65.9
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
8_665
-y+1,-x+1,-z+1/2
crystal symmetry operation
27.8600000000
27.8600000000
26.3600000000
1
A
A
O
O
HOH
HOH
40
84
2.01
1
A
A
O
O
HOH
HOH
43
89
2.03
1
A
A
O
O
HOH
HOH
46
89
2.10
1
4.34
0.50
119.90
124.24
A
A
A
C2
N3
C4
DC
DC
DC
1
1
1
N
1
-3.79
0.40
121.90
118.11
A
A
A
N3
C4
C5
DC
DC
DC
1
1
1
N
1
3.87
0.60
118.90
122.77
A
A
A
N1
C2
O2
DC
DC
DC
1
1
1
N
1
-3.19
0.40
104.50
101.31
A
A
A
O4'
C4'
C3'
DG
DG
DG
2
2
2
N
1
-8.49
0.80
102.40
93.91
A
A
A
C3'
C2'
C1'
DG
DG
DG
2
2
2
N
1
6.00
0.30
108.30
114.30
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
1
5.02
0.50
111.50
116.52
A
A
A
C5
C6
N1
DG
DG
DG
2
2
2
N
1
-3.34
0.50
104.30
100.96
A
A
A
C5
N7
C8
DG
DG
DG
2
2
2
N
1
3.10
0.50
113.10
116.20
A
A
A
N7
C8
N9
DG
DG
DG
2
2
2
N
1
-2.94
0.40
106.40
103.46
A
A
A
C8
N9
C4
DG
DG
DG
2
2
2
N
1
-5.03
0.70
119.90
114.87
A
A
A
N3
C2
N2
DG
DG
DG
2
2
2
N
1
-5.40
0.60
119.90
114.50
A
A
A
N1
C6
O6
DG
DG
DG
2
2
2
N
1
8.54
1.20
119.70
128.24
A
A
A
C3'
O3'
P
DG
DG
DT
2
2
3
Y
1
-11.30
0.80
109.40
98.10
A
A
A
O5'
C5'
C4'
DT
DT
DT
3
3
3
N
1
-4.57
0.70
108.00
103.43
A
A
A
O4'
C1'
N1
DT
DT
DT
3
3
3
N
1
10.63
1.50
119.60
130.23
A
A
A
OP1
P
OP2
DA
DA
DA
4
4
4
N
1
-5.24
0.80
102.40
97.16
A
A
A
C3'
C2'
C1'
DA
DA
DA
4
4
4
N
1
-4.96
0.70
108.00
103.04
A
A
A
O4'
C1'
N9
DA
DA
DA
4
4
4
N
1
-5.96
0.80
109.40
103.44
A
A
A
O5'
C5'
C4'
DC
DC
DC
5
5
5
N
1
-6.46
0.80
102.40
95.94
A
A
A
C3'
C2'
C1'
DC
DC
DC
5
5
5
N
1
6.60
0.30
108.30
114.90
A
A
A
O4'
C1'
N1
DC
DC
DC
5
5
5
N
1
2.85
0.40
120.30
123.15
A
A
A
C6
N1
C2
DC
DC
DC
5
5
5
N
1
6.32
0.60
118.90
125.22
A
A
A
N1
C2
O2
DC
DC
DC
5
5
5
N
1
-4.42
0.70
121.90
117.48
A
A
A
N3
C2
O2
DC
DC
DC
5
5
5
N
1
-6.92
1.10
118.80
111.88
A
A
A
C2
N1
C1'
DC
DC
DC
5
5
5
N
1
3.02
0.50
128.60
131.62
A
A
A
N3
C4
C5
DG
DG
DG
6
6
6
N
1
3.98
0.50
111.50
115.48
A
A
A
C5
C6
N1
DG
DG
DG
6
6
6
N
1
4.65
0.40
110.80
115.45
A
A
A
C4
C5
N7
DG
DG
DG
6
6
6
N
1
-3.14
0.50
104.30
101.16
A
A
A
C5
N7
C8
DG
DG
DG
6
6
6
N
1
-4.32
0.40
105.40
101.08
A
A
A
N9
C4
C5
DG
DG
DG
6
6
6
N
1
-6.31
0.70
119.90
113.59
A
A
A
N3
C2
N2
DG
DG
DG
6
6
6
N
1
-4.73
0.60
128.60
123.87
A
A
A
C5
C6
O6
DG
DG
DG
6
6
6
N
1
A
A
C2'
C1'
DC
DC
1
1
0.064
0.010
1.519
1.583
N
1
A
A
C2'
C1'
DG
DG
2
2
0.071
0.010
1.519
1.590
N
1
A
A
C6
N1
DG
DG
2
2
-0.068
0.007
1.391
1.323
N
1
A
A
C2
N2
DG
DG
2
2
-0.071
0.010
1.341
1.270
N
1
A
A
C3'
C2'
DT
DT
3
3
-0.054
0.008
1.516
1.462
N
1
A
A
C4
C5
DA
DA
4
4
-0.042
0.007
1.383
1.341
N
1
A
A
N9
C4
DA
DA
4
4
0.044
0.006
1.374
1.418
N
1
A
A
P
O5'
DC
DC
5
5
0.077
0.010
1.593
1.670
N
1
A
A
C5'
C4'
DC
DC
5
5
0.049
0.007
1.512
1.561
N
1
A
A
C2'
C1'
DC
DC
5
5
0.072
0.010
1.519
1.591
N
1
A
A
O4'
C1'
DC
DC
5
5
-0.093
0.012
1.418
1.325
N
1
A
A
N3
