0.007567
0.000000
0.003127
0.000000
0.010953
0.000000
0.000000
0.000000
0.018069
0.00000
0.00000
0.00000
Birck, C.
Mourey, L.
Gouet, P.
Fabry, B.
Schumacher, J.
Rousseau, P.
Kahn, D.
Samama, J.P.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
112.45
90.00
132.150
91.300
59.880
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C4 H8 N O7 P
213.083
n
ASPARTYL PHOSPHATE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
O4 S -2
96.063
SULFATE ION
non-polymer
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
Structure Fold.Des.
FODEFH
1263
0969-2126
7
1505
1515
10.1016/S0969-2126(00)88341-0
10647181
Conformational changes induced by phosphorylation of the FixJ receiver domain.
1999
10.2210/pdb1d5w/pdb
pdb_00001d5w
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100
1
100
1
CCD
1998-09-19
MARRESEARCH
CCD
1999-02-25
ADSC
SINGLE WAVELENGTH
M
x-ray
1
SINGLE WAVELENGTH
M
x-ray
1
0.932
1.0
0.946
1.0
ID14-3
ESRF
0.932
SYNCHROTRON
ESRF BEAMLINE ID14-3
ID14-4
ESRF
0.946
SYNCHROTRON
ESRF BEAMLINE ID14-4
13959.987
TRANSCRIPTIONAL REGULATORY PROTEIN FIXJ
FIXJ RECEIVER DOMAIN (RESIDUES 1-126)
T2Q, A125L
3
man
polymer
96.063
SULFATE ION
4
syn
non-polymer
18.015
water
WATER MOLECULES WITH RESIDUE NUMBER 1011 AND 1053 ARE MOST PROBABLY AMMONIUM IONS.
144
nat
water
PHOSPHORYLATED ON ASP-54. IN THIS ENTRY, THE RESIDUE NAME PAS STANDS FOR PHOSPHOASPARTATE
no
yes
MQDYTVHIVDDEEPVRKSLAFMLTMNGFAVKMHQSAEAFLAFAPDVRNGVLVT(PHD)LRMPDMSGVELLRNLGDLKINI
PSIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIERASEHLVALE
MQDYTVHIVDDEEPVRKSLAFMLTMNGFAVKMHQSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIV
ITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIERASEHLVALE
A,B,C
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Sinorhizobium
Escherichia
sample
382
Sinorhizobium meliloti
562
Escherichia coli
PLASMID
PT7-7
3
4.0
68.3
VAPOR DIFFUSION, HANGING DROP
7.5
AMMONIUM SULFATE, 2-METHYL-2,4-PENTANEDIOL, HEPES, TRITON X-100, EDTA, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
277
database_2
struct_conn
struct_ref_seq_dif
struct_site
repository
Initial release
Version format compliance
Version format compliance
Other
