HEADER    DNA                                     20-OCT-89   1D14              
TITLE     STRUCTURE OF 11-DEOXYDAUNOMYCIN BOUND TO DNA CONTAINING A             
TITLE    2 PHOSPHOROTHIOATE                                                     
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: DNA (5'-D(*CP*GP*TP*(AS)P*CP*G)-3');                       
COMPND   3 CHAIN: A;                                                            
COMPND   4 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 SYNTHETIC: YES                                                       
KEYWDS    RIGHT HANDED DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, MODIFIED, DNA    
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    L.D.WILLIAMS,M.EGLI,G.UGHETTO,G.A.VAN DER MAREL,J.H.VAN BOOM,         
AUTHOR   2 G.J.QUIGLEY,A.H.-J.WANG,A.RICH,C.A.FREDERICK                         
REVDAT   4   07-FEB-24 1D14    1       REMARK LINK   ATOM                       
REVDAT   3   24-FEB-09 1D14    1       VERSN                                    
REVDAT   2   01-APR-03 1D14    1       JRNL                                     
REVDAT   1   15-OCT-90 1D14    0                                                
JRNL        AUTH   L.D.WILLIAMS,M.EGLI,G.UGHETTO,G.A.VAN DER MAREL,             
JRNL        AUTH 2 J.H.VAN BOOM,G.J.QUIGLEY,A.H.WANG,A.RICH,C.A.FREDERICK       
JRNL        TITL   STRUCTURE OF 11-DEOXYDAUNOMYCIN BOUND TO DNA CONTAINING A    
JRNL        TITL 2 PHOSPHOROTHIOATE.                                            
JRNL        REF    J.MOL.BIOL.                   V. 215   313 1990              
JRNL        REFN                   ISSN 0022-2836                               
JRNL        PMID   2152325                                                      
JRNL        DOI    10.1016/S0022-2836(05)80349-3                                
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.50 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : NUCLSQ                                               
REMARK   3   AUTHORS     : WESTHOF,DUMAS,MORAS                                  
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : NULL                           
REMARK   3   DATA CUTOFF            (SIGMA(F)) : 2.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : NULL                           
REMARK   3   NUMBER OF REFLECTIONS             : 2129                           
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : NULL                            
REMARK   3   FREE R VALUE TEST SET SELECTION  : NULL                            
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.224                           
REMARK   3   R VALUE            (WORKING SET) : NULL                            
REMARK   3   FREE R VALUE                     : NULL                            
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : NULL                            
REMARK   3   FREE R VALUE TEST SET COUNT      : NULL                            
REMARK   3                                                                      
REMARK   3  FIT/AGREEMENT OF MODEL WITH ALL DATA.                               
REMARK   3   R VALUE   (WORKING + TEST SET, NO CUTOFF) : NULL                   
REMARK   3   R VALUE          (WORKING SET, NO CUTOFF) : NULL                   
REMARK   3   FREE R VALUE                  (NO CUTOFF) : NULL                   
REMARK   3   FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : NULL                   
REMARK   3   FREE R VALUE TEST SET COUNT   (NO CUTOFF) : NULL                   
REMARK   3   TOTAL NUMBER OF REFLECTIONS   (NO CUTOFF) : NULL                   
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 0                                       
REMARK   3   NUCLEIC ACID ATOMS       : 120                                     
REMARK   3   HETEROGEN ATOMS          : 37                                      
REMARK   3   SOLVENT ATOMS            : 37                                      
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : NULL                           
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : NULL                            
REMARK   3   ESD FROM SIGMAA              (A) : NULL                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : NULL                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   DISTANCE RESTRAINTS.                    RMS     SIGMA              
REMARK   3    SUGAR-BASE BOND DISTANCE        (A) : NULL  ; NULL                
REMARK   3    SUGAR-BASE BOND ANGLE DISTANCE  (A) : NULL  ; NULL                
REMARK   3    PHOSPHATE BONDS DISTANCE        (A) : NULL  ; NULL                
REMARK   3    PHOSPHATE BOND ANGLE, H-BOND    (A) : NULL  ; NULL                
REMARK   3                                                                      
REMARK   3   PLANE RESTRAINT                  (A) : NULL  ; NULL                
REMARK   3   CHIRAL-CENTER RESTRAINT       (A**3) : NULL  ; NULL                
REMARK   3                                                                      
REMARK   3   NON-BONDED CONTACT RESTRAINTS.                                     
