0.00
5.220
7.320
12.550
A
O5'
DG
1
ATOM
A
O5'
DG
1
1
1.00
1
O
0.00
6.590
7.150
12.900
A
C5'
DG
1
ATOM
A
C5'
DG
1
1
1.00
1
C
0.00
7.330
6.280
11.900
A
C4'
DG
1
ATOM
A
C4'
DG
1
1
1.00
1
C
0.00
6.730
4.980
11.910
A
O4'
DG
1
ATOM
A
O4'
DG
1
1
1.00
1
O
0.00
7.220
6.820
10.480
A
C3'
DG
1
ATOM
A
C3'
DG
1
1
1.00
1
C
0.00
8.540
6.970
9.920
A
O3'
DG
1
ATOM
A
O3'
DG
1
1
1.00
1
O
0.00
6.350
5.810
9.750
A
C2'
DG
1
ATOM
A
C2'
DG
1
1
1.00
1
C
0.00
6.590
4.540
10.550
A
C1'
DG
1
ATOM
A
C1'
DG
1
1
1.00
1
C
0.00
5.440
3.600
10.500
A
N9
DG
1
ATOM
A
N9
DG
1
1
1.00
1
N
0.00
4.210
3.800
10.980
A
C8
DG
1
ATOM
A
C8
DG
1
1
1.00
1
C
0.00
3.540
2.640
11.010
A
N7
DG
1
ATOM
A
N7
DG
1
1
1.00
1
N
0.00
4.360
1.700
10.560
A
C5
DG
1
ATOM
A
C5
DG
1
1
1.00
1
C
0.00
4.240
0.330
10.420
A
C6
DG
1
ATOM
A
C6
DG
1
1
1.00
1
C
0.00
3.210
-0.250
10.760
A
O6
DG
1
ATOM
A
O6
DG
1
1
1.00
1
O
0.00
5.340
-0.390
9.950
A
N1
DG
1
ATOM
A
N1
DG
1
1
1.00
1
N
0.00
6.520
0.280
9.620
A
C2
DG
1
ATOM
A
C2
DG
1
1
1.00
1
C
0.00
7.590
-0.400
9.240
A
N2
DG
1
ATOM
A
N2
DG
1
1
1.00
1
N
0.00
6.600
1.600
9.760
A
N3
DG
1
ATOM
A
N3
DG
1
1
1.00
1
N
0.00
5.560
2.310
10.220
A
C4
DG
1
ATOM
A
C4
DG
1
1
1.00
1
C
0.90
6.660
6.690
13.870
A
H5'
DG
1
ATOM
A
H5'
DG
1
1
1.00
1
H
0.90
7.070
8.120
12.950
A
H5''
DG
1
ATOM
A
H5''
DG
1
1
1.00
1
H
0.90
8.370
6.210
12.170
A
H4'
DG
1
ATOM
A
H4'
DG
1
1
1.00
1
H
0.95
6.730
7.790
10.460
A
H3'
DG
1
ATOM
A
H3'
DG
1
1
1.00
1
H
0.81
5.310
6.080
9.750
A
H2'
DG
1
ATOM
A
H2'
DG
1
1
1.00
1
H
0.81
6.660
5.670
8.720
A
H2''
DG
1
ATOM
A
H2''
DG
1
1
1.00
1
H
0.95
7.480
4.020
10.230
A
H1'
DG
1
ATOM
A
H1'
DG
1
1
1.00
1
H
0.95
3.800
4.740
11.310
A
H8
DG
1
ATOM
A
H8
DG
1
1
1.00
1
H
0.00
5.290
-1.350
9.880
A
H1
DG
1
ATOM
A
H1
DG
1
1
1.00
1
H
0.00
7.540
-1.360
9.140
A
H21
DG
1
ATOM
A
H21
DG
1
1
1.00
1
H
0.00
8.410
0.060
9.060
A
H22
DG
1
ATOM
A
H22
DG
1
1
1.00
1
H
0.00
4.770
7.840
13.220
A
HO5'
DG
1
ATOM
A
HO5'
DG
1
1
1.00
1
H
0.00
8.810
7.550
8.440
A
P
DT
2
ATOM
A
P
DT
1
2
1.00
1
P
0.00
10.190
8.070
8.390
A
OP1
DT
2
ATOM
A
OP1
DT
1
2
1.00
1
O
0.00
7.690
8.440
8.040
A
OP2
DT
2
ATOM
A
OP2
DT
1
2
1.00
1
O
0.00
8.710
6.190
7.580
A
O5'
DT
2
ATOM
A
O5'
DT
1
2
1.00
1
O
0.00
9.690
5.160
7.750
A
C5'
DT
2
ATOM
A
C5'
DT
1
2
1.00
1
C
0.00
9.360
3.950
6.910
A
C4'
DT
2
ATOM
A
C4'
DT
1
2
1.00
1
C
0.00
8.150
3.290
7.340
A
O4'
DT
2
ATOM
A
O4'
DT
1
2
1.00
1
O
0.00
9.170
4.350
5.460
A
C3'
DT
2
ATOM
A
C3'
DT
1
2
1.00
1
C
0.00
10.250
3.810
4.690
A
O3'
DT
2
ATOM
A
O3'
DT
1
2
1.00
1
O
0.00
7.820
3.780
5.080
A
C2'
DT
2
ATOM
A
C2'
DT
1
2
1.00
1
C
0.00
7.570
2.740
6.150
A
C1'
DT
2
ATOM
A
C1'
DT
1
2
1.00
1
C
0.00
6.130
2.460
6.380
A
N1
DT
2
ATOM
A
N1
DT
1
2
1.00
1
N
0.00
5.680
1.130
6.430
A
C2
DT
2
ATOM
A
C2
DT
1
2
1.00
1
C
0.00
6.360
0.210
5.990
A
O2
DT
2
ATOM
A
O2
DT
1
2
1.00
1
O
0.00
4.400
0.850
6.880
A
N3
DT
2
ATOM
A
N3
DT
1
2
1.00
1
N
0.00
3.530
1.870
7.270
A
C4
DT
2
ATOM
A
C4
DT
1
2
1.00
1
C
0.00
2.420
1.560
7.710
A
O4
DT
2
ATOM
A
O4
DT
1
2
1.00
1
O
0.00
3.950
3.190
7.190
A
C5
DT
2
ATOM
A
C5
DT
1
2
1.00
1
C
0.00
3.020
4.360
7.530
A
C7
DT
2
ATOM
A
C7
DT
1
2
1.00
1
C
0.00
5.240
3.480
6.750
A
C6
DT
2
ATOM
A
C6
DT
1
2
1.00
1
C
1.00
9.740
4.870
8.790
A
H5'
DT
2
ATOM
A
H5'
DT
1
2
1.00
1
H
1.00
10.660
5.540
7.450
A
H5''
DT
2
ATOM
A
H5''
DT
1
2
1.00
1
H
1.00
10.180
3.250
6.970
A
H4'
DT
2
ATOM
A
H4'
DT
1
2
1.00
1
H
1.00
9.160
5.420
5.340
A
H3'
DT
2
ATOM
A
H3'
DT
1
2
1.00
1
H
0.85
7.030
4.520
5.120
A
H2'
DT
2
ATOM
A
H2'
DT
1
2
1.00
1
H
0.85
7.820
3.310
4.110
A
H2''
DT
2
ATOM
A
H2''
DT
1
2
1.00
1
H
1.00
8.040
1.800
5.890
A
H1'
DT
2
ATOM
A
H1'
DT
1
2
1.00
1
H
0.00
4.100
-0.060
6.930
A
H3
DT
2
ATOM
A
H3
DT
1
2
1.00
1
H
0.65
2.150
4.280
6.890
A
H71
DT
2
ATOM
A
H71
DT
1
2
1.00
1
H
0.65
2.750
4.270
8.570
A
H72
DT
2
ATOM
A
H72
DT
1
2
1.00
1
H
0.65
3.570
5.270
7.340
A
H73
DT
2
ATOM
A
H73
DT
1
2
1.00
1
H
1.00
5.540
4.510
6.640
A
H6
DT
2
ATOM
A
H6
DT
1
2
1.00
1
H
0.00
10.630
4.330
3.210
A
P
DA
3
ATOM
A
P
DA
1
3
1.00
1
P
0.00
12.100
4.480
3.140
A
OP1
DA
3
ATOM
A
OP1
DA
1
3
1.00
1
O
0.00
9.780
5.490
2.850
A
OP2
DA
3
ATOM
A
OP2
DA
1
3
1.00
1
O
0.00
10.170
3.070
2.330
A
O5'
DA
3
ATOM
A
O5'
DA
1
3
1.00
1
O
0.00
10.880
1.830
2.430
A
C5'
DA
3
ATOM
A
C5'
DA
1
3
1.00
1
C
0.00
10.100
0.720
1.760
A
C4'
DA
3
ATOM
A
C4'
DA
1
3
1.00
1
C
0.00
8.830
0.590
2.420
A
O4'
DA
3
ATOM
A
O4'
DA
1
3
1.00
1
O
0.00
9.840
1.030
0.290
A
C3'
DA
3
ATOM
A
C3'
DA
1
3
1.00
1
C
0.00
10.360
-0.030
-0.520
A
O3'
DA
3
ATOM
A
O3'
DA
1
3
1.00
1
O
0.00
8.340
1.210
0.210
A
C2'
DA
3
ATOM
A
C2'
DA
1
3
1.00
1
C
0.00
7.830
0.430
1.400
A
C1'
DA
3
ATOM
A
C1'
DA
1
3
1.00
1
C
0.00
6.550
0.950
1.940
A
N9
DA
3
ATOM
A
N9
DA
1
3
1.00
1
N
0.00
6.230
2.220
2.200
A
C8
DA
3
ATOM
A
C8
DA
1
3
1.00
1
C
0.00
5.090
2.280
2.880
A
N7
DA
3
ATOM
A
N7
DA
1
3
1.00
1
N
0.00
4.660
1.040
3.030
A
C5
DA
3
ATOM
A
C5
DA
1
3
1.00
1
C
0.00
3.530
0.490
3.620
A
C6
DA
3
ATOM
A
C6
DA
1
3
1.00
1
C
0.00
2.630
1.280
4.200
A
N6
DA
3
ATOM
A
N6
DA
1
3
1.00
1
N
0.00
3.360
-0.830
3.580
A
N1
DA
3
ATOM
A
N1
DA
1
3
1.00
1
N
0.00
4.260
-1.610
3.000
A
C2
DA
3
ATOM
A
C2
DA
1
3
1.00
1
C
0.00
5.350
-1.130
2.430
A
N3
DA
3
ATOM
A
N3
DA
1
3
1.00
1
N
0.00
5.570
0.190
2.430
A
C4
DA
3
ATOM
A
C4
DA
1
3
1.00
1
C
1.00
11.030
1.580
3.470
A
H5'
DA
3
ATOM
A
H5'
DA
1
3
1.00
1
H
1.00
11.850
1.920
1.950
A
H5''
DA
3
ATOM
A
H5''
DA
1
3
1.00
1
H
1.00
10.640
-0.210
1.830
A
H4'
DA
3
ATOM
A
H4'
DA
1
3
