0.040355 0.000000 0.000000 0.000000 0.024480 0.000000 0.000000 0.000000 0.015228 0.00000 0.00000 0.00000 Narayana, N. Ginell, S.L. Russu, I.M. Berman, H.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 24.780 40.850 65.670 C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 N C N 12 R C Y 13 N N Y 14 N C Y 15 N N Y 16 N C Y 17 N C N 18 N N Y 19 N N Y 20 N C Y 21 N N Y 22 N C N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N O N 38 N P N 39 N O N 40 N O N 41 N O N 42 N C N 43 R C N 44 N O N 45 S C N 46 N O N 47 N C N 48 R C N 49 N N N 50 N C N 51 N O N 52 N N N 53 N C N 54 N N N 55 N C N 56 N C N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N O N 72 N P N 73 N O N 74 N O N 75 N O N 76 N C N 77 R C N 78 N O N 79 S C N 80 N O N 81 N C N 82 R C Y 83 N N Y 84 N C Y 85 N N Y 86 N C N 87 N C N 88 N O N 89 N N N 90 N C N 91 N N N 92 N N Y 93 N C N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N O N 109 N P N 110 N O N 111 N O N 112 N O N 113 N C N 114 R C N 115 N O N 116 S C N 117 N O N 118 N C N 119 R C N 120 N N N 121 N C N 122 N O N 123 N N N 124 N C N 125 N O N 126 N C N 127 N C N 128 N C N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N O N 145 N H N 146 N H N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N sing Y 30 N doub N 31 N sing Y 32 N doub N 33 N sing N 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N sing N 102 N sing Y 103 N doub N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N doub N 139 N sing N 140 N sing N 141 N sing N 142 N doub N 143 N sing N 144 N sing N 145 N doub N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing US Biochemistry BICHAW 0033 0006-2960 30 4449 4455 10.1021/bi00232a011 2021634 Crystal and molecular structure of a DNA fragment: d(CGTGAATTCACG). 1991 10.2210/pdb1d28/pdb pdb_00001d28 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 183.00 1 AREA DETECTOR SIEMENS-NICOLET x-ray 1 1.0 ROTATING ANODE RIGAKU RU200 3662.404 DNA (5'-D(*CP*GP*TP*GP*AP*AP*TP*TP*CP*AP*CP*G)-3') 2 syn polymer 18.015 water 85 nat water no no (DC)(DG)(DT)(DG)(DA)(DA)(DT)(DT)(DC)(DA)(DC)(DG) CGTGAATTCACG A,B polydeoxyribonucleotide n n n n n n n n n n n n 2.27 45.79 VAPOR DIFFUSION, HANGING DROP VAPOR DIFFUSION, HANGING DROP, temperature 277.00K 277.00 WATER 1 MPD 1 NA