REMARK   3    SINGLE TORSION CONTACT          (A) : NULL  ; NULL                
REMARK   3    MULTIPLE TORSION CONTACT        (A) : NULL  ; NULL                
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   SUGAR-BASE BONDS             (A**2) : NULL  ; NULL                 
REMARK   3   SUGAR-BASE ANGLES            (A**2) : NULL  ; NULL                 
REMARK   3   PHOSPHATE BONDS              (A**2) : NULL  ; NULL                 
REMARK   3   PHOSPHATE BOND ANGLE, H-BOND (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 1D14 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY BNL.                                
REMARK 100 THE DEPOSITION ID IS D_1000172619.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : NULL                               
REMARK 200  TEMPERATURE           (KELVIN) : 283.00                             
REMARK 200  PH                             : 6.00                               
REMARK 200  NUMBER OF CRYSTALS USED        : NULL                               
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : N                                  
REMARK 200  RADIATION SOURCE               : NULL                               
REMARK 200  BEAMLINE                       : NULL                               
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : NULL                               
REMARK 200  WAVELENGTH OR RANGE        (A) : NULL                               
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : DIFFRACTOMETER                     
REMARK 200  DETECTOR MANUFACTURER          : NICOLET P3                         
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : NULL                               
REMARK 200  DATA SCALING SOFTWARE          : NULL                               
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 2129                               
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.500                              
REMARK 200  RESOLUTION RANGE LOW       (A) : NULL                               
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : NULL                               
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : NULL                               
REMARK 200  DATA REDUNDANCY                : NULL                               
REMARK 200  R MERGE                    (I) : NULL                               
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : NULL                               
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : NULL                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : NULL                               
REMARK 200  DATA REDUNDANCY IN SHELL       : NULL                               
REMARK 200  R MERGE FOR SHELL          (I) : NULL                               
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : NULL                               
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: NULL                                           
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL                         
REMARK 200 SOFTWARE USED: NULL                                                  
REMARK 200 STARTING MODEL: NULL                                                 
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 49.28                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.00, VAPOR DIFFUSION                 
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 2 1                          
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,Y,-Z                                                 
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC                           
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350   BIOMT1   2 -1.000000  0.000000  0.000000       28.11368            
REMARK 350   BIOMT2   2  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   2  0.000000  0.000000 -1.000000       52.20565            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH A  44  LIES ON A SPECIAL POSITION.                          
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC             
REMARK 500 SYMMETRY ARE IN CLOSE CONTACT.  AN ATOM LOCATED WITHIN 0.15          
REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A           
REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375             
REMARK 500 INSTEAD OF REMARK 500.  ATOMS WITH NON-BLANK ALTERNATE               
REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS.            
REMARK 500                                                                      
REMARK 500 DISTANCE CUTOFF:                                                     
REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS              
REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS                  
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI  SSYMOP   DISTANCE          
REMARK 500   O    HOH A    43     O    HOH A    43     2857     1.95            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS                                      
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3)               
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   RES CSSEQI ATM2   DEVIATION                     
REMARK 500     DC A   1   C2'    DC A   1   C1'     0.109                       
REMARK 500     DC A   1   N1     DC A   1   C2     -0.080                       
REMARK 500     DC A   1   N3     DC A   1   C4      0.066                       
REMARK 500     DG A   2   P      DG A   2   O5'     0.065                       
REMARK 500     DG A   2   O3'    DG A   2   C3'    -0.036                       
REMARK 500     DG A   2   C6     DG A   2   N1     -0.078                       
REMARK 500     DG A   2   C8     DG A   2   N9     -0.045                       
REMARK 500     DG A   2   C2     DG A   2   N2     -0.141                       
REMARK 500     DT A   3   O4'    DT A   3   C1'     0.089                       
REMARK 500     DT A   3   O3'    DT A   3   C3'    -0.052                       
REMARK 500     DC A   5   P      DC A   5   OP1    -0.125                       
REMARK 500     DC A   5   P      DC A   5   O5'     0.105                       
REMARK 500     DC A   5   C5'    DC A   5   C4'     0.051                       
REMARK 500     DC A   5   O4'    DC A   5   C1'    -0.086                       
REMARK 500     DC A   5   O4'    DC A   5   C4'    -0.080                       
REMARK 500     DC A   5   N1     DC A   5   C6      0.039                       
REMARK 500     DC A   5   N3     DC A   5   C4      0.070                       
REMARK 500     DG A   6   P      DG A   6   O5'     0.066                       
REMARK 500     DG A   6   C4'    DG A   6   C3'     0.093                       
REMARK 500     DG A   6   O4'    DG A   6   C1'     0.090                       
REMARK 500     DG A   6   N1     DG A   6   C2     -0.061                       
REMARK 500     DG A   6   C6     DG A   6   N1     -0.059                       
REMARK 500     DG A   6   C2     DG A   6   N2     -0.116                       
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500     DC A   1   C3' -  C2' -  C1' ANGL. DEV. =  -5.3 DEGREES          
REMARK 500     DC A   1   O4' -  C1' -  N1  ANGL. DEV. = -11.7 DEGREES          
REMARK 500     DC A   1   C2  -  N3  -  C4  ANGL. DEV. =   4.3 DEGREES          
REMARK 500     DC A   1   N3  -  C4  -  C5  ANGL. DEV. =  -5.2 DEGREES          
REMARK 500     DC A   1   C3' -  O3' -  P   ANGL. DEV. =  -8.2 DEGREES          
REMARK 500     DG A   2   P   -  O5' -  C5' ANGL. DEV. = -12.3 DEGREES          
REMARK 500     DG A   2   O4' -  C4' -  C3' ANGL. DEV. =  -2.4 DEGREES          
REMARK 500     DG A   2   C3' -  C2' -  C1' ANGL. DEV. =  -7.8 DEGREES          
REMARK 500     DG A   2   O4' -  C1' -  N9  ANGL. DEV. =   3.3 DEGREES          
REMARK 500     DG A   2   C4  -  C5  -  C6  ANGL. DEV. =  -4.6 DEGREES          
REMARK 500     DG A   2   C5  -  C6  -  N1  ANGL. DEV. =   7.3 DEGREES          
REMARK 500     DG A   2   N7  -  C8  -  N9  ANGL. DEV. =  -4.5 DEGREES          
REMARK 500     DG A   2   C8  -  N9  -  C4  ANGL. DEV. =   5.1 DEGREES          
REMARK 500     DG A   2   N9  -  C4  -  C5  ANGL. DEV. =  -2.9 DEGREES          
REMARK 500     DG A   2   N3  -  C4  -  N9  ANGL. DEV. =   5.0 DEGREES          
REMARK 500     DG A   2   C6  -  C5  -  N7  ANGL. DEV. =   3.8 DEGREES          
REMARK 500     DG A   2   N1  -  C2  -  N2  ANGL. DEV. =   7.6 DEGREES          
REMARK 500     DG A   2   N3  -  C2  -  N2  ANGL. DEV. =  -7.3 DEGREES          
REMARK 500     DG A   2   C5  -  C6  -  O6  ANGL. DEV. =  -7.8 DEGREES          
REMARK 500     DG A   2   C3' -  O3' -  P   ANGL. DEV. =   8.9 DEGREES          
REMARK 500     DT A   3   O5' -  P   -  OP2 ANGL. DEV. =   8.9 DEGREES          
REMARK 500     DT A   3   P   -  O5' -  C5' ANGL. DEV. = -14.1 DEGREES          
REMARK 500     DT A   3   O4' -  C4' -  C3' ANGL. DEV. =   4.4 DEGREES          
REMARK 500     DT A   3   O4' -  C1' -  N1  ANGL. DEV. =  -9.7 DEGREES          
REMARK 500     DC A   5   O4' -  C4' -  C3' ANGL. DEV. =  -2.9 DEGREES          
REMARK 500     DC A   5   C1' -  O4' -  C4' ANGL. DEV. =   5.2 DEGREES          
REMARK 500     DC A   5   O4' -  C1' -  N1  ANGL. DEV. =  12.1 DEGREES          