1.00
1
H
1.00
10.300
1.960
0.000
A
H3'
DA
3
ATOM
A
H3'
DA
1
3
1.00
1
H
0.85
8.040
2.240
0.290
A
H2'
DA
3
ATOM
A
H2'
DA
1
3
1.00
1
H
0.85
7.920
0.770
-0.680
A
H2''
DA
3
ATOM
A
H2''
DA
1
3
1.00
1
H
1.00
7.720
-0.620
1.140
A
H1'
DA
3
ATOM
A
H1'
DA
1
3
1.00
1
H
1.00
6.760
3.070
1.810
A
H8
DA
3
ATOM
A
H8
DA
1
3
1.00
1
H
0.00
1.840
0.890
4.600
A
H61
DA
3
ATOM
A
H61
DA
1
3
1.00
1
H
0.00
2.760
2.230
4.220
A
H62
DA
3
ATOM
A
H62
DA
1
3
1.00
1
H
1.00
4.100
-2.670
2.990
A
H2
DA
3
ATOM
A
H2
DA
1
3
1.00
1
H
0.00
10.170
-0.150
-2.120
A
P
DC
4
ATOM
A
P
DC
1
4
1.00
1
P
0.00
11.400
-0.770
-2.690
A
OP1
DC
4
ATOM
A
OP1
DC
1
4
1.00
1
O
0.00
9.700
1.130
-2.680
A
OP2
DC
4
ATOM
A
OP2
DC
1
4
1.00
1
O
0.00
8.970
-1.210
-2.180
A
O5'
DC
4
ATOM
A
O5'
DC
1
4
1.00
1
O
0.00
9.140
-2.520
-1.610
A
C5'
DC
4
ATOM
A
C5'
DC
1
4
1.00
1
C
0.00
7.830
-3.270
-1.520
A
C4'
DC
4
ATOM
A
C4'
DC
1
4
1.00
1
C
0.00
6.870
-2.440
-0.820
A
O4'
DC
4
ATOM
A
O4'
DC
1
4
1.00
1
O
0.00
7.250
-3.550
-2.900
A
C3'
DC
4
ATOM
A
C3'
DC
1
4
1.00
1
C
0.00
6.900
-4.950
-2.970
A
O3'
DC
4
ATOM
A
O3'
DC
1
4
1.00
1
O
0.00
6.060
-2.620
-3.000
A
C2'
DC
4
ATOM
A
C2'
DC
1
4
1.00
1
C
0.00
5.640
-2.530
-1.550
A
C1'
DC
4
ATOM
A
C1'
DC
1
4
1.00
1
C
0.00
4.800
-1.340
-1.240
A
N1
DC
4
ATOM
A
N1
DC
1
4
1.00
1
N
0.00
3.640
-1.490
-0.470
A
C2
DC
4
ATOM
A
C2
DC
1
4
1.00
1
C
0.00
3.180
-2.610
-0.240
A
O2
DC
4
ATOM
A
O2
DC
1
4
1.00
1
O
0.00
2.970
-0.420
-0.040
A
N3
DC
4
ATOM
A
N3
DC
1
4
1.00
1
N
0.00
3.370
0.830
-0.320
A
C4
DC
4
ATOM
A
C4
DC
1
4
1.00
1
C
0.00
2.730
1.850
0.240
A
N4
DC
4
ATOM
A
N4
DC
1
4
1.00
1
N
0.00
4.500
1.050
-1.100
A
C5
DC
4
ATOM
A
C5
DC
1
4
1.00
1
C
0.00
5.220
-0.040
-1.570
A
C6
DC
4
ATOM
A
C6
DC
1
4
1.00
1
C
1.00
9.560
-2.410
-0.610
A
H5'
DC
4
ATOM
A
H5'
DC
1
4
1.00
1
H
1.00
9.830
-3.080
-2.210
A
H5''
DC
4
ATOM
A
H5''
DC
1
4
1.00
1
H
1.00
7.960
-4.200
-0.990
A
H4'
DC
4
ATOM
A
H4'
DC
1
4
1.00
1
H
1.00
7.950
-3.320
-3.690
A
H3'
DC
4
ATOM
A
H3'
DC
1
4
1.00
1
H
0.85
6.320
-1.640
-3.370
A
H2'
DC
4
ATOM
A
H2'
DC
1
4
1.00
1
H
0.85
5.250
-3.040
-3.580
A
H2''
DC
4
ATOM
A
H2''
DC
1
4
1.00
1
H
1.00
5.100
-3.420
-1.250
A
H1'
DC
4
ATOM
A
H1'
DC
1
4
1.00
1
H
0.00
1.990
1.690
0.820
A
H41
DC
4
ATOM
A
H41
DC
1
4
1.00
1
H
0.00
3.010
2.750
0.060
A
H42
DC
4
ATOM
A
H42
DC
1
4
1.00
1
H
1.00
4.860
2.050
-1.260
A
H5
DC
4
ATOM
A
H5
DC
1
4
1.00
1
H
1.00
6.160
0.100
-2.080
A
H6
DC
4
ATOM
A
H6
DC
1
4
1.00
1
H
0.00
6.170
-5.650
-4.230
A
P
DG
5
ATOM
A
P
DG
1
5
1.00
1
P
0.00
6.610
-7.060
-4.300
A
OP1
DG
5
ATOM
A
OP1
DG
1
5
1.00
1
O
0.00
6.310
-4.790
-5.430
A
OP2
DG
5
ATOM
A
OP2
DG
1
5
1.00
1
O
0.00
4.630
-5.590
-3.740
A
O5'
DG
5
ATOM
A
O5'
DG
1
5
1.00
1
O
0.00
4.200
-6.400
-2.640
A
C5'
DG
5
ATOM
A
C5'
DG
1
5
1.00
1
C
0.00
2.690
-6.390
-2.490
A
C4'
DG
5
ATOM
A
C4'
DG
1
5
1.00
1
C
0.00
2.240
-5.070
-2.130
A
O4'
DG
5
ATOM
A
O4'
DG
1
5
1.00
1
O
0.00
2.000
-6.770
-3.790
A
C3'
DG
5
ATOM
A
C3'
DG
1
5
1.00
1
C
0.00
1.050
-7.820
-3.530
A
O3'
DG
5
ATOM
A
O3'
DG
1
5
1.00
1
O
0.00
1.380
-5.480
-4.280
A
C2'
DG
5
ATOM
A
C2'
DG
1
5
1.00
1
C
0.00
1.130
-4.750
-2.980
A
C1'
DG
5
ATOM
A
C1'
DG
1
5
1.00
1
C
0.00
1.110
-3.270
-3.140
A
N9
DG
5
ATOM
A
N9
DG
1
5
1.00
1
N
0.00
2.110
-2.510
-3.590
A
C8
DG
5
ATOM
A
C8
DG
1
5
1.00
1
C
0.00
1.900
-1.240
-3.260
A
N7
DG
5
ATOM
A
N7
DG
1
5
1.00
1
N
0.00
0.740
-1.180
-2.610
A
C5
DG
5
ATOM
A
C5
DG
1
5
1.00
1
C
0.00
0.000
-0.140
-2.080
A
C6
DG
5
ATOM
A
C6
DG
1
5
1.00
1
C
0.00
0.470
1.000
-2.040
A
O6
DG
5
ATOM
A
O6
DG
1
5
1.00
1
O
0.00
-1.240
-0.410
-1.530
A
N1
DG
5
ATOM
A
N1
DG
1
5
1.00
1
N
0.00
-1.720
-1.720
-1.520
A
C2
DG
5
ATOM
A
C2
DG
1
5
1.00
1
C
0.00
-2.930
-1.980
-1.050
A
N2
DG
5
ATOM
A
N2
DG
1
5
1.00
1
N
0.00
-0.980
-2.720
-2.010
A
N3
DG
5
ATOM
A
N3
DG
1
5
1.00
1
N
0.00
0.230
-2.470
-2.550
A
C4
DG
5
ATOM
A
C4
DG
1
5
1.00
1
C
1.00
4.640
-6.020
-1.730
A
H5'
DG
5
ATOM
A
H5'
DG
1
5
1.00
1
H
1.00
4.530
-7.420
-2.790
A
H5''
DG
5
ATOM
A
H5''
DG
1
5
1.00
1
H
1.00
2.390
-7.090
-1.730
A
H4'
DG
5
ATOM
A
H4'
DG
1
5
1.00
1
H
1.00
2.710
-7.120
-4.530
A
H3'
DG
5
ATOM
A
H3'
DG
1
5
1.00
1
H
0.85
2.040
-4.900
-4.910
A
H2'
DG
5
ATOM
A
H2'
DG
1
5
1.00
1
H
0.85
0.440
-5.620
-4.790
A
H2''
DG
5
ATOM
A
H2''
DG
1
5
1.00
1
H
1.00
0.200
-5.060
-2.530
A
H1'
DG
5
ATOM
A
H1'
DG
1
5
1.00
1
H
1.00
2.830
-2.830
-4.320
A
H8
DG
5
ATOM
A
H8
DG
1
5
1.00
1
H
0.00
-1.760
0.290
-1.140
A
H1
DG
5
ATOM
A
H1
DG
1
5
1.00
1
H
0.00
-3.470
-1.280
-0.680
A
H21
DG
5
ATOM
A
H21
DG
1
5
1.00
1
H
0.00
-3.270
-2.880
-1.070
A
H22
DG
5
ATOM
A
H22
DG
1
5
1.00
1
H
0.00
0.160
-8.510
-4.680
A
P
DT
6
ATOM
A
P
DT
1
6
1.00
1
P
0.00
-0.320
-9.820
-4.190
A
OP1
DT
6
ATOM
A
OP1
DT
1
6
1.00
1
O
0.00
0.890
-8.450
-5.970
A
OP2
DT
6
ATOM
A
OP2
DT
1
6
1.00
1
O
0.00
-1.070
-7.480
-4.750
A
O5'
DT
6
ATOM
A
O5'
DT
1
6
1.00
1
O
0.00
-2.000
-7.380
-3.660
A
C5'
DT
6
ATOM
A
C5'
DT
1
6
1.00
1
C
0.00
-2.980
-6.250
-3.890
A
C4'
DT
6
ATOM
A
C4'
DT
1
6
1.00
1
C
0.00
-2.360
-4.950
-3.840
A
O4'
DT
6
ATOM
A
O4'
DT
1
6
1.00
1
O
0.00
-3.630
-6.370
-5.260
A
C3'
DT
6
ATOM
A
C3'
DT
1
6
1.00
1
C
0.00
-4.940
-6.950
-5.110
A
O3'
DT
6
ATOM
A
O3'
DT
1
6
1.00
1
O
0.00
-3.660
-4.950
-5.790
A
C2'
DT
6
ATOM
A
C2'
DT
1
6
1.00
1
C
0.00
-3.240
-4.110
-4.610
A
C1'
DT
6
ATOM
A
C1'
DT
1
6
1.00
1
C
0.00
-2.540
-2.870
-5.040
A
N1
DT
6
ATOM
A
N1
DT
1
6
1.00
1
N
0.00
-2.990
-1.620
-4.570
A
C2
DT
6
ATOM
A
C2
DT
1
6
1.00
1
C
0.00
-4.120
-1.470
-4.110
A
O2
DT
6
ATOM
