0.025491
0.014717
0.000000
0.000000
0.029434
0.000000
0.000000
0.000000
0.012819
0.00000
0.00000
0.00000
Frederick, C.A.
Quigley, G.J.
Teng, M.-K.
Coll, M.
Van Der Marel, G.A.
Van Boom, J.H.
Rich, A.
Wang, A.H.-J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
39.230
39.230
78.010
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
Y
13
N
N
Y
14
N
C
Y
15
N
N
Y
16
N
C
Y
17
N
C
N
18
N
N
Y
19
N
N
Y
20
N
C
Y
21
N
N
Y
22
N
C
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
O
N
38
N
P
N
39
N
O
N
40
N
O
N
41
N
O
N
42
N
C
N
43
R
C
N
44
N
O
N
45
S
C
N
46
N
O
N
47
N
C
N
48
R
C
N
49
N
N
N
50
N
C
N
51
N
O
N
52
N
N
N
53
N
C
N
54
N
N
N
55
N
C
N
56
N
C
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
O
N
72
N
P
N
73
N
O
N
74
N
O
N
75
N
O
N
76
N
C
N
77
R
C
N
78
N
O
N
79
S
C
N
80
N
O
N
81
N
C
N
82
R
C
Y
83
N
N
Y
84
N
C
Y
85
N
N
Y
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
C
N
91
N
N
N
92
N
N
Y
93
N
C
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
O
N
109
N
P
N
110
N
O
N
111
N
O
N
112
N
O
N
113
N
C
N
114
R
C
N
115
N
O
N
116
S
C
N
117
N
O
N
118
N
C
N
119
R
C
N
120
N
N
N
121
N
C
N
122
N
O
N
123
N
N
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
Y
24
N
sing
Y
25
N
sing
Y
26
N
doub
N
27
N
sing
Y
28
N
sing
Y
29
N
sing
Y
30
N
doub
N
31
N
sing
Y
32
N
doub
N
33
N
sing
N
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
sing
N
102
N
sing
Y
103
N
doub
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
IX
Eur.J.Biochem.
EJBCAI
0262
0014-2956
181
295
307
10.1111/j.1432-1033.1989.tb14724.x
2714286
Molecular structure of an A-DNA decamer d(ACCGGCCGGT).
1989
10.2210/pdb1d13/pdb
pdb_00001d13
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
283.00
1
DIFFRACTOMETER
NICOLET P3
x-ray
1
1.0
3045.992
DNA (5'-D(*AP*CP*CP*GP*GP*CP*CP*GP*GP*T)-3')
1
syn
polymer
18.015
water
36
nat
water
no
no
(DA)(DC)(DC)(DG)(DG)(DC)(DC)(DG)(DG)(DT)
ACCGGCCGGT
A
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
2.84
56.76
VAPOR DIFFUSION
VAPOR DIFFUSION
ROOM TEMPERATURE
WATER
1
MPD
1
NA CACODYLATE
1
MGCL2
1
SPERMINE
1
-2.139
1
20
A
1
A
10
-6.940
A_DA1:DT10_A
1
-10.373
-0.284
-0.353
-0.077
4.021
1
19
A
2
A
9
6.382
A_DC2:DG9_A
2
-16.800
0.115
0.099
0.044
8.628
1
19
A
3
A
8
3.178
A_DC3:DG8_A
3
-11.248
0.238
