13.66 9.425 19.817 22.485 A O5' DC 1 ATOM A O5' DC 1 1 1.00 1 O 12.53 9.590 20.946 23.373 A C5' DC 1 ATOM A C5' DC 1 1 1.00 1 C 12.19 11.040 20.946 23.807 A C4' DC 1 ATOM A C4' DC 1 1 1.00 1 C 11.65 11.267 19.826 24.612 A O4' DC 1 ATOM A O4' DC 1 1 1.00 1 O 12.06 12.060 20.840 22.679 A C3' DC 1 ATOM A C3' DC 1 1 1.00 1 C 12.82 13.175 21.695 22.872 A O3' DC 1 ATOM A O3' DC 1 1 1.00 1 O 11.76 12.479 19.359 22.694 A C2' DC 1 ATOM A C2' DC 1 1 1.00 1 C 10.68 12.351 19.018 24.173 A C1' DC 1 ATOM A C1' DC 1 1 1.00 1 C 9.59 11.968 17.618 24.298 A N1 DC 1 ATOM A N1 DC 1 1 1.00 1 N 9.11 12.974 16.679 24.408 A C2 DC 1 ATOM A C2 DC 1 1 1.00 1 C 8.99 14.139 17.062 24.424 A O2 DC 1 ATOM A O2 DC 1 1 1.00 1 O 8.80 12.605 15.369 24.455 A N3 DC 1 ATOM A N3 DC 1 1 1.00 1 N 8.73 11.306 14.980 24.434 A C4 DC 1 ATOM A C4 DC 1 1 1.00 1 C 8.49 11.012 13.684 24.481 A N4 DC 1 ATOM A N4 DC 1 1 1.00 1 N 8.85 10.266 15.961 24.345 A C5 DC 1 ATOM A C5 DC 1 1 1.00 1 C 9.33 10.641 17.238 24.298 A C6 DC 1 ATOM A C6 DC 1 1 1.00 1 C 17.26 13.726 22.899 21.999 A P DG 2 ATOM A P DG 1 2 1.00 1 P 17.34 14.673 23.595 22.940 A OP1 DG 2 ATOM A OP1 DG 1 2 1.00 1 O 16.65 12.605 23.671 21.420 A OP2 DG 2 ATOM A OP2 DG 1 2 1.00 1 O 13.46 14.514 22.097 20.814 A O5' DG 2 ATOM A O5' DG 1 2 1.00 1 O 12.60 15.718 21.365 21.090 A C5' DG 2 ATOM A C5' DG 1 2 1.00 1 C 12.44 16.056 20.614 19.831 A C4' DG 2 ATOM A C4' DG 1 2 1.00 1 C 11.71 15.288 19.418 19.763 A O4' DG 2 ATOM A O4' DG 1 2 1.00 1 O 12.44 15.766 21.349 18.531 A C3' DG 2 ATOM A C3' DG 1 2 1.00 1 C 14.05 16.811 21.027 17.606 A O3' DG 2 ATOM A O3' DG 1 2 1.00 1 O 11.91 14.433 20.770 18.107 A C2' DG 2 ATOM A C2' DG 1 2 1.00 1 C 10.94 14.754 19.314 18.447 A C1' DG 2 ATOM A C1' DG 1 2 1.00 1 C 9.99 13.572 18.473 18.332 A N9 DG 2 ATOM A N9 DG 1 2 1.00 1 N 9.67 12.253 18.800 18.301 A C8 DG 2 ATOM A C8 DG 1 2 1.00 1 C 9.67 11.451 17.783 18.160 A N7 DG 2 ATOM A N7 DG 1 2 1.00 1 N 9.15 12.309 16.679 18.066 A C5 DG 2 ATOM A C5 DG 1 2 1.00 1 C 8.96 12.060 15.307 17.878 A C6 DG 2 ATOM A C6 DG 1 2 1.00 1 C 9.23 10.965 14.729 17.789 A O6 DG 2 ATOM A O6 DG 1 2 1.00 1 O 8.47 13.186 14.525 17.867 A N1 DG 2 ATOM A N1 DG 1 2 1.00 1 N 8.30 14.435 15.059 17.977 A C2 DG 2 ATOM A C2 DG 1 2 1.00 1 C 7.81 15.458 14.201 17.951 A N2 DG 2 ATOM A N2 DG 1 2 1.00 1 N 8.65 14.709 16.350 18.118 A N3 DG 2 ATOM A N3 DG 1 2 1.00 1 N 9.29 13.606 17.087 18.160 A C4 DG 2 ATOM A C4 DG 1 2 1.00 1 C 21.18 17.881 21.930 16.854 A P DC 3 ATOM A P DC 1 3 1.00 1 P 19.46 18.406 23.084 17.595 A OP1 DC 3 ATOM A OP1 DC 1 3 1.00 1 O 21.64 16.861 22.360 15.741 A OP2 DC 3 ATOM A OP2 DC 1 3 1.00 1 O 15.58 18.948 20.943 16.232 A O5' DC 3 ATOM A O5' DC 1 3 1.00 1 O 14.87 19.946 20.228 17.016 A C5' DC 3 ATOM A C5' DC 1 3 1.00 1 C 14.15 19.851 18.795 16.540 A C4' DC 3 ATOM A C4' DC 1 3 1.00 1 C 13.89 18.512 18.325 16.665 A O4' DC 3 ATOM A O4' DC 1 3 1.00 1 O 13.97 20.197 18.588 15.067 A C3' DC 3 ATOM A C3' DC 1 3 1.00 1 C 14.04 21.544 18.261 14.936 A O3' DC 3 ATOM A O3' DC 1 3 1.00 1 O 13.68 19.314 17.431 14.623 A C2' DC 3 ATOM A C2' DC 1 3 1.00 1 C 13.22 