A
O2
DT
1
6
1.00
1
O
0.00
-2.200
-0.490
-4.780
A
N3
DT
6
ATOM
A
N3
DT
1
6
1.00
1
N
0.00
-0.990
-0.580
-5.460
A
C4
DT
6
ATOM
A
C4
DT
1
6
1.00
1
C
0.00
-0.280
0.430
-5.540
A
O4
DT
6
ATOM
A
O4
DT
1
6
1.00
1
O
0.00
-0.570
-1.800
-5.980
A
C5
DT
6
ATOM
A
C5
DT
1
6
1.00
1
C
0.00
0.660
-1.930
-6.870
A
C7
DT
6
ATOM
A
C7
DT
1
6
1.00
1
C
0.00
-1.340
-2.930
-5.750
A
C6
DT
6
ATOM
A
C6
DT
1
6
1.00
1
C
1.00
-1.460
-7.210
-2.740
A
H5'
DT
6
ATOM
A
H5'
DT
1
6
1.00
1
H
1.00
-2.550
-8.310
-3.570
A
H5''
DT
6
ATOM
A
H5''
DT
1
6
1.00
1
H
1.00
-3.750
-6.280
-3.140
A
H4'
DT
6
ATOM
A
H4'
DT
1
6
1.00
1
H
1.00
-3.060
-7.010
-5.910
A
H3'
DT
6
ATOM
A
H3'
DT
1
6
1.00
1
H
0.85
-2.970
-4.780
-6.600
A
H2'
DT
6
ATOM
A
H2'
DT
1
6
1.00
1
H
0.85
-4.660
-4.640
-6.070
A
H2''
DT
6
ATOM
A
H2''
DT
1
6
1.00
1
H
1.00
-4.100
-3.830
-4.020
A
H1'
DT
6
ATOM
A
H1'
DT
1
6
1.00
1
H
0.00
-2.490
0.350
-4.430
A
H3
DT
6
ATOM
A
H3
DT
1
6
1.00
1
H
0.65
0.560
-1.220
-7.680
A
H71
DT
6
ATOM
A
H71
DT
1
6
1.00
1
H
0.65
1.530
-1.720
-6.270
A
H72
DT
6
ATOM
A
H72
DT
1
6
1.00
1
H
0.65
0.680
-2.950
-7.240
A
H73
DT
6
ATOM
A
H73
DT
1
6
1.00
1
H
1.00
-1.020
-3.870
-6.180
A
H6
DT
6
ATOM
A
H6
DT
1
6
1.00
1
H
0.00
-5.890
-7.330
-6.360
A
P
DA
7
ATOM
A
P
DA
1
7
1.00
1
P
0.00
-6.730
-8.490
-5.990
A
OP1
DA
7
ATOM
A
OP1
DA
1
7
1.00
1
O
0.00
-5.070
-7.410
-7.600
A
OP2
DA
7
ATOM
A
OP2
DA
1
7
1.00
1
O
0.00
-6.800
-6.010
-6.450
A
O5'
DA
7
ATOM
A
O5'
DA
1
7
1.00
1
O
0.00
-7.650
-5.670
-5.340
A
C5'
DA
7
ATOM
A
C5'
DA
1
7
1.00
1
C
0.00
-8.110
-4.230
-5.420
A
C4'
DA
7
ATOM
A
C4'
DA
1
7
1.00
1
C
0.00
-6.960
-3.370
-5.560
A
O4'
DA
7
ATOM
A
O4'
DA
1
7
1.00
1
O
0.00
-9.010
-4.010
-6.620
A
C3'
DA
7
ATOM
A
C3'
DA
1
7
1.00
1
C
0.00
-10.280
-3.500
-6.170
A
O3'
DA
7
ATOM
A
O3'
DA
1
7
1.00
1
O
0.00
-8.250
-3.040
-7.490
A
C2'
DA
7
ATOM
A
C2'
DA
1
7
1.00
1
C
0.00
-7.310
-2.360
-6.520
A
C1'
DA
7
ATOM
A
C1'
DA
1
7
1.00
1
C
0.00
-6.070
-1.890
-7.180
A
N9
DA
7
ATOM
A
N9
DA
1
7
1.00
1
N
0.00
-5.230
-2.600
-7.940
A
C8
DA
7
ATOM
A
C8
DA
1
7
1.00
1
C
0.00
-4.140
-1.890
-8.210
A
N7
DA
7
ATOM
A
N7
DA
1
7
1.00
1
N
0.00
-4.300
-0.700
-7.640
A
C5
DA
7
ATOM
A
C5
DA
1
7
1.00
1
C
0.00
-3.530
0.450
-7.610
A
C6
DA
7
ATOM
A
C6
DA
1
7
1.00
1
C
0.00
-2.320
0.480
-8.160
A
N6
DA
7
ATOM
A
N6
DA
1
7
1.00
1
N
0.00
-4.000
1.520
-6.960
A
N1
DA
7
ATOM
A
N1
DA
1
7
1.00
1
N
0.00
-5.170
1.480
-6.350
A
C2
DA
7
ATOM
A
C2
DA
1
7
1.00
1
C
0.00
-5.940
0.410
-6.360
A
N3
DA
7
ATOM
A
N3
DA
1
7
1.00
1
N
0.00
-5.520
-0.700
-7.000
A
C4
DA
7
ATOM
A
C4
DA
1
7
1.00
1
C
1.00
-7.110
-5.830
-4.410
A
H5'
DA
7
ATOM
A
H5'
DA
1
7
1.00
1
H
1.00
-8.520
-6.310
-5.350
A
H5''
DA
7
ATOM
A
H5''
DA
1
7
1.00
1
H
1.00
-8.650
-3.960
-4.520
A
H4'
DA
7
ATOM
A
H4'
DA
1
7
1.00
1
H
1.00
-9.150
-4.920
-7.180
A
H3'
DA
7
ATOM
A
H3'
DA
1
7
1.00
1
H
0.85
-7.670
-3.550
-8.250
A
H2'
DA
7
ATOM
A
H2'
DA
1
7
1.00
1
H
0.85
-8.890
-2.290
-7.920
A
H2''
DA
7
ATOM
A
H2''
DA
1
7
1.00
1
H
1.00
-7.800
-1.530
-6.050
A
H1'
DA
7
ATOM
A
H1'
DA
1
7
1.00
1
H
1.00
-5.480
-3.560
-8.370
A
H8
DA
7
ATOM
A
H8
DA
1
7
1.00
1
H
0.00
-1.790
1.280
-8.120
A
H61
DA
7
ATOM
A
H61
DA
1
7
1.00
1
H
0.00
-1.980
-0.300
-8.600
A
H62
DA
7
ATOM
A
H62
DA
1
7
1.00
1
H
1.00
-5.520
2.360
-5.830
A
H2
DA
7
ATOM
A
H2
DA
1
7
1.00
1
H
0.00
-11.560
-3.360
-7.150
A
P
DC
8
ATOM
A
P
DC
1
8
1.00
1
P
0.00
-12.780
-3.480
-6.320
A
OP1
DC
8
ATOM
A
OP1
DC
1
8
1.00
1
O
0.00
-11.400
-4.260
-8.310
A
OP2
DC
8
ATOM
A
OP2
DC
1
8
1.00
1
O
0.00
-11.390
-1.850
-7.660
A
O5'
DC
8
ATOM
A
O5'
DC
1
8
1.00
1
O
0.00
-11.670
-0.740
-6.800
A
C5'
DC
8
ATOM
A
C5'
DC
1
8
1.00
1
C
0.00
-11.080
0.540
-7.380
A
C4'
DC
8
ATOM
A
C4'
DC
1
8
1.00
1
C
0.00
-9.660
0.430
-7.520
A
O4'
DC
8
ATOM
A
O4'
DC
1
8
1.00
1
O
0.00
-11.600
0.840
-8.760
A
C3'
DC
8
ATOM
A
C3'
DC
1
8
1.00
1
C
0.00
-12.770
1.670
-8.720
A
O3'
DC
8
ATOM
A
O3'
DC
1
8
1.00
1
O
0.00
-10.500
1.690
-9.360
A
C2'
DC
8
ATOM
A
C2'
DC
1
8
1.00
1
C
0.00
-9.300
1.460
-8.450
A
C1'
DC
8
ATOM
A
C1'
DC
1
8
1.00
1
C
0.00
-8.090
1.060
-9.210
A
N1
DC
8
ATOM
A
N1
DC
1
8
1.00
1
N
0.00
-6.990
1.920
-9.270
A
C2
DC
8
ATOM
A
C2
DC
1
8
1.00
1
C
0.00
-7.010
3.020
-8.720
A
O2
DC
8
ATOM
A
O2
DC
1
8
1.00
1
O
0.00
-5.890
1.560
-9.940
A
N3
DC
8
ATOM
A
N3
DC
1
8
1.00
1
N
0.00
-5.790
0.380
-10.560
A
C4
DC
8
ATOM
A
C4
DC
1
8
1.00
1
C
0.00
-4.650
0.060
-11.170
A
N4
DC
8
ATOM
A
N4
DC
1
8
1.00
1
N
0.00
-6.850
-0.510
-10.550
A
C5
DC
8
ATOM
A
C5
DC
1
8
1.00
1
C
0.00
-8.010
-0.170
-9.870
A
C6
DC
8
ATOM
A
C6
DC
1
8
1.00
1
C
0.95
-11.240
-0.910
-5.820
A
H5'
DC
8
ATOM
A
H5'
DC
1
8
1.00
1
H
0.95
-12.740
-0.620
-6.690
A
H5''
DC
8
ATOM
A
H5''
DC
1
8
1.00
1
H
0.95
-11.310
1.370
-6.740
A
H4'
DC
8
ATOM
A
H4'
DC
1
8
1.00
1
H
0.90
-11.770
-0.050
-9.350
A
H3'
DC
8
ATOM
A
H3'
DC
1
8
1.00
1
H
0.00
-13.280
1.460
-7.930
A
HO3'
DC
8
ATOM
A
HO3'
DC
1
8
1.00
1
H
0.77
-10.250
1.390
-10.370
A
H2'
DC
8
ATOM
A
H2'
DC
1
8
1.00
1
H
0.77
-10.760
2.740
-9.360
A
H2''
DC
8
ATOM
A
H2''
DC
1
8
1.00
1
H
0.90
-9.080
2.360
-7.890
A
H1'
DC
8
ATOM
A
H1'
DC
1
8
1.00
1
H
0.00
-3.920
0.680
-11.160
A
H41
DC
8
ATOM
A
H41
DC
1
8
1.00
1
H
0.00
-4.560
-0.790
-11.610
A
H42
DC
8
ATOM
A
H42
DC
1
8
1.00
1
H
1.00
-6.770
-1.480
-11.020
A
H5
DC
8
ATOM
A
H5
DC
1
8
1.00
1
H
0.95
-8.840
-0.860
-9.860
A
H6
DC
8
ATOM
A
H6
DC
1
8
1.00
1
H
0.00
2.260
8.520
-12.440
B
O5'
DG
9
ATOM
B
O5'
DG
1
1
1.00
1
O
0.00
1.240
9.450
-12.810
B
C5'
DG
9
ATOM
B
C5'
DG
1
1
1.00
1
C
0.00
0.100
