0.037202
0.000000
0.000000
0.000000
0.037202
0.000000
0.000000
0.000000
0.012107
0.00000
0.00000
0.00000
Gao, Q.
Williams, L.D.
Egli, M.
Rabinovich, D.
Chen, S.-L.
Quigley, G.J.
Rich, A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
26.880
26.880
82.600
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C46 H50 N6 O2 2
718.928
DITERCALINIUM
non-polymer
H2 O
18.015
WATER
non-polymer
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
N
13
N
N
N
14
N
C
N
15
N
O
N
16
N
N
N
17
N
C
N
18
N
N
N
19
N
C
N
20
N
C
N
21
N
H
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
O
N
36
N
P
N
37
N
O
N
38
N
O
N
39
N
O
N
40
N
C
N
41
R
C
N
42
N
O
N
43
S
C
N
44
N
O
N
45
N
C
N
46
R
C
Y
47
N
N
Y
48
N
C
Y
49
N
N
Y
50
N
C
N
51
N
C
N
52
N
O
N
53
N
N
N
54
N
C
N
55
N
N
N
56
N
N
Y
57
N
C
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
Y
72
N
C
Y
73
N
N
Y
74
N
C
Y
75
N
C
Y
76
N
C
Y
77
N
C
Y
78
N
N
Y
79
N
C
Y
80
N
C
Y
81
N
C
N
82
N
O
Y
83
N
C
Y
84
N
C
Y
85
N
C
Y
86
N
C
Y
87
N
C
Y
88
N
C
Y
89
N
C
N
90
N
C
N
91
N
C
N
92
N
C
N
93
N
N
N
94
N
C
N
95
N
C
N
96
N
C
N
97
N
C
N
98
N
C
Y
99
N
C
Y
100
N
N
Y
101
N
C
Y
102
N
C
Y
103
N
C
Y
104
N
C
Y
105
N
N
Y
106
N
C
Y
107
N
C
Y
108
N
C
N
109
N
O
Y
110
N
C
Y
111
N
C
Y
112
N
C
Y
113
N
C
Y
114
N
C
Y
115
N
C
Y
116
N
C
N
117
N
C
N
118
N
C
N
119
N
C
N
120
N
N
N
121
N
C
N
122
N
C
N
123
N
C
N
124
N
C
N
125
N
C
N
126
N
H
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
H
N
146
N
H
N
147
N
H
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
H
N
159
N
H
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
O
N
177
N
H
N
178
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
doub
N
27
N
sing
N
28
N
doub
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
doub
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
Y
59
N
sing
Y
60
N
sing
Y
61
N
doub
N
62
N
sing
Y
63
N
sing
N
64
N
sing
Y
65
N
doub
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
Y
75
N
doub
Y
76
N
sing
N
77
N
sing
Y
78
N
sing
N
79
N
sing
Y
80
N
doub
N
81
N
sing
Y
82
N
sing
N
83
N
sing
Y
84
N
doub
Y
85
N
sing
N
86
N
sing
Y
87
N
sing
N
88
N
sing
Y
89
N
sing
Y
90
N
sing
N
91
N
sing
Y
92
N
doub
Y
93
N
sing
N
94
N
sing
Y
95
N
sing
N
96
N
sing
N
97
N
sing
Y
98
N
doub
N
99
N
sing
Y
100
N
sing
N
101
N
sing
Y
102
N
doub
Y
103
N
doub
Y
104
N
doub
Y
105
N
sing
Y
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
Y
132
N
doub
Y
133
N
sing
N
134
N
sing
Y
135
N
sing
N
136
N
sing
Y
137
N
doub
N
138
N
sing
Y
139
N
sing
N
140
N
sing
Y
141
N
doub
Y
142
N
sing
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
Y
147
N
sing
N
148
N
sing
Y
149
N
doub
Y
150
N
sing
N
151
N
sing
Y
152
N
sing
N
153
N
sing
N
154
N
sing
Y
155
N
doub
N
156
N
sing
Y
157
N
sing
N
158
N
sing
Y
159
N
doub
Y
160
N
doub
Y
161
N
doub
Y
162
N
sing
Y
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
US
Proc.Natl.Acad.Sci.USA
PNASA6
0040
0027-8424
88
2422
2426
10.1073/pnas.88.6.2422
2006181
Drug-induced DNA repair: X-ray structure of a DNA-ditercalinium complex.
