data_1D21 # _entry.id 1D21 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1D21 pdb_00001d21 10.2210/pdb1d21/pdb RCSB DDFA14 ? ? WWPDB D_1000172626 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1991-07-15 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2011-08-24 5 'Structure model' 1 4 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Atomic model' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1D21 _pdbx_database_status.recvd_initial_deposition_date 1990-08-08 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site BNL _pdbx_database_status.SG_entry . _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gao, Y.-G.' 1 'Liaw, Y.-C.' 2 'Robinson, H.' 3 'Wang, A.H.-J.' 4 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Binding of the antitumor drug nogalamycin and its derivatives to DNA: structural comparison.' Biochemistry 29 10307 10316 1990 BICHAW US 0006-2960 0033 ? 2261474 10.1021/bi00497a004 1 'Antitumor Drug Nogalamycin Binds DNA in Both Grooves Simultaneously: Molecular Structure of Nogalamycin-DNA Complex' Biochemistry 28 9913 9918 1989 BICHAW US 0006-2960 0033 ? ? ? 2 'NMR Studies on the Binding of Antitumor Drug Nogalamycin to DNA Hexamer d(CGTACG)' 'Nucleic Acids Res.' 18 4851 4858 1990 NARHAD UK 0305-1048 0389 ? ? ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gao, Y.G.' 1 ? primary 'Liaw, Y.C.' 2 ? primary 'Robinson, H.' 3 ? primary 'Wang, A.H.' 4 ? 1 'Liaw, Y.-C.' 5 ? 1 'Gao, Y.-G.' 6 ? 1 'Robinson, H.' 7 ? 1 'Van Der Marel, G.A.' 8 ? 1 'Van Boom, J.H.' 9 ? 1 'Wang, A.H.-J.' 10 ? 2 'Robinson, H.' 11 ? 2 'Liaw, Y.-C.' 12 ? 2 'Van Der Marel, G.A.' 13 ? 2 'Van Boom, J.H.' 14 ? 2 'Wang, A.H.-J.' 15 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*(5CM)P*GP*TP*(AS)P*(5CM)P*G)-3') ; 1853.336 2 ? ? ? ? 2 non-polymer syn NOGALAMYCIN 787.803 2 ? ? ? ? 3 water nat water 18.015 77 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(5CM)(DG)(DT)(AS)(5CM)(DG)' _entity_poly.pdbx_seq_one_letter_code_can CGTACG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 NOGALAMYCIN NGM 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 5CM n 1 2 DG n 1 3 DT n 1 4 AS n 1 5 5CM n 1 6 DG n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 AS 'DNA linking' n ;2-DEOXY-ADENOSINE -5'-THIO-MONOPHOSPHATE ; ? 'C10 H14 N5 O5 P S' 347.287 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 NGM non-polymer . NOGALAMYCIN ? 'C39 H49 N O16' 787.803 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 5CM 1 1 1 5CM 5CM A . n A 1 2 DG 2 2 2 DG DG A . n A 1 3 DT 3 3 3 DT DT A . n A 1 4 AS 4 4 4 AS AS A . n A 1 5 5CM 5 5 5 5CM 5CM A . n A 1 6 DG 6 6 6 DG DG A . n B 1 1 5CM 1 7 7 5CM 5CM B . n B 1 2 DG 2 8 8 DG DG B . n B 1 3 DT 3 9 9 DT DT B . n B 1 4 AS 4 10 10 AS AS B . n B 1 5 5CM 5 11 11 5CM 5CM B . n B 1 6 DG 6 12 12 DG DG B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NGM 1 14 14 NGM NGM A . D 2 NGM 1 13 13 NGM NGM B . E 3 HOH 1 15 15 HOH HOH A . E 3 HOH 2 19 19 HOH HOH A . E 3 HOH 3 23 23 HOH HOH A . E 3 HOH 4 25 25 HOH HOH A . E 3 HOH 5 28 28 HOH HOH A . E 3 HOH 6 30 30 HOH HOH A . E 3 HOH 7 31 31 HOH HOH A . E 3 HOH 8 32 32 HOH HOH A . E 3 HOH 9 35 35 HOH HOH A . E 3 HOH 10 36 36 HOH HOH A . E 3 HOH 11 38 38 HOH HOH A . E 3 HOH 12 40 40 HOH HOH A . E 3 HOH 13 41 41 HOH HOH A . E 3 HOH 14 42 42 HOH HOH A . E 3 HOH 15 43 43 HOH HOH A . E 3 HOH 16 44 44 HOH HOH A . E 3 HOH 17 47 47 HOH HOH A . E 3 HOH 18 48 48 HOH HOH A . E 3 HOH 19 51 51 HOH HOH A . E 3 HOH 20 52 52 HOH HOH A . E 3 HOH 21 53 53 HOH HOH A . E 3 HOH 22 55 55 HOH HOH A . E 3 HOH 23 57 57 HOH HOH A . E 3 HOH 24 58 58 HOH HOH A . E 3 HOH 25 62 62 HOH HOH A . E 3 HOH 26 63 63 HOH HOH A . E 3 HOH 27 64 64 HOH HOH A . E 3 HOH 28 66 66 HOH HOH A . E 3 HOH 29 67 67 HOH HOH A . E 3 HOH 30 68 68 HOH HOH A . E 3 HOH 31 69 69 HOH HOH A . E 3 HOH 32 70 70 HOH HOH A . E 3 HOH 33 71 71 HOH HOH A . E 3 HOH 34 72 72 HOH HOH A . E 3 HOH 35 73 73 HOH HOH A . E 3 HOH 36 76 76 HOH HOH A . E 3 HOH 37 78 78 HOH HOH A . E 3 HOH 38 79 79 HOH HOH A . E 3 HOH 39 80 80 HOH HOH A . E 3 HOH 40 81 81 HOH HOH A . E 3 HOH 41 82 82 HOH HOH A . E 3 HOH 42 83 83 HOH HOH A . E 3 HOH 43 86 86 HOH HOH A . E 3 HOH 44 87 87 HOH HOH A . E 3 HOH 45 90 90 HOH HOH A . F 3 HOH 1 16 16 HOH HOH B . F 3 HOH 2 17 17 HOH HOH B . F 3 HOH 3 18 18 HOH HOH B . F 3 HOH 4 20 20 HOH HOH B . F 3 HOH 5 21 21 HOH HOH B . F 3 HOH 6 22 22 HOH HOH B . F 3 HOH 7 24 24 HOH HOH B . F 3 HOH 8 26 26 HOH HOH B . F 3 HOH 9 27 27 HOH HOH B . F 3 HOH 10 29 29 HOH HOH B . F 3 HOH 11 33 33 HOH HOH B . F 3 HOH 12 34 34 HOH HOH B . F 3 HOH 13 37 37 HOH HOH B . F 3 HOH 14 39 39 HOH HOH B . F 3 HOH 15 45 45 HOH HOH B . F 3 HOH 16 46 46 HOH HOH B . F 3 HOH 17 49 49 HOH HOH B . F 3 HOH 18 50 50 HOH HOH B . F 3 HOH 19 54 54 HOH HOH B . F 3 HOH 20 56 56 HOH HOH B . F 3 HOH 21 59 59 HOH HOH B . F 3 HOH 22 60 60 HOH HOH B . F 3 HOH 23 61 61 HOH HOH B . F 3 HOH 24 65 65 HOH HOH B . F 3 HOH 25 74 74 HOH HOH B . F 3 HOH 26 75 75 HOH HOH B . F 3 HOH 27 77 77 HOH HOH B . F 3 HOH 28 84 84 HOH HOH B . F 3 HOH 29 85 85 HOH HOH B . F 3 HOH 30 88 88 HOH HOH B . F 3 HOH 31 89 89 HOH HOH B . F 3 HOH 32 91 91 HOH HOH B . # _software.name NUCLSQ _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1D21 _cell.length_a 26.310 _cell.length_b 26.310 _cell.length_c 100.250 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 1D21 _symmetry.space_group_name_H-M 'P 61' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? # _exptl.entry_id 1D21 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 54.48 _exptl_crystal.density_Matthews 2.70 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 298.00 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.00 _exptl_crystal_grow.pdbx_details 'pH 5.00, VAPOR DIFFUSION, temperature 298.00K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 'PEG 400' ? ? ? 1 3 1 MGCL2 ? ? ? 1 4 1 'NA CACODYLATE' ? ? ? 1 5 2 WATER ? ? ? 1 6 2 'PEG 400' ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 298.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector DIFFRACTOMETER _diffrn_detector.type 'RIGAKU AFC-5R' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1D21 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F 2.000 _reflns.d_resolution_low ? _reflns.d_resolution_high 1.700 _reflns.number_obs 3386 _reflns.number_all 5276 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _refine.entry_id 1D21 _refine.ls_number_reflns_obs 3386 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low ? _refine.ls_d_res_high 1.700 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.208 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_phase_error ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 244 _refine_hist.pdbx_number_atoms_ligand 112 _refine_hist.number_atoms_solvent 77 _refine_hist.number_atoms_total 433 _refine_hist.d_res_high 1.700 _refine_hist.d_res_low . # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function n_bond_d 0.032 ? ? ? 'X-RAY DIFFRACTION' ? n_angle_d 0.054 ? ? ? 'X-RAY DIFFRACTION' ? n_planar_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_angle_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_angle_it ? ? ? ? 'X-RAY DIFFRACTION' ? n_bond_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_dihedral_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_impr_tor ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_plane_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_chiral_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_singtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? n_multtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? n_xhyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1D21 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1D21 _struct.title 'BINDING OF THE ANTITUMOR DRUG NOGALAMYCIN AND ITS DERIVATIVES TO DNA: STRUCTURAL COMPARISON' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1D21 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'RIGHT HANDED DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, MODIFIED, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1D21 _struct_ref.pdbx_db_accession 1D21 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 1D21 A 1 ? 