9.450
-11.800
B
C4'
DG
9
ATOM
B
C4'
DG
1
1
1.00
1
C
0.00
-0.530
8.150
-11.810
B
O4'
DG
9
ATOM
B
O4'
DG
1
1
1.00
1
O
0.00
0.580
9.710
-10.380
B
C3'
DG
9
ATOM
B
C3'
DG
1
1
1.00
1
C
0.00
-0.140
10.830
-9.840
B
O3'
DG
9
ATOM
B
O3'
DG
1
1
1.00
1
O
0.00
0.310
8.410
-9.640
B
C2'
DG
9
ATOM
B
C2'
DG
1
1
1.00
1
C
0.00
-0.820
7.800
-10.450
B
C1'
DG
9
ATOM
B
C1'
DG
1
1
1.00
1
C
0.00
-0.880
6.320
-10.360
B
N9
DG
9
ATOM
B
N9
DG
1
1
1.00
1
N
0.00
0.010
5.450
-10.840
B
C8
DG
9
ATOM
B
C8
DG
1
1
1.00
1
C
0.00
-0.510
4.230
-10.870
B
N7
DG
9
ATOM
B
N7
DG
1
1
1.00
1
N
0.00
-1.750
4.310
-10.410
B
C5
DG
9
ATOM
B
C5
DG
1
1
1.00
1
C
0.00
-2.760
3.380
-10.260
B
C6
DG
9
ATOM
B
C6
DG
1
1
1.00
1
C
0.00
-2.620
2.230
-10.670
B
O6
DG
9
ATOM
B
O6
DG
1
1
1.00
1
O
0.00
-3.980
3.800
-9.750
B
N1
DG
9
ATOM
B
N1
DG
1
1
1.00
1
N
0.00
-4.160
5.150
-9.410
B
C2
DG
9
ATOM
B
C2
DG
1
1
1.00
1
C
0.00
-5.330
5.560
-8.940
B
N2
DG
9
ATOM
B
N2
DG
1
1
1.00
1
N
0.00
-3.170
6.020
-9.580
B
N3
DG
9
ATOM
B
N3
DG
1
1
1.00
1
N
0.00
-1.980
5.640
-10.070
B
C4
DG
9
ATOM
B
C4
DG
1
1
1.00
1
C
0.90
0.840
9.180
-13.780
B
H5'
DG
9
ATOM
B
H5'
DG
1
1
1.00
1
H
0.90
1.650
10.450
-12.870
B
H5''
DG
9
ATOM
B
H5''
DG
1
1
1.00
1
H
0.90
-0.630
10.200
-12.080
B
H4'
DG
9
ATOM
B
H4'
DG
1
1
1.00
1
H
0.95
1.630
9.920
-10.350
B
H3'
DG
9
ATOM
B
H3'
DG
1
1
1.00
1
H
0.81
1.170
7.750
-9.630
B
H2'
DG
9
ATOM
B
H2'
DG
1
1
1.00
1
H
0.81
0.000
8.570
-8.620
B
H2''
DG
9
ATOM
B
H2''
DG
1
1
1.00
1
H
0.95
-1.790
8.200
-10.170
B
H1'
DG
9
ATOM
B
H1'
DG
1
1
1.00
1
H
0.95
1.000
5.700
-11.200
B
H8
DG
9
ATOM
B
H8
DG
1
1
1.00
1
H
0.00
-4.710
3.180
-9.670
B
H1
DG
9
ATOM
B
H1
DG
1
1
1.00
1
H
0.00
-6.050
4.930
-8.820
B
H21
DG
9
ATOM
B
H21
DG
1
1
1.00
1
H
0.00
-5.450
6.480
-8.700
B
H22
DG
9
ATOM
B
H22
DG
1
1
1.00
1
H
0.00
1.870
7.780
-11.970
B
HO5'
DG
9
ATOM
B
HO5'
DG
1
1
1.00
1
H
0.00
0.130
11.420
-8.360
B
P
DT
10
ATOM
B
P
DT
1
2
1.00
1
P
0.00
-0.320
12.830
-8.330
B
OP1
DT
10
ATOM
B
OP1
DT
1
2
1.00
1
O
0.00
1.510
11.090
-7.950
B
OP2
DT
10
ATOM
B
OP2
DT
1
2
1.00
1
O
0.00
-0.890
10.510
-7.500
B
O5'
DT
10
ATOM
B
O5'
DT
1
2
1.00
1
O
0.00
-2.300
10.680
-7.640
B
C5'
DT
10
ATOM
B
C5'
DT
1
2
1.00
1
C
0.00
-3.060
9.690
-6.790
B
C4'
DT
10
ATOM
B
C4'
DT
1
2
1.00
1
C
0.00
-2.840
8.330
-7.210
B
O4'
DT
10
ATOM
B
O4'
DT
1
2
1.00
1
O
0.00
-2.630
9.790
-5.340
B
C3'
DT
10
ATOM
B
C3'
DT
1
2
1.00
1
C
0.00
-3.710
10.320
-4.550
B
O3'
DT
10
ATOM
B
O3'
DT
1
2
1.00
1
O
0.00
-2.250
8.380
-4.950
B
C2'
DT
10
ATOM
B
C2'
DT
1
2
1.00
1
C
0.00
-2.890
7.520
-6.010
B
C1'
DT
10
ATOM
B
C1'
DT
1
2
1.00
1
C
0.00
-2.180
6.240
-6.240
B
N1
DT
10
ATOM
B
N1
DT
1
2
1.00
1
N
0.00
-2.920
5.050
-6.310
B
C2
DT
10
ATOM
B
C2
DT
1
2
1.00
1
C
0.00
-4.050
4.970
-5.830
B
O2
DT
10
ATOM
B
O2
DT
1
2
1.00
1
O
0.00
-2.320
3.890
-6.790
B
N3
DT
10
ATOM
B
N3
DT
1
2
1.00
1
N
0.00
-0.980
3.870
-7.170
B
C4
DT
10
ATOM
B
C4
DT
1
2
1.00
1
C
0.00
-0.530
2.850
-7.690
B
O4
DT
10
ATOM
B
O4
DT
1
2
1.00
1
O
0.00
-0.220
5.040
-7.050
B
C5
DT
10
ATOM
B
C5
DT
1
2
1.00
1
C
0.00
1.290
5.050
-7.290
B
C7
DT
10
ATOM
B
C7
DT
1
2
1.00
1
C
0.00
-0.820
6.200
-6.600
B
C6
DT
10
ATOM
B
C6
DT
1
2
1.00
1
C
1.00
-2.590
10.540
-8.680
B
H5'
DT
10
ATOM
B
H5'
DT
1
2
1.00
1
H
1.00
-2.580
11.680
-7.340
B
H5''
DT
10
ATOM
B
H5''
DT
1
2
1.00
1
H
1.00
-4.120
9.920
-6.860
B
H4'
DT
10
ATOM
B
H4'
DT
1
2
1.00
1
H
1.00
-1.780
10.450
-5.220
B
H3'
DT
10
ATOM
B
H3'
DT
1
2
1.00
1
H
0.85
-1.180
8.220
-4.950
B
H2'
DT
10
ATOM
B
H2'
DT
1
2
1.00
1
H
0.85
-2.650
8.100
-3.980
B
H2''
DT
10
ATOM
B
H2''
DT
1
2
1.00
1
H
1.00
-3.920
7.280
-5.760
B
H1'
DT
10
ATOM
B
H1'
DT
1
2
1.00
1
H
0.00
-2.840
3.080
-6.850
B
H3
DT
10
ATOM
B
H3
DT
1
2
1.00
1
H
0.65
1.720
4.270
-6.680
B
H71
DT
10
ATOM
B
H71
DT
1
2
1.00
1
H
0.65
1.460
4.860
-8.340
B
H72
DT
10
ATOM
B
H72
DT
1
2
1.00
1
H
0.65
1.650
6.020
-6.990
B
H73
DT
10
ATOM
B
H73
DT
1
2
1.00
1
H
1.00
-0.220
7.090
-6.460
B
H6
DT
10
ATOM
B
H6
DT
1
2
1.00
1
H
0.00
-3.520
10.860
-3.040
B
P
DA
11
ATOM
B
P
DA
1
3
1.00
1
P
0.00
-4.300
12.110
-2.890
B
OP1
DA
11
ATOM
B
OP1
DA
1
3
1.00
1
O
0.00
-2.080
10.870
-2.690
B
OP2
DA
11
ATOM
B
OP2
DA
1
3
1.00
1
O
0.00
-4.230
9.680
-2.210
B
O5'
DA
11
ATOM
B
O5'
DA
1
3
1.00
1
O
0.00
-5.650
9.500
-2.290
B
C5'
DA
11
ATOM
B
C5'
DA
1
3
1.00
1
C
0.00
-6.060
8.190
-1.640
B
C4'
DA
11
ATOM
B
C4'
DA
1
3
1.00
1
C
0.00
-5.360
7.120
-2.310
B
O4'
DA
11
ATOM
B
O4'
DA
1
3
1.00
1
O
0.00
-5.700
8.130
-0.170
B
C3'
DA
11
ATOM
B
C3'
DA
1
3
1.00
1
C
0.00
-6.880
7.790
0.590
B
O3'
DA
11
ATOM
B
O3'
DA
1
3
1.00
1
O
0.00
-4.590
7.120
-0.090
B
C2'
DA
11
ATOM
B
C2'
DA
1
3
1.00
1
C
0.00
-4.830
6.250
-1.300
B
C1'
DA
11
ATOM
B
C1'
DA
1
3
1.00
1
C
0.00
-3.580
5.650
-1.840
B
N9
DA
11
ATOM
B
N9
DA
1
3
1.00
1
N
0.00
-2.410
6.250
-2.050
B
C8
DA
11
ATOM
B
C8
DA
1
3
1.00
1
C
0.00
-1.590
5.460
-2.730
B
N7
DA
11
ATOM
B
N7
DA
1
3
1.00
1
N
0.00
-2.240
4.320
-2.940
B
C5
DA
11
ATOM
B
C5
DA
1
3
1.00
1
C
0.00
-1.900
3.130
-3.570
B
C6
DA
11
ATOM
B
C6
DA
1
3
1.00
1
C
0.00
-0.700
2.990
-4.120
B
N6
DA
11
ATOM
B
N6
DA
1
3
1.00
1
N
0.00
-2.790
2.140
-3.600
B
N1
DA
11
ATOM
B
N1
DA
1
3
1.00
1
N
0.00
-3.980
2.290
-3.050
B
C2
DA
11
ATOM
B
C2
DA
1
3
1.00
1
C
0.00
-4.350
3.400
-2.440
B
N3
DA
11
ATOM
B
N3
DA
1
3
1.00
1
N
0.00
-3.500
4.430
-2.370
B
C4
DA
11
ATOM
B
C4
DA
1
3
1.00
1
C
1.00
-5.950
9.500
-3.320
B
H5'
DA
11
ATOM
B
H5'
DA
1
3
1.00
1
H
1.00
-6.140
10.310
-1.780
B
H5''
DA
11
ATOM
B
H5''
DA
1
3