CACODYLATE 1 MGCL2 1 SPERMINE 1 WATER 2 MPD 2 1.311 1 19 A 1 B 24 -3.039 A_DC1:DG24_B 1 -10.752 0.047 0.083 -0.172 -3.657 1 19 A 2 B 23 -16.543 A_DG2:DC23_B 2 -10.137 -0.516 -0.112 -0.230 2.894 1 20 A 3 B 22 -11.575 A_DT3:DA22_B 3 -5.588 -0.571 0.231 -0.239 5.787 1 19 A 4 B 21 2.565 A_DG4:DC21_B 4 -8.713 -0.201 -0.028 -0.282 0.284 1 20 A 5 B 20 -4.823 A_DA5:DT20_B 5 -12.546 -0.098 -0.083 0.148 3.309 1 20 A 6 B 19 6.723 A_DA6:DT19_B 6 -12.066 0.259 0.072 0.064 -4.154 1 20 A 7 B 18 -0.978 A_DT7:DA18_B 7 -18.222 0.161 0.110 0.064 -1.056 1 20 A 8 B 17 -0.060 A_DT8:DA17_B 8 -20.215 0.192 -0.135 -0.583 -14.098 1 19 A 9 B 16 -1.014 A_DC9:DG16_B 9 -11.360 0.481 0.276 -0.343 -6.189 1 20 A 10 B 15 0.798 A_DA10:DT15_B 10 -3.933 -0.374 -0.372 -0.517 3.135 1 19 A 11 B 14 -8.774 A_DC11:DG14_B 11 -19.342 -0.168 0.166 -0.193 -0.530 1 19 A 12 B 13 1.570 A_DG12:DC13_B 12 -5.437 0.168 0.350 0.027 3.422 40.324 A A 1 2 9.411 B B 24 23 3.465 6.462 -0.785 0.060 AA_DC1DG2:DC23DG24_BB 1 0.572 -0.833 39.820 -0.685 1.207 3.327 28.927 A A 2 3 1.449 B B 23 22 3.360 0.721 -0.145 -0.743 AA_DG2DT3:DA22DC23_BB 2 -4.271 8.582 28.608 -1.652 -0.682 3.475 32.957 A A 3 4 1.741 B B 22 21 3.403 0.985 0.880 -0.154 AA_DT3DG4:DC21DA22_BB 3 3.795 -6.705 32.729 -0.448 -0.870 3.261 38.735 A A 4 5 8.536 B B 21 20 3.312 5.643 0.097 -0.123 AA_DG4DA5:DT20DC21_BB 4 -0.595 0.899 38.333 -0.883 -0.220 3.072 38.474 A A 5 6 1.119 B B 20 19 3.086 0.737 0.260 0.089 AA_DA5DA6:DT19DT20_BB 5 -1.887 2.864 38.423 0.049 -0.615 3.461 33.052 A A 6 7 -0.743 B B 19 18 3.449 -0.423 -0.388 -0.290 AA_DA6DT7:DA18DT19_BB 6 -0.903 1.588 33.037 -0.434 0.521 3.139 35.158 A A 7 8 -7.391 B B 18 17 3.170 -4.451 -0.220 -0.084 AA_DT7DT8:DA17DA18_BB 7 2.009 -3.337 34.827 0.504 0.654 3.537 43.454 A A 8 9 -1.648 B B 17 16 3.523 -1.220 -0.107 -0.510 AA_DT8DC9:DG16DA17_BB 8 -2.029 2.741 43.392 -0.561 -0.067 3.371 28.804 A A 9 10 8.364 B B 16 15 3.177 4.136 0.573 1.274 AA_DC9DA10:DT15DG16_BB 9 3.647 -7.374 28.283 1.627 -0.328 3.135 42.987 A A 10 11 -12.240 B B 15 14 3.176 -8.885 -1.106 0.473 AA_DA10DC11:DG14DT15_BB 10 -5.754 7.927 41.723 1.509 0.951 3.543 36.041 A A 11 12 -0.119 B B 14 13 3.511 -0.073 1.073 1.007 AA_DC11DG12:DC13DG14_BB 11 1.246 -2.014 36.020 1.639 -1.544 chem_comp_atom chem_comp_bond database_2 repository