18.375 17.202 15.725 A C1' DC 3 ATOM A C1' DC 1 3 1.00 1 C 12.39 16.962 17.101 15.323 A N1 DC 3 ATOM A N1 DC 1 3 1.00 1 N 11.83 16.503 15.791 15.203 A C2 DC 3 ATOM A C2 DC 1 3 1.00 1 C 12.10 17.294 14.843 15.333 A O2 DC 3 ATOM A O2 DC 1 3 1.00 1 O 11.53 15.198 15.626 14.915 A N3 DC 3 ATOM A N3 DC 1 3 1.00 1 N 11.42 14.324 16.654 14.790 A C4 DC 3 ATOM A C4 DC 1 3 1.00 1 C 11.20 13.049 16.405 14.534 A N4 DC 3 ATOM A N4 DC 1 3 1.00 1 N 11.67 14.813 17.990 14.915 A C5 DC 3 ATOM A C5 DC 1 3 1.00 1 C 11.94 16.106 18.146 15.203 A C6 DC 3 ATOM A C6 DC 1 3 1.00 1 C 16.37 22.243 18.049 13.500 A P G49 4 HETATM A P G49 1 4 1.00 1 P 18.21 23.671 17.878 14.017 A O1P G49 4 HETATM A O1P G49 1 4 1.00 1 O 17.12 21.709 18.954 12.549 A O2P G49 4 HETATM A O2P G49 1 4 1.00 1 O 13.39 21.787 16.523 13.129 A O5' G49 4 HETATM A O5' G49 1 4 1.00 1 O 12.63 22.352 15.416 13.818 A C5' G49 4 HETATM A C5' G49 1 4 1.00 1 C 12.34 21.891 14.150 13.134 A C4' G49 4 HETATM A C4' G49 1 4 1.00 1 C 11.97 20.491 14.014 13.108 A O4' G49 4 HETATM A O4' G49 1 4 1.00 1 O 12.34 22.341 14.078 11.661 A C3' G49 4 HETATM A C3' G49 1 4 1.00 1 C 13.36 22.715 12.717 11.363 A O3' G49 4 HETATM A O3' G49 1 4 1.00 1 O 12.03 21.131 14.603 10.919 A C2' G49 4 HETATM A C2' G49 1 4 1.00 1 C 11.20 20.032 13.966 11.713 A C1' G49 4 HETATM A C1' G49 1 4 1.00 1 C 10.61 18.761 14.693 11.655 A N9 G49 4 HETATM A N9 G49 1 4 1.00 1 N 10.25 18.549 16.034 11.702 A C8 G49 4 HETATM A C8 G49 1 4 1.00 1 C 10.29 17.294 16.366 11.676 A N7 G49 4 HETATM A N7 G49 1 4 1.00 1 N 9.93 16.632 15.137 11.593 A C5 G49 4 HETATM A C5 G49 1 4 1.00 1 C 9.83 15.246 14.852 11.504 A C6 G49 4 HETATM A C6 G49 1 4 1.00 1 C 9.78 14.315 15.651 11.488 A O6 G49 4 HETATM A O6 G49 1 4 1.00 1 O 9.75 14.986 13.516 11.415 A N1 G49 4 HETATM A N1 G49 1 4 1.00 1 N 9.46 15.961 12.577 11.384 A C2 G49 4 HETATM A C2 G49 1 4 1.00 1 C 9.84 15.548 11.300 11.316 A N2 G49 4 HETATM A N2 G49 1 4 1.00 1 N 9.99 16.674 10.386 11.279 A CM2 G49 4 HETATM A CM2 G49 1 4 1.00 1 C 9.81 17.288 12.776 11.441 A N3 G49 4 HETATM A N3 G49 1 4 1.00 1 N 9.88 17.520 14.109 11.551 A C4 G49 4 HETATM A C4 G49 1 4 1.00 1 C 17.12 23.542 12.432 9.984 A P DC 5 ATOM A P DC 1 5 1.00 1 P 18.18 24.185 11.110 10.213 A OP1 DC 5 ATOM A OP1 DC 1 5 1.00 1 O 15.89 24.149 13.661 9.566 A OP2 DC 5 ATOM A OP2 DC 1 5 1.00 1 O 13.08 22.240 12.239 8.934 A O5' DC 5 ATOM A O5' DC 1 5 1.00 1 O 12.09 21.513 11.001 9.106 A C5' DC 5 ATOM A C5' DC 1 5 1.00 1 C 11.88 20.385 11.040 8.092 A C4' DC 5 ATOM A C4' DC 1 5 1.00 1 C 11.42 19.353 11.879 8.631 A O4' DC 5 ATOM A O4' DC 1 5 1.00 1 O 11.66 20.745 11.602 6.718 A C3' DC 5 ATOM A C3' DC 1 5 1.00 1 C 12.30 20.130 10.884 5.637 A O3' DC 5 ATOM A O3' DC 1 5 1.00 1 O 11.24 20.253 13.047 6.818 A C2' DC 5 ATOM A C2' DC 1 5 1.00 1 C 10.58 18.957 12.742 7.607 A C1' DC 5 ATOM A C1' DC 1 5 1.00 1 C 9.66 18.286 13.977 7.972 A N1 DC 5 ATOM A N1 DC 1 5 1.00 1 N 8.97 16.911 13.843 8.176 A C2 DC 5 ATOM A C2 DC 1 5 1.00 1 C 8.91 16.397 12.725 8.186 A O2 DC 5 ATOM A O2 DC 1 5 1.00 1 O 8.89 16.196 14.964 8.338 A N3 DC 5 ATOM A N3 DC 1 5 1.00 1 N 8.90 