6 ? 1D21 1 ? 6 ? 1 6 2 1 1D21 B 1 ? 6 ? 1D21 7 ? 12 ? 7 12 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A 5CM 1 "O3'" ? ? ? 1_555 A DG 2 P ? ? A 5CM 1 A DG 2 1_555 ? ? ? ? ? ? ? 1.628 ? ? covale2 covale both ? A DT 3 "O3'" ? ? ? 1_555 A AS 4 P ? ? A DT 3 A AS 4 1_555 ? ? ? ? ? ? ? 1.600 ? ? covale3 covale both ? A AS 4 "O3'" ? ? ? 1_555 A 5CM 5 P ? ? A AS 4 A 5CM 5 1_555 ? ? ? ? ? ? ? 1.743 ? ? covale4 covale both ? A 5CM 5 "O3'" ? ? ? 1_555 A DG 6 P ? ? A 5CM 5 A DG 6 1_555 ? ? ? ? ? ? ? 1.576 ? ? covale5 covale both ? B 5CM 1 "O3'" ? ? ? 1_555 B DG 2 P ? ? B 5CM 7 B DG 8 1_555 ? ? ? ? ? ? ? 1.622 ? ? covale6 covale both ? B DT 3 "O3'" ? ? ? 1_555 B AS 4 P ? ? B DT 9 B AS 10 1_555 ? ? ? ? ? ? ? 1.487 ? ? covale7 covale both ? B AS 4 "O3'" ? ? ? 1_555 B 5CM 5 P ? ? B AS 10 B 5CM 11 1_555 ? ? ? ? ? ? ? 1.644 ? ? covale8 covale both ? B 5CM 5 "O3'" ? ? ? 1_555 B DG 6 P ? ? B 5CM 11 B DG 12 1_555 ? ? ? ? ? ? ? 1.607 ? ? hydrog1 hydrog ? ? A 5CM 1 N3 ? ? ? 1_555 B DG 6 N1 ? ? A 5CM 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A 5CM 1 N4 ? ? ? 1_555 B DG 6 O6 ? ? A 5CM 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A 5CM 1 O2 ? ? ? 1_555 B DG 6 N2 ? ? A 5CM 1 B DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DG 2 N1 ? ? ? 1_555 B 5CM 5 N3 ? ? A DG 2 B 5CM 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DG 2 N2 ? ? ? 1_555 B 5CM 5 O2 ? ? A DG 2 B 5CM 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DG 2 O6 ? ? ? 1_555 B 5CM 5 N4 ? ? A DG 2 B 5CM 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DT 3 N3 ? ? ? 1_555 B AS 4 N1 ? ? A DT 3 B AS 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DT 3 O4 ? ? ? 1_555 B AS 4 N6 ? ? A DT 3 B AS 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A AS 4 N1 ? ? ? 1_555 B DT 3 N3 ? ? A AS 4 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A AS 4 N6 ? ? ? 1_555 B DT 3 O4 ? ? A AS 4 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A 5CM 5 N3 ? ? ? 1_555 B DG 2 N1 ? ? A 5CM 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A 5CM 5 N4 ? ? ? 1_555 B DG 2 O6 ? ? A 5CM 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A 5CM 5 O2 ? ? ? 1_555 B DG 2 N2 ? ? A 5CM 5 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B 5CM 1 N3 ? ? A DG 6 B 5CM 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B 5CM 1 O2 ? ? A DG 6 B 5CM 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B 5CM 1 N4 ? ? A DG 6 B 5CM 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NGM 14 ? 12 'BINDING SITE FOR RESIDUE NGM A 14' AC2 Software B NGM 13 ? 11 'BINDING SITE FOR RESIDUE NGM B 13' 1 ? ? ? ? ? ? ? # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 12 5CM A 1 ? 5CM A 1 . ? 1_555 ? 2 AC1 12 DG A 2 ? DG A 2 . ? 1_555 ? 3 AC1 12 DT A 3 ? DT A 3 . ? 1_555 ? 4 AC1 12 AS A 4 ? AS A 4 . ? 5_554 ? 5 AC1 12 AS A 4 ? AS A 4 . ? 1_555 ? 6 AC1 12 HOH E . ? HOH A 40 . ? 1_555 ? 7 AC1 12 HOH E . ? HOH A 58 . ? 1_555 ? 8 AC1 12 DG B 2 ? DG B 8 . ? 6_665 ? 9 AC1 12 AS B 4 ? AS B 10 . ? 1_555 ? 10 AC1 12 5CM B 5 ? 5CM B 11 . ? 1_555 ? 11 AC1 12 DG B 6 ? DG B 12 . ? 1_555 ? 12 AC1 12 HOH F . ? HOH B 59 . ? 1_555 ? 13 AC2 11 5CM A 5 ? 5CM A 5 . ? 1_555 ? 14 AC2 11 DG A 6 ? DG A 6 . ? 1_555 ? 15 AC2 11 HOH E . ? HOH A 35 . ? 1_555 ? 16 AC2 11 HOH E . ? HOH A 52 . ? 1_445 ? 17 AC2 11 5CM B 1 ? 5CM B 7 . ? 1_555 ? 18 AC2 11 DG B 2 ? DG B 8 . ? 1_555 ? 19 AC2 11 DT B 3 ? DT B 9 . ? 6_555 ? 20 AC2 11 DT B 3 ? DT B 9 . ? 1_555 ? 21 AC2 11 AS B 4 ? AS B 10 . ? 1_555 ? 22 AC2 11 HOH F . ? HOH B 56 . ? 1_455 ? 23 AC2 11 HOH F . ? HOH B 75 . ? 1_555 ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 C24 _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 NGM _pdbx_validate_symm_contact.auth_seq_id_1 13 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 52 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_445 _pdbx_validate_symm_contact.dist 1.99 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 "C5'" A DG 2 ? ? "C4'" A DG 2 ? ? 1.559 1.512 0.047 0.007 N 2 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? 1.538 1.420 0.118 0.011 N 3 1 C6 A DG 2 ? ? N1 A DG 2 ? ? 1.344 1.391 -0.047 0.007 N 4 1 "O3'" A DG 2 ? ? P A DT 3 ? ? 1.685 1.607 0.078 0.012 Y 5 1 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? 1.524 1.420 0.104 0.011 N 6 1 C4 A DT 3 ? ? O4 A DT 3 ? ? 1.282 1.228 0.054 0.009 N 7 1 "O3'" A AS 4 ? ? P A 5CM 5 ? ? 1.743 1.607 0.136 0.012 Y 8 1 P A DG 6 ? ? OP2 A DG 6 ? ? 1.607 1.485 0.122 0.017 N 9 1 "O5'" A DG 6 ? ? "C5'" A DG 6 ? ? 1.543 1.440 0.103 0.016 N 10 1 "O4'" B DT 9 ? ? "C1'" B DT 9 ? ? 1.508 1.420 0.088 0.011 N 11 1 "O3'" B DT 9 ? ? "C3'" B DT 9 ? ? 1.381 1.419 -0.038 0.006 N 12 1 C2 B DT 9 ? ? N3 B DT 9 ? ? 1.316 1.373 -0.057 0.008 N 13 1 C4 B DT 9 ? ? C5 B DT 9 ? ? 1.385 1.445 -0.060 0.009 N 14 1 C4 B DT 9 ? ? O4 B DT 9 ? ? 1.286 1.228 0.058 0.009 N 15 1 "O3'" B DT 9 ? ? P B AS 10 ? ? 1.487 1.607 -0.120 0.012 Y 16 1 P B DG 12 ? ? "O5'" B DG 12 ? ? 1.708 1.593 0.115 0.010 N 17 1 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? 1.590 1.420 0.170 0.011 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C3'" A 5CM 1 ? ? "O3'" A 5CM 1 ? ? P A DG 2 ? ? 130.00 119.70 10.30 1.20 Y 2 1 "O3'" A 5CM 1 ? ? P A DG 2 ? ? "O5'" A DG 2 ? ? 89.31 104.00 -14.69 1.90 Y 3 1 "O5'" A DG 2 ? ? P A DG 2 ? ? OP2 A DG 2 ? ? 126.38 110.70 15.68 1.20 N 4 1 "O5'" A DG 2 ? ? "C5'" A DG 2 ? ? "C4'" A DG 2 ? ? 97.73 109.40 -11.67 0.80 N 5 1 P A DG 2 ? ? "O5'" A DG 2 ? ? "C5'" A DG 2 ? ? 160.30 120.90 39.40 1.60 N 6 1 "C1'" A DG 2 ? ? "O4'" A DG 2 ? ? "C4'" A DG 2 ? ? 100.26 110.10 -9.84 1.00 N 7 1 "C3'" A DG 2 ? ? "C2'" A DG 2 ? ? "C1'" A DG 2 ? ? 91.78 102.40 -10.62 0.80 N 8 1 "O4'" A DG 2 ? ? "C1'" A DG 2 ? ? "C2'" A DG 2 ? ? 93.39 105.90 -12.51 0.80 N 9 1 C6 A DG 2 ? ? N1 A DG 2 ? ? C2 A DG 2 ? ? 120.22 125.10 -4.88 0.60 N 10 1 N1 A DG 2 ? ? C2 A DG 2 ? ? N3 A DG 2 ? ? 128.68 123.90 4.78 0.60 N 11 1 N3 A DG 2 ? ? C4 A DG 2 ? ? C5 A DG 2 ? ? 124.52 128.60 -4.08 0.50 N 12 1 N3 A DG 2 ? ? C4 A DG 2 ? ? N9 A DG 2 ? ? 130.71 126.00 4.71 0.60 N 13 1 N1 A DG 2 ? ? C6 A DG 2 ? ? O6 A DG 2 ? ? 125.13 119.90 5.23 0.60 N 14 1 C5 A DG 2 ? ? C6 A DG 2 ? ? O6 A DG 2 ? ? 121.18 128.60 -7.42 0.60 N 15 1 "C3'" A DG 2 ? ? "O3'" A DG 2 ? ? P A DT 3 ? ? 134.13 119.70 14.43 1.20 Y 16 1 "O5'" A DT 3 ? ? P A DT 3 ? ? OP2 A DT 3 ? ? 119.88 110.70 9.18 1.20 N 17 1 "O5'" A DT 3 ? ? "C5'" A DT 3 ? ? "C4'" A DT 3 ? ? 102.20 109.40 -7.20 0.80 N 18 1 P A DT 3 ? ? "O5'" A DT 3 ? ? "C5'" A DT 3 ? ? 139.51 120.90 18.61 1.60 N 19 1 "C5'" A DT 3 ? ? "C4'" A DT 3 ? ? "O4'" A DT 3 ? ? 116.77 109.80 6.97 1.10 N 20 1 "C1'" A DT 3 ? ? "O4'" A DT 3 ? ? "C4'" A DT 3 ? ? 101.69 110.10 -8.41 1.00 N 21 1 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? "C2'" A DT 3 ? ? 94.04 105.90 -11.86 0.80 N 22 1 "O4'" A DT 3 ? ? "C1'" A DT 3 ? ? N1 A DT 3 ? ? 102.72 108.00 -5.28 0.70 N 23 1 N1 A DT 3 ? ? C2 A DT 3 ? ? N3 A DT 3 ? ? 118.29 114.60 3.69 0.60 N 24 1 C2 A DT 3 ? ? N3 A DT 3 ? ? C4 A DT 3 ? ? 121.71 127.20 -5.49 0.60 N 25 1 N3 A DT 3 ? ? C4 A DT 3 ? ? O4 A DT 3 ? ? 115.81 119.90 -4.09 0.60 N 26 1 C4 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 124.84 119.00 5.84 0.60 N 27 1 C6 A DT 3 ? ? C5 A DT 3 ? ? C7 A DT 3 ? ? 115.76 122.90 -7.14 0.60 N 28 1 "C3'" A DT 3 ? ? "O3'" A DT 3 ? ? P A AS 4 ? ? 134.51 119.70 14.81 1.20 Y 29 1 "C3'" A 5CM 5 ? ? "O3'" A 5CM 5 ? ? P A DG 6 ? ? 143.09 119.70 23.39 1.20 Y 30 1 "O3'" A 5CM 5 ? ? P A DG 6 ? ? OP2 A DG 6 ? ? 86.50 105.20 -18.70 2.20 Y 31 1 "O3'" A 5CM 5 ? ? P A DG 6 ? ? OP1 A DG 6 ? ? 120.20 110.50 9.70 1.10 Y 32 1 P A DG 6 ? ? "O5'" A DG 6 ? ? "C5'" A DG 6 ? ? 102.45 120.90 -18.45 1.60 N 33 1 "C1'" A DG 6 ? ? "O4'" A DG 6 ? ? "C4'" A DG 6 ? ? 