Initial release Version format compliance Version format compliance Data collection Database references 1 0 1992-04-07 1 1 2008-05-22 1 2 2011-07-13 1 3 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession BNL Y NDB 1990-12-18 REL REL HOH water HOH 26 2 HOH HOH 26 A HOH 29 2 HOH HOH 29 A HOH 30 2 HOH HOH 30 A HOH 32 2 HOH HOH 32 A HOH 34 2 HOH HOH 34 A HOH 37 2 HOH HOH 37 A HOH 38 2 HOH HOH 38 A HOH 40 2 HOH HOH 40 A HOH 41 2 HOH HOH 41 A HOH 42 2 HOH HOH 42 A HOH 43 2 HOH HOH 43 A HOH 44 2 HOH HOH 44 A HOH 45 2 HOH HOH 45 A HOH 49 2 HOH HOH 49 A HOH 50 2 HOH HOH 50 A HOH 52 2 HOH HOH 52 A HOH 54 2 HOH HOH 54 A HOH 55 2 HOH HOH 55 A HOH 56 2 HOH HOH 56 A HOH 58 2 HOH HOH 58 A HOH 62 2 HOH HOH 62 A HOH 64 2 HOH HOH 64 A HOH 65 2 HOH HOH 65 A HOH 72 2 HOH HOH 72 A HOH 73 2 HOH HOH 73 A HOH 75 2 HOH HOH 75 A HOH 78 2 HOH HOH 78 A HOH 81 2 HOH HOH 81 A HOH 82 2 HOH HOH 82 A HOH 88 2 HOH HOH 88 A HOH 90 2 HOH HOH 90 A HOH 91 2 HOH HOH 91 A HOH 93 2 HOH HOH 93 A HOH 94 2 HOH HOH 94 A HOH 96 2 HOH HOH 96 A HOH 97 2 HOH HOH 97 A HOH 103 2 HOH HOH 103 A HOH 106 2 HOH HOH 106 A HOH 109 2 HOH HOH 109 A HOH 25 2 HOH HOH 25 B HOH 27 2 HOH HOH 27 B HOH 28 2 HOH HOH 28 B HOH 31 2 HOH HOH 31 B HOH 33 2 HOH HOH 33 B HOH 35 2 HOH HOH 35 B HOH 36 2 HOH HOH 36 B HOH 39 2 HOH HOH 39 B HOH 46 2 HOH HOH 46 B HOH 47 2 HOH HOH 47 B HOH 48 2 HOH HOH 48 B HOH 51 2 HOH HOH 51 B HOH 53 2 HOH HOH 53 B HOH 57 2 HOH HOH 57 B HOH 59 2 HOH HOH 59 B HOH 60 2 HOH HOH 60 B HOH 61 2 HOH HOH 61 B HOH 63 2 HOH HOH 63 B HOH 66 2 HOH HOH 66 B HOH 67 2 HOH HOH 67 B HOH 68 2 HOH HOH 68 B HOH 69 2 HOH HOH 69 B HOH 70 2 HOH HOH 70 B HOH 71 2 HOH HOH 71 B HOH 74 2 HOH HOH 74 B HOH 76 2 HOH HOH 76 B HOH 77 2 HOH HOH 77 B HOH 79 2 HOH HOH 79 B HOH 80 2 HOH HOH 80 B HOH 83 2 HOH HOH 83 B HOH 84 2 HOH HOH 84 B HOH 85 2 HOH HOH 85 B HOH 86 2 HOH HOH 86 B HOH 87 2 HOH HOH 87 B HOH 89 2 HOH HOH 89 B HOH 92 2 HOH HOH 92 B HOH 95 2 HOH HOH 95 B HOH 98 2 HOH HOH 98 B HOH 99 2 HOH HOH 99 B HOH 100 2 HOH HOH 100 B HOH 101 2 HOH HOH 101 B HOH 102 2 HOH HOH 102 B HOH 104 2 HOH HOH 104 B HOH 105 2 HOH HOH 105 B HOH 107 2 HOH HOH 107 B HOH 108 2 HOH HOH 108 B C 1 n 1 DC 1 A G 2 n 2 DG 2 A T 3 n 3 DT 3 A G 4 n 4 DG 4 A A 5 n 5 DA 5 A A 6 n 6 DA 6 A T 7 n 7 DT 7 A T 8 n 8 DT 8 A C 9 n 9 DC 