1991
US
Biochemistry
BICHAW
0033
0006-2960
31
4315
4324
DNA-Ditercalinium Interactions: Implications for Recognition of Damaged DNA
1992
10.2210/pdb1d32/pdb
pdb_00001d32
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
273.00
1
DIFFRACTOMETER
RIGAKU AFC-5
x-ray
1
1.0
ROTATING ANODE
RIGAKU RU200
1191.818
DNA (5'-D(*CP*GP*CP*G)-3')
2
syn
polymer
718.928
DITERCALINIUM
1
syn
non-polymer
18.015
water
83
nat
water
no
no
(DC)(DG)(DC)(DG)
CGCG
A,B
polydeoxyribonucleotide
n
n
n
n
3.13
60.70
VAPOR DIFFUSION, SITTING DROP
6.00
pH 6.00, VAPOR DIFFUSION, SITTING DROP
ROOM TEMPERATURE
WATER
1
MPD
1
NA CACODYLATE
1
NH4 ACETATE
1
SPERMINE
1
MGCL2
1
WATER
2
MPD
2
-4.617
1
19
A
1
B
8
3.109
A_DC1:DG8_B
1
-7.918
0.105
0.077
-0.150
-6.748
1
19
A
2
B
7
1.489
A_DG2:DC7_B
2
1.251
-0.161
-0.457
-0.246
-5.517
1
19
A
3
B
6
-1.180
A_DC3:DG6_B
3
8.242
0.100
-0.084
-0.317
-4.803
1
19
A
4
B
5
0.229
A_DG4:DC5_B
4
-5.227
0.005
0.000
-0.276
6.881
22.476
A
A
1
2
-1.583
B
B
8
7
6.913
-0.616
-0.010
-0.125
AA_DC1DG2:DC7DG8_BB
1
2.185
-5.616
22.362
0.159
1.729
3.344
30.404
A
A
2
3
-16.589
B
B
7
6
3.616
-8.564
0.204
0.282
AA_DG2DC3:DG6DC7_BB
2
-3.841
7.440
28.951
2.411
-1.230
6.763
20.908
A
A
3
4
-2.694
B
B
6
5
6.740
-0.977
-0.750
-0.469
AA_DC3DG4:DC5DG6_BB
3
-0.257
0.709
20.884
-0.433
1.840
chem_comp_atom
chem_comp_bond
database_2
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
1992-04-15
1
1
2008-05-22
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
BNL
Y
NDB
1991-01-23
REL
DIT
DITERCALINIUM
HOH
water
DIT
9
2
DIT
DIT
9
A
HOH
12
3
HOH
HOH
12
A
HOH
16
3
HOH
HOH
16
A
HOH
18
3
HOH
HOH
18
A
HOH
19
3
HOH
HOH
19
A
HOH
20
3
HOH
HOH
20
A
HOH
21
3
HOH
HOH
21
A
HOH
25
3
HOH
HOH
25
A
HOH
26
3
HOH
HOH
26
A
HOH
29
3
HOH
HOH
29
A
HOH
34
3
HOH
HOH
34
A
HOH
36
3
HOH
HOH
36
A
HOH
37
3
HOH
HOH
37
A
HOH
41
3
HOH
HOH
41
A
HOH
45
3
HOH
HOH
45
A
HOH
47
3
HOH
HOH
47
A
HOH
49
3
HOH
HOH
49
A
HOH
51
3
HOH
HOH
51
A
HOH
58
3
HOH
HOH
58
A
HOH
59
3
HOH
HOH
59
A
HOH
63
3
HOH
HOH
63
A
HOH
64
3
HOH
HOH
64
A
HOH
65
3
HOH
HOH
65
A
HOH
66
3
HOH
HOH
66
A
HOH
67
3
HOH
HOH
67
A
HOH
68
3
HOH
HOH
68
A
HOH
69
3
HOH
HOH
69
A
HOH
70
3
HOH
HOH
70
A
HOH
71
3
HOH
HOH
71
A
HOH
72
3
HOH
HOH
72
A
HOH
73
3
HOH
HOH
73
A
HOH
74
3
HOH
HOH
74
A
HOH
77
3
HOH
HOH
77
A
HOH
80
3
HOH
HOH
80
A
HOH
81
3
HOH
HOH
81
A
HOH
82
3
HOH
HOH
82
A
HOH
83
3
HOH
HOH
83
A
HOH
85
3
HOH
HOH
85
A
HOH
86
3
HOH
HOH
86
A
HOH
89
3
HOH
HOH
89
A
HOH
10
3
HOH
HOH