16.780 16.213 8.375 A C4 DC 5 ATOM A C4 DC 1 5 1.00 1 C 8.94 15.984 17.291 8.542 A N4 DC 5 ATOM A N4 DC 1 5 1.00 1 N 9.09 18.166 16.344 8.166 A C5 DC 5 ATOM A C5 DC 1 5 1.00 1 C 9.35 18.876 15.207 7.962 A C6 DC 5 ATOM A C6 DC 1 5 1.00 1 C 14.47 20.929 9.677 4.906 A P DG 6 ATOM A P DG 1 6 1.00 1 P 15.13 21.589 8.651 5.762 A OP1 DG 6 ATOM A OP1 DG 1 6 1.00 1 O 16.46 21.868 10.448 4.075 A OP2 DG 6 ATOM A OP2 DG 1 6 1.00 1 O 10.44 19.770 8.925 4.112 A O5' DG 6 ATOM A O5' DG 1 6 1.00 1 O 9.30 18.803 8.039 4.665 A C5' DG 6 ATOM A C5' DG 1 6 1.00 1 C 9.16 17.856 7.584 3.594 A C4' DG 6 ATOM A C4' DG 1 6 1.00 1 C 8.92 16.987 8.620 3.150 A O4' DG 6 ATOM A O4' DG 1 6 1.00 1 O 8.95 18.554 7.070 2.314 A C3' DG 6 ATOM A C3' DG 1 6 1.00 1 C 9.32 17.814 5.985 1.802 A O3' DG 6 ATOM A O3' DG 1 6 1.00 1 O 8.59 18.591 8.313 1.452 A C2' DG 6 ATOM A C2' DG 1 6 1.00 1 C 8.09 17.255 8.936 1.776 A C1' DG 6 ATOM A C1' DG 1 6 1.00 1 C 7.54 17.347 10.389 1.729 A N9 DG 6 ATOM A N9 DG 1 6 1.00 1 N 7.18 18.431 11.205 1.776 A C8 DG 6 ATOM A C8 DG 1 6 1.00 1 C 7.53 18.127 12.460 1.745 A N7 DG 6 ATOM A N7 DG 1 6 1.00 1 N 7.03 16.735 12.488 1.661 A C5 DG 6 ATOM A C5 DG 1 6 1.00 1 C 6.71 15.793 13.552 1.609 A C6 DG 6 ATOM A C6 DG 1 6 1.00 1 C 7.24 16.090 14.740 1.599 A O6 DG 6 ATOM A O6 DG 1 6 1.00 1 O 6.95 14.480 13.189 1.546 A N1 DG 6 ATOM A N1 DG 1 6 1.00 1 N 6.67 14.100 11.870 1.567 A C2 DG 6 ATOM A C2 DG 1 6 1.00 1 C 6.99 12.795 11.638 1.499 A N2 DG 6 ATOM A N2 DG 1 6 1.00 1 N 6.91 14.941 10.836 1.609 A N3 DG 6 ATOM A N3 DG 1 6 1.00 1 N 7.06 16.229 11.216 1.677 A C4 DG 6 ATOM A C4 DG 1 6 1.00 1 C 9.43 15.263 18.283 5.005 A C1 DM1 7 HETATM B C1 DM1 2 1.00 1 C 9.78 16.419 19.018 5.052 A C2 DM1 7 HETATM B C2 DM1 2 1.00 1 C 10.12 17.747 18.367 5.057 A C3 DM1 7 HETATM B C3 DM1 2 1.00 1 C 9.62 17.786 16.911 5.015 A C4 DM1 7 HETATM B C4 DM1 2 1.00 1 C 10.17 18.870 16.174 4.979 A O4 DM1 7 HETATM B O4 DM1 2 1.00 1 O 9.33 16.512 16.263 4.979 A C5 DM1 7 HETATM B C5 DM1 2 1.00 1 C 8.69 16.537 14.768 4.916 A C6 DM1 7 HETATM B C6 DM1 2 1.00 1 C 9.32 17.532 14.039 4.895 A O6 DM1 7 HETATM B O6 DM1 2 1.00 1 O 8.47 15.243 14.069 4.911 A C7 DM1 7 HETATM B C7 DM1 2 1.00 1 C 8.31 15.260 12.681 4.885 A C8 DM1 7 HETATM B C8 DM1 2 1.00 1 C 8.57 16.350 11.921 4.906 A O8 DM1 7 HETATM B O8 DM1 2 1.00 1 O 8.52 14.022 12.016 4.827 A C9 DM1 7 HETATM B C9 DM1 2 1.00 1 C 9.15 14.067 10.442 4.869 A C10 DM1 7 HETATM B C10 DM1 2 1.00 1 C 9.85 14.681 10.230 6.217 A O10 DM1 7 HETATM B O10 DM1 2 1.00 1 O 9.39 12.731 9.822 4.744 A C11 DM1 7 HETATM B C11 DM1 2 1.00 1 C 9.58 11.560 10.565 5.303 A C12 DM1 7 HETATM B C12 DM1 2 1.00 1 C 9.84 11.644 10.655 6.776 A O12 DM1 7 HETATM B O12 DM1 2 1.00 1 O 9.92 10.247 9.864 5.068 A C13 DM1 7 HETATM B C13 DM1 2 1.00 1 C 11.07 9.649 10.141 4.023 A O13 DM1 7 HETATM B O13 DM1 2 1.00 1 O 10.53 9.598 8.858 6.045 A C14 DM1 7 HETATM B C14 DM1 2 1.00 1 C 9.05 11.462 12.044 4.796 A C15 DM1 7 HETATM B C15 DM1 2 1.00 1 C 8.51 12.778 12.650 4.832 A C16 DM1 7 HETATM B C16 DM1 2 1.00 1 C 8.16 12.812 14.067 4.848 A C17 DM1 7 HETATM B C17 DM1 2 1.00 1 