Database references
Derived calculations
1
0
2000-10-11
1
1
2008-04-27
1
2
2011-07-13
1
3
2012-08-22
1
4
2021-11-03
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_ref_seq_dif.details
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
1999-10-12
REL
REL
SO4
SULFATE ION
HOH
water
SO4
2003
2
SO4
SO4
2003
A
SO4
2002
2
SO4
SO4
2002
B
SO4
2001
2
SO4
SO4
2001
C
SO4
2004
2
SO4
SO4
2004
C
TIP
1002
3
HOH
HOH
1002
A
TIP
1007
3
HOH
HOH
1007
A
TIP
1008
3
HOH
HOH
1008
A
TIP
1012
3
HOH
HOH
1012
A
TIP
1013
3
HOH
HOH
1013
A
TIP
1014
3
HOH
HOH
1014
A
TIP
1018
3
HOH
HOH
1018
A
TIP
1022
3
HOH
HOH
1022
A
TIP
1024
3
HOH
HOH
1024
A
TIP
1032
3
HOH
HOH
1032
A
TIP
1035
3
HOH
HOH
1035
A
TIP
1037
3
HOH
HOH
1037
A
TIP
1038
3
HOH
HOH
1038
A
TIP
1041
3
HOH
HOH
1041
A
TIP
1043
3
HOH
HOH
1043
A
TIP
1049
3
HOH
HOH
1049
A
TIP
1051
3
HOH
HOH
1051
A
TIP
1052
3
HOH
HOH
1052
A
TIP
1053
3
HOH
HOH
1053
A
TIP
1064
3
HOH
HOH
1064
A
TIP
1065
3
HOH
HOH
1065
A
TIP
1068
3
HOH
HOH
1068
A
TIP
1069
3
HOH
HOH
1069
A
TIP
1071
3
HOH
HOH
1071
A
TIP
1073
3
HOH
HOH
1073
A
TIP
1074
3
HOH
HOH
1074
A
TIP
1077
3
HOH
HOH
1077
A
TIP
1081
3
HOH
HOH
1081
A
TIP
1089
3
HOH
HOH
1089
A
TIP
1091
3
HOH
HOH
1091
A
TIP
1096
3
HOH
HOH
1096
A
TIP
1100
3
HOH
HOH
1100
A
TIP
1109
3
HOH
HOH
1109
A
TIP
1114
3
HOH
HOH
1114
A
TIP
1116
3
HOH
HOH
1116
A
TIP
1117
3
HOH
HOH
1117
A
TIP
1120
3
HOH
HOH
1120
A
TIP
1122
3
HOH
HOH
1122
A
TIP
1125
3
HOH
HOH
1125
A
TIP
1127
3
HOH
HOH
1127
A
TIP
1128
3
HOH
HOH
1128
A
TIP
1129
3
HOH
HOH
1129
A
TIP
1131
3
HOH
HOH
1131
A
TIP
1132
3
HOH
HOH
1132
A
TIP
1135
3
HOH
HOH
1135
A
TIP
1139
3
HOH
HOH
1139
A
TIP
1140
3
HOH
HOH
1140
A
TIP
1141
3
HOH
HOH
1141
A
TIP
1001
3
HOH
HOH
1001
B
TIP
1003
3
HOH
HOH
1003
B
TIP
1004
3
HOH
HOH
1004
B
TIP
1006
3
HOH
HOH
1006
B
TIP
1010
3
HOH
HOH
1010
B
TIP
1011
3
HOH
HOH
1011
B
TIP
1017
3
HOH
HOH
1017
B
TIP
1019
3
HOH
HOH
1019
B
TIP
1020
3
HOH
HOH
1020
B
TIP
1021
3
HOH
HOH
1021
B
TIP
1026
3
HOH
HOH
1026
B
TIP
1027
3
HOH
HOH
1027
B
TIP
1028
3
HOH
HOH
1028
B
TIP
1029
3
HOH
HOH
1029
B
TIP
1030
3
HOH
HOH
1030
B
TIP
1033
3
HOH
HOH
1033
B
TIP
1034
3
HOH
HOH
1034
B
TIP
1036
3
HOH
HOH
1036
B
TIP
1039
3
HOH
HOH
1039
B
TIP
1042
3
HOH
HOH
1042
B
TIP
1044
3