1.00
1
H
1.00
-7.130
8.040
-1.750
B
H4'
DA
11
ATOM
B
H4'
DA
1
3
1.00
1
H
1.00
-5.320
9.080
0.190
B
H3'
DA
11
ATOM
B
H3'
DA
1
3
1.00
1
H
0.85
-3.610
7.580
-0.140
B
H2'
DA
11
ATOM
B
H2'
DA
1
3
1.00
1
H
0.85
-4.660
6.490
0.790
B
H2''
DA
11
ATOM
B
H2''
DA
1
3
1.00
1
H
1.00
-5.530
5.470
-1.060
B
H1'
DA
11
ATOM
B
H1'
DA
1
3
1.00
1
H
1.00
-2.130
7.210
-1.640
B
H8
DA
11
ATOM
B
H8
DA
1
3
1.00
1
H
0.00
-0.470
2.160
-4.560
B
H61
DA
11
ATOM
B
H61
DA
1
3
1.00
1
H
0.00
-0.070
3.710
-4.090
B
H62
DA
11
ATOM
B
H62
DA
1
3
1.00
1
H
1.00
-4.690
1.480
-3.100
B
H2
DA
11
ATOM
B
H2
DA
1
3
1.00
1
H
0.00
-6.890
7.440
2.170
B
P
DC
12
ATOM
B
P
DC
1
4
1.00
1
P
0.00
-8.200
7.860
2.730
B
OP1
DC
12
ATOM
B
OP1
DC
1
4
1.00
1
O
0.00
-5.650
7.920
2.810
B
OP2
DC
12
ATOM
B
OP2
DC
1
4
1.00
1
O
0.00
-6.840
5.830
2.110
B
O5'
DC
12
ATOM
B
O5'
DC
1
4
1.00
1
O
0.00
-7.880
5.110
1.440
B
C5'
DC
12
ATOM
B
C5'
DC
1
4
1.00
1
C
0.00
-7.550
3.630
1.300
B
C4'
DC
12
ATOM
B
C4'
DC
1
4
1.00
1
C
0.00
-6.270
3.500
0.640
B
O4'
DC
12
ATOM
B
O4'
DC
1
4
1.00
1
O
0.00
-7.430
2.950
2.650
B
C3'
DC
12
ATOM
B
C3'
DC
1
4
1.00
1
C
0.00
-8.230
1.750
2.630
B
O3'
DC
12
ATOM
B
O3'
DC
1
4
1.00
1
O
0.00
-5.950
2.690
2.800
B
C2'
DC
12
ATOM
B
C2'
DC
1
4
1.00
1
C
0.00
-5.540
2.490
1.360
B
C1'
DC
12
ATOM
B
C1'
DC
1
4
1.00
1
C
0.00
-4.090
2.660
1.110
B
N1
DC
12
ATOM
B
N1
DC
1
4
1.00
1
N
0.00
-3.400
1.720
0.330
B
C2
DC
12
ATOM
B
C2
DC
1
4
1.00
1
C
0.00
-3.930
0.640
0.040
B
O2
DC
12
ATOM
B
O2
DC
1
4
1.00
1
O
0.00
-2.140
1.950
-0.050
B
N3
DC
12
ATOM
B
N3
DC
1
4
1.00
1
N
0.00
-1.490
3.060
0.290
B
C4
DC
12
ATOM
B
C4
DC
1
4
1.00
1
C
0.00
-0.280
3.280
-0.230
B
N4
DC
12
ATOM
B
N4
DC
1
4
1.00
1
N
0.00
-2.100
4.020
1.080
B
C5
DC
12
ATOM
B
C5
DC
1
4
1.00
1
C
0.00
-3.410
3.820
1.500
B
C6
DC
12
ATOM
B
C6
DC
1
4
1.00
1
C
1.00
-8.030
5.530
0.450
B
H5'
DC
12
ATOM
B
H5'
DC
1
4
1.00
1
H
1.00
-8.800
5.210
2.000
B
H5''
DC
12
ATOM
B
H5''
DC
1
4
1.00
1
H
1.00
-8.300
3.130
0.710
B
H4'
DC
12
ATOM
B
H4'
DC
1
4
1.00
1
H
1.00
-7.760
3.580
3.460
B
H3'
DC
12
ATOM
B
H3'
DC
1
4
1.00
1
H
0.85
-5.410
3.530
3.220
B
H2'
DC
12
ATOM
B
H2'
DC
1
4
1.00
1
H
0.85
-5.730
1.790
3.360
B
H2''
DC
12
ATOM
B
H2''
DC
1
4
1.00
1
H
1.00
-5.840
1.520
1.000
B
H1'
DC
12
ATOM
B
H1'
DC
1
4
1.00
1
H
0.00
0.100
2.640
-0.830
B
H41
DC
12
ATOM
B
H41
DC
1
4
1.00
1
H
0.00
0.200
4.080
-0.010
B
H42
DC
12
ATOM
B
H42
DC
1
4
1.00
1
H
1.00
-1.590
4.960
1.280
B
H5
DC
12
ATOM
B
H5
DC
1
4
1.00
1
H
1.00
-3.940
4.610
2.010
B
H6
DC
12
ATOM
B
H6
DC
1
4
1.00
1
H
0.00
-8.290
0.660
3.820
B
P
DG
13
ATOM
B
P
DG
1
5
1.00
1
P
0.00
-9.640
0.050
3.820
B
OP1
DG
13
ATOM
B
OP1
DG
1
5
1.00
1
O
0.00
-7.790
1.260
5.080
B
OP2
DG
13
ATOM
B
OP2
DG
1
5
1.00
1
O
0.00
-7.210
-0.420
3.310
B
O5'
DG
13
ATOM
B
O5'
DG
1
5
1.00
1
O
0.00
-7.510
-1.240
2.170
B
C5'
DG
13
ATOM
B
C5'
DG
1
5
1.00
1
C
0.00
-6.520
-2.390
2.030
B
C4'
DG
13
ATOM
B
C4'
DG
1
5
1.00
1
C
0.00
-5.210
-1.870
1.730
B
O4'
DG
13
ATOM
B
O4'
DG
1
5
1.00
1
O
0.00
-6.410
-3.200
3.310
B
C3'
DG
13
ATOM
B
C3'
DG
1
5
1.00
1
C
0.00
-6.550
-4.600
2.990
B
O3'
DG
13
ATOM
B
O3'
DG
1
5
1.00
1
O
0.00
-5.060
-2.820
3.880
B
C2'
DG
13
ATOM
B
C2'
DG
1
5
1.00
1
C
0.00
-4.270
-2.500
2.630
B
C1'
DG
13
ATOM
B
C1'
DG
1
5
1.00
1
C
0.00
-3.170
-1.540
2.860
B
N9
DG
13
ATOM
B
N9
DG
1
5
1.00
1
N
0.00
-3.290
-0.300
3.340
B
C8
DG
13
ATOM
B
C8
DG
1
5
1.00
1
C
0.00
-2.190
0.400
3.070
B
N7
DG
13
ATOM
B
N7
DG
1
5
1.00
1
N
0.00
-1.350
-0.410
2.440
B
C5
DG
13
ATOM
B
C5
DG
1
5
1.00
1
C
0.00
-0.060
-0.250
1.960
B
C6
DG
13
ATOM
B
C6
DG
1
5
1.00
1
C
0.00
0.470
0.860
1.970
B
O6
DG
13
ATOM
B
O6
DG
1
5
1.00
1
O
0.00
0.590
-1.340
1.400
B
N1
DG
13
ATOM
B
N1
DG
1
5
1.00
1
N
0.00
-0.070
-2.570
1.330
B
C2
DG
13
ATOM
B
C2
DG
1
5
1.00
1
C
0.00
0.550
-3.630
0.820
B
N2
DG
13
ATOM
B
N2
DG
1
5
1.00
1
N
0.00
-1.320
-2.690
1.780
B
N3
DG
13
ATOM
B
N3
DG
1
5
1.00
1
N
0.00
-1.960
-1.650
2.330
B
C4
DG
13
ATOM
B
C4
DG
1
5
1.00
1
C
1.00
-7.460
-0.640
1.270
B
H5'
DG
13
ATOM
B
H5'
DG
1
5
1.00
1
H
1.00
-8.500
-1.650
2.260
B
H5''
DG
13
ATOM
B
H5''
DG
1
5
1.00
1
H
1.00
-6.830
-3.040
1.230
B
H4'
DG
13
ATOM
B
H4'
DG
1
5
1.00
1
H
1.00
-7.180
-2.930
4.010
B
H3'
DG
13
ATOM
B
H3'
DG
1
5
1.00
1
H
0.85
-5.100
-1.960
4.530
B
H2'
DG
13
ATOM
B
H2'
DG
1
5
1.00
1
H
0.85
-4.580
-3.640
4.400
B
H2''
DG
13
ATOM
B
H2''
DG
1
5
1.00
1
H
1.00
-3.870
-3.400
2.180
B
H1'
DG
13
ATOM
B
H1'
DG
1
5
1.00
1
H
1.00
-4.050
0.010
4.040
B
H8
DG
13
ATOM
B
H8
DG
1
5
1.00
1
H
0.00
1.480
-1.250
1.050
B
H1
DG
13
ATOM
B
H1
DG
1
5
1.00
1
H
0.00
1.450
-3.540
0.490
B
H21
DG
13
ATOM
B
H21
DG
1
5
1.00
1
H
0.00
0.100
-4.470
0.780
B
H22
DG
13
ATOM
B
H22
DG
1
5
1.00
1
H
0.00
-6.540
-5.760
4.110
B
P
DT
14
ATOM
B
P
DT
1
6
1.00
1
P
0.00
-7.160
-6.970
3.540
B
OP1
DT
14
ATOM
B
OP1
DT
1
6
1.00
1
O
0.00
-7.070
-5.220
5.390
B
OP2
DT
14
ATOM
B
OP2
DT
1
6
1.00
1
O
0.00
-4.960
-5.980
4.270
B
O5'
DT
14
ATOM
B
O5'
DT
1
6
1.00
1
O
0.00
-4.190
-6.590
3.220
B
C5'
DT
14
ATOM
B
C5'
DT
1
6
1.00
1
C
0.00
-2.720
-6.570
3.560
B
C4'
DT
14
ATOM
B
C4'
DT
1
6
1.00
1
C
0.00
-2.150
-5.250
3.560
B
O4'
DT
14
ATOM
B
O4'
DT
1
6
1.00
1
O
0.00
-2.470
-7.160
4.940
B
C3'
DT
14
ATOM
B
C3'
DT
1
6
1.00
1
C
0.00
-2.020
-8.520
4.810
B
O3'
DT
14
ATOM
B
O3'
DT
1
6
1.00
1
O
0.00
-1.430
-6.240
5.560
B
C2'
DT
14
ATOM
B
C2'
DT
1
6
1.00
1
C
0.00
-1.000
-5.360
4.420
B
C1'
DT
14
ATOM
B
C1'
DT
1
6
1.00
1
C
0.00
-0.570
-4.010
4.870
B
N1
DT
14
ATOM
B
N1
DT
1
6