9 A A 10 n 10 DA 10 A C 11 n 11 DC 11 A G 12 n 12 DG 12 A C 13 n 1 DC 13 B G 14 n 2 DG 14 B T 15 n 3 DT 15 B G 16 n 4 DG 16 B A 17 n 5 DA 17 B A 18 n 6 DA 18 B T 19 n 7 DT 19 B T 20 n 8 DT 20 B C 21 n 9 DC 21 B A 22 n 10 DA 22 B C 23 n 11 DC 23 B G 24 n 12 DG 24 B author_defined_assembly 2 dimeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 A A OP2 O DT HOH 7 41 2.19 1 -7.59 0.80 102.40 94.81 A A A C3' C2' C1' DC DC DC 1 1 1 N 1 -8.54 0.80 105.90 97.36 A A A O4' C1' C2' DC DC DC 1 1 1 N 1 7.55 0.30 108.30 115.85 A A A O4' C1' N1 DC DC DC 1 1 1 N 1 3.10 0.50 119.90 123.00 A A A C2 N3 C4 DC DC DC 1 1 1 N 1 -2.78 0.40 121.90 119.12 A A A N3 C4 C5 DC DC DC 1 1 1 N 1 -12.83 1.50 119.60 106.77 A A A OP1 P OP2 DG DG DG 2 2 2 N 1 4.10 0.30 108.30 112.40 A A A O4' C1' N9 DG DG DG 2 2 2 N 1 3.69 0.50 111.50 115.19 A A A C5 C6 N1 DG DG DG 2 2 2 N 1 -5.75 0.90 116.20 110.45 A A A N1 C2 N2 DG DG DG 2 2 2 N 1 -14.88 1.50 119.60 104.72 A A A OP1 P OP2 DT DT DT 3 3 3 N 1 -4.80 0.80 109.40 104.60 A A A O5' C5' C4' DT DT DT 3 3 3 N 1 -4.99 0.80 105.90 100.91 A A A O4' C1' C2' DT DT DT 3 3 3 N 1 -4.28 0.60 127.20 122.92 A A A C2 N3 C4 DT DT DT 3 3 3 N 1 3.98 0.60 115.20 119.18 A A A N3 C4 C5 DT DT DT 3 3 3 N 1 -4.21 0.60 119.90 115.69 A A A N3 C4 O4 DT DT DT 3 3 3 N 1 9.29 1.20 110.70 119.99 A A A O5' P OP2 DG DG DG 4 4 4 N 1 -11.57 1.60 120.90 109.33 A A A P O5' C5' DG DG DG 4 4 4 N 1 6.73 1.10 109.80 116.53 A A A C5' C4' O4' DG DG DG 4 4 4 N 1 5.56 0.30 108.30 113.86 A A A O4' C1' N9 DG DG DG 4 4 4 N 1 -12.06 1.50 119.60 107.54 A A A OP1 P OP2 DA DA DA 5 5 5 N 1 8.17 1.20 110.70 118.87 A A A O5' P OP1 DA DA DA 5 5 5 N 1 1.88 0.30 108.30 110.18 A A A O4' C1' N9 DA DA DA 5 5 5 N 1 12.11 1.20 110.70 122.81 A A A O5' P OP2 DA DA DA 6 6 6 N 1 -5.08 0.80 109.40 104.32 A A A O5' C5' C4' DT DT DT 7 7 7 N 1 -11.88 1.60 120.90 109.02 A A A P O5' C5' DT DT DT 7 7 7 N 1 -6.94 1.00 110.10 103.16 A A A C1' O4' C4' DT DT DT 7 7 7 N 1 3.61 0.60 114.60 118.21 A A A N1 C2 N3 DT DT DT 7 7 7 N 1 -4.50 0.60 127.20 122.70 A A A C2 N3 C4 DT DT DT 7 7 7 N 1 9.34 1.20 119.70 129.04 A A A C3' O3' P DT DT DT 7 7 8 Y 1 8.89 1.20 110.70 119.59 A A A O5' P OP2 DT DT DT 8 8 8 N 1 -4.87 0.80 102.40 97.53 A A A C3' C2' C1' DT DT DT 8 8 8 N 1 -5.19 0.80 105.90 100.71 A A A