10
B
HOH
11
3
HOH
HOH
11
B
HOH
13
3
HOH
HOH
13
B
HOH
14
3
HOH
HOH
14
B
HOH
15
3
HOH
HOH
15
B
HOH
17
3
HOH
HOH
17
B
HOH
22
3
HOH
HOH
22
B
HOH
23
3
HOH
HOH
23
B
HOH
24
3
HOH
HOH
24
B
HOH
27
3
HOH
HOH
27
B
HOH
28
3
HOH
HOH
28
B
HOH
30
3
HOH
HOH
30
B
HOH
31
3
HOH
HOH
31
B
HOH
32
3
HOH
HOH
32
B
HOH
33
3
HOH
HOH
33
B
HOH
35
3
HOH
HOH
35
B
HOH
38
3
HOH
HOH
38
B
HOH
39
3
HOH
HOH
39
B
HOH
40
3
HOH
HOH
40
B
HOH
42
3
HOH
HOH
42
B
HOH
43
3
HOH
HOH
43
B
HOH
44
3
HOH
HOH
44
B
HOH
46
3
HOH
HOH
46
B
HOH
48
3
HOH
HOH
48
B
HOH
50
3
HOH
HOH
50
B
HOH
52
3
HOH
HOH
52
B
HOH
53
3
HOH
HOH
53
B
HOH
54
3
HOH
HOH
54
B
HOH
55
3
HOH
HOH
55
B
HOH
56
3
HOH
HOH
56
B
HOH
57
3
HOH
HOH
57
B
HOH
60
3
HOH
HOH
60
B
HOH
61
3
HOH
HOH
61
B
HOH
62
3
HOH
HOH
62
B
HOH
75
3
HOH
HOH
75
B
HOH
76
3
HOH
HOH
76
B
HOH
78
3
HOH
HOH
78
B
HOH
79
3
HOH
HOH
79
B
HOH
84
3
HOH
HOH
84
B
HOH
87
3
HOH
HOH
87
B
HOH
88
3
HOH
HOH
88
B
HOH
90
3
HOH
HOH
90
B
HOH
91
3
HOH
HOH
91
B
HOH
92
3
HOH
HOH
92
B
C
1
n
1
DC
1
A
G
2
n
2
DG
2
A
C
3
n
3
DC
3
A
G
4
n
4
DG
4
A
C
5
n
1
DC
5
B
G
6
n
2
DG
6
B
C
7
n
3
DC
7
B
G
8
n
4
DG
8
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
-3.40
0.40
104.50
101.10
A
A
A
O4'
C4'
C3'
DC
DC
DC
1
1
1
N
1
5.24
0.70
110.30
115.54
A
A
A
C1'
O4'
C4'
DC
DC
DC
1
1
1
N
1
12.94
1.40
114.30
127.24
A
A
A
N1
C1'
C2'
DC
DC
DC
1
1
1
N
1
-5.90
0.70
108.00
102.10
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
N
1
3.21
0.50
119.90
123.11
A
A
A
C2
N3
C4
DC
DC
DC
1
1
1
N
1
-3.25
0.40
121.90
118.65
A
A
A
N3
C4
C5
DC
DC
DC
1
1
1
N
1
5.30
0.60
118.90
124.20
A
A
A
N1
C2
O2
DC
DC
DC
1
1
1
N
1
6.50
0.70
120.20
126.70
A
A
A
C5
C4
N4
DC
DC
DC
1
1
1
N
1
9.68
1.50
119.60
129.28
A
A
A
OP1
P
OP2
DG
DG
DG
2
2
2
N
1
-7.13
0.90
105.70
98.57
A
A
A
O5'
P
OP2
DG
DG
DG
2
2
2
N
1
-13.53
1.60
120.90
107.37
A
A
A
P
O5'
C5'
DG
DG
DG
2
2
2
N
1
-2.71
0.40
104.50
101.79
A
A
A
O4'
C4'
C3'
DG
DG
DG
2
2
2
N
1
6.49
0.30
108.30
114.79
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
1
-6.98
0.60
125.10
118.12
A
A
A
C6
N1
C2
DG
DG
DG
2
2
2
N
1
6.49
0.60
123.90
130.39
A
A
A
N1
C2
N3
DG
DG
DG
2
2
2
N
1
6.53
0.50
111.50
118.03
A
A
A
C5
C6
N1
DG
DG
DG
2
2
2
N
1
-10.54
0.70
119.90
109.36
A
A
A
N3
C2
N2
DG
DG
DG
2
2
2
N
1
-5.40
0.60
128.60
123.20
A
A
A
C5
C6
O6
DG
DG
DG
2
2
2
N
1
-14.30
1.60
120.90
106.60
A
A
A
P
O5'
C5'
DC
DC
DC
3
3
3
N
1
5.62
0.50
119.90
125.52
A
A
A
C2
N3
C4
DC
DC
DC
3
3
3
N
1
-5.33
0.40
121.90
116.57
A
A
A
N3
C4
C5
DC
DC