1.00
1
N
0.00
0.670
-3.500
4.460
B
C2
DT
14
ATOM
B
C2
DT
1
6
1.00
1
C
0.00
1.550
-4.220
3.990
B
O2
DT
14
ATOM
B
O2
DT
1
6
1.00
1
O
0.00
0.980
-2.160
4.700
B
N3
DT
14
ATOM
B
N3
DT
1
6
1.00
1
N
0.00
0.080
-1.320
5.360
B
C4
DT
14
ATOM
B
C4
DT
1
6
1.00
1
C
0.00
0.350
-0.130
5.450
B
O4
DT
14
ATOM
B
O4
DT
1
6
1.00
1
O
0.00
-1.130
-1.840
5.820
B
C5
DT
14
ATOM
B
C5
DT
1
6
1.00
1
C
0.00
-2.090
-1.020
6.680
B
C7
DT
14
ATOM
B
C7
DT
1
6
1.00
1
C
0.00
-1.450
-3.160
5.560
B
C6
DT
14
ATOM
B
C6
DT
1
6
1.00
1
C
1.00
-4.350
-6.050
2.300
B
H5'
DT
14
ATOM
B
H5'
DT
1
6
1.00
1
H
1.00
-4.510
-7.610
3.090
B
H5''
DT
14
ATOM
B
H5''
DT
1
6
1.00
1
H
1.00
-2.180
-7.160
2.840
B
H4'
DT
14
ATOM
B
H4'
DT
1
6
1.00
1
H
1.00
-3.370
-7.160
5.530
B
H3'
DT
14
ATOM
B
H3'
DT
1
6
1.00
1
H
0.85
-1.830
-5.610
6.350
B
H2'
DT
14
ATOM
B
H2'
DT
1
6
1.00
1
H
0.85
-0.570
-6.770
5.920
B
H2''
DT
14
ATOM
B
H2''
DT
1
6
1.00
1
H
1.00
-0.180
-5.820
3.890
B
H1'
DT
14
ATOM
B
H1'
DT
1
6
1.00
1
H
0.00
1.820
-1.810
4.390
B
H3
DT
14
ATOM
B
H3
DT
1
6
1.00
1
H
0.65
-1.530
-0.640
7.520
B
H71
DT
14
ATOM
B
H71
DT
1
6
1.00
1
H
0.65
-2.480
-0.220
6.070
B
H72
DT
14
ATOM
B
H72
DT
1
6
1.00
1
H
0.65
-2.870
-1.700
7.000
B
H73
DT
14
ATOM
B
H73
DT
1
6
1.00
1
H
1.00
-2.390
-3.550
5.920
B
H6
DT
14
ATOM
B
H6
DT
1
6
1.00
1
H
0.00
-1.770
-9.490
6.070
B
P
DA
15
ATOM
B
P
DA
1
7
1.00
1
P
0.00
-1.960
-10.890
5.630
B
OP1
DA
15
ATOM
B
OP1
DA
1
7
1.00
1
O
0.00
-2.540
-9.000
7.240
B
OP2
DA
15
ATOM
B
OP2
DA
1
7
1.00
1
O
0.00
-0.210
-9.220
6.340
B
O5'
DA
15
ATOM
B
O5'
DA
1
7
1.00
1
O
0.00
0.750
-9.560
5.330
B
C5'
DA
15
ATOM
B
C5'
DA
1
7
1.00
1
C
0.00
2.070
-8.860
5.570
B
C4'
DA
15
ATOM
B
C4'
DA
1
7
1.00
1
C
0.00
1.870
-7.440
5.680
B
O4'
DA
15
ATOM
B
O4'
DA
1
7
1.00
1
O
0.00
2.700
-9.340
6.870
B
C3'
DA
15
ATOM
B
C3'
DA
1
7
1.00
1
C
0.00
3.940
-10.010
6.560
B
O3'
DA
15
ATOM
B
O3'
DA
1
7
1.00
1
O
0.00
2.870
-8.090
7.690
B
C2'
DA
15
ATOM
B
C2'
DA
1
7
1.00
1
C
0.00
2.810
-6.990
6.670
B
C1'
DA
15
ATOM
B
C1'
DA
1
7
1.00
1
C
0.00
2.330
-5.710
7.240
B
N9
DA
15
ATOM
B
N9
DA
1
7
1.00
1
N
0.00
1.210
-5.500
7.940
B
C8
DA
15
ATOM
B
C8
DA
1
7
1.00
1
C
0.00
1.060
-4.210
8.190
B
N7
DA
15
ATOM
B
N7
DA
1
7
1.00
1
N
0.00
2.100
-3.580
7.660
B
C5
DA
15
ATOM
B
C5
DA
1
7
1.00
1
C
0.00
2.510
-2.250
7.630
B
C6
DA
15
ATOM
B
C6
DA
1
7
1.00
1
C
0.00
1.760
-1.300
8.190
B
N6
DA
15
ATOM
B
N6
DA
1
7
1.00
1
N
0.00
3.660
-1.950
7.020
B
N1
DA
15
ATOM
B
N1
DA
1
7
1.00
1
N
0.00
4.390
-2.890
6.460
B
C2
DA
15
ATOM
B
C2
DA
1
7
1.00
1
C
0.00
4.050
-4.160
6.460
B
N3
DA
15
ATOM
B
N3
DA
1
7
1.00
1
N
0.00
2.910
-4.530
7.060
B
C4
DA
15
ATOM
B
C4
DA
1
7
1.00
1
C
1.00
0.370
-9.280
4.360
B
H5'
DA
15
ATOM
B
H5'
DA
1
7
1.00
1
H
1.00
0.920
-10.630
5.340
B
H5''
DA
15
ATOM
B
H5''
DA
1
7
1.00
1
H
1.00
2.750
-9.070
4.760
B
H4'
DA
15
ATOM
B
H4'
DA
1
7
1.00
1
H
1.00
2.050
-10.010
7.400
B
H3'
DA
15
ATOM
B
H3'
DA
1
7
1.00
1
H
0.85
2.080
-7.960
8.410
B
H2'
DA
15
ATOM
B
H2'
DA
1
7
1.00
1
H
0.85
3.840
-8.040
8.170
B
H2''
DA
15
ATOM
B
H2''
DA
1
7
1.00
1
H
1.00
3.790
-6.820
6.230
B
H1'
DA
15
ATOM
B
H1'
DA
1
7
1.00
1
H
1.00
0.600
-6.300
8.350
B
H8
DA
15
ATOM
B
H8
DA
1
7
1.00
1
H
0.00
2.050
-0.390
8.140
B
H61
DA
15
ATOM
B
H61
DA
1
7
1.00
1
H
0.00
0.940
-1.530
8.630
B
H62
DA
15
ATOM
B
H62
DA
1
7
1.00
1
H
1.00
5.310
-2.600
5.960
B
H2
DA
15
ATOM
B
H2
DA
1
7
1.00
1
H
0.00
4.770
-10.860
7.650
B
P
DC
16
ATOM
B
P
DC
1
8
1.00
1
P
0.00
5.490
-11.940
6.940
B
OP1
DC
16
ATOM
B
OP1
DC
1
8
1.00
1
O
0.00
3.890
-11.210
8.790
B
OP2
DC
16
ATOM
B
OP2
DC
1
8
1.00
1
O
0.00
5.820
-9.750
8.160
B
O5'
DC
16
ATOM
B
O5'
DC
1
8
1.00
1
O
0.00
6.920
-9.340
7.340
B
C5'
DC
16
ATOM
B
C5'
DC
1
8
1.00
1
C
0.00
7.520
-8.070
7.900
B
C4'
DC
16
ATOM
B
C4'
DC
1
8
1.00
1
C
0.00
6.550
-7.010
7.910
B
O4'
DC
16
ATOM
B
O4'
DC
1
8
1.00
1
O
0.00
7.950
-8.220
9.340
B
C3'
DC
16
ATOM
B
C3'
DC
1
8
1.00
1
C
0.00
9.290
-8.720
9.460
B
O3'
DC
16
ATOM
B
O3'
DC
1
8
1.00
1
O
0.00
7.920
-6.790
9.860
B
C2'
DC
16
ATOM
B
C2'
DC
1
8
1.00
1
C
0.00
7.070
-6.050
8.840
B
C1'
DC
16
ATOM
B
C1'
DC
1
8
1.00
1
C
0.00
5.930
-5.330
9.480
B
N1
DC
16
ATOM
B
N1
DC
1
8
1.00
1
N
0.00
5.890
-3.930
9.470
B
C2
DC
16
ATOM
B
C2
DC
1
8
1.00
1
C
0.00
6.790
-3.280
8.950
B
O2
DC
16
ATOM
B
O2
DC
1
8
1.00
1
O
0.00
4.870
-3.280
10.040
B
N3
DC
16
ATOM
B
N3
DC
1
8
1.00
1
N
0.00
3.850
-3.920
10.620
B
C4
DC
16
ATOM
B
C4
DC
1
8
1.00
1
C
0.00
2.880
-3.220
11.180
B
N4
DC
16
ATOM
B
N4
DC
1
8
1.00
1
N
0.00
3.830
-5.310
10.660
B
C5
DC
16
ATOM
B
C5
DC
1
8
1.00
1
C
0.00
4.870
-6.020
10.090
B
C6
DC
16
ATOM
B
C6
DC
1
8
1.00
1
C
0.95
6.580
-9.160
6.330
B
H5'
DC
16
ATOM
B
H5'
DC
1
8
1.00
1
H
0.95
7.680
-10.120
7.320
B
H5''
DC
16
ATOM
B
H5''
DC
1
8
1.00
1
H
0.95
8.380
-7.770
7.310
B
H4'
DC
16
ATOM
B
H4'
DC
1
8
1.00
1
H
0.90
7.280
-8.840
9.910
B
H3'
DC
16
ATOM
B
H3'
DC
1
8
1.00
1
H
0.00
9.900
-8.120
9.030
B
HO3'
DC
16
ATOM
B
HO3'
DC
1
8
1.00
1
H
0.77
7.470
-6.720
10.830
B
H2'
DC
16
ATOM
B
H2'
DC
1
8
1.00
1
H
0.77
8.910
-6.360
9.890
B
H2''
DC
16
ATOM
B
H2''
DC
1
8
1.00
1
H
0.90
7.660
-5.330
8.300
B
H1'
DC
16
ATOM
B
H1'
DC
1
8
1.00
1
H
0.00
2.920
-2.260
11.170
B
H41
DC
16
ATOM
B
H41
DC
1
8
1.00
1
H
0.00
2.130
-3.660
11.600
B
H42
DC
16
ATOM
B
H42
DC
1
8
1.00
1
H
1.00
3.020
-5.830
11.140
B
H5
DC
16
ATOM
B
H5
DC
1
8
1.00
1
H
0.95
4.860
-7.100
10.130
B
H6
DC
16
ATOM
B
H6
DC
1
8
1.00
1
H
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Baleja, J.D.