O4' C1' C2' DT DT DT 8 8 8 N 1 3.66 0.30 108.30 111.96 A A A O4' C1' N1 DT DT DT 8 8 8 N 1 3.63 0.60 114.60 118.23 A A A N1 C2 N3 DT DT DT 8 8 8 N 1 -4.99 0.60 127.20 122.21 A A A C2 N3 C4 DT DT DT 8 8 8 N 1 3.86 0.60 115.20 119.06 A A A N3 C4 C5 DT DT DT 8 8 8 N 1 16.60 1.20 119.70 136.30 A A A C3' O3' P DT DT DC 8 8 9 Y 1 8.96 1.20 110.70 119.66 A A A O5' P OP2 DC DC DC 9 9 9 N 1 -17.38 1.60 120.90 103.52 A A A P O5' C5' DC DC DC 9 9 9 N 1 -6.44 0.70 108.00 101.56 A A A O4' C1' N1 DC DC DC 9 9 9 N 1 -5.86 0.80 102.40 96.54 A A A C3' C2' C1' DA DA DA 10 10 10 N 1 10.63 0.30 108.30 118.93 A A A O4' C1' N9 DA DA DA 10 10 10 N 1 -3.20 0.50 129.30 126.10 A A A N1 C2 N3 DA DA DA 10 10 10 N 1 -7.84 0.80 109.40 101.56 A A A O5' C5' C4' DC DC DC 11 11 11 N 1 -6.52 0.70 108.00 101.48 A A A O4' C1' N1 DC DC DC 11 11 11 N 1 3.79 0.60 118.90 122.69 A A A N1 C2 O2 DC DC DC 11 11 11 N 1 -5.33 0.80 109.40 104.07 A A A O5' C5' C4' DG DG DG 12 12 12 N 1 8.35 1.20 102.50 110.85 A A A C3' C2' C1' DG DG DG 12 12 12 N 1 9.05 0.30 108.30 117.35 A A A O4' C1' N9 DG DG DG 12 12 12 N 1 2.37 0.30 108.30 110.67 B B B O4' C1' N1 DC DC DC 13 13 13 N 1 -2.60 0.40 121.90 119.30 B B B N3 C4 C5 DC DC DC 13 13 13 N 1 8.73 1.10 110.50 119.23 B B B O3' P OP1 DC DG DG 13 14 14 Y 1 1.80 0.30 108.30 110.10 B B B O4' C1' N1 DT DT DT 15 15 15 N 1 -5.26 0.60 127.20 121.94 B B B C2 N3 C4 DT DT DT 15 15 15 N 1 4.41 0.60 115.20 119.61 B B B N3 C4 C5 DT DT DT 15 15 15 N 1 -12.58 1.20 119.70 107.12 B B B C3' O3' P DT DT DG 15 15 16 Y 1 10.07 1.20 110.70 120.77 B B B O5' P OP2 DG DG DG 16 16 16 N 1 2.27 0.30 108.30 110.57 B B B O4' C1' N9 DG DG DG 16 16 16 N 1 3.09 0.50 111.50 114.59 B B B C5 C6 N1 DG DG DG 16 16 16 N 1 15.37 1.20 119.70 135.07 B B B C3' O3' P DG DG DA 16 16 17 Y 1 -9.16 1.50 119.60 110.44 B B B OP1 P OP2 DA DA DA 17 17 17 N 1 8.33 1.20 110.70 119.03 B B B O5' P OP2 DA DA DA 17 17 17 N 1 4.56 0.30 108.30 112.86 B B B O4' C1' N9 DA DA DA 17 17 17 N 1 -3.76 0.50 129.30 125.54 B B B N1 C2 N3 DA DA DA 17 17 17 N 1 11.75 1.20 119.70 131.45 B B B C3' O3' P DA DA DA 17 17 18 Y 1 -10.64 1.50 119.60 108.96 B B B OP1 P OP2 DA DA DA 18 18 18 N 1 9.25 1.20 110.70 119.95 B B B O5' P OP2 DA DA DA 18 18 18 N 1 3.68 0.60 118.60 122.28 B B B C6 N1 C2 DA DA DA 18 18 18 N 1 -3.48 0.50 