REMARK 500     DC A   5   C2  -  N3  -  C4  ANGL. DEV. =   3.4 DEGREES          
REMARK 500     DC A   5   N3  -  C4  -  C5  ANGL. DEV. =  -4.8 DEGREES          
REMARK 500     DC A   5   C4  -  C5  -  C6  ANGL. DEV. =   3.2 DEGREES          
REMARK 500     DC A   5   C5  -  C4  -  N4  ANGL. DEV. =   8.8 DEGREES          
REMARK 500     DC A   5   C3' -  O3' -  P   ANGL. DEV. =   7.2 DEGREES          
REMARK 500     DG A   6   O5' -  P   -  OP1 ANGL. DEV. = -16.9 DEGREES          
REMARK 500     DG A   6   N1  -  C2  -  N3  ANGL. DEV. =   4.9 DEGREES          
REMARK 500     DG A   6   C2  -  N3  -  C4  ANGL. DEV. =  -4.1 DEGREES          
REMARK 500     DG A   6   C5  -  C6  -  N1  ANGL. DEV. =   3.2 DEGREES          
REMARK 500     DG A   6   N1  -  C2  -  N2  ANGL. DEV. =   7.0 DEGREES          
REMARK 500     DG A   6   N3  -  C2  -  N2  ANGL. DEV. = -11.9 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DM3 A 7                   
DBREF  1D14 A    1     6  PDB    1D14     1D14             1      6             
SEQRES   1 A    6   DC  DG  DT  AS  DC  DG                                      
MODRES 1D14  AS A    4   DA                                                     
HET     AS  A   4      21                                                       
HET    DM3  A   7      37                                                       
HETNAM      AS 2-DEOXY-ADENOSINE -5'-THIO-MONOPHOSPHATE                         
HETNAM     DM3 6-DEOXYDAUNOMYCIN                                                
FORMUL   1   AS    C10 H14 N5 O5 P S                                            
FORMUL   2  DM3    C27 H29 N O9                                                 
FORMUL   3  HOH   *37(H2 O)                                                     
LINK         O3'  DT A   3                 P    AS A   4     1555   1555  1.56  
LINK         O3'  AS A   4                 P    DC A   5     1555   1555  1.58  
SITE     1 AC1 11  DC A   1   DG A   2   DT A   3   AS A   4                    
SITE     2 AC1 11 HOH A  12  HOH A  13  HOH A  15  HOH A  17                    
SITE     3 AC1 11 HOH A  26  HOH A  29  HOH A  39                               
CRYST1   17.730   19.130   26.360  90.00  98.01  90.00 P 1 2 1       2          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.056402  0.000000  0.007937        0.00000                         
SCALE2      0.000000  0.052274  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.038310        0.00000                         
ATOM      1  O5'  DC A   1      12.518  26.434  35.216  1.00 29.60           O  
ATOM      2  C5'  DC A   1      13.345  27.165  36.213  1.00 27.71           C  
ATOM      3  C4'  DC A   1      14.279  26.291  37.006  1.00 25.98           C  
ATOM      4  O4'  DC A   1      13.595  25.234  37.689  1.00 23.98           O  
ATOM      5  C3'  DC A   1      15.354  25.499  36.162  1.00 25.78           C  
ATOM      6  O3'  DC A   1      16.589  25.703  36.885  1.00 26.99           O  
ATOM      7  C2'  DC A   1      14.904  24.059  36.104  1.00 23.42           C  
ATOM      8  C1'  DC A   1      14.182  24.016  37.563  1.00 20.07           C  
ATOM      9  N1   DC A   1      12.918  23.233  37.471  1.00 17.06           N  
ATOM     10  C2   DC A   1      13.046  21.926  37.569  1.00 15.05           C  
ATOM     11  O2   DC A   1      14.124  21.433  37.742  1.00 15.38           O  
ATOM     12  N3   DC A   1      11.937  21.172  37.467  1.00 14.97           N  
ATOM     13  C4   DC A   1      10.653  21.685  37.241  1.00 15.12           C  
ATOM     14  N4   DC A   1       9.569  20.852  37.151  1.00 14.71           N  
ATOM     15  C5   DC A   1      10.541  23.079  37.139  1.00 16.12           C  
ATOM     16  C6   DC A   1      11.683  23.831  37.270  1.00 16.22           C  
ATOM     17  P    DG A   2      17.562  26.687  36.109  1.00 28.15           P  
ATOM     18  OP1  DG A   2      18.731  26.862  36.998  1.00 29.04           O  
ATOM     19  OP2  DG A   2      16.873  27.750  35.507  1.00 28.37           O  
ATOM     20  O5'  DG A   2      18.097  25.711  34.880  1.00 26.78           O  
ATOM     21  C5'  DG A   2      18.691  24.577  35.437  1.00 24.63           C  
ATOM     22  C4'  DG A   2      18.907  23.576  34.353  1.00 23.48           C  
ATOM     23  O4'  DG A   2      17.644  22.971  33.927  1.00 21.88           O  
ATOM     24  C3'  DG A   2      19.454  24.182  33.003  1.00 23.69           C  
ATOM     25  O3'  DG A   2      20.198  23.116  32.532  1.00 25.48           O  
ATOM     26  C2'  DG A   2      18.157  24.479  32.164  1.00 21.41           C  