0.065
-0.073
6.561
1
19
A
4
A
7
6.634
A_DG4:DC7_A
4
-13.952
-0.063
0.389
-0.103
2.083
1
19
A
5
A
6
1.886
A_DG5:DC6_A
5
-23.083
-0.213
-0.170
-0.166
-2.083
1
19
A
6
A
5
1.886
A_DC6:DG5_A
6
-23.083
0.213
-0.170
-0.166
-6.561
1
19
A
7
A
4
6.634
A_DC7:DG4_A
7
-13.952
0.063
0.389
-0.103
-8.628
1
19
A
8
A
3
3.178
A_DG8:DC3_A
8
-11.248
-0.238
0.065
-0.073
-4.021
1
19
A
9
A
2
6.382
A_DG9:DC2_A
9
-16.800
-0.115
0.099
0.044
2.139
1
20
A
10
A
1
-6.940
A_DT10:DA1_A
10
-10.373
0.284
-0.353
-0.077
2.658
32.004
A
A
1
2
15.765
A
A
10
9
3.171
8.573
0.988
-1.040
AA_DA1DC2:DG9DT10_AA
1
-3.638
6.691
30.653
-3.297
-2.392
2.797
34.977
A
A
2
3
14.182
A
A
9
8
3.177
8.433
-0.561
-1.407
AA_DC2DC3:DG8DG9_AA
2
-3.209
5.396
33.828
-3.523
0.483
2.655
24.887
A
A
3
4
18.228
A
A
8
7
3.336
7.679
-0.423
-1.771
AA_DC3DG4:DC7DG8_AA
3
-4.881
11.586
23.189
-6.298
-0.410
3.049
38.575
A
A
4
5
12.952
A
A
7
6
3.347
8.491
-0.856
-0.963
AA_DG4DG5:DC6DC7_AA
4
0.769
-1.174
37.656
-2.497
1.390
2.886
34.373
A
A
5
6
15.094
A
A
6
5
3.315
8.826
0.000
-1.302
AA_DG5DC6:DG5DC6_AA
5
0.000
0.000
33.253
-3.534
0.000
3.049
38.575
A
A
6
7
12.952
A
A
5
4
3.347
8.491
0.856
-0.963
AA_DC6DC7:DG4DG5_AA
6
-0.769
1.174
37.656
-2.497
-1.390
2.655
24.887
A
A
7
8
18.228
A
A
4
3
3.336
7.679
0.423
-1.771
AA_DC7DG8:DC3DG4_AA
7
4.881
-11.586
23.189
-6.298
0.410
2.797
34.977
A
A
8
9
14.182
A
A
3
2
3.177
8.433
0.561
-1.407
AA_DG8DG9:DC2DC3_AA
8
3.209
-5.396
33.828
-3.523
-0.483
2.658
32.004
A
A
9
10
15.765
A
A
2
1
3.171
8.573
-0.988
-1.040
AA_DG9DT10:DA1DC2_AA
9
3.638
-6.691
30.653
-3.297
2.392
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
1990-10-15
1
1
2008-05-22
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
BNL
Y
BNL
1989-10-20
REL
HOH
water
HOH
11
2
HOH
HOH
11
A
HOH
12
2
HOH
HOH
12
A
HOH
13
2
HOH
HOH
13
A
HOH
14
2
HOH
HOH
14
A
HOH
15
2
HOH
HOH
15
A
HOH
16
2
HOH
HOH
16
A
HOH
17
2
HOH
HOH
17
A
HOH
18
2
HOH
HOH
18
A
HOH
19
2
HOH
HOH
19
A
HOH
20
2
HOH
HOH
20
A
HOH
21
2
HOH
HOH
21
A
HOH
22
2
HOH
HOH
22
A
HOH
23
2
HOH
HOH
23
A
HOH
24
2
HOH
HOH
24
A
HOH
25
2
HOH
HOH
25
A
HOH
26
2
HOH
HOH
26
A
HOH
27
2
HOH
HOH
27
A
HOH
28
2
HOH
HOH
28
A
HOH
29
2
HOH
HOH
29
A
HOH
30
2
HOH
HOH
30
A
HOH
31
2
HOH
HOH
31
A
HOH
32
2
HOH
HOH
32
A
HOH
33
2
HOH
HOH
33
A
HOH
34
2
HOH
HOH
34
A