129.30 125.82 B B B N1 C2 N3 DA DA DA 18 18 18 N 1 7.18 1.10 110.50 117.68 B B B O3' P OP1 DA DT DT 18 19 19 Y 1 7.74 1.20 110.70 118.44 B B B O5' P OP2 DT DT DT 19 19 19 N 1 -12.04 1.60 120.90 108.86 B B B P O5' C5' DT DT DT 19 19 19 N 1 -5.27 0.60 127.20 121.93 B B B C2 N3 C4 DT DT DT 19 19 19 N 1 4.00 0.60 115.20 119.20 B B B N3 C4 C5 DT DT DT 19 19 19 N 1 -9.93 1.50 119.60 109.67 B B B OP1 P OP2 DT DT DT 20 20 20 N 1 8.67 1.10 109.80 118.47 B B B C5' C4' O4' DT DT DT 20 20 20 N 1 -5.34 0.80 102.40 97.06 B B B C3' C2' C1' DT DT DT 20 20 20 N 1 -4.43 0.60 127.20 122.77 B B B C2 N3 C4 DT DT DT 20 20 20 N 1 3.79 0.60 115.20 118.99 B B B N3 C4 C5 DT DT DT 20 20 20 N 1 -9.97 1.50 119.60 109.63 B B B OP1 P OP2 DC DC DC 21 21 21 N 1 4.59 0.30 108.30 112.89 B B B O4' C1' N1 DC DC DC 21 21 21 N 1 -2.41 0.40 121.90 119.49 B B B N3 C4 C5 DC DC DC 21 21 21 N 1 7.51 1.20 110.70 118.21 B B B O5' P OP2 DA DA DA 22 22 22 N 1 -7.63 0.80 109.40 101.77 B B B O5' C5' C4' DA DA DA 22 22 22 N 1 -7.53 0.80 102.40 94.87 B B B C3' C2' C1' DA DA DA 22 22 22 N 1 8.57 0.30 108.30 116.87 B B B O4' C1' N9 DA DA DA 22 22 22 N 1 -3.30 0.50 117.70 114.40 B B B C5 C6 N1 DA DA DA 22 22 22 N 1 -9.58 0.80 102.40 92.82 B B B C3' C2' C1' DC DC DC 23 23 23 N 1 -6.70 0.80 105.90 99.20 B B B O4' C1' C2' DC DC DC 23 23 23 N 1 14.11 0.30 108.30 122.41 B B B O4' C1' N1 DC DC DC 23 23 23 N 1 -2.52 0.40 121.90 119.38 B B B N3 C4 C5 DC DC DC 23 23 23 N 1 10.81 0.60 118.90 129.71 B B B N1 C2 O2 DC DC DC 23 23 23 N 1 -9.59 0.70 121.90 112.31 B B B N3 C2 O2 DC DC DC 23 23 23 N 1 8.08 1.20 110.70 118.78 B B B O5' P OP2 DG DG DG 24 24 24 N 1 3.10 0.50 106.80 109.90 B B B O4' C1' C2' DG DG DG 24 24 24 N 1 A A N1 C2 DG DG 2 2 -0.078 0.008 1.373 1.295 N 1 A A C2 N3 DG DG 2 2 0.076 0.008 1.323 1.399 N 1 A A C2 N2 DG DG 2 2 -0.065 0.010 1.341 1.276 N 1 A A O4' C1' DT DT 7 7 0.074 0.011 1.420 1.494 N 1 A A O4' C1' DC DC 11 11 0.091 0.011 1.420 1.511 N 1 A A C3' C2' DG DG 12 12 -0.063 0.008 1.516 1.453 N 1 A A C2' C1' DG DG 12 12 -0.122 0.010 1.518 1.396 N 1 A A O3' C3' DG DG 12 12 -0.065 0.006 1.419 1.354 N 1 B B P O5' DT DT 19 19 0.074 0.010 1.593 1.667 N 0.1700000 2.700 10.000 1532 1 2.000 TR isotropic TR isotropic 2.700 10.000 85 571 0 486 0 0.013 0.029 0.031 0.038 fix fix 2.100 1D28 