115.14 110.30 4.84 0.70 N 34 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 110.34 108.30 2.04 0.30 N 35 1 C6 A DG 6 ? ? N1 A DG 6 ? ? C2 A DG 6 ? ? 119.77 125.10 -5.33 0.60 N 36 1 C5 A DG 6 ? ? C6 A DG 6 ? ? N1 A DG 6 ? ? 116.77 111.50 5.27 0.50 N 37 1 C4 A DG 6 ? ? C5 A DG 6 ? ? N7 A DG 6 ? ? 108.18 110.80 -2.62 0.40 N 38 1 C6 A DG 6 ? ? C5 A DG 6 ? ? N7 A DG 6 ? ? 134.72 130.40 4.32 0.60 N 39 1 N1 A DG 6 ? ? C2 A DG 6 ? ? N2 A DG 6 ? ? 122.85 116.20 6.65 0.90 N 40 1 N3 A DG 6 ? ? C2 A DG 6 ? ? N2 A DG 6 ? ? 110.38 119.90 -9.52 0.70 N 41 1 C5 A DG 6 ? ? C6 A DG 6 ? ? O6 A DG 6 ? ? 123.91 128.60 -4.69 0.60 N 42 1 "O5'" B DG 8 ? ? P B DG 8 ? ? OP1 B DG 8 ? ? 98.19 105.70 -7.51 0.90 N 43 1 "O5'" B DG 8 ? ? "C5'" B DG 8 ? ? "C4'" B DG 8 ? ? 102.71 109.40 -6.69 0.80 N 44 1 P B DG 8 ? ? "O5'" B DG 8 ? ? "C5'" B DG 8 ? ? 107.72 120.90 -13.18 1.60 N 45 1 "O4'" B DG 8 ? ? "C4'" B DG 8 ? ? "C3'" B DG 8 ? ? 110.16 106.00 4.16 0.60 N 46 1 "O4'" B DG 8 ? ? "C1'" B DG 8 ? ? N9 B DG 8 ? ? 110.57 108.30 2.27 0.30 N 47 1 "C3'" B DG 8 ? ? "O3'" B DG 8 ? ? P B DT 9 ? ? 127.34 119.70 7.64 1.20 Y 48 1 "O5'" B DT 9 ? ? P B DT 9 ? ? OP2 B DT 9 ? ? 126.57 110.70 15.87 1.20 N 49 1 "C5'" B DT 9 ? ? "C4'" B DT 9 ? ? "O4'" B DT 9 ? ? 117.53 109.80 7.73 1.10 N 50 1 "C4'" B DT 9 ? ? "C3'" B DT 9 ? ? "C2'" B DT 9 ? ? 108.89 103.10 5.79 0.90 N 51 1 C6 B DT 9 ? ? N1 B DT 9 ? ? C2 B DT 9 ? ? 116.93 121.30 -4.37 0.50 N 52 1 N1 B DT 9 ? ? C2 B DT 9 ? ? N3 B DT 9 ? ? 118.59 114.60 3.99 0.60 N 53 1 C6 B DT 9 ? ? C5 B DT 9 ? ? C7 B DT 9 ? ? 119.28 122.90 -3.62 0.60 N 54 1 "C3'" B DT 9 ? ? "O3'" B DT 9 ? ? P B AS 10 ? ? 135.12 119.70 15.42 1.20 Y 55 1 "O3'" B 5CM 11 ? ? P B DG 12 ? ? OP1 B DG 12 ? ? 118.64 110.50 8.14 1.10 Y 56 1 OP1 B DG 12 ? ? P B DG 12 ? ? OP2 B DG 12 ? ? 95.98 119.60 -23.62 1.50 N 57 1 "O5'" B DG 12 ? ? P B DG 12 ? ? OP1 B DG 12 ? ? 126.07 110.70 15.37 1.20 N 58 1 "O5'" B DG 12 ? ? "C5'" B DG 12 ? ? "C4'" B DG 12 ? ? 102.92 109.40 -6.48 0.80 N 59 1 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? "C2'" B DG 12 ? ? 96.30 105.90 -9.60 0.80 N 60 1 "O4'" B DG 12 ? ? "C1'" B DG 12 ? ? N9 B DG 12 ? ? 99.35 108.00 -8.65 0.70 N 61 1 N1 B DG 12 ? ? C2 B DG 12 ? ? N3 B DG 12 ? ? 128.59 123.90 4.69 0.60 N 62 1 C2 B DG 12 ? ? N3 B DG 12 ? ? C4 B DG 12 ? ? 108.77 111.90 -3.13 0.50 N # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A 5CM 1 A 5CM 1 ? DC ? 2 A AS 4 A AS 4 ? DA ? 3 A 5CM 5 A 5CM 5 ? DC ? 4 B 5CM 1 B 5CM 7 ? DC ? 5 B AS 4 B AS 10 ? DA ? 6 B 5CM 5 B 5CM 11 ? DC ? # _struct_site_keywords.site_id 1 _struct_site_keywords.text INTERCALATION # loop_ _refine_B_iso.class _refine_B_iso.details _refine_B_iso.treatment _refine_B_iso.pdbx_refine_id 'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION' 'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' # loop_ _refine_occupancy.class _refine_occupancy.treatment _refine_occupancy.pdbx_refine_id 'ALL ATOMS' fix 'X-RAY DIFFRACTION' 'ALL WATERS' fix 'X-RAY DIFFRACTION' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 AS P P N N 38 AS OP1 O N N 39 AS S2P S N N 40 AS OP3 O N N 41 AS "O5'" O N N 42 AS "C5'" C N N 43 AS "C4'" C N R 44 AS "O4'" O N N 45 AS "C3'" C N S 46 AS "O3'" O N N 47 AS "C2'" C N N 48 AS "C1'" C N R 49 AS N9 N Y N 50 AS C8 C Y N 51 AS N7 N Y N 52 AS C5 C Y N 53 AS C6 C Y N 54 AS N6 N N N 55 AS N1 N Y N 56 AS C2 C Y N 57 AS N3 N Y N 58 AS C4 C Y N 59 AS HOP1 H N N 60 AS HOP3 H N N 61 AS "H5'" H N N 62 AS "H5''" H N N 63 AS "H4'" H N N 64 AS "H3'" H N N 65 AS "HO3'" H N N 66 AS "H2'" H N N 67 AS "H2''" H N N 68 AS "H1'" H N N 69 AS H8 H N N 70 AS HN61 H N N 71 AS HN62 H N N 72 AS H2 H N N 73 DG OP3 O N N 74 DG P P N N 75 DG OP1 O N N 76 DG OP2 O N N 77 DG "O5'" O N N 78 DG "C5'" C N N 79 DG "C4'" C N R 80 DG "O4'" O N N 81 DG "C3'" C N S 82 DG "O3'" O N N 83 DG "C2'" C N N 84 DG "C1'" C N R 85 DG N9 N Y N 86 DG C8 C Y N 87 DG N7 N Y N 88 DG C5 C Y N 89 DG C6 C N N 90 DG O6 O N N 91 DG N1 N N N 92 DG C2 C N N 93 DG N2 N N N 94 DG N3 N N N 95 DG C4 C Y N 96 DG HOP3 H N N 97 DG HOP2 H N N 98 DG "H5'" H N N 99 DG "H5''" H N N 100 DG "H4'" H N N 101 DG "H3'" H N N 102 DG "HO3'" H N N 103 DG "H2'" H N N 104 DG "H2''" H N N 105 DG "H1'" H N N 106 DG H8 H N N 107 DG H1 H N N 108 DG H21 H N N 109 DG H22 H N N 110 DT OP3 O N N 111 DT P P N N 112 DT OP1 O N N 113 DT OP2 O N N 114 DT "O5'" O N N 115 DT "C5'" C N N 116 DT "C4'" C N R 117 DT "O4'" O N N 118 DT "C3'" C N S 119 DT "O3'" O N N 120 DT "C2'" C N N 121 DT "C1'" C N R 122 DT N1 N N N 123 DT C2 C N N 124 DT O2 O N N 125 DT N3 N N N 126 DT C4 C N N 127 DT O4 O N N 128 DT C5 C N N 129 DT C7 C N N 130 DT C6 C N N 131 DT HOP3 H N N 132 DT HOP2 H N N 133 DT "H5'" H N N 134 DT "H5''" H N N 135 DT "H4'" H N N 136 DT "H3'" H N N 137 DT "HO3'" H N N 138 DT "H2'" H N N 139 DT "H2''" H N N 140 DT "H1'" H N N 141 DT H3 H N N 142 DT H71 H N N 143 DT H72 H N N 144 DT H73 H N N 145 DT H6 H N N 146 HOH O O N N 147 HOH H1 H N N 148 HOH H2 H N N 149 NGM C1 C Y N 150 NGM C2 C Y N 151 NGM C3 C Y N 152 NGM C4 C Y N 153 NGM C5 C N N 154 NGM C6 C Y N 155 NGM C7 C N S 156 NGM C8 C N N 157 NGM C9 C N S 158 NGM C10 C N R 159 NGM C11 C Y N 160 NGM C12 C N N 161 NGM C13 C N N 162 NGM C14 C N N 163 NGM C15 C N N 164 NGM C16 C Y N 165 NGM C17 C Y N 166 NGM C18 C Y N 167 NGM C19 C Y N 168 NGM C20 C Y N 169 NGM C21 C Y N 170 NGM C22 C N N 171 NGM C23 C N N 172 NGM C24 C N N 173 NGM C25 C N N 174 NGM C26 C N N 175 NGM C27 C N N 176 NGM C28 C N N 177 NGM C29 C N N 178 NGM C30 C N S 179 NGM C31 C N S 180 NGM C32 C N R 181 NGM C33 C N R 182 NGM C34 C N R 183 NGM "C1'" C N R 184 NGM "C2'" C N R 185 NGM "C3'" C N R 186 NGM "C4'" C N S 187 NGM "C5'" C N S 188 NGM N1 N N N 189 NGM O1 O N N 190 NGM O2 O N N 191 NGM O4 O N N 192 NGM O5 O N N 193 NGM O6 O N N 194 NGM O7 O N N 195 NGM O9 O N N 196 NGM O10 O N N 197 NGM O14 O N N 198 NGM O12 O N N 199 NGM O15 O N N 200 NGM O16 O N N 201 NGM "O1'" O N N 202 NGM "O2'" O N N 203 NGM "O3'" O N N 204 NGM "O4'" O N N 205 NGM H3 H N N 206 NGM H7 H N N 207 NGM H81 H N N 208 NGM H82 H N N 209 NGM H10 H N N 210 NGM H11 H N N 211 NGM H131 H N N 212 NGM H132 H N N 213 NGM H133 H N N 214 NGM H151 H N N 215 NGM H152 H N N 216 NGM H153 H N N 217 NGM H221 H N N 218 NGM H222 H N N 219 NGM H223 H N N 220 NGM H231 H N N 221 NGM H232 H N N 222 NGM H233 H N N 223 NGM H241 H N N 224 NGM H242 H N N 225 NGM H243 H N N 226 NGM H251 H N N 227 NGM H252 H N N 228 NGM H253 H N N 229 NGM H261 H N N 230 NGM H262 H N N 231 NGM H263 H N N 232 NGM H271 H N N 233 NGM H272 H N N 234 NGM H273 H N N 235 NGM H281 H N N 236 NGM H282 H N N 237 NGM H283 H N N 238 NGM H291 H N N 239 NGM H292 H N N 240 NGM H293 H N N 241 NGM H30 H N N 242 NGM H31 H N N 243 NGM H32 H N N 244 NGM H33 H N N 245 NGM "H1'" H N N 246 NGM "H2'" H N N 247 NGM "H4'" H N N 248 NGM "H5'" H N N 249 NGM HO4 H N N 250 NGM HO6 H N N 251 NGM HO9 H N N 252 NGM H15 H N N 253 NGM H16 H N N 254 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 AS P OP1 sing N N 39 AS P S2P doub N N 40 AS P OP3 sing N N 41 AS P "O5'" sing N N 42 AS OP1 HOP1 sing N N 43 AS OP3 HOP3 sing N N 44 AS "O5'" "C5'" sing N N 45 AS "C5'" "C4'" sing N N 46 AS "C5'" "H5'" sing N N 47 AS "C5'" "H5''" sing N N 48 AS "C4'" "O4'" sing N N 49 AS "C4'" "C3'" sing N N 50 AS "C4'" "H4'" sing N N 51 AS "O4'" "C1'" sing N N 52 AS "C3'" "O3'" sing N N 53 AS "C3'" "C2'" sing N N 54 AS "C3'" "H3'" sing N N 55 AS "O3'" "HO3'" sing N N 56 AS "C2'" "C1'" sing N N 57 AS "C2'" "H2'" sing N N 58 AS "C2'" "H2''" sing N N 59 AS "C1'" N9 sing N N 60 AS "C1'" "H1'" sing N N 61 AS N9 C8 sing Y N 62 AS N9 C4 sing Y N 63 AS C8 N7 doub Y N 64 AS C8 H8 sing N N 65 AS N7 C5 sing Y N 66 AS C5 C6 sing Y N 67 AS C5 C4 doub Y N 68 AS C6 N6 sing N N 69 AS C6 N1 doub Y N 70 AS N6 HN61 sing N N 71 AS N6 HN62 sing N N 72 AS N1 C2 sing Y N 73 AS C2 N3 doub Y N 74 AS C2 H2 sing N N 75 AS N3 C4 sing Y N 76 DG OP3 P sing N N 77 DG OP3 HOP3 sing N N 78 DG P OP1 doub N N 79 DG P OP2 sing N N 80 DG P "O5'" sing N N 81 DG OP2 HOP2 sing N N 82 DG "O5'" "C5'" sing N N 83 DG "C5'" "C4'" sing N