C 8.52 11.636 14.782 4.812 A O17 DM1 7 HETATM B O17 DM1 2 1.00 1 O 8.40 13.960 14.838 4.895 A C18 DM1 7 HETATM B C18 DM1 2 1.00 1 C 8.59 13.994 16.288 4.921 A C19 DM1 7 HETATM B C19 DM1 2 1.00 1 C 9.07 12.994 17.006 4.911 A O19 DM1 7 HETATM B O19 DM1 2 1.00 1 O 8.93 15.304 16.900 4.953 A C20 DM1 7 HETATM B C20 DM1 2 1.00 1 C 10.64 20.214 16.819 5.141 A C21 DM1 7 HETATM B C21 DM1 2 1.00 1 C 10.20 15.654 9.249 6.405 A C1' DM1 7 HETATM B C1' DM1 2 1.00 1 C 10.21 16.674 9.615 7.450 A C2' DM1 7 HETATM B C2' DM1 2 1.00 1 C 10.49 15.981 9.777 8.813 A C3' DM1 7 HETATM B C3' DM1 2 1.00 1 C 10.43 17.093 10.034 9.848 A N3' DM1 7 HETATM B N3' DM1 2 1.00 1 N 10.65 15.196 8.489 9.132 A C4' DM1 7 HETATM B C4' DM1 2 1.00 1 C 11.32 16.176 7.399 9.284 A O4' DM1 7 HETATM B O4' DM1 2 1.00 1 O 10.59 14.139 8.257 8.066 A C5' DM1 7 HETATM B C5' DM1 2 1.00 1 C 10.38 14.922 7.995 6.765 A O5' DM1 7 HETATM B O5' DM1 2 1.00 1 O 10.62 13.301 6.975 8.166 A C6' DM1 7 HETATM B C6' DM1 2 1.00 1 C 23.36 19.784 14.421 2.643 A MG MG 8 HETATM C MG MG 3 1.00 1 MG 28.11 18.146 16.459 1.285 A O HOH 9 HETATM D O HOH 4 1.00 1 O 30.61 22.047 13.298 3.814 A O HOH 10 HETATM D O HOH 4 1.00 1 O 31.42 21.293 15.782 0.899 A O HOH 11 HETATM D O HOH 4 1.00 1 O 27.60 16.355 19.309 11.843 A O HOH 12 HETATM D O HOH 4 1.00 1 O 33.85 11.091 18.076 11.222 A O HOH 13 HETATM D O HOH 4 1.00 1 O 36.88 22.631 15.251 7.617 A O HOH 14 HETATM D O HOH 4 1.00 1 O 25.29 9.967 5.209 7.194 A O HOH 15 HETATM D O HOH 4 1.00 1 O 33.24 8.975 12.038 1.656 A O HOH 16 HETATM D O HOH 4 1.00 1 O 37.78 11.588 9.397 1.113 A O HOH 17 HETATM D O HOH 4 1.00 1 O 33.91 13.891 7.967 1.212 A O HOH 18 HETATM D O HOH 4 1.00 1 O 25.48 17.241 19.817 9.022 A O HOH 19 HETATM D O HOH 4 1.00 1 O 35.54 14.011 19.401 1.546 A O HOH 20 HETATM D O HOH 4 1.00 1 O 47.77 20.270 19.474 8.375 A O HOH 21 HETATM D O HOH 4 1.00 1 O 47.18 24.042 14.497 5.256 A O HOH 22 HETATM D O HOH 4 1.00 1 O 32.88 21.625 10.060 1.437 A O HOH 23 HETATM D O HOH 4 1.00 1 O 40.17 22.223 17.730 8.719 A O HOH 24 HETATM D O HOH 4 1.00 1 O 21.09 13.647 18.507 11.467 A O HOH 25 HETATM D O HOH 4 1.00 1 O 25.88 6.055 16.774 7.272 A O HOH 26 HETATM D O HOH 4 1.00 1 O 33.48 10.982 3.800 9.257 A O HOH 27 HETATM D O HOH 4 1.00 1 O 50.44 6.877 18.498 10.161 A O HOH 28 HETATM D O HOH 4 1.00 1 O 17.51 19.085 8.453 10.292 A O HOH 29 HETATM D O HOH 4 1.00 1 O 45.47 13.974 21.416 3.025 A O HOH 30 HETATM D O HOH 4 1.00 1 O 31.67 21.100 7.430 8.009 A O HOH 31 HETATM D O HOH 4 1.00 1 O 41.78 19.957 9.892 12.329 A O HOH 32 HETATM D O HOH 4 1.00 1 O 46.81 19.289 21.287 12.162 A O HOH 33 HETATM D O HOH 4 1.00 1 O 39.07 15.626 4.585 10.428 A O HOH 34 HETATM D O HOH 4 1.00 1 O 54.07 9.791 18.758 6.013 A O HOH 35 HETATM D O HOH 4 1.00 1 O 39.81 16.992 6.282 11.964 A O HOH 36 HETATM D O HOH 4 1.00 1 O 49.45 10.330 3.513 2.001 A O HOH 37 HETATM D O HOH 4 1.00 1 O 39.61 9.786 20.731 2.194 A O HOH 38 HETATM D O HOH 4 1.00 1 O 50.14 9.436 20.287 11.666 A O HOH 39 HETATM D O HOH 4 1.00 1 O 41.35 9.364 16.299 12.005 A O HOH 40 HETATM D O HOH 4 1.00 1 O 43.50 24.329 