Sykes, B.D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
Y
13
N
N
Y
14
N
C
Y
15
N
N
Y
16
N
C
Y
17
N
C
N
18
N
N
Y
19
N
N
Y
20
N
C
Y
21
N
N
Y
22
N
C
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
O
N
38
N
P
N
39
N
O
N
40
N
O
N
41
N
O
N
42
N
C
N
43
R
C
N
44
N
O
N
45
S
C
N
46
N
O
N
47
N
C
N
48
R
C
N
49
N
N
N
50
N
C
N
51
N
O
N
52
N
N
N
53
N
C
N
54
N
N
N
55
N
C
N
56
N
C
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
O
N
72
N
P
N
73
N
O
N
74
N
O
N
75
N
O
N
76
N
C
N
77
R
C
N
78
N
O
N
79
S
C
N
80
N
O
N
81
N
C
N
82
R
C
Y
83
N
N
Y
84
N
C
Y
85
N
N
Y
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
C
N
91
N
N
N
92
N
N
Y
93
N
C
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
O
N
109
N
P
N
110
N
O
N
111
N
O
N
112
N
O
N
113
N
C
N
114
R
C
N
115
N
O
N
116
S
C
N
117
N
O
N
118
N
C
N
119
R
C
N
120
N
N
N
121
N
C
N
122
N
O
N
123
N
N
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
Y
24
N
sing
Y
25
N
sing
Y
26
N
doub
N
27
N
sing
Y
28
N
sing
Y
29
N
sing
Y
30
N
doub
N
31
N
sing
Y
32
N
doub
N
33
N
sing
N
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
sing
N
102
N
sing
Y
103
N
doub
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
215
411
428
10.1016/S0022-2836(05)80361-4
2231713
Solution conformation of purine-pyrimidine DNA octamers using nuclear magnetic resonance, restrained molecular dynamics and NOE-based refinement.
1990
US
J.Magn.Reson.
JOMRA4
0624
0022-2364
87
375
Distance Measurement and Structure Refinement with Noe Data
1990
10.2210/pdb1d19/pdb
pdb_00001d19
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
2426.617
DNA (5'-D(*GP*TP*AP*CP*GP*TP*AP*C)-3')
2
syn
polymer
DEOXYRIBONUCLEIC ACID
no
no
(DG)(DT)(DA)(DC)(DG)(DT)(DA)(DC)
GTACGTAC
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
-7.468
1
19
A
1
B
16
-3.005
A_DG1:DC16_B
1
-10.997
-0.538
0.064
-0.175
-1.169
1
20
A
2
B
15
-4.753
A_DT2:DA15_B
2
-10.841
0.055
0.165
-0.086
9.027
1
20
A
3
B
14
-6.784
A_DA3:DT14_B
3
-7.003
0.269
0.288
-0.001
10.847
1
19
A
4
B
13
-4.003
A_DC4:DG13_B
4
-16.637
0.650
0.210
-0.216
-8.705
1
19
A
5
B
12
-3.781
A_DG5:DC12_B
5
-17.765
-0.689
0.212
-0.241
-8.641
1
20
A
6
B
11
-6.979
A_DT6:DA11_B
6
-9.726
-0.292
0.264
-0.006
0.462
1
20
A
7
B
10
-4.125
A_DA7:DT10_B
7
-13.198
-0.042
0.159
-0.065
4.511
1
19
A
8
B
9
-4.152
A_DC8:DG9_B
8
-14.031
0.698
0.217
-0.229
3.167
33.421
A
A
1
2
1.170
B
B
16
15
3.168
0.673
-0.217
-0.372
AA_DG1DT2:DA15DC16_BB
1
-1.736
3.020
33.371
-0.754
0.099
3.157
34.492
A
A
2
3
8.429
B
B
15
14
3.077
4.980
-0.636
0.621
AA_DT2DA3:DT14DA15_BB
2
-1.450
2.453
34.112
0.307
0.856
3.258
33.429
A
A
3
4
-3.996
B
B
14
13
3.261
-2.296
-0.097
-0.165
AA_DA3DC4:DG13DT14_BB
3
1.307
-2.274
33.327
0.092
0.384
3.103
38.694
A
A
4
5
16.963
B
B
13
12
3.416
11.093
0.055
-0.650
AA_DC4DG5:DC12DG13_BB
4
0.221
-0.338
37.127
-2.369
-0.055
3.285
33.938
A
A
5
6
-4.246
B
B
12
11
3.276
-2.476
-0.002
-0.268
AA_DG5DT6:DA11DC12_BB
5
-1.050
1.801
33.835
-0.061
-0.166
3.147
36.975
A
A
6
7
6.953
B
B
11
10
3.053
4.399
0.471
0.863
AA_DT6DA7:DT10DA11_BB
6
1.398
-2.210
36.696
0.797
-0.564
3.169
35.101
A
A
7
8
-1.068
B
B
10
9
3.160
-0.644
0.252
-0.269
AA_DA7DC8:DG9DT10_BB
7
0.651
-1.079
35.089
-0.354
-0.324
database_2
pdbx_database_status
pdbx_struct_assembly
pdbx_struct_oper_list
chem_comp_atom
chem_comp_bond
repository
Initial release
Version format compliance
Version format compliance
Database references
Derived calculations
Other
Data collection
1
0
1991-07-15
1
1
2008-03-24
1
2
2011-07-13
1
3
2022-02-16
1
4
2024-05-22
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_database_status.process_site
Y
BNL
1990-08-01
REL
REL
CHEMICALLY SYNTHESIZED
sample
1
THE STRUCTURE WAS THEN REFINED AGAINST PRIMARY NOE DATA. THE R VALUE IS 0.19 OVER ALL OBSERVED, QUANTIFIED, NOE CROSSPEAK INTENSITIES. THE NOE-BASED PROCEDURE USED TO REFINE THESE STRUCTURES INCLUDED CORRELATION TIME ADJUSTMENT FACTORS, WHICH ARE APPROXIMATELY RELATED TO THE INVERSE OF THE TEMPERATURE FACTORS ASSOCIATED WITH X-RAY CRYSTALLOGRAPHY. THESE VALUES ARE INCLUDED IN THE COLUMN NORMALLY USED FOR TEMPERATURE FACTORS. VALUES OF 0.0 APPEAR FOR NON-HYDROGEN ATOMS, WHICH WERE NOT USED IN THE NMR CALCULATIONS. FURTHER DETAILS ARE GIVEN IN REFERENCE 1.
ENERGY MINIMIZATION, MOLECULAR DYNAMICS
DE VLIEG ET AL.
refinement
GROMOS
G
1
n
1
DG
1
A
T
2
n
2
DT
2
A
A
3
n
3
DA
3
A
C
4
n
4
DC
4
A
G
5
n
5
DG
5
A
T
6
n
6
DT
6
A
A
7
n
7
DA
7
A
C
8
n
8
DC
8
A
G
9
n
1
DG
9
B
T
10
n
2
DT
10
B
A
11
n
3
DA
11
B
C
12
n
4
DC
12
B
G
13
n
5
DG
13
B
T
14
n
6
DT
14
B
A
15
n
7
DA
15
B
C
16
n
8
DC
16
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
DG
1
0.077
SIDE CHAIN
1
A
DT
2
0.086
SIDE CHAIN
1
A
DA
3
0.050
SIDE CHAIN
1
A
DC
4
0.077
SIDE CHAIN
1
A
DG
5
0.101
SIDE CHAIN
1
A
DT
6
0.099
SIDE CHAIN
1
B
DG
9
0.092
SIDE CHAIN
1
B
DT
10
0.110
SIDE CHAIN
1
B
DC
12
0.078
SIDE CHAIN
1
B
DG
13
0.099
SIDE CHAIN
1
B
DT
14
0.092
SIDE CHAIN
1
-5.24
0.60
125.10
119.86
A
A
A
C6
N1
C2
DG
DG
DG
1
1
1
N
1
-3.76
0.60
123.90
120.14
A
A
A
N1
C2
N3
DG
DG
DG
1
1
1
N
1
9.11
0.50
111.90
121.01
A
A
A
C2
N3
C4
DG
DG
DG
1
1
1
N
1
-7.15
0.50
128.60
121.45
A
A
A
N3
C4
C5
DG
DG
DG
1
1
1
N
1
6.98
0.50
111.50
118.48
A
A
A
C5
C6
N1
DG
DG
DG
1
1
1
N
1
-2.97
0.40
110.80
107.83
A
A
A
C4
C5
N7
DG
DG
DG
1
1
1
N
1
-3.29
0.50
113.10
109.81
A
A
A
N7
C8
N9
DG
DG
DG
1
1
1
N
1
5.16
0.60
126.00
131.16
A
A
A
N3
C4
N9
DG
DG
DG
1
1
1
N
1
-7.80
0.60
128.60
120.80
A
A
A
C5
C6
O6
DG
DG
DG
1
1
1
N
1
5.32
0.60
114.60
119.92
A
A
A
N1
C2
N3
DT
DT
DT
2
2
2
N
1
-5.95
0.60
127.20
121.25
A
A
A
C2
N3
C4
DT
DT
DT
2
2
2
N
1
4.16
0.60
115.20
119.36
A
A
A
N3
C4
C5
DT
DT
DT
2
2
2
N
1
-3.78
0.60
122.30
118.52
A
A
A
N3
C2
O2
DT
DT
DT
2
2
2
N
1
-4.68
0.60
122.90
118.22
A
A
A
C6
C5
C7
DT
DT
DT
2
2
2
N
1
-6.90
0.50
129.30
122.40
A
A
A
N1
C2
N3
DA
DA
DA
3
3
3
N
1
9.02
0.50
110.60
119.62
A
A
A
C2
N3
C4
DA
DA
DA
3
3
3
N
1
-6.91
0.70
126.80
119.89
A
A
A
N3
C4
C5
DA
DA
DA
3
3
3
N
1
3.26
0.50
103.90
107.16
A
A
A
C5
N7
C8
DA
DA
DA
3
3
3
N
1
-3.42
0.50
113.80
110.38
A
A
A
N7
C8
N9
DA
DA
DA
3
3
3
N
1
5.68
0.80
127.40
133.08
A
A
A
N3
C4
N9
DA
DA
DA
3
3
3
N
1
-5.46
0.60
125.10
119.64
A
A
A
C6
N1
C2
DG
DG
DG
5
5
5
N
1
8.41
0.50
111.90
120.31
A
A
A
C2
N3
C4
DG
DG
DG
5
5
5
N
1
-7.32
0.50
128.60
121.28
A
A
A
N3
C4
C5
DG
DG
DG
5
5
5
N
1
7.55
0.50
111.50
119.05
A
A
A
C5
C6
N1
DG
DG
DG