N 84 DG "C5'" "H5'" sing N N 85 DG "C5'" "H5''" sing N N 86 DG "C4'" "O4'" sing N N 87 DG "C4'" "C3'" sing N N 88 DG "C4'" "H4'" sing N N 89 DG "O4'" "C1'" sing N N 90 DG "C3'" "O3'" sing N N 91 DG "C3'" "C2'" sing N N 92 DG "C3'" "H3'" sing N N 93 DG "O3'" "HO3'" sing N N 94 DG "C2'" "C1'" sing N N 95 DG "C2'" "H2'" sing N N 96 DG "C2'" "H2''" sing N N 97 DG "C1'" N9 sing N N 98 DG "C1'" "H1'" sing N N 99 DG N9 C8 sing Y N 100 DG N9 C4 sing Y N 101 DG C8 N7 doub Y N 102 DG C8 H8 sing N N 103 DG N7 C5 sing Y N 104 DG C5 C6 sing N N 105 DG C5 C4 doub Y N 106 DG C6 O6 doub N N 107 DG C6 N1 sing N N 108 DG N1 C2 sing N N 109 DG N1 H1 sing N N 110 DG C2 N2 sing N N 111 DG C2 N3 doub N N 112 DG N2 H21 sing N N 113 DG N2 H22 sing N N 114 DG N3 C4 sing N N 115 DT OP3 P sing N N 116 DT OP3 HOP3 sing N N 117 DT P OP1 doub N N 118 DT P OP2 sing N N 119 DT P "O5'" sing N N 120 DT OP2 HOP2 sing N N 121 DT "O5'" "C5'" sing N N 122 DT "C5'" "C4'" sing N N 123 DT "C5'" "H5'" sing N N 124 DT "C5'" "H5''" sing N N 125 DT "C4'" "O4'" sing N N 126 DT "C4'" "C3'" sing N N 127 DT "C4'" "H4'" sing N N 128 DT "O4'" "C1'" sing N N 129 DT "C3'" "O3'" sing N N 130 DT "C3'" "C2'" sing N N 131 DT "C3'" "H3'" sing N N 132 DT "O3'" "HO3'" sing N N 133 DT "C2'" "C1'" sing N N 134 DT "C2'" "H2'" sing N N 135 DT "C2'" "H2''" sing N N 136 DT "C1'" N1 sing N N 137 DT "C1'" "H1'" sing N N 138 DT N1 C2 sing N N 139 DT N1 C6 sing N N 140 DT C2 O2 doub N N 141 DT C2 N3 sing N N 142 DT N3 C4 sing N N 143 DT N3 H3 sing N N 144 DT C4 O4 doub N N 145 DT C4 C5 sing N N 146 DT C5 C7 sing N N 147 DT C5 C6 doub N N 148 DT C7 H71 sing N N 149 DT C7 H72 sing N N 150 DT C7 H73 sing N N 151 DT C6 H6 sing N N 152 HOH O H1 sing N N 153 HOH O H2 sing N N 154 NGM C1 C2 doub Y N 155 NGM C1 C16 sing Y N 156 NGM C1 O1 sing N N 157 NGM C2 C3 sing Y N 158 NGM C2 C34 sing N N 159 NGM C3 C4 doub Y N 160 NGM C3 H3 sing N N 161 NGM C4 C17 sing Y N 162 NGM C4 O4 sing N N 163 NGM C5 C17 sing N N 164 NGM C5 C18 sing N N 165 NGM C5 O5 doub N N 166 NGM C6 C18 doub Y N 167 NGM C6 C19 sing Y N 168 NGM C6 O6 sing N N 169 NGM C7 C8 sing N N 170 NGM C7 C19 sing N N 171 NGM C7 O7 sing N N 172 NGM C7 H7 sing N N 173 NGM C8 C9 sing N N 174 NGM C8 H81 sing N N 175 NGM C8 H82 sing N N 176 NGM C9 C10 sing N N 177 NGM C9 C13 sing N N 178 NGM C9 O9 sing N N 179 NGM C10 C14 sing N N 180 NGM C10 C20 sing N N 181 NGM C10 H10 sing N N 182 NGM C11 C20 sing Y N 183 NGM C11 C21 doub Y N 184 NGM C11 H11 sing N N 185 NGM C12 C16 sing N N 186 NGM C12 C21 sing N N 187 NGM C12 O12 doub N N 188 NGM C13 H131 sing N N 189 NGM C13 H132 sing N N 190 NGM C13 H133 sing N N 191 NGM C14 O10 sing N N 192 NGM C14 O14 doub N N 193 NGM C15 O10 sing N N 194 NGM C15 H151 sing N N 195 NGM C15 H152 sing N N 196 NGM C15 H153 sing N N 197 NGM C16 C17 doub Y N 198 NGM C18 C21 sing Y N 199 NGM C19 C20 doub Y N 200 NGM C22 C34 sing N N 201 NGM C22 H221 sing N N 202 NGM C22 H222 sing N N 203 NGM C22 H223 sing N N 204 NGM C23 N1 sing N N 205 NGM C23 H231 sing N N 206 NGM C23 H232 sing N N 207 NGM C23 H233 sing N N 208 NGM C24 N1 sing N N 209 NGM C24 H241 sing N N 210 NGM C24 H242 sing N N 211 NGM C24 H243 sing N N 212 NGM C25 "C5'" sing N N 213 NGM C25 H251 sing N N 214 NGM C25 H252 sing N N 215 NGM C25 H253 sing N N 216 NGM C26 "O4'" sing N N 217 NGM C26 H261 sing N N 218 NGM C26 H262 sing N N 219 NGM C26 H263 sing N N 220 NGM C27 "O3'" sing N N 221 NGM C27 H271 sing N N 222 NGM C27 H272 sing N N 223 NGM C27 H273 sing N N 224 NGM C28 "C3'" sing N N 225 NGM C28 H281 sing N N 226 NGM C28 H282 sing N N 227 NGM C28 H283 sing N N 228 NGM C29 "O2'" sing N N 229 NGM C29 H291 sing N N 230 NGM C29 H292 sing N N 231 NGM C29 H293 sing N N 232 NGM C30 C31 sing N N 233 NGM C30 O1 sing N N 234 NGM C30 O2 sing N N 235 NGM C30 H30 sing N N 236 NGM C31 C32 sing N N 237 NGM C31 O15 sing N N 238 NGM C31 H31 sing N N 239 NGM C32 C33 sing N N 240 NGM C32 N1 sing N N 241 NGM C32 H32 sing N N 242 NGM C33 C34 sing N N 243 NGM C33 O16 sing N N 244 NGM C33 H33 sing N N 245 NGM C34 O2 sing N N 246 NGM "C1'" "C2'" sing N N 247 NGM "C1'" O7 sing N N 248 NGM "C1'" "O1'" sing N N 249 NGM "C1'" "H1'" sing N N 250 NGM "C2'" "C3'" sing N N 251 NGM "C2'" "O2'" sing N N 252 NGM "C2'" "H2'" sing N N 253 NGM "C3'" "C4'" sing N N 254 NGM "C3'" "O3'" sing N N 255 NGM "C4'" "C5'" sing N N 256 NGM "C4'" "O4'" sing N N 257 NGM "C4'" "H4'" sing N N 258 NGM "C5'" "O1'" sing N N 259 NGM "C5'" "H5'" sing N N 260 NGM O4 HO4 sing N N 261 NGM O6 HO6 sing N N 262 NGM O9 HO9 sing N N 263 NGM O15 H15 sing N N 264 NGM O16 H16 sing N N 265 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 1D21 'double helix' 1D21 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A 5CM 1 1_555 B DG 6 1_555 0.444 -0.412 0.206 5.616 5.074 1.895 1 A_5CM1:DG12_B A 1 ? B 12 ? 19 1 1 A DG 2 1_555 B 5CM 5 1_555 -0.546 -0.398 -0.416 -15.191 4.512 -2.125 2 A_DG2:5CM11_B A 2 ? B 11 ? 19 1 1 A DT 3 1_555 B AS 4 1_555 0.147 -0.188 0.063 -3.478 -2.855 -2.992 3 A_DT3:AS10_B A 3 ? B 10 ? 20 1 1 A AS 4 1_555 B DT 3 1_555 0.293 -0.299 0.274 3.181 -5.214 4.618 4 A_AS4:DT9_B A 4 ? B 9 ? 20 1 1 A 5CM 5 1_555 B DG 2 1_555 0.057 -0.371 -0.100 18.650 5.246 -5.239 5 A_5CM5:DG8_B A 5 ? B 8 ? 19 1 1 A DG 6 1_555 B 5CM 1 1_555 0.017 -0.374 0.102 -6.957 7.249 -0.846 6 A_DG6:5CM7_B A 6 ? B 7 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A 5CM 1 1_555 B DG 6 1_555 A DG 2 1_555 B 5CM 5 1_555 0.327 0.051 6.791 7.554 -0.663 30.673 0.350 2.329 6.677 -1.229 -14.013 31.575 1 AA_5CM1DG2:5CM11DG12_BB A 1 ? B 12 ? A 2 ? B 11 ? 1 A DG 2 1_555 B 5CM 5 1_555 A DT 3 1_555 B AS 4 1_555 -0.797 -0.294 3.098 -4.194 2.975 31.313 -1.062 0.718 3.135 5.466 7.705 31.722 2 AA_DG2DT3:AS105CM11_BB A 2 ? B 11 ? A 3 ? B 10 ? 1 A DT 3 1_555 B AS 4 1_555 A AS 4 1_555 B DT 3 1_555 0.166 -0.981 3.185 -1.933 0.066 33.240 -1.724 -0.603 3.168 0.115 3.376 33.294 3 AA_DT3AS4:DT9AS10_BB A 3 ? B 10 ? A 4 ? B 9 ? 1 A AS 4 1_555 B DT 3 1_555 A 5CM 5 1_555 B DG 2 1_555 0.176 -0.326 3.081 3.397 -0.332 25.455 -0.646 0.509 3.081 -0.749 -7.666 25.679 4 AA_AS45CM5:DG8DT9_BB A 4 ? B 9 ? A 5 ? B 8 ? 1 A 5CM 5 1_555 B DG 2 1_555 A DG 6 1_555 B 5CM 1 1_555 -0.527 0.456 6.915 -5.809 -1.077 38.478 0.962 -0.707 6.904 -1.623 8.751 38.912 5 AA_5CM5DG6:5CM7DG8_BB A 5 ? B 8 ? A 6 ? B 7 ? # _atom_sites.entry_id 1D21 _atom_sites.fract_transf_matrix[1][1] 0.038008 _atom_sites.fract_transf_matrix[1][2] 0.021944 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.043888 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009975 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 . 5CM A 1 1 ? 11.634 1.786 27.110 1.00 21.31 ? 1 5CM A N1 1 HETATM 2 C C2 . 5CM A 1 1 ? 11.676 3.181 27.020 1.00 20.62 ? 1 5CM A C2 1 HETATM 3 N N3 . 5CM A 1 1 ? 11.634 3.664 25.777 1.00 19.84 ? 1 5CM A N3 1 HETATM 4 C C4 . 5CM A 1 1 ? 11.565 2.914 24.674 1.00 19.59 ? 1 5CM A C4 1 HETATM 5 C C5 . 5CM A 1 1 ? 11.618 1.540 24.774 1.00 19.96 ? 1 5CM A C5 1 HETATM 6 C C5A . 5CM A 1 1 ? 11.550 0.652 23.541 1.00 20.58 ? 1 5CM A C5A 1 HETATM 7 C C6 . 5CM A 1 1 ? 11.643 0.977 26.007 1.00 20.63 ? 1 5CM A C6 1 HETATM 8 O O2 . 5CM A 1 1 ? 11.709 3.753 28.143 1.00 20.29 ? 1 5CM A O2 1 HETATM 9 N N4 . 5CM A 1 1 ? 11.557 3.534 23.511 1.00 18.79 ? 1 5CM A N4 1 HETATM 10 C "C1'" . 5CM A 1 1 ? 11.772 1.356 28.514 1.00 22.54 ? 1 5CM A "C1'" 1 HETATM 11 C "C2'" . 5CM A 1 1 ? 10.671 1.586 29.446 1.00 23.56 ? 1 5CM A "C2'" 1 HETATM 12 C "C3'" . 5CM A 1 1 ? 10.346 0.125 29.837 1.00 24.35 ? 1 5CM A "C3'" 1 HETATM 13 C "C4'" . 5CM A 1 1 ? 11.834 -0.342 29.918 1.00 24.46 ? 1 5CM A "C4'" 1 HETATM 14 O "O4'" . 5CM A 1 1 ? 12.064 -0.039 28.504 1.00 23.69 ? 1 5CM A "O4'" 1 HETATM 15 O "O3'" . 5CM A 1 1 ? 9.743 0.096 31.091 1.00 25.33 ? 1 5CM A "O3'" 1 HETATM 16 C "C5'" . 5CM A 1 1 ? 12.189 -1.795 30.008 1.00 24.68 ? 1 5CM A "C5'" 1 HETATM 17 O "O5'" . 5CM A 1 1 ? 11.338 -2.427 28.985 1.00 25.92 ? 1 5CM A "O5'" 1 ATOM 18 P P . DG A 1 2 ? 8.197 -0.207 31.502 1.00 30.35 ? 2 DG A P 1 ATOM 19 O OP1 . DG A 1 2 ? 