2075 2.000 1 refinement NUCLSQ CRYSTAL AND MOLECULAR STRUCTURE OF A DNA FRAGMENT: D(CGTGAATTCACG) 1 N N 1 N N 2 N N 2 N N hydrog WATSON-CRICK A DC 1 A N3 DC 1 1_555 B DG 24 B N1 DG 12 1_555 hydrog WATSON-CRICK A DC 1 A N4 DC 1 1_555 B DG 24 B O6 DG 12 1_555 hydrog WATSON-CRICK A DC 1 A O2 DC 1 1_555 B DG 24 B N2 DG 12 1_555 hydrog WATSON-CRICK A DG 2 A N1 DG 2 1_555 B DC 23 B N3 DC 11 1_555 hydrog WATSON-CRICK A DG 2 A N2 DG 2 1_555 B DC 23 B O2 DC 11 1_555 hydrog WATSON-CRICK A DG 2 A O6 DG 2 1_555 B DC 23 B N4 DC 11 1_555 hydrog WATSON-CRICK A DT 3 A N3 DT 3 1_555 B DA 22 B N1 DA 10 1_555 hydrog WATSON-CRICK A DT 3 A O4 DT 3 1_555 B DA 22 B N6 DA 10 1_555 hydrog WATSON-CRICK A DG 4 A N1 DG 4 1_555 B DC 21 B N3 DC 9 1_555 hydrog WATSON-CRICK A DG 4 A N2 DG 4 1_555 B DC 21 B O2 DC 9 1_555 hydrog WATSON-CRICK A DG 4 A O6 DG 4 1_555 B DC 21 B N4 DC 9 1_555 hydrog WATSON-CRICK A DA 5 A N1 DA 5 1_555 B DT 20 B N3 DT 8 1_555 hydrog WATSON-CRICK A DA 5 A N6 DA 5 1_555 B DT 20 B O4 DT 8 1_555 hydrog WATSON-CRICK A DA 6 A N1 DA 6 1_555 B DT 19 B N3 DT 7 1_555 hydrog WATSON-CRICK A DA 6 A N6 DA 6 1_555 B DT 19 B O4 DT 7 1_555 hydrog WATSON-CRICK A DT 7 A N3 DT 7 1_555 B DA 18 B N1 DA 6 1_555 hydrog WATSON-CRICK A DT 7 A O4 DT 7 1_555 B DA 18 B N6 DA 6 1_555 hydrog WATSON-CRICK A DT 8 A N3 DT 8 1_555 B DA 17 B N1 DA 5 1_555 hydrog WATSON-CRICK A DT 8 A O4 DT 8 1_555 B DA 17 B N6 DA 5 1_555 hydrog WATSON-CRICK A DC 9 A N3 DC 9 1_555 B DG 16 B N1 DG 4 1_555 hydrog WATSON-CRICK A DC 9 A N4 DC 9 1_555 B DG 16 B O6 DG 4 1_555 hydrog WATSON-CRICK A DC 9 A O2 DC 9 1_555 B DG 16 B N2 DG 4 1_555 hydrog WATSON-CRICK A DA 10 A N1 DA 10 1_555 B DT 15 B N3 DT 3 1_555 hydrog WATSON-CRICK A DA 10 A N6 DA 10 1_555 B DT 15 B O4 DT 3 1_555 hydrog WATSON-CRICK A DC 11 A N3 DC 11 1_555 B DG 14 B N1 DG 2 1_555 hydrog WATSON-CRICK A DC 11 A N4 DC 11 1_555 B DG 14 B O6 DG 2 1_555 hydrog WATSON-CRICK A DC 11 A O2 DC 11 1_555 B DG 14 B N2 DG 2 1_555 hydrog WATSON-CRICK A DG 12 A N1 DG 12 1_555 B DC 13 B N3 DC 1 1_555 hydrog WATSON-CRICK A DG 12 A N2 DG 12 1_555 B DC 13 B O2 DC 1 1_555 hydrog WATSON-CRICK A DG 12 A O6 DG 12 1_555 B DC 13 B N4 DC 1 1_555 DNA B-DNA, DOUBLE HELIX, DNA 1D28 PDB 1 1D28 1 12 1D28 1 12 1D28 A 1 1 12 13 24 1D28 13 24 1D28 B 1 1 12 19 P 21 21 21