8.701 9.143 A O HOH 41 HETATM D O HOH 4 1.00 1 O 47.04 6.108 11.935 1.134 A O HOH 42 HETATM D O HOH 4 1.00 1 O 55.56 28.987 16.285 12.983 A O HOH 43 HETATM D O HOH 4 1.00 1 O 51.94 26.305 9.928 12.220 A O HOH 44 HETATM D O HOH 4 1.00 1 O 43.35 26.739 13.516 11.561 A O HOH 45 HETATM D O HOH 4 1.00 1 O 50.83 14.170 2.817 6.786 A O HOH 46 HETATM D O HOH 4 1.00 1 O 41.68 24.741 9.439 6.159 A O HOH 47 HETATM D O HOH 4 1.00 1 O 47.27 13.438 21.804 10.668 A O HOH 48 HETATM D O HOH 4 1.00 1 O 49.24 27.255 11.823 3.924 A O HOH 49 HETATM D O HOH 4 1.00 1 O 42.56 14.005 24.263 5.224 A O HOH 50 HETATM D O HOH 4 1.00 1 O 53.13 28.580 13.611 14.476 A O HOH 51 HETATM D O HOH 4 1.00 1 O 47.28 26.079 16.506 9.654 A O HOH 52 HETATM D O HOH 4 1.00 1 O 43.37 10.208 19.513 8.641 A O HOH 53 HETATM D O HOH 4 1.00 1 O 45.72 24.646 17.146 3.809 A O HOH 54 HETATM D O HOH 4 1.00 1 O 46.27 24.030 6.080 10.961 A O HOH 55 HETATM D O HOH 4 1.00 1 O 50.94 3.230 19.572 12.654 A O HOH 56 HETATM D O HOH 4 1.00 1 O 50.38 25.823 16.009 14.085 A O HOH 57 HETATM D O HOH 4 1.00 1 O 40.25 12.806 19.882 8.803 A O HOH 58 HETATM D O HOH 4 1.00 1 O 47.68 12.024 23.084 8.395 A O HOH 59 HETATM D O HOH 4 1.00 1 O 43.05 18.795 6.365 8.197 A O HOH 60 HETATM D O HOH 4 1.00 1 O 44.29 16.950 5.510 6.478 A O HOH 61 HETATM D O HOH 4 1.00 1 O 48.55 23.989 13.846 1.400 A O HOH 62 HETATM D O HOH 4 1.00 1 O 36.83 19.546 21.977 19.983 A O HOH 63 HETATM D O HOH 4 1.00 1 O 41.10 7.212 19.577 6.421 A O HOH 64 HETATM D O HOH 4 1.00 1 O 48.26 11.337 24.143 6.118 A O HOH 65 HETATM D O HOH 4 1.00 1 O 45.14 21.997 18.348 1.729 A O HOH 66 HETATM D O HOH 4 1.00 1 O 44.12 21.855 11.770 0.507 A O HOH 67 HETATM D O HOH 4 1.00 1 O 44.36 14.128 21.105 14.043 A O HOH 68 HETATM D O HOH 4 1.00 1 O 42.46 25.433 10.898 1.980 A O HOH 69 HETATM D O HOH 4 1.00 1 O 41.18 11.535 20.326 4.744 A O HOH 70 HETATM D O HOH 4 1.00 1 O 52.77 13.354 6.692 4.671 A O HOH 71 HETATM D O HOH 4 1.00 1 O 52.73 12.281 5.714 4.775 A O HOH 72 HETATM D O HOH 4 1.00 1 O 52.72 14.598 6.326 4.017 A O HOH 73 HETATM D O HOH 4 1.00 1 O 0.035787 0.000000 0.000000 0.000000 0.035787 0.000000 0.000000 0.000000 0.019141 0.00000 0.00000 0.00000 Wang, A.H.-J. Gao, Y.-G. Liaw, Y.-C. Li, Y.-K. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 8 90.00 90.00 90.00 27.943 27.943 52.243 C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C27 H29 N O10 527.520 DAUNOMYCIN DAUNORUBICIN non-polymer C11 H16 N5 O7 P 361.248 n N2-METHYL-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer Mg 2 24.305 MAGNESIUM ION non-polymer N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 N C N 12 R C N 13 N N N 14 N C N 15 N O N 16 N N N 17 N C N 18 N N N 19 N C N 20 N C N 21 N H N 22 N H N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N O N 36 N P N 37 N O N 38 N O N 39 N O N 40 N C N 41 R C N 42 N O N 43 S C N 44 N O N 45 N C N 46 R C Y 47 N N Y 48 N C Y 49 N N Y 50 N C N 51 N C N 52 N O N 53 N N N 54 N C N 55 N N N 56 N N Y 57 N C N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H Y 72 N C Y 73 N C Y 74 N C Y 75 N C N 76 