DC
3
3
3
N
1
3.61
0.60
118.90
122.51
A
A
A
N1
C2
O2
DC
DC
DC
3
3
3
N
1
-8.97
0.80
109.40
100.43
A
A
A
O5'
C5'
C4'
DG
DG
DG
4
4
4
N
1
-14.82
1.60
120.90
106.08
A
A
A
P
O5'
C5'
DG
DG
DG
4
4
4
N
1
-5.60
0.80
105.90
100.30
A
A
A
O4'
C1'
C2'
DG
DG
DG
4
4
4
N
1
-7.47
0.60
125.10
117.63
A
A
A
C6
N1
C2
DG
DG
DG
4
4
4
N
1
5.98
0.60
123.90
129.88
A
A
A
N1
C2
N3
DG
DG
DG
4
4
4
N
1
7.71
0.50
111.50
119.21
A
A
A
C5
C6
N1
DG
DG
DG
4
4
4
N
1
-11.16
0.70
119.90
108.74
A
A
A
N3
C2
N2
DG
DG
DG
4
4
4
N
1
-5.72
0.60
128.60
122.88
A
A
A
C5
C6
O6
DG
DG
DG
4
4
4
N
1
-5.03
0.40
104.50
99.47
B
B
B
O4'
C4'
C3'
DC
DC
DC
5
5
5
N
1
-5.25
0.70
108.00
102.75
B
B
B
O4'
C1'
N1
DC
DC
DC
5
5
5
N
1
3.88
0.50
119.90
123.78
B
B
B
C2
N3
C4
DC
DC
DC
5
5
5
N
1
-4.61
0.40
121.90
117.29
B
B
B
N3
C4
C5
DC
DC
DC
5
5
5
N
1
3.41
0.50
121.00
124.41
B
B
B
C5
C6
N1
DC
DC
DC
5
5
5
N
1
4.63
0.60
118.90
123.53
B
B
B
N1
C2
O2
DC
DC
DC
5
5
5
N
1
-6.45
0.90
105.70
99.25
B
B
B
O5'
P
OP1
DG
DG
DG
6
6
6
N
1
-9.73
1.60
120.90
111.17
B
B
B
P
O5'
C5'
DG
DG
DG
6
6
6
N
1
4.20
0.30
108.30
112.50
B
B
B
O4'
C1'
N9
DG
DG
DG
6
6
6
N
1
-5.53
0.60
125.10
119.57
B
B
B
C6
N1
C2
DG
DG
DG
6
6
6
N
1
5.08
0.60
123.90
128.98
B
B
B
N1
C2
N3
DG
DG
DG
6
6
6
N
1
5.98
0.50
111.50
117.48
B
B
B
C5
C6
N1
DG
DG
DG
6
6
6
N
1
-10.30
0.70
119.90
109.60
B
B
B
N3
C2
N2
DG
DG
DG
6
6
6
N
1
-5.54
0.60
128.60
123.06
B
B
B
C5
C6
O6
DG
DG
DG
6
6
6
N
1
14.65
1.20
119.70
134.35
B
B
B
C3'
O3'
P
DG
DG
DC
6
6
7
Y
1
-7.51
0.90
105.70
98.19
B
B
B
O5'
P
OP1
DC
DC
DC
7
7
7
N
1
-16.23
1.60
120.90
104.67
B
B
B
P
O5'
C5'
DC
DC
DC
7
7
7
N
1
3.05
0.30
108.30
111.35
B
B
B
O4'
C1'
N1
DC
DC
DC
7
7
7
N
1
-2.74
0.40
121.90
119.16
B
B
B
N3
C4
C5
DC
DC
DC
7
7
7
N
1
5.27
0.60
118.90
124.17
B
B
B
N1
C2
O2
DC
DC
DC
7
7
7
N
1
5.62
0.70
120.20
125.82
B
B
B
C5
C4
N4
DC
DC
DC
7
7
7
N
1
-6.81
1.10
118.80
111.99
B
B
B
C2
N1
C1'
DC
DC
DC
7
7
7
N
1
13.01
1.20
119.70
132.71
B
B
B
C3'
O3'
P
DC
DC
DG
7
7
8
Y
1
-7.23
0.60
125.10
117.87
B
B
B
C6
N1
C2
DG
DG
DG
8
8
8
N
1
5.66
0.60
123.90
129.56
B
B
B
N1
C2
N3
DG
DG
DG
8
8
8
N
1
6.98
0.50
111.50
118.48
B
B
B
C5
C6
N1
DG
DG
DG
8
8
8
N
1
-10.37
0.70
119.90
109.53
B
B
B
N3
C2
N2
DG
DG
DG
8
8
8
N
1
-4.99
0.60
128.60
123.61
B
B
B
C5
C6
O6
DG
DG
DG
8
8
8
N
1
A
A
P
O5'
DG
DG
2
2
0.062
0.010
1.593
1.655
N
1
A
A
C6
N1
DG
DG
2
2
-0.054
0.007
1.391
1.337
N
1
A
A
C2
N2
DG
DG
2
2
-0.109
0.010
1.341
1.232
N
1
A
A
C5'
C4'
DG
DG
4
4
0.043
0.007
1.512
1.555
N