ATOM     27  C1'  DG A   2      17.489  23.092  32.472  1.00 18.50           C  
ATOM     28  N9   DG A   2      16.123  23.144  32.096  1.00 15.75           N  
ATOM     29  C8   DG A   2      15.442  24.279  31.974  1.00 14.76           C  
ATOM     30  N7   DG A   2      14.204  23.991  31.562  1.00 14.82           N  
ATOM     31  C5   DG A   2      14.165  22.632  31.420  1.00 14.15           C  
ATOM     32  C6   DG A   2      13.181  21.714  30.986  1.00 12.82           C  
ATOM     33  O6   DG A   2      11.996  22.110  30.693  1.00 13.61           O  
ATOM     34  N1   DG A   2      13.460  20.431  31.005  1.00 12.14           N  
ATOM     35  C2   DG A   2      14.662  19.975  31.349  1.00 11.34           C  
ATOM     36  N2   DG A   2      14.954  18.811  31.369  1.00 10.90           N  
ATOM     37  N3   DG A   2      15.657  20.750  31.705  1.00 13.46           N  
ATOM     38  C4   DG A   2      15.359  22.059  31.750  1.00 13.57           C  
ATOM     39  P    DT A   3      21.790  23.051  32.217  1.00 26.39           P  
ATOM     40  OP1  DT A   3      22.326  23.404  33.489  1.00 27.10           O  
ATOM     41  OP2  DT A   3      21.890  23.875  31.013  1.00 26.80           O  
ATOM     42  O5'  DT A   3      22.094  21.469  32.129  1.00 24.35           O  
ATOM     43  C5'  DT A   3      21.641  21.029  30.837  1.00 21.78           C  
ATOM     44  C4'  DT A   3      21.074  19.635  31.028  1.00 19.68           C  
ATOM     45  O4'  DT A   3      19.632  19.746  31.004  1.00 18.09           O  
ATOM     46  C3'  DT A   3      21.552  18.701  29.927  1.00 18.81           C  
ATOM     47  O3'  DT A   3      21.686  17.398  30.318  1.00 19.77           O  
ATOM     48  C2'  DT A   3      20.421  18.780  28.863  1.00 17.55           C  
ATOM     49  C1'  DT A   3      19.202  19.020  29.753  1.00 15.82           C  
ATOM     50  N1   DT A   3      18.176  20.017  29.263  1.00 13.43           N  
ATOM     51  C2   DT A   3      17.019  19.372  28.844  1.00 12.58           C  
ATOM     52  O2   DT A   3      16.890  18.178  28.863  1.00 13.21           O  
ATOM     53  N3   DT A   3      16.029  20.164  28.422  1.00 12.42           N  
ATOM     54  C4   DT A   3      16.057  21.531  28.350  1.00 12.87           C  
ATOM     55  O4   DT A   3      15.057  22.214  27.981  1.00 12.86           O  
ATOM     56  C5   DT A   3      17.292  22.157  28.743  1.00 13.54           C  
ATOM     57  C7   DT A   3      17.418  23.640  28.701  1.00 13.57           C  
ATOM     58  C6   DT A   3      18.293  21.362  29.207  1.00 13.19           C  
HETATM   59  P    AS A   4      22.251  16.233  29.453  1.00 22.11           P  
HETATM   60  OP1  AS A   4      22.227  14.994  30.130  1.00 20.29           O  
HETATM   61  S2P  AS A   4      23.517  16.773  28.574  1.00 26.04           S  
HETATM   62  O5'  AS A   4      20.952  15.993  28.385  1.00 20.06           O  
HETATM   63  C5'  AS A   4      21.146  14.967  27.428  1.00 18.59           C  
HETATM   64  C4'  AS A   4      19.722  14.515  27.049  1.00 17.51           C  
HETATM   65  O4'  AS A   4      18.733  15.575  27.127  1.00 15.83           O  
HETATM   66  C3'  AS A   4      19.679  13.968  25.544  1.00 17.65           C  
HETATM   67  O3'  AS A   4      18.993  12.776  25.581  1.00 19.85           O  
HETATM   68  C2'  AS A   4      19.067  15.082  24.861  1.00 15.07           C  
HETATM   69  C1'  AS A   4      18.075  15.653  25.788  1.00 12.52           C  
HETATM   70  N9   AS A   4      17.836  17.033  25.618  1.00 10.52           N  
HETATM   71  C8   AS A   4      18.583  18.058  25.785  1.00  8.97           C  
HETATM   72  N7   AS A   4      18.045  19.230  25.579  1.00  9.74           N  
HETATM   73  C5   AS A   4      16.769  18.873  25.208  1.00  9.34           C  
HETATM   74  C6   AS A   4      15.669  19.733  24.812  1.00  8.44           C  
HETATM   75  N6   AS A   4      15.671  21.055  24.754  1.00  9.48           N  
HETATM   76  N1   AS A   4      14.584  19.025  24.516  1.00  9.17           N  
HETATM   77  C2   AS A   4      14.527  17.705  24.583  1.00  7.82           C  
HETATM   78  N3   AS A   4      15.474  16.799  24.889  1.00  9.77           N  
HETATM   79  C4   AS A   4      16.589  17.549  25.202  1.00  9.26           C  
ATOM     80  P    DC A   5      19.318  11.653  24.526  1.00 20.74           P  
ATOM     81  OP1  DC A   5      18.683  10.496  24.856  1.00 20.52           O  
ATOM     82  OP2  DC A   5      20.739  11.840  24.102  1.00 22.16           O  
ATOM     83  O5'  DC A   5      18.421  12.189  23.188  1.00 21.15           O  
ATOM     84  C5'  DC A   5      17.025  12.074  23.116  1.00 20.30           C  