8.421 -1.137 32.725 1.00 29.13 ? 2 DG A OP1 1 ATOM 20 O OP2 . DG A 1 2 ? 7.390 -0.679 30.359 1.00 30.84 ? 2 DG A OP2 1 ATOM 21 O "O5'" . DG A 1 2 ? 8.119 1.203 32.173 1.00 23.18 ? 2 DG A "O5'" 1 ATOM 22 C "C5'" . DG A 1 2 ? 8.528 2.418 32.765 1.00 21.12 ? 2 DG A "C5'" 1 ATOM 23 C "C4'" . DG A 1 2 ? 7.273 3.265 32.394 1.00 20.81 ? 2 DG A "C4'" 1 ATOM 24 O "O4'" . DG A 1 2 ? 7.306 3.445 30.990 1.00 19.96 ? 2 DG A "O4'" 1 ATOM 25 C "C3'" . DG A 1 2 ? 5.934 2.572 32.715 1.00 20.44 ? 2 DG A "C3'" 1 ATOM 26 O "O3'" . DG A 1 2 ? 4.856 3.402 33.166 1.00 21.74 ? 2 DG A "O3'" 1 ATOM 27 C "C2'" . DG A 1 2 ? 5.565 2.055 31.311 1.00 19.62 ? 2 DG A "C2'" 1 ATOM 28 C "C1'" . DG A 1 2 ? 5.800 3.457 30.680 1.00 18.64 ? 2 DG A "C1'" 1 ATOM 29 N N9 . DG A 1 2 ? 5.603 3.429 29.246 1.00 17.07 ? 2 DG A N9 1 ATOM 30 C C8 . DG A 1 2 ? 5.637 2.267 28.514 1.00 16.71 ? 2 DG A C8 1 ATOM 31 N N7 . DG A 1 2 ? 5.529 2.518 27.251 1.00 16.78 ? 2 DG A N7 1 ATOM 32 C C5 . DG A 1 2 ? 5.403 3.894 27.120 1.00 16.03 ? 2 DG A C5 1 ATOM 33 C C6 . DG A 1 2 ? 5.248 4.682 25.937 1.00 15.94 ? 2 DG A C6 1 ATOM 34 O O6 . DG A 1 2 ? 5.183 4.133 24.774 1.00 15.75 ? 2 DG A O6 1 ATOM 35 N N1 . DG A 1 2 ? 5.254 6.006 26.168 1.00 15.30 ? 2 DG A N1 1 ATOM 36 C C2 . DG A 1 2 ? 5.363 6.487 27.461 1.00 15.12 ? 2 DG A C2 1 ATOM 37 N N2 . DG A 1 2 ? 5.283 7.811 27.521 1.00 14.89 ? 2 DG A N2 1 ATOM 38 N N3 . DG A 1 2 ? 5.492 5.803 28.594 1.00 15.38 ? 2 DG A N3 1 ATOM 39 C C4 . DG A 1 2 ? 5.487 4.482 28.374 1.00 16.43 ? 2 DG A C4 1 ATOM 40 P P . DT A 1 3 ? 4.329 3.921 34.680 1.00 28.73 ? 3 DT A P 1 ATOM 41 O OP1 . DT A 1 3 ? 5.544 3.965 35.632 1.00 29.74 ? 3 DT A OP1 1 ATOM 42 O OP2 . DT A 1 3 ? 3.422 2.846 34.951 1.00 25.60 ? 3 DT A OP2 1 ATOM 43 O "O5'" . DT A 1 3 ? 3.789 5.386 34.560 1.00 20.26 ? 3 DT A "O5'" 1 ATOM 44 C "C5'" . DT A 1 3 ? 4.294 6.744 34.409 1.00 18.44 ? 3 DT A "C5'" 1 ATOM 45 C "C4'" . DT A 1 3 ? 3.465 7.264 33.306 1.00 17.30 ? 3 DT A "C4'" 1 ATOM 46 O "O4'" . DT A 1 3 ? 3.469 6.523 32.103 1.00 16.65 ? 3 DT A "O4'" 1 ATOM 47 C "C3'" . DT A 1 3 ? 1.990 7.572 33.527 1.00 17.07 ? 3 DT A "C3'" 1 ATOM 48 O "O3'" . DT A 1 3 ? 1.917 9.016 33.627 1.00 18.05 ? 3 DT A "O3'" 1 ATOM 49 C "C2'" . DT A 1 3 ? 1.319 7.116 32.224 1.00 16.56 ? 3 DT A "C2'" 1 ATOM 50 C "C1'" . DT A 1 3 ? 2.482 7.312 31.251 1.00 15.58 ? 3 DT A "C1'" 1 ATOM 51 N N1 . DT A 1 3 ? 2.307 6.462 30.098 1.00 15.00 ? 3 DT A N1 1 ATOM 52 C C2 . DT A 1 3 ? 2.192 7.018 28.845 1.00 14.65 ? 3 DT A C2 1 ATOM 53 O O2 . DT A 1 3 ? 2.167 8.232 28.684 1.00 14.61 ? 3 DT A O2 1 ATOM 54 N N3 . DT A 1 3 ? 2.078 6.179 27.772 1.00 14.42 ? 3 DT A N3 1 ATOM 55 C C4 . DT A 1 3 ? 2.051 4.819 27.922 1.00 14.11 ? 3 DT A C4 1 ATOM 56 O O4 . DT A 1 3 ? 1.938 4.140 26.840 1.00 13.59 ? 3 DT A O4 1 ATOM 57 C C5 . DT A 1 3 ? 2.198 4.290 29.206 1.00 14.25 ? 3 DT A C5 1 ATOM 58 C C7 . DT A 1 3 ? 2.171 2.834 29.537 1.00 14.59 ? 3 DT A C7 1 ATOM 59 C C6 . DT A 1 3 ? 2.302 5.113 30.238 1.00 14.60 ? 3 DT A C6 1 HETATM 60 P P . AS A 1 4 ? 0.775 10.055 34.048 1.00 25.09 ? 4 AS A P 1 HETATM 61 O OP1 . AS A 1 4 ? 1.731 11.160 34.600 1.00 26.31 ? 4 AS A OP1 1 HETATM 62 S S2P . AS A 1 4 ? -0.214 9.244 35.031 1.00 26.47 ? 4 AS A S2P 1 HETATM 63 O "O5'" . AS A 1 4 ? 0.100 10.509 32.775 1.00 16.21 ? 4 AS A "O5'" 1 HETATM 64 C "C5'" . AS A 1 4 ? 0.701 11.468 31.953 1.00 15.06 ? 4 AS A "C5'" 1 HETATM 65 C "C4'" . AS A 1 4 ? 0.046 11.513 30.599 1.00 14.72 ? 4 AS A "C4'" 1 HETATM 66 O "O4'" . AS A 1 4 ? 0.117 10.356 29.837 1.00 13.81 ? 4 AS A "O4'" 1 HETATM 67 C "C3'" . AS A 1 4 ? -1.417 11.946 30.680 1.00 14.75 ? 4 AS A "C3'" 1 HETATM 68 O "O3'" . AS A 1 4 ? -1.605 13.357 30.639 1.00 16.01 ? 4 AS A "O3'" 1 HETATM 69 C "C2'" . AS A 1 4 ? -2.148 10.921 29.948 1.00 14.09 ? 4 AS A "C2'" 1 HETATM 70 C "C1'" . AS A 1 4 ? -1.063 10.422 28.905 1.00 12.91 ? 4 AS A "C1'" 1 HETATM 71 N N9 . AS A 1 4 ? -1.205 9.009 28.544 1.00 11.62 ? 4 AS A N9 1 HETATM 72 C C8 . AS A 1 4 ? -1.209 7.918 29.336 1.00 10.93 ? 4 AS A C8 1 HETATM 73 N N7 . AS A 1 4 ? -1.300 6.795 28.724 1.00 10.62 ? 4 AS A N7 1 HETATM 74 C C5 . AS A 1 4 ? -1.315 7.145 27.361 1.00 10.70 ? 4 AS A C5 1 HETATM 75 C C6 . AS A 1 4 ? -1.415 6.380 26.158 1.00 9.90 ? 4 AS A C6 1 HETATM 76 N N6 . AS A 1 4 ? -1.376 5.067 25.997 1.00 9.82 ? 4 AS A N6 1 HETATM 77 N N1 . AS A 1 4 ? -1.468 7.168 25.115 1.00 10.11 ? 4 AS A N1 1 HETATM 78 C C2 . AS A 1 4 ? -1.493 8.465 25.025 1.00 9.73 ? 4 AS A C2 1 HETATM 79 N N3 . AS A 1 4 ? -1.312 9.253 26.118 1.00 10.78 ? 4 AS A N3 1 HETATM 80 C C4 . AS A 1 4 ? -1.281 8.508 27.241 1.00 10.90 ? 4 AS A C4 1 HETATM 81 N N1 . 5CM A 1 5 ? -5.223 9.779 27.391 1.00 16.54 ? 5 5CM A N1 1 HETATM 82 C C2 . 5CM A 1 5 ? -4.979 9.112 26.198 1.00 15.74 ? 5 5CM A C2 1 HETATM 83 N N3 . 5CM A 1 5 ? -4.790 7.781 26.298 1.00 15.26 ? 5 5CM A N3 1 HETATM 84 C C4 . 5CM A 1 5 ? -4.749 7.109 27.481 1.00 15.45 ? 5 5CM A C4 1 HETATM 85 C C5 . 5CM A 1 5 ? -4.900 7.859 28.704 1.00 15.84 ? 5 5CM A C5 1 HETATM 86 C C5A . 5CM A 1 5 ? -4.783 7.177 30.048 1.00 15.65 ? 5 5CM A C5A 1 HETATM 87 C C6 . 5CM A 1 5 ? -5.111 9.176 28.594 1.00 16.00 ? 5 5CM A C6 1 HETATM 88 O O2 . 5CM A 1 5 ? -4.961 9.732 25.135 1.00 14.99 ? 5 5CM A O2 1 HETATM 89 N N4 . 5CM A 1 5 ? -4.532 5.835 27.551 1.00 15.21 ? 5 5CM A N4 1 HETATM 90 C "C1'" . 5CM A 1 5 ? -5.470 11.206 27.281 1.00 18.14 ? 5 5CM A "C1'" 1 HETATM 91 C "C2'" . 5CM A 1 5 ? -6.671 11.645 28.153 1.00 19.42 ? 5 5CM A "C2'" 1 HETATM 92 C "C3'" . 5CM A 1 5 ? -6.408 13.163 28.253 1.00 19.95 ? 5 5CM A "C3'" 1 HETATM 93 C "C4'" . 5CM A 1 5 ? -5.029 13.423 27.612 1.00 20.07 ? 5 5CM A "C4'" 1 HETATM 94 O "O4'" . 5CM A 1 5 ? -4.403 12.124 27.531 1.00 19.12 ? 5 5CM A "O4'" 1 HETATM 95 O "O3'" . 5CM A 1 5 ? -7.489 13.678 27.441 1.00 21.30 ? 5 5CM A "O3'" 1 HETATM 96 C "C5'" . 5CM A 1 5 ? -4.041 14.346 28.374 1.00 20.53 ? 5 5CM A "C5'" 1 HETATM 97 O "O5'" . 5CM A 1 5 ? -3.973 13.685 29.707 1.00 21.88 ? 5 5CM A "O5'" 1 HETATM 98 P P . 5CM A 1 5 ? -3.201 13.938 31.030 1.00 26.66 ? 5 5CM A P 1 HETATM 99 O OP1 . 5CM A 1 5 ? -3.045 15.268 31.732 1.00 21.84 ? 5 5CM A OP1 1 HETATM 100 O OP2 . 5CM A 1 5 ? -3.764 12.903 32.063 1.00 26.23 ? 5 5CM A OP2 1 ATOM 101 P P . DG A 1 6 ? -8.322 14.979 27.130 1.00 25.68 ? 6 DG A P 1 ATOM 102 O OP1 . DG A 1 6 ? -7.635 16.214 26.659 1.00 24.50 ? 6 DG A OP1 1 ATOM 103 O OP2 . DG A 1 6 ? -9.014 14.760 28.564 1.00 27.89 ? 6 DG A OP2 1 ATOM 104 O "O5'" . DG A 1 6 ? -9.474 14.514 26.108 1.00 22.03 ? 6 DG A "O5'" 1 ATOM 105 C "C5'" . DG A 1 6 ? -8.698 14.350 24.784 1.00 21.93 ? 6 DG A "C5'" 1 ATOM 106 C "C4'" . DG A 1 6 ? -9.727 14.282 23.711 1.00 21.28 ? 6 DG A "C4'" 1 ATOM 107 O "O4'" . DG A 1 6 ? -9.849 13.035 23.070 1.00 20.99 ? 6 DG A "O4'" 1 ATOM 108 C "C3'" . DG A 1 6 ? -11.144 14.735 23.942 1.00 21.21 ? 6 DG A "C3'" 1 ATOM 109 O "O3'" . DG A 1 6 ? -11.474 15.585 22.769 1.00 22.11 ? 6 DG A "O3'" 1 ATOM 110 C "C2'" . DG A 1 6 ? -12.005 13.489 23.862 1.00 21.06 ? 6 DG A "C2'" 1 ATOM 111 C "C1'" . DG A 1 6 ? -11.042 12.377 23.290 1.00 19.65 ? 6 DG A "C1'" 1 ATOM 112 N N9 . DG A 1 6 ? -10.907 11.418 24.453 1.00 18.56 ? 6 DG A N9 1 ATOM 113 C C8 . DG A 1 6 ? -10.702 11.627 25.757 1.00 17.60 ? 6 DG A C8 1 ATOM 114 N N7 . DG A 1 6 ? -10.740 10.509 26.439 1.00 17.38 ? 6 DG A N7 1 ATOM 115 C C5 . DG A 1 6 ? -11.041 9.513 25.516 1.00 17.13 ? 6 DG A C5 1 ATOM 116 C C6 . DG A 1 6 ? -11.167 8.118 25.576 1.00 16.62 ? 6 DG A C6 1 ATOM 117 O O6 . DG A 1 6 ? -11.109 7.480 26.599 1.00 16.29 ? 6 DG A O6 1 ATOM 118 N N1 . DG A 1 6 ? -11.421 7.474 24.403 1.00 16.26 ? 6 DG A N1 1 ATOM 119 C C2 . DG A 1 6 ? -11.486 8.173 23.260 1.00 16.47 ? 6 DG A C2 1 ATOM 120 N N2 . DG A 1 6 ? -11.693 7.603 22.077 1.00 17.12 ? 6 DG A N2 1 ATOM 121 N N3 . DG A 1 6 ? -11.396 9.476 23.130 1.00 17.27 ? 6 DG A N3 1 ATOM 122 C C4 . DG A 1 6 ? -11.144 10.096 24.273 1.00 17.48 ? 6 DG A C4 1 HETATM 123 N N1 . 5CM B 1 1 ? -11.383 2.823 23.090 1.00 18.74 ? 7 5CM B N1 1 HETATM 124 C C2 . 5CM B 1 1 ? -11.380 4.222 23.090 1.00 18.07 ? 7 5CM B C2 1 HETATM 125 N N3 . 