1
A
A
C2'
C1'
DG
DG
4
4
0.071
0.010
1.519
1.590
N
1
A
A
C6
N1
DG
DG
4
4
-0.053
0.007
1.391
1.338
N
1
A
A
C2
N2
DG
DG
4
4
-0.107
0.010
1.341
1.234
N
1
B
B
P
O5'
DG
DG
6
6
0.061
0.010
1.593
1.654
N
1
B
B
O3'
C3'
DG
DG
6
6
-0.104
0.006
1.419
1.315
N
1
B
B
C6
N1
DG
DG
6
6
-0.061
0.007
1.391
1.330
N
1
B
B
C8
N9
DG
DG
6
6
-0.048
0.007
1.374
1.326
N
1
B
B
C2
N2
DG
DG
6
6
-0.106
0.010
1.341
1.235
N
1
B
B
P
O5'
DC
DC
7
7
0.069
0.010
1.593
1.662
N
1
B
B
N3
C4
DC
DC
7
7
0.062
0.007
1.335
1.397
N
1
B
B
O4'
C1'
DG
DG
8
8
0.112
0.011
1.420
1.532
N
1
B
B
N7
C8
DG
DG
8
8
0.039
0.006
1.305
1.344
N
1
B
B
C2
N2
DG
DG
8
8
-0.125
0.010
1.341
1.216
N
1
B
B
OP2
O
DC
HOH
7
43
1.80
1_555
5_655
1
B
B
OP2
O
DG
HOH
6
30
2.18
1_555
5_655
1
B
A
OP1
O
DC
HOH
7
89
2.19
1_555
5_645
0.2250000
1.700
2.000
542
1
3.000
TR
isotropic
TR
isotropic
TR
isotropic
1.700
2.000
83
295
54
158
0
0.019
fix
fix
fix
1.700
1D32
2211
3.000
1
refinement
NUCLSQ
DRUG-INDUCED DNA REPAIR: X-RAY STRUCTURE OF A DNA-DITERCALINIUM COMPLEX
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
B
DG
8
B
N1
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
B
DG
8
B
O6
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
B
DG
8
B
N2
DG
4
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
B
DC
7
B
N3
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
B
DC
7
B
O2
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
B
DC
7
B
N4
DC
3
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N3
DC
3
1_555
B
DG
6
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N4
DC
3
1_555
B
DG
6
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
3
A
O2
DC
3
1_555
B
DG
6
B
N2
DG
2
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N1
DG
4
1_555
B
DC
5
B
N3
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N2
DG
4
1_555
B
DC
5
B
O2
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
4
A
O6
DG
4
1_555
B
DC
5
B
N4
DC
1
1_555
DNA
RIGHT HANDED DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, DNA
1D32
PDB
1
1D32
1
4
1D32
1
4
1D32
A
1
1
4
5
8
1D32
5
8
1D32
B
1
1
4
BINDING SITE FOR RESIDUE DIT A 9
A
DIT
9
Software
13
A
DC
1
A
DC
1
13
1_555
A
DG
2
A
DG
2
13
1_555
A
DC
3
A
DC
3
13
1_555
A
DG
4
A
DG
4
13
1_555
A
HOH
18
D
HOH
13
1_555
A
HOH
41
D
HOH
13
1_555
A
HOH
69
D
HOH
13
1_555
B
DC
5
B
DC
1
13
1_555
B
DG
6
B
DG
2
13
1_555
B
DC
7
B
DC
3
13
5_655
B
DC
7
B
DC
3
13
1_555
B
DG
8
B
DG
4
13
5_655
B
DG
8
B
DG
4
13
1_555
92
P 41 21 2