HOH
35
2
HOH
HOH
35
A
HOH
36
2
HOH
HOH
36
A
HOH
37
2
HOH
HOH
37
A
HOH
38
2
HOH
HOH
38
A
HOH
39
2
HOH
HOH
39
A
HOH
40
2
HOH
HOH
40
A
HOH
41
2
HOH
HOH
41
A
HOH
42
2
HOH
HOH
42
A
HOH
43
2
HOH
HOH
43
A
HOH
44
2
HOH
HOH
44
A
HOH
45
2
HOH
HOH
45
A
HOH
46
2
HOH
HOH
46
A
A
1
n
1
DA
1
A
C
2
n
2
DC
2
A
C
3
n
3
DC
3
A
G
4
n
4
DG
4
A
G
5
n
5
DG
5
A
C
6
n
6
DC
6
A
C
7
n
7
DC
7
A
G
8
n
8
DG
8
A
G
9
n
9
DG
9
A
T
10
n
10
DT
10
A
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
11_555
-x+y,y,-z+1/2
crystal symmetry operation
0.0000000000
0.0000000000
39.0050000000
1
-4.35
0.40
104.50
100.15
A
A
A
O4'
C4'
C3'
DA
DA
DA
1
1
1
N
1
-5.77
0.70
108.00
102.23
A
A
A
O4'
C1'
N9
DA
DA
DA
1
1
1
N
1
-9.06
0.40
104.50
95.44
A
A
A
O4'
C4'
C3'
DC
DC
DC
2
2
2
N
1
5.73
0.70
110.30
116.03
A
A
A
C1'
O4'
C4'
DC
DC
DC
2
2
2
N
1
-6.89
0.80
102.40
95.51
A
A
A
C3'
C2'
C1'
DC
DC
DC
2
2
2
N
1
-5.15
0.70
108.00
102.85
A
A
A
O4'
C1'
N1
DC
DC
DC
2
2
2
N
1
-3.98
0.40
121.90
117.92
A
A
A
N3
C4
C5
DC
DC
DC
2
2
2
N
1
8.83
0.60
118.90
127.73
A
A
A
N1
C2
O2
DC
DC
DC
2
2
2
N
1
-7.87
0.70
121.90
114.03
A
A
A
N3
C2
O2
DC
DC
DC
2
2
2
N
1
-6.33
0.70
118.00
111.67
A
A
A
N3
C4
N4
DC
DC
DC
2
2
2
N
1
10.21
0.70
120.20
130.41
A
A
A
C5
C4
N4
DC
DC
DC
2
2
2
N
1
11.89
1.20
110.70
122.59
A
A
A
O5'
P
OP2
DC
DC
DC
3
3
3
N
1
-8.17
0.40
104.50
96.33
A
A
A
O4'
C4'
C3'
DC
DC
DC
3
3
3
N
1
-5.87
0.80
102.40
96.53
A
A
A
C3'
C2'
C1'
DC
DC
DC
3
3
3
N
1
-10.69
0.70
108.00
97.31
A
A
A
O4'
C1'
N1
DC
DC
DC
3
3
3
N
1
-3.17
0.40
121.90
118.73
A
A
A
N3
C4
C5
DC
DC
DC
3
3
3
N
1
9.15
0.60
118.90
128.05
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
1
-6.47
0.70
121.90
115.43
A
A
A
N3
C2
O2
DC
DC
DC
3
3
3
N
1
-5.33
0.70
118.00
112.67
A
A
A
N3
C4
N4
DC
DC
DC
3
3
3
N
1
8.37
0.70
120.20
128.57
A
A
A
C5
C4
N4
DC
DC
DC
3
3
3
N
1
-9.38
1.20
119.70
110.32
A
A
A
C3'
O3'
P
DC
DC
DG
3
3
4
Y
1
-6.56
0.40
104.50
97.94
A
A
A
O4'
C4'
C3'
DG
DG
DG
4
4
4
N
1
7.85
1.20
115.70
123.55
A
A
A
C5'
C4'
C3'
DG
DG
DG
4
4
4
N
1
-12.60
1.90
109.30
96.70
A
A
A
C5'
C4'
O4'
DG
DG
DG
4
4
4
N
1
-7.04
0.70
102.20
95.16
A
A
A
C4'
C3'
C2'
DG
DG
DG
4
4
4
N
1
-5.56
0.80
105.90
100.34
A
A
A
O4'
C1'
C2'
DG
DG
DG
4
4
4
N
1
9.37
1.40
114.30
123.67
A
A
A
N9
C1'
C2'
DG
DG
DG
4
4
4
N
1
-4.82
0.60
125.10
120.28
A
A
A
C6