5CM B 1 1 ? -11.361 4.830 24.313 1.00 17.58 ? 7 5CM B N3 1 HETATM 126 C C4 . 5CM B 1 1 ? -11.326 4.156 25.476 1.00 17.31 ? 7 5CM B C4 1 HETATM 127 C C5 . 5CM B 1 1 ? -11.419 2.757 25.456 1.00 17.32 ? 7 5CM B C5 1 HETATM 128 C C5A . 5CM B 1 1 ? -11.411 1.987 26.729 1.00 17.74 ? 7 5CM B C5A 1 HETATM 129 C C6 . 5CM B 1 1 ? -11.403 2.146 24.283 1.00 17.86 ? 7 5CM B C6 1 HETATM 130 O O2 . 5CM B 1 1 ? -11.457 4.910 22.027 1.00 17.80 ? 7 5CM B O2 1 HETATM 131 N N4 . 5CM B 1 1 ? -11.301 4.824 26.639 1.00 16.64 ? 7 5CM B N4 1 HETATM 132 C "C1'" . 5CM B 1 1 ? -11.522 2.103 21.797 1.00 19.79 ? 7 5CM B "C1'" 1 HETATM 133 C "C2'" . 5CM B 1 1 ? -10.709 2.513 20.694 1.00 20.46 ? 7 5CM B "C2'" 1 HETATM 134 C "C3'" . 5CM B 1 1 ? -9.695 1.408 20.483 1.00 21.03 ? 7 5CM B "C3'" 1 HETATM 135 C "C4'" . 5CM B 1 1 ? -9.939 0.317 21.466 1.00 21.13 ? 7 5CM B "C4'" 1 HETATM 136 O "O4'" . 5CM B 1 1 ? -11.284 0.624 21.977 1.00 20.85 ? 7 5CM B "O4'" 1 HETATM 137 O "O3'" . 5CM B 1 1 ? -9.940 1.016 19.069 1.00 22.06 ? 7 5CM B "O3'" 1 HETATM 138 C "C5'" . 5CM B 1 1 ? -9.094 -0.011 22.669 1.00 21.34 ? 7 5CM B "C5'" 1 HETATM 139 O "O5'" . 5CM B 1 1 ? -7.738 -0.419 22.528 1.00 21.78 ? 7 5CM B "O5'" 1 ATOM 140 P P . DG B 1 2 ? -8.619 0.478 18.297 1.00 27.23 ? 8 DG B P 1 ATOM 141 O OP1 . DG B 1 2 ? -9.085 0.520 16.834 1.00 26.59 ? 8 DG B OP1 1 ATOM 142 O OP2 . DG B 1 2 ? -8.177 -0.770 18.959 1.00 24.79 ? 8 DG B OP2 1 ATOM 143 O "O5'" . DG B 1 2 ? -7.435 1.604 18.197 1.00 21.38 ? 8 DG B "O5'" 1 ATOM 144 C "C5'" . DG B 1 2 ? -7.988 2.771 17.515 1.00 19.96 ? 8 DG B "C5'" 1 ATOM 145 C "C4'" . DG B 1 2 ? -6.987 3.839 17.826 1.00 19.10 ? 8 DG B "C4'" 1 ATOM 146 O "O4'" . DG B 1 2 ? -6.946 4.165 19.200 1.00 18.01 ? 8 DG B "O4'" 1 ATOM 147 C "C3'" . DG B 1 2 ? -5.595 3.393 17.345 1.00 18.94 ? 8 DG B "C3'" 1 ATOM 148 O "O3'" . DG B 1 2 ? -5.054 4.516 16.553 1.00 20.10 ? 8 DG B "O3'" 1 ATOM 149 C "C2'" . DG B 1 2 ? -4.817 3.299 18.638 1.00 18.24 ? 8 DG B "C2'" 1 ATOM 150 C "C1'" . DG B 1 2 ? -5.516 4.322 19.511 1.00 16.88 ? 8 DG B "C1'" 1 ATOM 151 N N9 . DG B 1 2 ? -5.251 3.978 20.924 1.00 15.05 ? 8 DG B N9 1 ATOM 152 C C8 . DG B 1 2 ? -5.441 2.784 21.556 1.00 14.64 ? 8 DG B C8 1 ATOM 153 N N7 . DG B 1 2 ? -5.254 2.916 22.829 1.00 14.39 ? 8 DG B N7 1 ATOM 154 C C5 . DG B 1 2 ? -4.979 4.245 23.060 1.00 13.70 ? 8 DG B C5 1 ATOM 155 C C6 . DG B 1 2 ? -4.723 4.990 24.243 1.00 13.58 ? 8 DG B C6 1 ATOM 156 O O6 . DG B 1 2 ? -4.606 4.541 25.376 1.00 13.55 ? 8 DG B O6 1 ATOM 157 N N1 . DG B 1 2 ? -4.613 6.323 24.022 1.00 12.71 ? 8 DG B N1 1 ATOM 158 C C2 . DG B 1 2 ? -4.787 6.897 22.839 1.00 12.93 ? 8 DG B C2 1 ATOM 159 N N2 . DG B 1 2 ? -4.646 8.253 22.749 1.00 12.67 ? 8 DG B N2 1 ATOM 160 N N3 . DG B 1 2 ? -4.979 6.250 21.686 1.00 13.52 ? 8 DG B N3 1 ATOM 161 C C4 . DG B 1 2 ? -5.053 4.933 21.887 1.00 13.92 ? 8 DG B C4 1 ATOM 162 P P . DT B 1 3 ? -3.679 4.546 15.711 1.00 23.72 ? 9 DT B P 1 ATOM 163 O OP1 . DT B 1 3 ? -4.112 4.666 14.277 1.00 24.46 ? 9 DT B OP1 1 ATOM 164 O OP2 . DT B 1 3 ? -3.086 3.185 16.092 1.00 24.53 ? 9 DT B OP2 1 ATOM 165 O "O5'" . DT B 1 3 ? -3.037 5.977 16.001 1.00 19.55 ? 9 DT B "O5'" 1 ATOM 166 C "C5'" . DT B 1 3 ? -3.729 7.275 15.971 1.00 18.54 ? 9 DT B "C5'" 1 ATOM 167 C "C4'" . DT B 1 3 ? -3.159 8.027 17.094 1.00 17.95 ? 9 DT B "C4'" 1 ATOM 168 O "O4'" . DT B 1 3 ? -3.305 7.469 18.408 1.00 18.08 ? 9 DT B "O4'" 1 ATOM 169 C "C3'" . DT B 1 3 ? -1.656 8.091 16.914 1.00 18.08 ? 9 DT B "C3'" 1 ATOM 170 O "O3'" . DT B 1 3 ? -1.413 9.410 16.583 1.00 19.06 ? 9 DT B "O3'" 1 ATOM 171 C "C2'" . DT B 1 3 ? -0.993 7.667 18.197 1.00 17.22 ? 9 DT B "C2'" 1 ATOM 172 C "C1'" . DT B 1 3 ? -2.069 7.790 19.210 1.00 16.27 ? 9 DT B "C1'" 1 ATOM 173 N N1 . DT B 1 3 ? -1.869 6.760 20.242 1.00 15.47 ? 9 DT B N1 1 ATOM 174 C C2 . DT B 1 3 ? -1.727 7.230 21.576 1.00 14.37 ? 9 DT B C2 1 ATOM 175 O O2 . DT B 1 3 ? -1.763 8.417 21.786 1.00 14.47 ? 9 DT B O2 1 ATOM 176 N N3 . DT B 1 3 ? -1.548 6.350 22.538 1.00 13.92 ? 9 DT B N3 1 ATOM 177 C C4 . DT B 1 3 ? -1.538 4.988 22.358 1.00 13.94 ? 9 DT B C4 1 ATOM 178 O O4 . DT B 1 3 ? -1.354 4.259 23.401 1.00 13.46 ? 9 DT B O4 1 ATOM 179 C C5 . DT B 1 3 ? -1.669 4.537 21.055 1.00 14.19 ? 9 DT B C5 1 ATOM 180 C C7 . DT B 1 3 ? -1.676 3.040 20.754 1.00 14.75 ? 9 DT B C7 1 ATOM 181 C C6 . DT B 1 3 ? -1.892 5.405 20.062 1.00 14.80 ? 9 DT B C6 1 HETATM 182 P P . AS B 1 4 ? -0.278 10.151 15.971 1.00 26.61 ? 10 AS B P 1 HETATM 183 O OP1 . AS B 1 4 ? -0.979 11.383 15.350 1.00 25.34 ? 10 AS B OP1 1 HETATM 184 S S2P . AS B 1 4 ? 0.608 9.100 15.049 1.00 27.50 ? 10 AS B S2P 1 HETATM 185 O "O5'" . AS B 1 4 ? 0.654 10.643 17.195 1.00 19.96 ? 10 AS B "O5'" 1 HETATM 186 C "C5'" . AS B 1 4 ? -0.168 10.896 18.348 1.00 18.98 ? 10 AS B "C5'" 1 HETATM 187 C "C4'" . AS B 1 4 ? 0.522 11.559 19.470 1.00 18.43 ? 10 AS B "C4'" 1 HETATM 188 O "O4'" . AS B 1 4 ? 0.374 10.686 20.543 1.00 17.71 ? 10 AS B "O4'" 1 HETATM 189 C "C3'" . AS B 1 4 ? 1.955 11.926 19.330 1.00 18.49 ? 10 AS B "C3'" 1 HETATM 190 O "O3'" . AS B 1 4 ? 2.318 13.243 19.791 1.00 19.68 ? 10 AS B "O3'" 1 HETATM 191 C "C2'" . AS B 1 4 ? 2.655 10.800 20.042 1.00 17.95 ? 10 AS B "C2'" 1 HETATM 192 C "C1'" . AS B 1 4 ? 1.681 10.436 21.135 1.00 16.70 ? 10 AS B "C1'" 1 HETATM 193 N N9 . AS B 1 4 ? 1.736 9.068 21.596 1.00 15.05 ? 10 AS B N9 1 HETATM 194 C C8 . AS B 1 4 ? 1.790 7.936 20.934 1.00 14.40 ? 10 AS B C8 1 HETATM 195 N N7 . AS B 1 4 ? 1.815 6.840 21.626 1.00 14.18 ? 10 AS B N7 1 HETATM 196 C C5 . AS B 1 4 ? 1.796 7.344 22.960 1.00 14.26 ? 10 AS B C5 1 HETATM 197 C C6 . AS B 1 4 ? 1.854 6.674 24.213 1.00 13.53 ? 10 AS B C6 1 HETATM 198 N N6 . AS B 1 4 ? 1.873 5.400 24.303 1.00 13.00 ? 10 AS B N6 1 HETATM 199 N N1 . AS B 1 4 ? 1.889 7.505 25.235 1.00 13.41 ? 10 AS B N1 1 HETATM 200 C C2 . AS B 1 4 ? 1.919 8.852 25.205 1.00 13.48 ? 10 AS B C2 1 HETATM 201 N N3 . AS B 1 4 ? 1.802 9.556 24.052 1.00 14.28 ? 10 AS B N3 1 HETATM 202 C C4 . AS B 1 4 ? 1.796 8.734 22.970 1.00 14.52 ? 10 AS B C4 1 HETATM 203 N N1 . 5CM B 1 5 ? 5.607 9.447 22.939 1.00 20.52 ? 11 5CM B N1 1 HETATM 204 C C2 . 5CM B 1 5 ? 5.392 8.624 24.052 1.00 19.95 ? 11 5CM B C2 1 HETATM 205 N N3 . 5CM B 1 5 ? 5.140 7.312 23.832 1.00 19.42 ? 11 5CM B N3 1 HETATM 206 C C4 . 5CM B 1 5 ? 5.073 6.813 22.569 1.00 19.44 ? 11 5CM B C4 1 HETATM 207 C C5 . 5CM B 1 5 ? 5.275 7.701 21.466 1.00 19.64 ? 11 5CM B C5 1 HETATM 208 C C5A . 5CM B 1 5 ? 5.209 7.191 20.032 1.00 19.79 ? 11 5CM B C5A 1 HETATM 209 C C6 . 5CM B 1 5 ? 5.561 8.971 21.666 1.00 19.87 ? 11 5CM B C6 1 HETATM 210 O O2 . 5CM B 1 5 ? 5.434 9.166 25.165 1.00 19.53 ? 11 5CM B O2 1 HETATM 211 N N4 . 5CM B 1 5 ? 4.820 5.509 22.418 1.00 18.64 ? 11 5CM B N4 1 HETATM 212 C "C1'" . 5CM B 1 5 ? 5.938 10.818 23.320 1.00 21.09 ? 11 5CM B "C1'" 1 HETATM 213 C "C2'" . 5CM B 1 5 ? 7.430 10.869 23.120 1.00 22.08 ? 11 5CM B "C2'" 1 HETATM 214 C "C3'" . 5CM B 1 5 ? 7.667 12.249 22.528 1.00 22.45 ? 11 5CM B "C3'" 1 HETATM 215 C "C4'" . 5CM B 1 5 ? 6.322 12.792 22.157 1.00 22.60 ? 11 5CM B "C4'" 1 HETATM 216 O "O4'" . 5CM B 1 5 ? 5.279 11.910 22.739 1.00 22.09 ? 11 5CM B "O4'" 1 HETATM 217 O "O3'" . 5CM B 1 5 ? 8.528 12.994 23.401 1.00 23.24 ? 11 5CM B "O3'" 1 HETATM 218 C "C5'" . 5CM B 1 5 ? 6.121 12.903 20.613 1.00 22.69 ? 11 5CM B "C5'" 1 HETATM 219 O "O5'" . 5CM B 1 5 ? 4.817 13.343 20.383 1.00 23.09 ? 11 5CM B "O5'" 1 HETATM 220 P P . 5CM B 1 5 ? 3.768 13.881 19.350 1.00 27.78 ? 11 5CM B P 1 HETATM 221 O OP1 . 5CM B 1 5 ? 3.524 15.451 19.340 1.00 26.22 ? 11 5CM B OP1 1 HETATM 222 O OP2 . 5CM B 1 5 ? 4.004 13.343 17.987 1.00 28.02 ? 11 5CM B OP2 1 ATOM 223 P P . DG B 1 6 ? 9.627 14.081 22.960 1.00 26.74 ? 12 DG B P 1 ATOM 224 O OP1 . DG B 1 6 ? 9.222 15.166 22.027 1.00 26.31 ? 12 DG B OP1 1 ATOM 225 O OP2 . DG B 1 6 ? 10.733 13.487 22.047 1.00 23.58 ? 12 DG B OP2 1 ATOM 226 O "O5'" . DG B 1 6 ? 10.348 14.291 24.494 1.00 23.32 ? 12 DG B "O5'" 1 ATOM 227 C "C5'" . DG B 1 6 ? 9.465 14.425 25.647 1.00 21.60 ? 12 DG B "C5'" 1 ATOM 228 C "C4'" . DG B 1 6 ? 10.007 13.395 26.609 1.00 21.19 ? 