5
5
5
N
1
-3.38
0.40
110.80
107.42
A
A
A
C4
C5
N7
DG
DG
DG
5
5
5
N
1
3.28
0.50
104.30
107.58
A
A
A
C5
N7
C8
DG
DG
DG
5
5
5
N
1
-3.09
0.50
113.10
110.01
A
A
A
N7
C8
N9
DG
DG
DG
5
5
5
N
1
5.38
0.60
126.00
131.38
A
A
A
N3
C4
N9
DG
DG
DG
5
5
5
N
1
-8.35
0.60
128.60
120.25
A
A
A
C5
C6
O6
DG
DG
DG
5
5
5
N
1
2.39
0.30
108.30
110.69
A
A
A
O4'
C1'
N1
DT
DT
DT
6
6
6
N
1
4.58
0.60
114.60
119.18
A
A
A
N1
C2
N3
DT
DT
DT
6
6
6
N
1
-6.27
0.60
127.20
120.93
A
A
A
C2
N3
C4
DT
DT
DT
6
6
6
N
1
4.94
0.60
115.20
120.14
A
A
A
N3
C4
C5
DT
DT
DT
6
6
6
N
1
-3.73
0.60
122.30
118.57
A
A
A
N3
C2
O2
DT
DT
DT
6
6
6
N
1
-4.50
0.60
122.90
118.40
A
A
A
C6
C5
C7
DT
DT
DT
6
6
6
N
1
-6.70
0.50
129.30
122.60
A
A
A
N1
C2
N3
DA
DA
DA
7
7
7
N
1
8.73
0.50
110.60
119.33
A
A
A
C2
N3
C4
DA
DA
DA
7
7
7
N
1
-7.04
0.70
126.80
119.76
A
A
A
N3
C4
C5
DA
DA
DA
7
7
7
N
1
3.11
0.50
103.90
107.01
A
A
A
C5
N7
C8
DA
DA
DA
7
7
7
N
1
-3.48
0.50
113.80
110.32
A
A
A
N7
C8
N9
DA
DA
DA
7
7
7
N
1
5.09
0.80
127.40
132.49
A
A
A
N3
C4
N9
DA
DA
DA
7
7
7
N
1
-5.57
0.60
125.10
119.53
B
B
B
C6
N1
C2
DG
DG
DG
9
9
9
N
1
-3.69
0.60
123.90
120.21
B
B
B
N1
C2
N3
DG
DG
DG
9
9
9
N
1
9.57
0.50
111.90
121.47
B
B
B
C2
N3
C4
DG
DG
DG
9
9
9
N
1
-8.18
0.50
128.60
120.42
B
B
B
N3
C4
C5
DG
DG
DG
9
9
9
N
1
7.13
0.50
111.50
118.63
B
B
B
C5
C6
N1
DG
DG
DG
9
9
9
N
1
-3.51
0.40
110.80
107.29
B
B
B
C4
C5
N7
DG
DG
DG
9
9
9
N
1
3.37
0.50
104.30
107.67
B
B
B
C5
N7
C8
DG
DG
DG
9
9
9
N
1
6.12
0.60
126.00
132.12
B
B
B
N3
C4
N9
DG
DG
DG
9
9
9
N
1
-7.90
0.60
128.60
120.70
B
B
B
C5
C6
O6
DG
DG
DG
9
9
9
N
1
-3.08
0.50
121.30
118.22
B
B
B
C6
N1
C2
DT
DT
DT
10
10
10
N
1
5.19
0.60
114.60
119.79
B
B
B
N1
C2
N3
DT
DT
DT
10
10
10
N
1
-5.81
0.60
127.20
121.39
B
B
B
C2
N3
C4
DT
DT
DT
10
10
10
N
1
3.92
0.60
115.20
119.12
B
B
B
N3
C4
C5
DT
DT
DT
10
10
10
N
1
-3.85
0.60
122.30
118.45
B
B
B
N3
C2
O2
DT
DT
DT
10
10
10
N
1
-4.57
0.60
122.90
118.33
B
B
B
C6
C5
C7
DT
DT
DT
10
10
10
N
1
-6.53
0.50
129.30
122.77
B
B
B
N1
C2
N3
DA
DA
DA
11
11
11
N
1
9.00
0.50
110.60
119.60
B
B
B
C2
N3
C4
DA
DA
DA
11
11
11
N
1
-7.15
0.70
126.80
119.65
B
B
B
N3
C4
C5
DA
DA
DA
11
11
11
N
1
6.06
0.80
127.40
133.46
B
B
B
N3
C4
N9
DA
DA
DA
11
11
11
N
1
-5.73
0.60
125.10
119.37
B
B
B
C6
N1
C2
DG
DG
DG
13
13
13
N
1
9.20
0.50
111.90
121.10
B
B
B
C2
N3
C4
DG
DG
DG
13
13
13
N
1
-7.48
0.50
128.60
121.12
B
B
B
N3
C4
C5
DG
DG
DG
13
13
13
N
1
7.53
0.50
111.50
119.03
B
B
B
C5
C6
N1
DG
DG
DG
13
13
13
N
1
-3.02
0.40
110.80
107.78
B
B
B
C4
C5
N7
DG
DG
DG
13
13
13
N
1
3.07
0.50
104.30
107.37
B
B
B
C5
N7
C8
DG
DG
DG
13
13
13
N
1
-3.15
0.50
113.10
109.95
B
B
B
N7
C8
N9
DG
DG
DG
13
13
13
N
1
5.67
0.60
126.00
131.67
B
B
B
N3
C4
N9
DG
DG
DG
13
13
13
N
1
-8.43
0.60
128.60
120.17
B
B
B
C5
C6
O6
DG
DG
DG
13
13
13
N
1
5.08
0.60
114.60
119.68
B
B
B
N1
C2
N3
DT
DT
DT
14
14
14
N
1
-6.18
0.60
127.20
121.02
B
B
B
C2
N3
C4
DT
DT
DT
14
14
14
N
1
4.17
0.60
115.20
119.37
B
B
B
N3
C4
C5
DT
DT
DT
14
14
14
N
1
-4.36
0.60
122.30
117.94
B
B
B
N3
C2
O2
DT
DT
DT
14
14
14
N
1
-4.68
0.60
122.90
118.22
B
B
B
C6
C5
C7
DT
DT
DT
14
14
14
N
1
-6.15
0.50
129.30
123.15
B
B
B
N1
C2
N3
DA
DA
DA
15
15
15
N
1
8.52
0.50
110.60
119.12
B
B
B
C2
N3
C4
DA
DA
DA
15
15
15
N
1
-6.67
0.70
126.80
120.13
B
B
B
N3
C4
C5
DA
DA
DA
15
15
15
N
1
3.49
0.50
103.90
107.39
B
B
B
C5
N7
C8
DA
DA
DA
15
15
15
N
1
-3.49
0.50
113.80
110.31
B
B
B
N7
C8
N9
DA
DA
DA
15
15
15
N
1
5.28
0.80
127.40
132.68
B
B
B
N3
C4
N9
DA
DA
DA
15
15
15
N
1
A
A
C5
N7
DG
DG
1
1
-0.062
0.006
1.388
1.326
N
1
A
A
N9
C4
DG
DG
1
1
-0.050
0.008
1.375
1.325
N
1
A
A
C4
C5
DT
DT
2
2
-0.057
0.009
1.445
1.388
N
1
A
A
C5
C6
DT
DT
2
2
0.054
0.007
1.339
1.393
N
1
A
A
C5
C7
DT
DT
2
2
0.037
0.006
1.496
1.533
N
1
A
A
C5
N7
DA
DA
3
3
-0.067
0.006
1.388
1.321
N
1
A
A
N9
C4
DA
DA
3
3
-0.041
0.006
1.374
1.333
N
1
A
A
N1
C6
DC
DC
4
4
0.038
0.006
1.367
1.405
N
1
A
A
C5
C6
DC
DC
4
4
0.049
0.008
1.339
1.388
N
1
A
A
C5
N7
DG
DG
5
5
-0.057
0.006
1.388
1.331
N
1
A
A
C5
C6
DT
DT
6
6
0.048
0.007
1.339
1.387
N
1
A
A
C5
N7
DA
DA
7
7
-0.059
0.006
1.388
1.329
N
1
A
A
N9
C4
DA
DA
7
7
-0.051
0.006
1.374
1.323
N
1
B
B
C5
N7
DG
DG
9
9
-0.063
0.006
1.388
1.325
N
1
B
B
N9
C4
DG
DG
9
9
-0.050
0.008
1.375
1.325
N
1
B
B
C5
C6
DT
DT
10
10
0.042
0.007
1.339
1.381
N
1
B
B
C5
N7
DA
DA
11
11
-0.059
0.006
1.388
1.329
N
1
B
B
N9
C4
DA
DA
11
11
-0.041
0.006
1.374
1.333
N
1
B
B
C5
C6
DC
DC
12
12
0.051
0.008
1.339
1.390
N
1
B
B
C5
N7
DG
DG
13
13
-0.062
0.006
1.388
1.326
N
1
B
B
N9
C4
DG
DG
13
13
-0.049
0.008
1.375
1.326
N
1
B
B
C5
C6
DT
DT
14
14
0.044
0.007
1.339
1.383
N
1
B
B
C5
N7
DA
DA
15
15
-0.062
0.006
1.388
1.326
N
1
B
B
N9
C4
DA
DA
15
15
-0.047
0.006
1.374
1.327
N
1
B
B
N1
C6
DC
DC
16
16
0.037
0.006
1.367
1.404
N
SOLUTION CONFORMATION OF PURINE-PYRIMIDINE DNA OCTAMERS USING NUCLEAR MAGNETIC RESONANCE, RESTRAINED MOLECULAR DYNAMICS AND NOE-BASED REFINEMENT
1
N
N
1
N
N
hydrog
WATSON-CRICK
A
DG
1
A
N1
DG
1
1_555
B
DC
16
B
N3
DC
8
1_555
hydrog
WATSON-CRICK
A
DG
1
A
N2
DG
1
1_555
B
DC
16
B
O2
DC
8
1_555
hydrog
WATSON-CRICK
A
DG
1
A
O6
DG
1
1_555
B
DC
16
B
N4
DC
8
1_555
hydrog
WATSON-CRICK
A
DT
2
A
N3
DT
2
1_555
B
DA
15
B
N1
DA
7
1_555
hydrog
WATSON-CRICK
A
DT
2
A
O4
DT
2
1_555
B
DA
15
B
N6
DA
7
1_555
hydrog
WATSON-CRICK
A
DA
3
A
N1
DA
3
1_555
B
DT
14
B
N3
DT
6
1_555
hydrog
WATSON-CRICK
A
DA
3
A
N6
DA
3
1_555
B
DT
14
B
O4
DT
6
1_555
hydrog
WATSON-CRICK
A
DC
4
A
N3
DC
4
1_555
B
DG
13
B
N1
DG
5
1_555
hydrog
WATSON-CRICK
A
DC
4
A
N4
DC
4
1_555
B
DG
13
B
O6
DG
5
1_555
hydrog
WATSON-CRICK
A
DC
4
A
O2
DC
4
1_555
B
DG
13
B
N2
DG
5
1_555
hydrog
WATSON-CRICK
A
DG
5
A
N1
DG
5
1_555
B
DC
12
B
N3
DC
4
1_555
hydrog
WATSON-CRICK
A
DG
5
A
N2
DG
5
1_555
B
DC
12
B
O2
DC
4
1_555
hydrog
WATSON-CRICK
A
DG
5
A
O6
DG
5
1_555
B
DC
12
B
N4
DC
4
1_555
hydrog
WATSON-CRICK
A
DT
6
A
N3
DT
6
1_555
B
DA
11
B
N1
DA
3
1_555
hydrog
WATSON-CRICK
A
DT
6
A
O4
DT
6
1_555
B
DA
11
B
N6
DA
3
1_555
hydrog
WATSON-CRICK
A
DA
7
A
N1
DA
7
1_555
B
DT
10
B
N3
DT
2
1_555
hydrog
WATSON-CRICK
A
DA
7
A
N6
DA
7
1_555
B
DT
10
B
O4
DT
2
1_555
hydrog
WATSON-CRICK
A
DC
8
A
N3
DC
8
1_555
B
DG
9
B
N1
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
8
A
N4
DC
8
1_555
B
DG
9
B
O6
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
8
A
O2
DC
8
1_555
B
DG
9
B
N2
DG
1
1_555
DNA
DNA, DOUBLE HELIX
1D19
PDB
1
1D19
1
8
1D19
1
8
1D19
A
1
1
8
9
16
1D19
9
16
1D19
B
1
1
8
1
P 1