ATOM     85  C4'  DC A   5      16.521  12.931  21.910  1.00 18.31           C  
ATOM     86  O4'  DC A   5      16.516  14.257  22.238  1.00 16.89           O  
ATOM     87  C3'  DC A   5      17.323  12.942  20.565  1.00 19.32           C  
ATOM     88  O3'  DC A   5      16.439  12.648  19.471  1.00 21.97           O  
ATOM     89  C2'  DC A   5      17.957  14.291  20.508  1.00 17.45           C  
ATOM     90  C1'  DC A   5      16.838  15.092  21.252  1.00 14.42           C  
ATOM     91  N1   DC A   5      17.348  16.424  21.552  1.00 12.77           N  
ATOM     92  C2   DC A   5      16.377  17.368  21.586  1.00 10.93           C  
ATOM     93  O2   DC A   5      15.226  17.032  21.420  1.00 12.29           O  
ATOM     94  N3   DC A   5      16.758  18.637  21.765  1.00 11.24           N  
ATOM     95  C4   DC A   5      18.088  19.014  22.016  1.00 10.02           C  
ATOM     96  N4   DC A   5      18.255  20.342  22.206  1.00 10.80           N  
ATOM     97  C5   DC A   5      19.041  18.008  22.012  1.00 10.81           C  
ATOM     98  C6   DC A   5      18.692  16.755  21.801  1.00 11.33           C  
ATOM     99  P    DG A   6      16.378  11.307  18.630  1.00 23.81           P  
ATOM    100  OP1  DG A   6      15.907  10.187  19.340  1.00 23.93           O  
ATOM    101  OP2  DG A   6      17.618  11.375  17.845  1.00 23.97           O  
ATOM    102  O5'  DG A   6      14.960  11.315  17.768  1.00 23.11           O  
ATOM    103  C5'  DG A   6      14.192  12.494  17.761  1.00 22.43           C  
ATOM    104  C4'  DG A   6      13.228  12.466  16.560  1.00 21.21           C  
ATOM    105  O4'  DG A   6      13.373  13.726  15.945  1.00 20.29           O  
ATOM    106  C3'  DG A   6      13.559  11.442  15.346  1.00 21.13           C  
ATOM    107  O3'  DG A   6      12.248  11.036  14.885  1.00 23.30           O  
ATOM    108  C2'  DG A   6      14.570  12.171  14.558  1.00 19.14           C  
ATOM    109  C1'  DG A   6      14.118  13.616  14.636  1.00 16.71           C  
ATOM    110  N9   DG A   6      15.184  14.537  14.765  1.00 14.48           N  
ATOM    111  C8   DG A   6      16.435  14.153  15.035  1.00 14.26           C  
ATOM    112  N7   DG A   6      17.280  15.155  15.175  1.00 14.09           N  
ATOM    113  C5   DG A   6      16.499  16.246  14.928  1.00 12.74           C  
ATOM    114  C6   DG A   6      16.802  17.607  14.935  1.00 12.45           C  
ATOM    115  O6   DG A   6      17.951  18.109  15.193  1.00 12.82           O  
ATOM    116  N1   DG A   6      15.776  18.408  14.652  1.00 12.51           N  
ATOM    117  C2   DG A   6      14.569  17.952  14.416  1.00 11.46           C  
ATOM    118  N2   DG A   6      13.617  18.678  14.158  1.00 12.41           N  
ATOM    119  N3   DG A   6      14.146  16.701  14.398  1.00 12.81           N  
ATOM    120  C4   DG A   6      15.205  15.901  14.687  1.00 12.87           C  
TER     121       DG A   6                                                      
HETATM  122  C1  DM3 A   7       9.002  21.100  33.532  1.00 12.65           C  
HETATM  123  C2  DM3 A   7       7.680  20.629  33.252  1.00 12.64           C  
HETATM  124  C3  DM3 A   7       7.394  19.282  33.174  1.00 12.83           C  
HETATM  125  C4  DM3 A   7       8.420  18.382  33.345  1.00 12.52           C  
HETATM  126  O4  DM3 A   7       8.168  17.010  33.262  1.00 14.79           O  
HETATM  127  C5  DM3 A   7       9.732  18.817  33.650  1.00 11.67           C  
HETATM  128  C6  DM3 A   7      10.789  17.952  33.814  1.00 10.41           C  
HETATM  129  O6  DM3 A   7      10.476  16.610  33.732  1.00 12.97           O  
HETATM  130  C7  DM3 A   7      12.086  18.417  34.093  1.00 10.93           C  
HETATM  131  C8  DM3 A   7      13.168  17.576  34.266  1.00 11.28           C  
HETATM  132  O8  DM3 A   7      13.135  16.191  34.194  1.00 13.49           O  
HETATM  133  C9  DM3 A   7      14.425  18.170  34.564  1.00 12.75           C  
HETATM  134  C10 DM3 A   7      15.523  17.148  34.725  1.00 14.88           C  
HETATM  135  O10 DM3 A   7      15.669  16.622  33.324  1.00 18.13           O  
HETATM  136  C11 DM3 A   7      16.792  17.814  35.233  1.00 15.29           C  
HETATM  137  C12 DM3 A   7      17.075  19.194  34.766  1.00 15.39           C  
HETATM  138  O12 DM3 A   7      17.326  19.016  33.273  1.00 16.87           O  
HETATM  139  C13 DM3 A   7      18.423  19.836  35.155  1.00 17.56           C  
HETATM  140  O13 DM3 A   7      18.298  20.856  36.045  1.00 20.08           O  
HETATM  141  C14 DM3 A   7      19.687  19.455  34.442  1.00 17.70           C  