12 DG B "C4'" 1 ATOM 229 O "O4'" . DG B 1 6 ? 10.127 12.099 26.048 1.00 20.95 ? 12 DG B "O4'" 1 ATOM 230 C "C3'" . DG B 1 6 ? 11.325 13.723 27.211 1.00 21.03 ? 12 DG B "C3'" 1 ATOM 231 O "O3'" . DG B 1 6 ? 11.316 13.862 28.674 1.00 21.34 ? 12 DG B "O3'" 1 ATOM 232 C "C2'" . DG B 1 6 ? 12.274 12.628 26.609 1.00 20.22 ? 12 DG B "C2'" 1 ATOM 233 C "C1'" . DG B 1 6 ? 11.417 11.436 26.699 1.00 19.45 ? 12 DG B "C1'" 1 ATOM 234 N N9 . DG B 1 6 ? 11.586 10.315 25.797 1.00 18.29 ? 12 DG B N9 1 ATOM 235 C C8 . DG B 1 6 ? 11.342 10.445 24.443 1.00 17.85 ? 12 DG B C8 1 ATOM 236 N N7 . DG B 1 6 ? 11.311 9.315 23.832 1.00 17.84 ? 12 DG B N7 1 ATOM 237 C C5 . DG B 1 6 ? 11.529 8.348 24.814 1.00 17.17 ? 12 DG B C5 1 ATOM 238 C C6 . DG B 1 6 ? 11.693 6.956 24.704 1.00 16.89 ? 12 DG B C6 1 ATOM 239 O O6 . DG B 1 6 ? 11.668 6.261 23.711 1.00 16.15 ? 12 DG B O6 1 ATOM 240 N N1 . DG B 1 6 ? 11.895 6.371 25.907 1.00 16.46 ? 12 DG B N1 1 ATOM 241 C C2 . DG B 1 6 ? 11.936 7.079 27.070 1.00 16.67 ? 12 DG B C2 1 ATOM 242 N N2 . DG B 1 6 ? 12.124 6.343 28.183 1.00 16.96 ? 12 DG B N2 1 ATOM 243 N N3 . DG B 1 6 ? 11.858 8.380 27.241 1.00 17.57 ? 12 DG B N3 1 ATOM 244 C C4 . DG B 1 6 ? 11.690 8.977 26.017 1.00 17.62 ? 12 DG B C4 1 HETATM 245 C C1 . NGM C 2 . ? 8.227 3.149 24.293 1.00 18.07 ? 14 NGM A C1 1 HETATM 246 C C2 . NGM C 2 . ? 8.057 3.279 22.950 1.00 18.22 ? 14 NGM A C2 1 HETATM 247 C C3 . NGM C 2 . ? 8.061 4.557 22.288 1.00 17.50 ? 14 NGM A C3 1 HETATM 248 C C4 . NGM C 2 . ? 8.180 5.660 23.090 1.00 17.16 ? 14 NGM A C4 1 HETATM 249 C C5 . NGM C 2 . ? 8.390 6.845 25.215 1.00 17.03 ? 14 NGM A C5 1 HETATM 250 C C6 . NGM C 2 . ? 8.599 7.963 27.381 1.00 18.46 ? 14 NGM A C6 1 HETATM 251 C C7 . NGM C 2 . ? 8.789 9.335 29.476 1.00 20.75 ? 14 NGM A C7 1 HETATM 252 C C8 . NGM C 2 . ? 9.226 9.116 30.980 1.00 21.36 ? 14 NGM A C8 1 HETATM 253 C C9 . NGM C 2 . ? 8.595 7.847 31.672 1.00 21.22 ? 14 NGM A C9 1 HETATM 254 C C10 . NGM C 2 . ? 8.985 6.576 30.970 1.00 21.14 ? 14 NGM A C10 1 HETATM 255 C C11 . NGM C 2 . ? 8.710 5.448 28.745 1.00 19.06 ? 14 NGM A C11 1 HETATM 256 C C12 . NGM C 2 . ? 8.531 4.268 26.589 1.00 17.90 ? 14 NGM A C12 1 HETATM 257 C C13 . NGM C 2 . ? 7.179 8.055 31.823 1.00 21.69 ? 14 NGM A C13 1 HETATM 258 C C14 . NGM C 2 . ? 10.445 6.216 31.241 1.00 21.83 ? 14 NGM A C14 1 HETATM 259 C C15 . NGM C 2 . ? 11.987 4.411 31.311 1.00 21.82 ? 14 NGM A C15 1 HETATM 260 C C16 . NGM C 2 . ? 8.361 4.311 25.085 1.00 17.54 ? 14 NGM A C16 1 HETATM 261 C C17 . NGM C 2 . ? 8.289 5.598 24.463 1.00 17.06 ? 14 NGM A C17 1 HETATM 262 C C18 . NGM C 2 . ? 8.506 6.817 26.629 1.00 17.84 ? 14 NGM A C18 1 HETATM 263 C C19 . NGM C 2 . ? 8.727 7.966 28.815 1.00 19.75 ? 14 NGM A C19 1 HETATM 264 C C20 . NGM C 2 . ? 8.769 6.685 29.416 1.00 20.07 ? 14 NGM A C20 1 HETATM 265 C C21 . NGM C 2 . ? 8.578 5.535 27.301 1.00 18.19 ? 14 NGM A C21 1 HETATM 266 C C22 . NGM C 2 . ? 8.407 2.085 20.704 1.00 18.75 ? 14 NGM A C22 1 HETATM 267 C C23 . NGM C 2 . ? 3.699 -0.242 22.960 1.00 20.18 ? 14 NGM A C23 1 HETATM 268 C C24 . NGM C 2 . ? 3.173 1.381 24.534 1.00 20.42 ? 14 NGM A C24 1 HETATM 269 C C25 . NGM C 2 . ? 6.984 13.792 31.552 1.00 24.80 ? 14 NGM A C25 1 HETATM 270 C C26 . NGM C 2 . ? 3.778 12.664 32.404 1.00 24.99 ? 14 NGM A C26 1 HETATM 271 C C27 . NGM C 2 . ? 2.924 11.481 27.572 1.00 24.07 ? 14 NGM A C27 1 HETATM 272 C C28 . NGM C 2 . ? 4.653 10.105 30.178 1.00 24.35 ? 14 NGM A C28 1 HETATM 273 C C29 . NGM C 2 . ? 6.643 12.878 26.549 1.00 24.02 ? 14 NGM A C29 1 HETATM 274 C C30 . NGM C 2 . ? 7.942 0.709 24.253 1.00 19.18 ? 14 NGM A C30 1 HETATM 275 C C31 . NGM C 2 . ? 6.455 0.417 24.253 1.00 19.46 ? 14 NGM A C31 1 HETATM 276 C C32 . NGM C 2 . ? 5.608 1.356 23.381 1.00 19.70 ? 14 NGM A C32 1 HETATM 277 C C33 . NGM C 2 . ? 6.276 1.656 22.067 1.00 19.25 ? 14 NGM A C33 1 HETATM 278 C C34 . NGM C 2 . ? 7.806 1.969 22.137 1.00 18.89 ? 14 NGM A C34 1 HETATM 279 C "C1'" . NGM C 2 . ? 7.184 11.099 29.005 1.00 23.85 ? 14 NGM A "C1'" 1 HETATM 280 C "C2'" . NGM C 2 . ? 5.786 11.324 28.323 1.00 24.26 ? 14 NGM A "C2'" 1 HETATM 281 C "C3'" . NGM C 2 . ? 4.667 11.525 29.416 1.00 24.57 ? 14 NGM A "C3'" 1 HETATM 282 C "C4'" . NGM C 2 . ? 5.066 12.716 30.319 1.00 24.84 ? 14 NGM A "C4'" 1 HETATM 283 C "C5'" . NGM C 2 . ? 6.417 12.454 30.910 1.00 24.85 ? 14 NGM A "C5'" 1 HETATM 284 N N1 . NGM C 2 . ? 4.119 1.082 23.230 1.00 20.23 ? 14 NGM A N1 1 HETATM 285 O O1 . NGM C 2 . ? 8.209 1.973 24.945 1.00 18.71 ? 14 NGM A O1 1 HETATM 286 O O2 . NGM C 2 . ? 8.472 0.861 22.809 1.00 19.00 ? 14 NGM A O2 1 HETATM 287 O O4 . NGM C 2 . ? 8.057 6.783 22.468 1.00 17.36 ? 14 NGM A O4 1 HETATM 288 O O5 . NGM C 2 . ? 8.371 7.982 24.674 1.00 16.83 ? 14 NGM A O5 1 HETATM 289 O O6 . NGM C 2 . ? 8.559 9.141 26.749 1.00 17.71 ? 14 NGM A O6 1 HETATM 290 O O7 . NGM C 2 . ? 7.415 9.809 29.456 1.00 22.47 ? 14 NGM A O7 1 HETATM 291 O O9 . NGM C 2 . ? 9.233 7.717 33.006 1.00 21.98 ? 14 NGM A O9 1 HETATM 292 O O10 . NGM C 2 . ? 10.715 4.951 31.662 1.00 22.42 ? 14 NGM A O10 1 HETATM 293 O O14 . NGM C 2 . ? 11.442 6.822 31.051 1.00 22.04 ? 14 NGM A O14 1 HETATM 294 O O12 . NGM C 2 . ? 8.524 3.226 27.281 1.00 18.14 ? 14 NGM A O12 1 HETATM 295 O O15 . NGM C 2 . ? 5.992 0.157 25.536 1.00 19.74 ? 14 NGM A O15 1 HETATM 296 O O16 . NGM C 2 . ? 5.655 2.773 21.536 1.00 19.46 ? 14 NGM A O16 1 HETATM 297 O "O1'" . NGM C 2 . ? 7.450 12.229 29.867 1.00 24.45 ? 14 NGM A "O1'" 1 HETATM 298 O "O2'" . NGM C 2 . ? 5.732 12.566 27.612 1.00 24.39 ? 14 NGM A "O2'" 1 HETATM 299 O "O3'" . NGM C 2 . ? 3.518 11.971 28.795 1.00 24.49 ? 14 NGM A "O3'" 1 HETATM 300 O "O4'" . NGM C 2 . ? 4.128 13.302 31.171 1.00 25.47 ? 14 NGM A "O4'" 1 HETATM 301 C C1 . NGM D 2 . ? -7.811 3.441 25.857 1.00 13.05 ? 13 NGM B C1 1 HETATM 302 C C2 . NGM D 2 . ? -7.705 3.488 27.251 1.00 13.19 ? 13 NGM B C2 1 HETATM 303 C C3 . NGM D 2 . ? -7.689 4.714 27.993 1.00 12.24 ? 13 NGM B C3 1 HETATM 304 C C4 . NGM D 2 . ? -7.768 5.881 27.291 1.00 11.95 ? 13 NGM B C4 1 HETATM 305 C C5 . NGM D 2 . ? -8.001 7.191 25.215 1.00 11.57 ? 13 NGM B C5 1 HETATM 306 C C6 . NGM D 2 . ? -8.123 8.396 23.100 1.00 12.67 ? 13 NGM B C6 1 HETATM 307 C C7 . NGM D 2 . ? -8.317 9.848 21.045 1.00 14.55 ? 13 NGM B C7 1 HETATM 308 C C8 . NGM D 2 . ? -8.620 9.754 19.501 1.00 15.41 ? 13 NGM B C8 1 HETATM 309 C C9 . NGM D 2 . ? -7.863 8.551 18.789 1.00 15.07 ? 13 NGM B C9 1 HETATM 310 C C10 . NGM D 2 . ? -8.396 7.278 19.400 1.00 14.92 ? 13 NGM B C10 1 HETATM 311 C C11 . NGM D 2 . ? -8.247 5.995 21.586 1.00 13.34 ? 13 NGM B C11 1 HETATM 312 C C12 . NGM D 2 . ? -8.084 4.714 23.651 1.00 12.77 ? 13 NGM B C12 1 HETATM 313 C C13 . NGM D 2 . ? -6.460 8.779 18.719 1.00 15.34 ? 13 NGM B C13 1 HETATM 314 C C14 . NGM D 2 . ? -9.874 7.114 19.069 1.00 15.37 ? 13 NGM B C14 1 HETATM 315 C C15 . NGM D 2 . ? -11.320 5.293 19.250 1.00 16.07 ? 13 NGM B C15 1 HETATM 316 C C16 . NGM D 2 . ? -7.894 4.655 25.175 1.00 12.36 ? 13 NGM B C16 1 HETATM 317 C C17 . NGM D 2 . ? -7.873 5.890 25.907 1.00 12.02 ? 13 NGM B C17 1 HETATM 318 C C18 . NGM D 2 . ? -8.085 7.237 23.782 1.00 12.28 ? 13 NGM B C18 1 HETATM 319 C C19 . NGM D 2 . ? -8.268 8.474 21.626 1.00 13.80 ? 13 NGM B C19 1 HETATM 320 C C20 . NGM D 2 . ? -8.328 7.239 20.964 1.00 13.98 ? 13 NGM B C20 1 HETATM 321 C C21 . NGM D 2 . ? -8.178 6.022 23.030 1.00 12.53 ? 13 NGM B C21 1 HETATM 322 C C22 . NGM D 2 . ? -8.007 2.053 29.426 1.00 13.66 ? 13 NGM B C22 1 HETATM 323 C C23 . NGM D 2 . ? -2.815 0.957 26.338 1.00 15.36 ? 13 NGM B C23 1 HETATM 324 C C24 . NGM D 2 . ? -4.148 -0.636 27.551 1.00 15.50 ? 13 NGM B C24 1 HETATM 325 C C25 . NGM D 2 . ? -6.821 13.204 18.318 1.00 17.68 ? 13 NGM B C25 1 HETATM 326 C C26 . NGM D 2 . ? -3.790 14.011 18.247 1.00 18.51 ? 13 NGM B C26 1 HETATM 327 C C27 . NGM D 2 . ? -1.809 11.928 21.736 1.00 19.15 ? 13 NGM B C27 1 HETATM 328 C C28 . NGM D 2 . ? -3.793 10.205 20.253 1.00 18.55 ? 13 NGM B C28 1 HETATM 329 C C29 . NGM D 2 . ? -4.905 12.926 23.972 1.00 18.71 ? 13 NGM B C29 1 HETATM 330 C C30 . NGM D 2 . ? -7.547 1.018 25.747 1.00 14.11 ? 