N O Y 77 N C N 78 N C N 79 N O Y 80 N C Y 81 N C N 82 N O Y 83 N C N 84 S C N 85 N O N 86 N C N 87 S C N 88 N O N 89 N C N 90 N O N 91 N C N 92 N C Y 93 N C Y 94 N C N 95 N O Y 96 N C N 97 N C N 98 N O Y 99 N C N 100 N C N 101 R C N 102 N C N 103 S C N 104 N N N 105 S C N 106 N O N 107 S C N 108 N O N 109 N C N 110 N H N 111 N H N 112 N H N 113 N H N 114 N H N 115 N H N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N H N 124 N H N 125 N H N 126 N H N 127 N H N 128 N H N 129 N H N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N P N 140 N O N 141 N O N 142 N O N 143 N O N 144 N C N 145 R C N 146 N O N 147 S C N 148 N O N 149 N C N 150 R C Y 151 N N Y 152 N C Y 153 N N Y 154 N C N 155 N C N 156 N O N 157 N N N 158 N C N 159 N N N 160 N C N 161 N N Y 162 N C N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N O N 180 N H N 181 N H N 182 N MG N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N doub N 27 N sing N 28 N doub N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N doub N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing Y 59 N sing Y 60 N sing Y 61 N doub N 62 N sing Y 63 N sing N 64 N sing Y 65 N doub N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing Y 75 N doub Y 76 N sing N 77 N sing Y 78 N sing N 79 N sing Y 80 N doub N 81 N sing N 82 N sing Y 83 N sing N 84 N sing N 85 N sing Y 86 N doub N 87 N doub N 88 N sing Y 89 N doub Y 90 N sing N 91 N sing Y 92 N sing N 93 N sing N 94 N sing Y 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N doub N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing Y 115 N sing N 116 N sing Y 117 N doub N 118 N sing N 119 N sing N 120 N doub N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N doub N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing Y 169 N sing Y 170 N sing Y 171 N doub N 172 N sing Y 173 N sing N 174 N sing Y 175 N doub N 176 N doub N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N doub N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing US Biochemistry BICHAW 0033 0006-2960 30 3812 3815 10.1021/bi00230a002 2018756 Formaldehyde cross-links daunorubicin and DNA efficiently: HPLC and X-ray diffraction studies. 1991 10.2210/pdb1d33/pdb pdb_00001d33 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 298.00 1 DIFFRACTOMETER RIGAKU AFC-5R x-ray 1 1.5418 1.0 1.5418 ROTATING ANODE RIGAKU 1824.232 5'-D(*CP*GP*CP*(G49)P*CP*G)-3' 1 syn polymer 527.520 DAUNOMYCIN 1 syn non-polymer 24.305 MAGNESIUM ION 1 syn non-polymer 18.015 water 65 nat water no yes (DC)(DG)(DC)(G49)(DC)(DG) CGCGCG A polydeoxyribonucleotide n n n n n n 2.80 55.99 VAPOR DIFFUSION 6.00 pH 6.00, VAPOR DIFFUSION ROOM TEMPERATURE WATER 1 MPD 1 HCHO 1 BACL2 1 NA CACODYLATE 1 SPERMINE 1 WATER 2 HCHO 2 MPD 2 6.442 1 19 A 1 A 6 -2.380 A_DC1:DG6_A 1 1.246 0.228 -0.023 -0.166 -15.149 1 19 A 2 A 5 0.770 A_DG2:DC5_A 2 0.972 -0.082 -0.365 -0.187 -3.218 1 19 A 3 A 4 2.077 A_DC3:G494_A 3 -7.137 0.262 0.109 -0.254 3.218 1 19 A 4 A 3 2.077 A_G494:DC3_A 4 -7.137 -0.262 0.109 -0.254 15.149 1 19 A 5 A 2 0.770 A_DC5:DG2_A 5 0.972 0.082 -0.365 -0.187 -6.442 1 19 A 6 A 1 -2.380 A_DG6:DC1_A 6 1.246 -0.228 -0.023 -0.166 6.937 34.269 A A 1 2 -4.210 A A 6 5 6.982 -2.478 1.234 1.127 AA_DC1DG2:DC5DG6_AA 1 1.725 -2.931 34.140 2.742 -1.516 3.140 30.742 A A 2 3 -6.549 A A 5 4 3.040 -3.456 -1.169 0.026 AA_DG2DC3:G494DC5_AA 2 -3.898 7.387 30.308 0.693 1.479 3.116 36.970 A A 3 4 12.274 A A 4 3 3.189 7.730 0.000 -0.037 AA_DC3G494:DC3G494_AA 3 0.000 0.000 36.180 -1.073 0.000 3.140 30.742 A A 4 5 -6.549 A A 3 2 3.040 -3.456 1.169 0.026 AA_G494DC5:DG2DC3_AA 4 3.898 -7.387 30.308 0.693 -1.479 6.937 34.269 A A 5 6 -4.210 A A 2 1 6.982 -2.478 -1.234 1.127 AA_DC5DG6:DC1DG2_AA 5 -1.725 2.931 34.140 2.742 1.516 chem_comp_atom chem_comp_bond database_2 struct_conn struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 1992-04-15 1 1 2008-05-22 1 2 2011-07-13 1 3 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession _struct_conn.pdbx_dist_value _struct_conn.pdbx_leaving_atom_flag _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id BNL Y NDB 1991-02-27 REL DM1 DAUNOMYCIN MG MAGNESIUM ION HOH water A METHYLENE GROUP LINKS THE N3* ATOM OF DAUNOMYCIN AND N2 G A 4. DM1 4 2 DM1 DM1 7 A MG 8 3 MG MG 8 A HOH 9 4 HOH HOH 9 A HOH 10 4 HOH HOH 10 A HOH 11 4 HOH HOH 11 A HOH 12 4 HOH HOH 12 A HOH 13 4 HOH HOH 13 A HOH 14 4 HOH HOH 14 A HOH 15 4 HOH HOH 15 A HOH 16 4 HOH HOH 16 A HOH 17 4 HOH HOH 17 A HOH 18 4 HOH HOH 18 A HOH 19 4 HOH HOH 19 A HOH 20 4 HOH HOH 20 A HOH 21 4 HOH HOH 21 A HOH 22 4 HOH HOH 22 A HOH 23 4 HOH HOH 23 A HOH 24 4 HOH HOH 24 A HOH 25 4 HOH HOH 25 A HOH 26 4 HOH HOH 26 A HOH 27 4 HOH HOH 27 A HOH 28 4 HOH HOH 28 A HOH 29 4 HOH HOH 29 A HOH 30 4 HOH HOH 30 A HOH 31 4 HOH HOH 31 A HOH 32 4 HOH HOH 32 A HOH 33 4 HOH HOH 33 A HOH 34 4 HOH HOH 34 A HOH 35 4 HOH HOH 35 A HOH 36 4 HOH HOH 36 A HOH 37 4 HOH HOH 37 A HOH 38 4 HOH HOH 38 A HOH 39 4 HOH HOH 39 A HOH 40 4 HOH HOH 40 A HOH 41 4 HOH HOH 41 A HOH 42 4 HOH HOH 42 A HOH 43 4 HOH HOH 43 A HOH 44 4 HOH HOH 44 A HOH 45 4 HOH HOH 45 A HOH 46 4 HOH HOH 46 A HOH 47 4 HOH HOH 47 A HOH 48 4 HOH HOH 48 A HOH 49 4 HOH HOH 49 A HOH 50 4 HOH HOH 50 A HOH 51 4 HOH HOH 51 A HOH 52 4 HOH HOH 52 A HOH 53 4 HOH HOH 53 A HOH 54 4 HOH HOH 54 A HOH 55 4 HOH HOH 55 A HOH 56 4 HOH HOH 56 A HOH 57 4 HOH HOH 57 A HOH 58 4 HOH HOH 58 A HOH 59 4 HOH HOH 59 A HOH 60 4 HOH HOH 60 A HOH 61 4 HOH HOH 61 A HOH 62 4 HOH HOH 62 A HOH 63 4 HOH HOH 63 A HOH 64 4 HOH HOH 64 A HOH 65 4 HOH HOH 65 A HOH 66 4 HOH HOH 66 A HOH 67 4 HOH HOH 67 A HOH 68 4 HOH HOH 68 A HOH 69 4 HOH HOH 69 A HOH 70 4 HOH HOH 70 A HOH 71 4 HOH HOH 71 A HOH 72 4 HOH HOH 72 A HOH 73 4 HOH HOH 73 A C 1 n 1 DC 1 A G 2 n 2 DG 2 A C 3 n 3 DC 3 A +G 4 n 4 G49 4 A C 5 n 5 DC 5 A G 6 n 6 DG 6 A author_and_software_defined_assembly PISA 2 dimeric 4290 -1.1 1690 A G49 4 A G49 4 DG 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 8_665 -y+1,-x+1,-z+1/2 crystal symmetry operation 27.9430000000 27.9430000000 26.1215000000 1 A A O O HOH HOH 71 73 1.45 1 A A O O HOH HOH 71 72 1.46 1 A A O O HOH HOH 23 67 1.96 1 11.29 1.20 119.70 130.99 A A A C3' O3' P DC DC DG 1 1 2 Y 1 -5.68 0.80 102.40 96.72 A A A C3' C2' C1' DG DG DG 2 2 2 N 1 6.52 0.30 108.30 114.82 A A A O4' C1' N9 DG DG DG 2 2 2 N 1 12.30 1.20 119.70 132.00 A A A C3' O3' P DG DG DC 2 2 3 Y 1 3.59 0.50 119.90 123.49 A A A C2 N3 C4 DC DC DC 3 3 3 N 1 -3.17 0.40 121.90 118.73 A A A N3 C4 C5 DC DC DC 3 3 3 N 1 -5.71 0.80 102.40 96.69 A A A C3' C2' C1' DC DC DC 5 5 5 N 1 9.88 0.30 108.30 118.18 A A A O4' C1' N1 DC DC DC 5 5 5 N 1 7.65 1.10 110.50 118.15 A A A O3' P OP1 DC DG DG 5 6 6 Y 1 -3.66 0.60 125.10 121.44 A A A C6 N1 C2 DG DG DG 6 6 6 N 1 4.62 0.50 111.50 116.12 A A A C5 C6 N1 DG DG DG 6 6 6 N 1 -4.16 0.60 128.60 124.44 A A A C5 C6 O6 DG DG DG 6 6 6 N 1 A A P O5' DC DC 5 5 0.091 0.010 1.593 1.684 N 1 A A N3 C4 DC DC 5 5 0.044 0.007 1.335 1.379 N 1 A A O O HOH HOH 42 56 2.01 1_555 4_454 0.185 1.500 2229 1 3.000 TR isotropic TR isotropic 1.500 65 225 40 120 0 0.016 fix fix 1.500 1D33 3.000 1 refinement NUCLSQ Formaldehyde cross-links daunorubicin and DNA efficiently: HPLC and X-RAY diffraction studies 1 N N 2 N N 3 N N 4 N N covale 1.611 both A DC 3 A O3' DC 3 1_555 A G49 4 A P G49 4 1_555 covale 1.633 one A G49 4 A O3' G49 4 1_555 A DC 5 A P DC 5 1_555 covale 1.532 none A G49 4 A CM2 G49 4 1_555 A DM1 7 B N3' DM1 1_555 hydrog WATSON-CRICK A DC 1 A N3 DC 1 1_555 A DG 6 A N1 DG 6 8_665 hydrog WATSON-CRICK A DC 1 A N4 DC 1 1_555 A DG 6 A O6 DG 6 8_665 hydrog WATSON-CRICK A DC 1 A O2 DC 1 1_555 A DG 6 A N2 DG 6 8_665 hydrog WATSON-CRICK A DG 2 A N1 DG 2 1_555 A DC 5 A N3 DC 5 8_665 hydrog WATSON-CRICK A DG 2 A N2 DG 2 1_555 A DC 5 A O2 DC 5 8_665 hydrog WATSON-CRICK A DG 2 A O6 DG 2 1_555 A DC 5 A N4 DC 5 8_665 hydrog WATSON-CRICK A DC 3 A N3 DC 3 1_555 A G49 4 A N1 G49 4 8_665 hydrog WATSON-CRICK A DC 3 A N4 DC 3 1_555 A G49 4 A O6 G49 4 8_665 hydrog WATSON-CRICK A DC 3 A O2 DC 3 1_555 A G49 4 A N2 G49 4 8_665 hydrog WATSON-CRICK A G49 4 A N1 G49 4 1_555 A DC 3 A N3 DC 3 8_665 hydrog WATSON-CRICK A G49 4 A N2 G49 4 1_555 A DC 3 A O2 DC 3 8_665 hydrog WATSON-CRICK A G49 4 A O6 G49 4 1_555 A DC 3 A N4 DC 3 8_665 hydrog WATSON-CRICK A DC 5 A N3 DC 5 1_555 A DG 2 A N1 DG 2 8_665 hydrog WATSON-CRICK A DC 5 A N4 DC 5 1_555 A DG 2 A O6 DG 2 8_665 hydrog WATSON-CRICK A DC 5 A O2 DC 5 1_555 A DG 2 A N2 DG 2 8_665 hydrog WATSON-CRICK A DG 6 A N1 DG 6 1_555 A DC 1 A N3 DC 1 8_665 hydrog WATSON-CRICK A DG 6 A N2 DG 6 1_555 A DC 1 A O2 DC 1 8_665 hydrog WATSON-CRICK A DG 6 A O6 DG 6 1_555 A DC 1 A N4 DC 1 8_665 DNA RIGHT HANDED DNA, DOUBLE HELIX, COMPLEXED WITH DRUG, MODIFIED, DNA 1D33 PDB 1 1D33 1 6 1D33 1 6 1D33 A 1 1 6 BINDING SITE FOR RESIDUE DM1 A 7 A DM1 7 Software 12 BINDING SITE FOR RESIDUE MG A 8 A MG 8 Software 5 A DC 1 A DC 1 12 8_665 A DG 2 A DG 2 12 8_665 A DC 3 A DC 3 12 8_665 A G49 4 A G49 4 12 1_555 A DC 5 A DC 5 12 1_555 A DG 6 A DG 6 12 1_555 A MG 8 C MG 12 1_555 A HOH 29 D HOH 12 1_555 A HOH 34 D HOH 12 1_555 A HOH 36 D HOH 12 1_555 A HOH 60 D HOH 12 1_555 A HOH 71 D HOH 12 1_555 A DG 6 A DG 6 5 1_555 A DM1 7 B DM1 5 1_555 A HOH 9 D HOH 5 1_555 A HOH 10 D HOH 5 1_555 A HOH 11 D HOH 5 1_555 92 tetragonal P 41 21 2