C4
DC
DC
5
5
0.063
0.007
1.335
1.398
N
1
A
A
C2
N2
DG
DG
6
6
-0.082
0.010
1.341
1.259
N
1
A
A
OP1
O
DC
HOH
5
61
1.54
1_555
8_665
1
A
A
O
O
HOH
HOH
58
61
1.71
1_555
6_455
1
A
A
O
O
HOH
HOH
46
46
1.73
1_555
7_556
1
A
A
O
O
HOH
HOH
36
85
1.84
1_555
6_565
1
A
A
O
O
HOH
HOH
56
87
1.93
1_555
8_765
1
A
A
O
O
HOH
HOH
57
65
2.03
1_555
6_555
1
A
A
O
O
HOH
HOH
35
65
2.03
1_555
6_555
1
A
A
O
O
HOH
HOH
49
71
2.05
1_555
7_556
1
A
A
O
O
HOH
HOH
57
58
2.18
1_555
4_554
0.1750000
1.180
10.000
5133
1
3.000
TR
isotropic
TR
isotropic
1.180
10.000
84
243
39
120
0
0.034
fix
fix
1.200
1D11
13258
9238
2.000
1
refinement
NUCLSQ
INTERACTIONS BETWEEN AN ANTHRACYCLINE ANTIBIOTIC AND DNA MOLECULAR STRUCTURE OF DAUNOMYCIN COMPLEXED TO D(CPGPTPAPCPG) AT 1.2-ANGSTROMS RESOLUTION
1
N
N
2
N
N
3
N
N
4
N
N
metalc
2.895
A
NA
8
C
NA
NA
1_555
A
HOH
9
D
O
HOH
1_555
metalc
3.044
A
NA
8
C
NA
NA
1_555
A
HOH
10
D
O
HOH
1_555
metalc
2.720
A
NA
8
C
NA
NA
1_555
A
HOH
11
D
O
HOH
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
A
DG
6
A
N1
DG
6
8_665
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
A
DG
6
A
O6
DG
6
8_665
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
A
DG
6
A
N2
DG
6
8_665
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
A
DC
5
A
N3
DC
5
8_665
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
A
DC
5
A
O2
DC
5
8_665
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
A
DC
5
A
N4
DC
5
8_665
hydrog
WATSON-CRICK
A
DT
3
A
N3
DT
3
1_555
A
DA
4
A
N1
DA
4
8_665
hydrog
WATSON-CRICK
A
DT
3
A
O4
DT
3
1_555
A
DA
4
A
N6
DA
4
8_665
hydrog
WATSON-CRICK
A
DA
4
A
N1
DA
4
1_555
A
DT
3
A
N3
DT
3
8_665
hydrog
WATSON-CRICK
A
DA
4
A
N6
DA
4
1_555
A
DT
3
A
O4
DT
3
8_665
hydrog
WATSON-CRICK
A
DC
5
A
N3
DC
5
1_555
A
DG
2
A
N1
DG
2
8_665
hydrog
WATSON-CRICK
A
DC
5
A
N4
DC
5
1_555
A
DG
2
A
O6
DG
2
8_665
hydrog
WATSON-CRICK
A
DC
5
A
O2
DC
5
1_555
A
DG
2
A
N2
DG
2
8_665
hydrog
WATSON-CRICK
A
DG
6
A
N1
DG
6
1_555
A
DC
1
A
N3
DC
1
8_665
hydrog
WATSON-CRICK
A
DG
6
A
N2
DG
6
1_555
A
DC
1
A
O2
DC
1
8_665
hydrog
WATSON-CRICK
A
DG
6
A
O6
DG
6
1_555
A
DC
1
A
N4
DC
1
8_665
DNA
RIGHT HANDED DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, DNA
1D11
PDB
1
1D11
1
6
1D11
1
6
1D11
A
1
1
6
BINDING SITE FOR RESIDUE DM1 A 7
A
DM1
7
Software
13
BINDING SITE FOR RESIDUE NA A 8
A
NA
8
Software
5
A
DC
1
A
DC
1
13
8_665
A
DG
2
A
DG
2
13
8_665
A
DT
3
A
DT
3
13
8_665
A
DA
4
A
DA
4
13
1_555
A
DC
5
A
DC
5
13
1_555
A
DG
6
A
DG
6
13
1_555
A
NA
8
C
NA
13
8_665
A
HOH
12
D
HOH
13
8_665
A
HOH
20
D
HOH
13
8_665
A
HOH
21
D
HOH
13
1_555
A
HOH
25
D
HOH
13
4_554
A
HOH
37
D
HOH
13
8_665
A
HOH
39
D
HOH
13
8_665
A
DG
6
A
DG
6
5
8_665
A
DM1
7
B
DM1
5
8_665
A
HOH
9
D
HOH
5
1_555
A
HOH
10
D
HOH
5
1_555
A
HOH
11
D
HOH
5
1_555
92
P 41 21 2