13 NGM B C30 1 HETATM 331 C C31 . NGM D 2 . ? -6.071 0.727 25.636 1.00 14.42 ? 13 NGM B C31 1 HETATM 332 C C32 . NGM D 2 . ? -5.249 1.590 26.639 1.00 14.56 ? 13 NGM B C32 1 HETATM 333 C C33 . NGM D 2 . ? -5.871 1.930 28.003 1.00 14.31 ? 13 NGM B C33 1 HETATM 334 C C34 . NGM D 2 . ? -7.401 2.151 27.983 1.00 13.55 ? 13 NGM B C34 1 HETATM 335 C "C1'" . NGM D 2 . ? -6.688 11.557 21.546 1.00 17.39 ? 13 NGM B "C1'" 1 HETATM 336 C "C2'" . NGM D 2 . ? -5.138 11.671 21.947 1.00 18.14 ? 13 NGM B "C2'" 1 HETATM 337 C "C3'" . NGM D 2 . ? -4.162 11.712 20.784 1.00 18.31 ? 13 NGM B "C3'" 1 HETATM 338 C "C4'" . NGM D 2 . ? -4.742 12.607 19.661 1.00 18.46 ? 13 NGM B "C4'" 1 HETATM 339 C "C5'" . NGM D 2 . ? -6.116 12.279 19.330 1.00 18.18 ? 13 NGM B "C5'" 1 HETATM 340 N N1 . NGM D 2 . ? -3.962 0.838 27.060 1.00 14.80 ? 13 NGM B N1 1 HETATM 341 O O1 . NGM D 2 . ? -7.789 2.349 25.115 1.00 13.72 ? 13 NGM B O1 1 HETATM 342 O O2 . NGM D 2 . ? -7.893 1.048 27.201 1.00 14.17 ? 13 NGM B O2 1 HETATM 343 O O4 . NGM D 2 . ? -7.760 6.970 28.083 1.00 11.58 ? 13 NGM B O4 1 HETATM 344 O O5 . NGM D 2 . ? -7.956 8.221 25.877 1.00 11.35 ? 13 NGM B O5 1 HETATM 345 O O6 . NGM D 2 . ? -8.051 9.556 23.782 1.00 12.08 ? 13 NGM B O6 1 HETATM 346 O O7 . NGM D 2 . ? -6.968 10.274 21.014 1.00 16.32 ? 13 NGM B O7 1 HETATM 347 O O9 . NGM D 2 . ? -8.452 8.624 17.425 1.00 15.88 ? 13 NGM B O9 1 HETATM 348 O O10 . NGM D 2 . ? -10.011 5.783 18.829 1.00 15.69 ? 13 NGM B O10 1 HETATM 349 O O14 . NGM D 2 . ? -10.815 7.767 19.430 1.00 15.23 ? 13 NGM B O14 1 HETATM 350 O O12 . NGM D 2 . ? -8.084 3.716 22.879 1.00 13.23 ? 13 NGM B O12 1 HETATM 351 O O15 . NGM D 2 . ? -5.703 0.818 24.263 1.00 14.55 ? 13 NGM B O15 1 HETATM 352 O O16 . NGM D 2 . ? -5.046 2.830 28.714 1.00 13.69 ? 13 NGM B O16 1 HETATM 353 O "O1'" . NGM D 2 . ? -6.893 12.582 20.603 1.00 18.03 ? 13 NGM B "O1'" 1 HETATM 354 O "O2'" . NGM D 2 . ? -5.071 12.999 22.518 1.00 18.12 ? 13 NGM B "O2'" 1 HETATM 355 O "O3'" . NGM D 2 . ? -3.065 12.359 21.155 1.00 18.15 ? 13 NGM B "O3'" 1 HETATM 356 O "O4'" . NGM D 2 . ? -3.943 12.561 18.458 1.00 18.24 ? 13 NGM B "O4'" 1 HETATM 357 O O . HOH E 3 . ? -1.702 4.316 30.539 1.00 20.76 ? 15 HOH A O 1 HETATM 358 O O . HOH E 3 . ? 11.821 22.534 29.958 1.00 23.82 ? 19 HOH A O 1 HETATM 359 O O . HOH E 3 . ? 24.902 0.355 22.438 1.00 39.24 ? 23 HOH A O 1 HETATM 360 O O . HOH E 3 . ? 11.705 4.388 20.894 1.00 18.30 ? 25 HOH A O 1 HETATM 361 O O . HOH E 3 . ? 11.751 8.720 19.511 1.00 25.70 ? 28 HOH A O 1 HETATM 362 O O . HOH E 3 . ? -2.071 5.427 32.770 1.00 39.24 ? 30 HOH A O 1 HETATM 363 O O . HOH E 3 . ? -5.151 5.749 33.782 1.00 19.03 ? 31 HOH A O 1 HETATM 364 O O . HOH E 3 . ? 20.472 9.233 33.873 1.00 43.15 ? 32 HOH A O 1 HETATM 365 O O . HOH E 3 . ? -1.451 2.887 28.263 1.00 28.40 ? 35 HOH A O 1 HETATM 366 O O . HOH E 3 . ? 4.757 17.718 31.131 1.00 29.87 ? 36 HOH A O 1 HETATM 367 O O . HOH E 3 . ? -9.782 18.615 27.732 1.00 36.17 ? 38 HOH A O 1 HETATM 368 O O . HOH E 3 . ? 5.187 15.031 27.702 1.00 32.83 ? 40 HOH A O 1 HETATM 369 O O . HOH E 3 . ? 4.542 18.759 28.083 1.00 39.55 ? 41 HOH A O 1 HETATM 370 O O . HOH E 3 . ? 0.229 17.991 26.930 1.00 22.77 ? 42 HOH A O 1 HETATM 371 O O . HOH E 3 . ? -3.648 16.016 25.606 1.00 38.61 ? 43 HOH A O 1 HETATM 372 O O . HOH E 3 . ? -5.650 19.566 24.534 1.00 29.33 ? 44 HOH A O 1 HETATM 373 O O . HOH E 3 . ? -4.840 18.176 18.618 1.00 21.43 ? 47 HOH A O 1 HETATM 374 O O . HOH E 3 . ? 0.280 22.081 17.355 1.00 33.38 ? 48 HOH A O 1 HETATM 375 O O . HOH E 3 . ? 0.935 15.574 32.459 1.00 34.62 ? 51 HOH A O 1 HETATM 376 O O . HOH E 3 . ? 7.593 21.272 28.634 1.00 22.28 ? 52 HOH A O 1 HETATM 377 O O . HOH E 3 . ? -8.238 17.166 30.008 1.00 46.32 ? 53 HOH A O 1 HETATM 378 O O . HOH E 3 . ? -0.989 19.135 20.613 1.00 26.87 ? 55 HOH A O 1 HETATM 379 O O . HOH E 3 . ? 13.533 0.832 19.912 1.00 19.51 ? 57 HOH A O 1 HETATM 380 O O . HOH E 3 . ? 2.144 2.661 22.368 1.00 24.82 ? 58 HOH A O 1 HETATM 381 O O . HOH E 3 . ? -6.383 16.642 33.702 1.00 48.98 ? 62 HOH A O 1 HETATM 382 O O . HOH E 3 . ? -3.192 9.349 32.910 1.00 22.73 ? 63 HOH A O 1 HETATM 383 O O . HOH E 3 . ? -10.804 22.523 30.660 1.00 48.65 ? 64 HOH A O 1 HETATM 384 O O . HOH E 3 . ? 1.798 21.407 31.071 1.00 48.68 ? 66 HOH A O 1 HETATM 385 O O . HOH E 3 . ? 14.665 1.217 31.542 1.00 40.00 ? 67 HOH A O 1 HETATM 386 O O . HOH E 3 . ? -5.496 19.130 29.627 1.00 42.36 ? 68 HOH A O 1 HETATM 387 O O . HOH E 3 . ? 2.756 21.671 27.401 1.00 36.14 ? 69 HOH A O 1 HETATM 388 O O . HOH E 3 . ? -6.942 20.605 27.582 1.00 32.75 ? 70 HOH A O 1 HETATM 389 O O . HOH E 3 . ? -0.193 14.216 27.000 1.00 22.26 ? 71 HOH A O 1 HETATM 390 O O . HOH E 3 . ? 2.653 16.353 25.657 1.00 42.16 ? 72 HOH A O 1 HETATM 391 O O . HOH E 3 . ? -3.102 19.709 24.814 1.00 32.42 ? 73 HOH A O 1 HETATM 392 O O . HOH E 3 . ? -4.853 19.329 21.686 1.00 46.14 ? 76 HOH A O 1 HETATM 393 O O . HOH E 3 . ? -8.135 17.390 19.581 1.00 30.74 ? 78 HOH A O 1 HETATM 394 O O . HOH E 3 . ? 9.110 7.991 19.711 1.00 26.58 ? 79 HOH A O 1 HETATM 395 O O . HOH E 3 . ? -7.954 21.874 29.928 1.00 34.23 ? 80 HOH A O 1 HETATM 396 O O . HOH E 3 . ? -2.005 16.674 29.657 1.00 19.20 ? 81 HOH A O 1 HETATM 397 O O . HOH E 3 . ? 1.305 16.446 29.105 1.00 45.03 ? 82 HOH A O 1 HETATM 398 O O . HOH E 3 . ? -3.799 19.358 27.441 1.00 84.60 ? 83 HOH A O 1 HETATM 399 O O . HOH E 3 . ? 1.071 0.647 18.528 1.00 35.39 ? 86 HOH A O 1 HETATM 400 O O . HOH E 3 . ? 3.583 1.126 19.390 1.00 36.61 ? 87 HOH A O 1 HETATM 401 O O . HOH E 3 . ? -9.482 17.804 32.740 1.00 31.45 ? 90 HOH A O 1 HETATM 402 O O . HOH F 3 . ? 16.482 12.589 32.073 1.00 19.60 ? 16 HOH B O 1 HETATM 403 O O . HOH F 3 . ? 13.504 14.653 31.883 1.00 37.86 ? 17 HOH B O 1 HETATM 404 O O . HOH F 3 . ? 13.333 11.012 29.837 1.00 47.95 ? 18 HOH B O 1 HETATM 405 O O . HOH F 3 . ? 15.395 8.191 30.008 1.00 21.45 ? 20 HOH B O 1 HETATM 406 O O . HOH F 3 . ? 5.650 20.240 24.133 1.00 32.10 ? 21 HOH B O 1 HETATM 407 O O . HOH F 3 . ? 8.246 19.504 23.220 1.00 48.27 ? 22 HOH B O 1 HETATM 408 O O . HOH F 3 . ? 2.176 3.814 20.042 1.00 22.59 ? 24 HOH B O 1 HETATM 409 O O . HOH F 3 . ? 11.778 15.719 21.045 1.00 39.27 ? 26 HOH B O 1 HETATM 410 O O . HOH F 3 . ? 0.009 16.157 19.781 1.00 34.21 ? 27 HOH B O 1 HETATM 411 O O . HOH F 3 . ? 15.166 11.632 17.285 1.00 30.24 ? 29 HOH B O 1 HETATM 412 O O . HOH F 3 . ? 18.602 9.262 31.401 1.00 38.64 ? 33 HOH B O 1 HETATM 413 O O . HOH F 3 . ? 13.996 20.445 31.241 1.00 25.02 ? 34 HOH B O 1 HETATM 414 O O . HOH F 3 . ? 10.364 17.590 29.366 1.00 34.50 ? 37 HOH B O 1 HETATM 415 O O . HOH F 3 . ? 13.679 16.711 28.394 1.00 24.09 ? 39 HOH B O 1 HETATM 416 O O . HOH F 3 . ? 13.013 19.308 22.318 1.00 34.88 ? 45 HOH B O 1 HETATM 417 O O . HOH F 3 . ? 11.486 18.303 19.621 1.00 34.65 ? 46 HOH B O 1 HETATM 418 O O . HOH F 3 . ? 14.452 15.594 19.230 1.00 27.22 ? 49 HOH B O 1 HETATM 419 O O . HOH F 3 . ? 6.255 18.672 18.468 1.00 50.64 ? 50 HOH B O 1 HETATM 420 O O . HOH F 3 . ? 9.724 21.810 22.258 1.00 30.92 ? 54 HOH B O 1 HETATM 421 O O . HOH F 3 . ? 17.839 14.794 20.503 1.00 25.08 ? 56 HOH B O 1 HETATM 422 O O . HOH F 3 . ? 4.778 4.703 19.922 1.00 37.75 ? 59 HOH B O 1 HETATM 423 O O . HOH F 3 . ? 9.293 11.766 19.110 1.00 22.16 ? 60 HOH B O 1 HETATM 424 O O . HOH F 3 . ? 11.267 22.108 17.826 1.00 29.95 ? 61 HOH B O 1 HETATM 425 O O . HOH F 3 . ? 2.436 19.431 17.596 1.00 45.44 ? 65 HOH B O 1 HETATM 426 O O . HOH F 3 . ? 11.084 20.443 25.907 1.00 29.21 ? 74 HOH B O 1 HETATM 427 O O . HOH F 3 . ? -3.919 15.391 20.924 1.00 49.92 ? 75 HOH B O 1 HETATM 428 O O . HOH F 3 . ? 14.423 11.256 20.984 1.00 41.84 ? 77 HOH B O 1 HETATM 429 O O . HOH F 3 . ? 7.930 16.770 23.822 1.00 51.21 ? 84 HOH B O 1 HETATM 430 O O . HOH F 3 . ? 1.801 20.131 21.426 1.00 66.55 ? 85 HOH B O 1 HETATM 431 O O . HOH F 3 . ? 14.390 19.470 18.588 1.00 36.87 ? 88 HOH B O 1 HETATM 432 O O . HOH F 3 . ? 0.204 4.031 17.094 1.00 23.44 ? 89 HOH B O 1 HETATM 433 O O . HOH F 3 . ? 8.919 23.423 16.423 1.00 50.18 ? 91 HOH B O 1 #