HETATM  142  C15 DM3 A   7      15.960  20.185  34.958  1.00 13.38           C  
HETATM  143  C16 DM3 A   7      14.649  19.518  34.659  1.00 11.65           C  
HETATM  144  C17 DM3 A   7      13.571  20.381  34.452  1.00 11.16           C  
HETATM  145  C18 DM3 A   7      12.340  19.745  34.167  1.00 10.36           C  
HETATM  146  C19 DM3 A   7      11.275  20.644  33.981  1.00 11.06           C  
HETATM  147  O19 DM3 A   7      11.439  21.952  34.014  1.00 12.68           O  
HETATM  148  C20 DM3 A   7       9.997  20.141  33.720  1.00 10.99           C  
HETATM  149  C21 DM3 A   7       6.809  16.663  32.939  1.00 14.75           C  
HETATM  150  C1' DM3 A   7      16.091  15.299  33.003  1.00 18.97           C  
HETATM  151  C2' DM3 A   7      15.820  14.997  31.529  1.00 19.58           C  
HETATM  152  C3' DM3 A   7      16.874  15.676  30.696  1.00 19.93           C  
HETATM  153  N3' DM3 A   7      16.658  15.042  29.333  1.00 19.92           N  
HETATM  154  C4' DM3 A   7      18.372  15.415  31.105  1.00 19.92           C  
HETATM  155  O4' DM3 A   7      18.616  14.002  30.939  1.00 20.02           O  
HETATM  156  C5' DM3 A   7      18.532  15.801  32.566  1.00 20.17           C  
HETATM  157  O5' DM3 A   7      17.478  15.017  33.332  1.00 20.42           O  
HETATM  158  C6' DM3 A   7      19.918  15.575  33.133  1.00 19.99           C  
HETATM  159  O   HOH A   8      14.838  10.973  30.630  1.00 44.06           O  
HETATM  160  O   HOH A   9      20.454  15.796  12.761  1.00 42.65           O  
HETATM  161  O   HOH A  10       3.142  21.278  22.835  1.00 32.98           O  
HETATM  162  O   HOH A  11      15.887  27.349  32.565  1.00 36.41           O  
HETATM  163  O   HOH A  12       8.543  15.176  35.451  1.00 25.93           O  
HETATM  164  O   HOH A  13      16.897  21.517  38.646  1.00 32.57           O  
HETATM  165  O   HOH A  14       7.246  17.224  36.889  1.00 33.00           O  
HETATM  166  O   HOH A  15      18.354  14.432  36.235  1.00 33.48           O  
HETATM  167  O   HOH A  16       8.719  24.891  34.075  1.00 63.61           O  
HETATM  168  O   HOH A  17      16.862  12.582  29.040  1.00 40.10           O  
HETATM  169  O   HOH A  18      22.751  17.785  36.048  1.00 37.06           O  
HETATM  170  O   HOH A  19      21.006  13.727  21.782  1.00 25.18           O  
HETATM  171  O   HOH A  20      18.042  22.155  41.792  1.00 55.71           O  
HETATM  172  O   HOH A  21      10.145  23.553  30.414  1.00 49.74           O  
HETATM  173  O   HOH A  22      20.248   7.416  29.153  1.00 40.63           O  
HETATM  174  O   HOH A  23       6.736  23.042  24.743  1.00 39.29           O  
HETATM  175  O   HOH A  24       1.857  21.510  25.847  1.00 34.92           O  
HETATM  176  O   HOH A  25      12.403  26.241  31.165  1.00 56.87           O  
HETATM  177  O   HOH A  26      21.209  12.972  30.133  1.00 35.55           O  
HETATM  178  O   HOH A  27       6.856  28.988  24.896  1.00 56.55           O  
HETATM  179  O   HOH A  28      17.240  11.334  32.922  1.00 49.97           O  
HETATM  180  O   HOH A  29      14.197  14.574  28.524  1.00 29.05           O  
HETATM  181  O   HOH A  30      18.089  10.579  28.702  1.00 51.39           O  
HETATM  182  O   HOH A  31      13.986  24.218  27.734  1.00 30.91           O  
HETATM  183  O   HOH A  32      10.544  24.022  27.196  1.00 51.49           O  
HETATM  184  O   HOH A  33      13.571  28.187  40.121  1.00 58.11           O  
HETATM  185  O   HOH A  34      22.180  28.918  31.754  1.00 57.44           O  
HETATM  186  O   HOH A  35      21.091  20.390  37.996  1.00 49.15           O  
HETATM  187  O   HOH A  36       3.318  12.223  19.392  1.00 38.96           O  
HETATM  188  O   HOH A  37      19.613  29.929  34.392  1.00 56.57           O  
HETATM  189  O   HOH A  38      17.571   7.946  29.361  1.00 48.39           O  
HETATM  190  O   HOH A  39       4.673  14.034  33.956  1.00 57.83           O  
HETATM  191  O   HOH A  40      15.220  29.155  26.845  1.00 47.49           O  
HETATM  192  O   HOH A  41       6.816  12.305  38.207  1.00 54.63           O  
HETATM  193  O   HOH A  42       3.749   7.613  25.124  1.00 55.61           O  
HETATM  194  O   HOH A  43      23.479  19.807  26.904  1.00 50.16           O  
HETATM  195  O   HOH A  44      22.922  17.832  26.103  0.50 36.43           O  
CONECT   47   59                                                                
CONECT   59   47   60   61   62                                                 
CONECT   60   59                                                                
CONECT   61   59                                                                