N1
C2
DG
DG
DG
4
4
4
N
1
5.24
0.50
111.50
116.74
A
A
A
C5
C6
N1
DG
DG
DG
4
4
4
N
1
9.57
0.90
116.20
125.77
A
A
A
N1
C2
N2
DG
DG
DG
4
4
4
N
1
-13.07
0.70
119.90
106.83
A
A
A
N3
C2
N2
DG
DG
DG
4
4
4
N
1
20.01
1.20
119.70
139.71
A
A
A
C3'
O3'
P
DG
DG
DG
4
4
5
Y
1
9.80
1.50
119.60
129.40
A
A
A
OP1
P
OP2
DG
DG
DG
5
5
5
N
1
-10.06
0.90
105.70
95.64
A
A
A
O5'
P
OP1
DG
DG
DG
5
5
5
N
1
8.03
1.20
115.70
123.73
A
A
A
C5'
C4'
C3'
DG
DG
DG
5
5
5
N
1
-4.45
0.60
125.10
120.65
A
A
A
C6
N1
C2
DG
DG
DG
5
5
5
N
1
3.92
0.60
123.90
127.82
A
A
A
N1
C2
N3
DG
DG
DG
5
5
5
N
1
5.61
0.50
111.50
117.11
A
A
A
C5
C6
N1
DG
DG
DG
5
5
5
N
1
8.45
0.90
116.20
124.65
A
A
A
N1
C2
N2
DG
DG
DG
5
5
5
N
1
-12.58
0.70
119.90
107.32
A
A
A
N3
C2
N2
DG
DG
DG
5
5
5
N
1
8.30
1.20
119.70
128.00
A
A
A
C3'
O3'
P
DG
DG
DC
5
5
6
Y
1
-8.00
0.40
104.50
96.50
A
A
A
O4'
C4'
C3'
DC
DC
DC
6
6
6
N
1
9.79
1.20
115.70
125.49
A
A
A
C5'
C4'
C3'
DC
DC
DC
6
6
6
N
1
-4.85
0.80
102.40
97.55
A
A
A
C3'
C2'
C1'
DC
DC
DC
6
6
6
N
1
-8.53
0.70
108.00
99.47
A
A
A
O4'
C1'
N1
DC
DC
DC
6
6
6
N
1
4.44
0.50
119.90
124.34
A
A
A
C2
N3
C4
DC
DC
DC
6
6
6
N
1
-5.33
0.40
121.90
116.57
A
A
A
N3
C4
C5
DC
DC
DC
6
6
6
N
1
5.24
0.60
118.90
124.14
A
A
A
N1
C2
O2
DC
DC
DC
6
6
6
N
1
-8.16
0.90
105.70
97.54
A
A
A
O5'
P
OP1
DC
DC
DC
7
7
7
N
1
-8.33
0.70
108.00
99.67
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
1
5.37
0.50
119.90
125.27
A
A
A
C2
N3
C4
DC
DC
DC
7
7
7
N
1
-5.97
0.40
121.90
115.93
A
A
A
N3
C4
C5
DC
DC
DC
7
7
7
N
1
3.74
0.50
121.00
124.74
A
A
A
C5
C6
N1
DC
DC
DC
7
7
7
N
1
4.75
0.60
118.90
123.65
A
A
A
N1
C2
O2
DC
DC
DC
7
7
7
N
1
6.45
0.70
120.20
126.65
A
A
A
C5
C4
N4
DC
DC
DC
7
7
7
N
1
10.91
1.20
119.70
130.61
A
A
A
C3'
O3'
P
DC
DC
DG
7
7
8
Y
1
9.15
1.50
119.60
128.75
A
A
A
OP1
P
OP2
DG
DG
DG
8
8
8
N
1
-8.11
0.90
105.70
97.59
A
A
A
O5'
P
OP1
DG
DG
DG
8
8
8
N
1
-4.83
0.60
125.10
120.27
A
A
A
C6
N1
C2
DG
DG
DG
8
8
8
N
1
5.68
0.60
123.90
129.58
A
A
A
N1
C2
N3
DG
DG
DG
8
8
8
N
1
3.17
0.50
111.50
114.67
A
A
A
C5
C6
N1
DG
DG
DG
8
8
8
N
1
-8.22
0.70
119.90
111.68
A
A
A
N3
C2
N2
DG
DG
DG
8
8
8
N
1
-11.15
0.70
108.00
96.85
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
1
-4.21
0.60
125.10
120.89
A
A
A
C6
N1
C2
DG
DG
DG
9
9
9
N
1
-3.95
0.60
118.80
114.85
A
A
A
C4
C5
C6
DG
DG
DG
9