CONECT   62   59   63                                                           
CONECT   63   62   64                                                           
CONECT   64   63   65   66                                                      
CONECT   65   64   69                                                           
CONECT   66   64   67   68                                                      
CONECT   67   66   80                                                           
CONECT   68   66   69                                                           
CONECT   69   65   68   70                                                      
CONECT   70   69   71   79                                                      
CONECT   71   70   72                                                           
CONECT   72   71   73                                                           
CONECT   73   72   74   79                                                      
CONECT   74   73   75   76                                                      
CONECT   75   74                                                                
CONECT   76   74   77                                                           
CONECT   77   76   78                                                           
CONECT   78   77   79                                                           
CONECT   79   70   73   78                                                      
CONECT   80   67                                                                
CONECT  122  123  148                                                           
CONECT  123  122  124                                                           
CONECT  124  123  125                                                           
CONECT  125  124  126  127                                                      
CONECT  126  125  149                                                           
CONECT  127  125  128  148                                                      
CONECT  128  127  129  130                                                      
CONECT  129  128                                                                
CONECT  130  128  131  145                                                      
CONECT  131  130  132  133                                                      
CONECT  132  131                                                                
CONECT  133  131  134  143                                                      
CONECT  134  133  135  136                                                      
CONECT  135  134  150                                                           
CONECT  136  134  137                                                           
CONECT  137  136  138  139  142                                                 
CONECT  138  137                                                                
CONECT  139  137  140  141                                                      
CONECT  140  139                                                                
CONECT  141  139                                                                
CONECT  142  137  143                                                           
CONECT  143  133  142  144                                                      
CONECT  144  143  145                                                           
CONECT  145  130  144  146                                                      
CONECT  146  145  147  148                                                      
CONECT  147  146                                                                
CONECT  148  122  127  146                                                      
CONECT  149  126                                                                
CONECT  150  135  151  157                                                      
CONECT  151  150  152                                                           
CONECT  152  151  153  154                                                      
CONECT  153  152                                                                
CONECT  154  152  155  156                                                      
CONECT  155  154                                                                
CONECT  156  154  157  158                                                      
CONECT  157  150  156                                                           
CONECT  158  156                                                                
MASTER      309    0    2    0    0    0    3    6  194    1   60    1          
END