9
9
N
1
6.88
0.50
111.50
118.38
A
A
A
C5
C6
N1
DG
DG
DG
9
9
9
N
1
4.95
0.60
130.40
135.35
A
A
A
C6
C5
N7
DG
DG
DG
9
9
9
N
1
14.24
0.90
116.20
130.44
A
A
A
N1
C2
N2
DG
DG
DG
9
9
9
N
1
-16.18
0.70
119.90
103.72
A
A
A
N3
C2
N2
DG
DG
DG
9
9
9
N
1
-8.30
1.30
126.50
118.20
A
A
A
C4
N9
C1'
DG
DG
DG
9
9
9
N
1
4.98
0.30
108.30
113.28
A
A
A
O4'
C1'
N1
DT
DT
DT
10
10
10
N
1
5.28
0.60
114.60
119.88
A
A
A
N1
C2
N3
DT
DT
DT
10
10
10
N
1
-4.94
0.60
127.20
122.26
A
A
A
C2
N3
C4
DT
DT
DT
10
10
10
N
1
-8.21
0.60
122.30
114.09
A
A
A
N3
C2
O2
DT
DT
DT
10
10
10
N
1
-4.61
0.60
119.90
115.29
A
A
A
N3
C4
O4
DT
DT
DT
10
10
10
N
1
A
A
O3'
C3'
DA
DA
1
1
-0.050
0.006
1.419
1.369
N
1
A
A
C5
N7
DA
DA
1
1
-0.041
0.006
1.388
1.347
N
1
A
A
P
OP1
DC
DC
2
2
-0.111
0.017
1.485
1.374
N
1
A
A
O4'
C4'
DC
DC
2
2
-0.119
0.010
1.446
1.327
N
1
A
A
O3'
C3'
DC
DC
2
2
-0.052
0.006
1.419
1.367
N
1
A
A
N3
C4
DC
DC
2
2
0.060
0.007
1.335
1.395
N
1
A
A
N3
C4
DC
DC
3
3
0.053
0.007
1.335
1.388
N
1
A
A
O3'
C3'
DG
DG
4
4
-0.077
0.006
1.419
1.342
N
1
A
A
N1
C2
DG
DG
4
4
-0.058
0.008
1.373
1.315
N
1
A
A
C6
N1
DG
DG
4
4
-0.061
0.007
1.391
1.330
N
1
A
A
C5
N7
DG
DG
4
4
-0.041
0.006
1.388
1.347
N
1
A
A
C8
N9
DG
DG
4
4
-0.057
0.007
1.374
1.317
N
1
A
A
C2
N2
DG
DG
4
4
-0.114
0.010
1.341
1.227
N
1
A
A
C6
N1
DG
DG
5
5
-0.064
0.007
1.391
1.327
N
1
A
A
C8
N9
DG
DG
5
5
-0.056
0.007
1.374
1.318
N
1
A
A
C2
N2
DG
DG
5
5
-0.100
0.010
1.341
1.241
N
1
A
A
C5'
C4'
DC
DC
6
6
-0.076
0.011
1.509
1.433
N
1
A
A
O4'
C1'
DC
DC
6
6
0.067
0.011
1.420
1.487
N
1
A
A
O3'
C3'
DC
DC
6
6
-0.051
0.006
1.419
1.368
N
1
A
A
N3
C4
DC
DC
6
6
0.049
0.007
1.335
1.384
N
1
A
A
P
O5'
DC
DC
7
7
0.078
0.010
1.593
1.671
N
1
A
A
O3'
C3'
DC
DC
7
7
-0.053
0.006
1.419
1.366
N
1
A
A
P
O5'
DG
DG
8
8
0.082
0.010
1.593
1.675
N
1
A
A
C1'
N9
DG
DG
8
8
-0.094
0.014
1.468
1.374
N
1
A
A
C5
N7
DG
DG
8
8
-0.057
0.006
1.388
1.331
N
1
A
A
C2
N2
DG
DG
8
8
-0.117
0.010
1.341
1.224
N
1
A
A
P
O5'
DG
DG
9
9
0.064
0.010
1.593
1.657
N
1
A
A
C4'
C3'
DG
DG
9
9
0.081
0.010
1.529
1.610
N
1
A
A
O3'
C3'
DG
DG
9
9
-0.046
0.006
1.419
1.373
N
1
A
A
N1
C2
DG
DG
9
9
-0.050
0.008
1.373
1.323
N
1
A
A
C6
N1
DG
DG
9
9
-0.054
0.007
1.391
1.337
N
1
A
A
C2
N2
DG
DG
9
9
-0.094
0.010
1.341
1.247
N
1
A
A
C2'
C1'
DT
DT
10
10
0.062
0.010
1.519
1.581
N
1
A
A
O4'
C4'
DT
DT
10
10
-0.061
0.010
1.446
1.385
N
0.1800000
2.000
20.000
1434
1
2.000
TR
isotropic
TR
isotropic
2.000
20.000
36
238
0
202
0
0.026
fix
fix
2.000
1D13
4200
1434
2.000
1
refinement
NUCLSQ
MOLECULAR STRUCTURE OF AN A-DNA DECAMER D(ACCGGCCGGT)
1
N
N
2
N
N
hydrog
WATSON-CRICK
A
DA
1
A
N1
DA
1
1_555
A
DT
10
A
N3
DT
10
11_555
hydrog
WATSON-CRICK
A
DA
1
A
N6
DA
1
1_555
A
DT
10
A
O4
DT
10
11_555
hydrog
WATSON-CRICK
A
DC
2
A
N3
DC
2
1_555
A
DG
9
A
N1
DG
9
11_555
hydrog
WATSON-CRICK
A
DC
2
A
N4
DC
2
1_555
A
DG
9
A
O6
DG
9
11_555
hydrog
WATSON-CRICK
A
DC
2
A
O2
DC
2
1_555
A
DG
9
A
N2
DG
9
11_555
hydrog
WATSON-CRICK
A
DC
3
A
N3
DC
3
1_555
A
DG
8
A
N1
DG
8
11_555
hydrog
WATSON-CRICK
A
DC
3
A
N4
DC
3
1_555
A
DG
8
A
O6
DG
8
11_555
hydrog
WATSON-CRICK
A
DC
3
A
O2
DC
3
1_555
A
DG
8
A
N2
DG
8
11_555
hydrog
WATSON-CRICK
A
DG
4
A
N1
DG
4
1_555
A
DC
7
A
N3
DC
7
11_555
hydrog
WATSON-CRICK
A
DG
4
A
N2
DG
4
1_555
A
DC
7
A
O2
DC
7
11_555
hydrog
WATSON-CRICK
A
DG
4
A
O6
DG
4
1_555
A
DC
7
A
N4
DC
7
11_555
hydrog
WATSON-CRICK
A
DG
5
A
N1
DG
5
1_555
A
DC
6
A
N3
DC
6
11_555
hydrog
WATSON-CRICK
A
DG
5
A
N2
DG
5
1_555
A
DC
6
A
O2
DC
6
11_555
hydrog
WATSON-CRICK
A
DG
5
A
O6
DG
5
1_555
A
DC
6
A
N4
DC
6
11_555
hydrog
WATSON-CRICK
A
DC
6
A
N3
DC
6
1_555
A
DG
5
A
N1
DG
5
11_555
hydrog
WATSON-CRICK
A
DC
6
A
N4
DC
6
1_555
A
DG
5
A
O6
DG
5
11_555
hydrog
WATSON-CRICK
A
DC
6
A
O2
DC
6
1_555
A
DG
5
A
N2
DG
5
11_555
hydrog
WATSON-CRICK
A
DC
7
A
N3
DC
7
1_555
A
DG
4
A
N1
DG
4
11_555
hydrog
WATSON-CRICK
A
DC
7
A
N4
DC
7
1_555
A
DG
4
A
O6
DG
4
11_555
hydrog
WATSON-CRICK
A
DC
7
A
O2
DC
7
1_555
A
DG
4
A
N2
DG
4
11_555
hydrog
WATSON-CRICK
A
DG
8
A
N1
DG
8
1_555
A
DC
3
A
N3
DC
3
11_555
hydrog
WATSON-CRICK
A
DG
8
A
N2
DG
8
1_555
A
DC
3
A
O2
DC
3
11_555
hydrog
WATSON-CRICK
A
DG
8
A
O6
DG
8
1_555
A
DC
3
A
N4
DC
3
11_555
hydrog
WATSON-CRICK
A
DG
9
A
N1
DG
9
1_555
A
DC
2
A
N3
DC
2
11_555
hydrog
WATSON-CRICK
A
DG
9
A
N2
DG
9
1_555
A
DC
2
A
O2
DC
2
11_555
hydrog
WATSON-CRICK
A
DG
9
A
O6
DG
9
1_555
A
DC
2
A
N4
DC
2
11_555
hydrog
WATSON-CRICK
A
DT
10
A
N3
DT
10
1_555
A
DA
1
A
N1
DA
1
11_555
hydrog
WATSON-CRICK
A
DT
10
A
O4
DT
10
1_555
A
DA
1
A
N6
DA
1
11_555
DNA
A-DNA, DOUBLE HELIX, DNA
1D13
PDB
1
1D13
1
10
1D13
1
10
1D13
A
1
1
10
178
P 61 2 2