HOH
HOH
1044
B
TIP
1047
3
HOH
HOH
1047
B
TIP
1054
3
HOH
HOH
1054
B
TIP
1055
3
HOH
HOH
1055
B
TIP
1057
3
HOH
HOH
1057
B
TIP
1060
3
HOH
HOH
1060
B
TIP
1061
3
HOH
HOH
1061
B
TIP
1062
3
HOH
HOH
1062
B
TIP
1067
3
HOH
HOH
1067
B
TIP
1072
3
HOH
HOH
1072
B
TIP
1075
3
HOH
HOH
1075
B
TIP
1079
3
HOH
HOH
1079
B
TIP
1087
3
HOH
HOH
1087
B
TIP
1094
3
HOH
HOH
1094
B
TIP
1097
3
HOH
HOH
1097
B
TIP
1098
3
HOH
HOH
1098
B
TIP
1101
3
HOH
HOH
1101
B
TIP
1103
3
HOH
HOH
1103
B
TIP
1105
3
HOH
HOH
1105
B
TIP
1106
3
HOH
HOH
1106
B
TIP
1107
3
HOH
HOH
1107
B
TIP
1108
3
HOH
HOH
1108
B
TIP
1111
3
HOH
HOH
1111
B
TIP
1118
3
HOH
HOH
1118
B
TIP
1119
3
HOH
HOH
1119
B
TIP
1123
3
HOH
HOH
1123
B
TIP
1133
3
HOH
HOH
1133
B
TIP
1137
3
HOH
HOH
1137
B
TIP
1138
3
HOH
HOH
1138
B
TIP
1142
3
HOH
HOH
1142
B
TIP
1143
3
HOH
HOH
1143
B
TIP
1144
3
HOH
HOH
1144
B
TIP
1005
3
HOH
HOH
1005
C
TIP
1009
3
HOH
HOH
1009
C
TIP
1015
3
HOH
HOH
1015
C
TIP
1016
3
HOH
HOH
1016
C
TIP
1023
3
HOH
HOH
1023
C
TIP
1025
3
HOH
HOH
1025
C
TIP
1031
3
HOH
HOH
1031
C
TIP
1040
3
HOH
HOH
1040
C
TIP
1045
3
HOH
HOH
1045
C
TIP
1046
3
HOH
HOH
1046
C
TIP
1048
3
HOH
HOH
1048
C
TIP
1050
3
HOH
HOH
1050
C
TIP
1056
3
HOH
HOH
1056
C
TIP
1058
3
HOH
HOH
1058
C
TIP
1059
3
HOH
HOH
1059
C
TIP
1063
3
HOH
HOH
1063
C
TIP
1066
3
HOH
HOH
1066
C
TIP
1070
3
HOH
HOH
1070
C
TIP
1076
3
HOH
HOH
1076
C
TIP
1078
3
HOH
HOH
1078
C
TIP
1080
3
HOH
HOH
1080
C
TIP
1082
3
HOH
HOH
1082
C
TIP
1083
3
HOH
HOH
1083
C
TIP
1084
3
HOH
HOH
1084
C
TIP
1085
3
HOH
HOH
1085
C
TIP
1086
3
HOH
HOH
1086
C
TIP
1088
3
HOH
HOH
1088
C
TIP
1090
3
HOH
HOH
1090
C
TIP
1092
3
HOH
HOH
1092
C
TIP
1093
3
HOH
HOH
1093
C
TIP
1095
3
HOH
HOH
1095
C
TIP
1099
3
HOH
HOH
1099
C
TIP
1102
3
HOH
HOH
1102
C
TIP
1104
3
HOH
HOH
1104
C
TIP
1110
3
HOH
HOH
1110
C
TIP
1112
3
HOH
HOH
1112
C
TIP
1113
3
HOH
HOH
1113
C
TIP
1115
3
HOH
HOH
1115
C
TIP
1121
3
HOH
HOH
1121
C
TIP
1124
3
HOH
HOH
1124
C
TIP
1126
3
HOH
HOH
1126
C
TIP
1130
3
HOH
HOH
1130
C
TIP
1134
3
HOH
HOH
1134
C
TIP
1136
3
HOH
HOH
1136
C
ALA
1
n
1
MET
1
A
GLN
2
n
2
GLN
2
A
ASP
3
n
3
ASP
3
A
TYR
4
n
4
TYR
4
A
THR
5
n
5
THR
5
A
VAL
6
n
6
VAL
6
A
HIS
7
n
7
HIS
7
A
ILE
8
n
8
ILE
8
A
VAL
9
n
9
VAL
9
A
ASP
10
n
10
ASP
10
A
ASP
11
n
11
ASP
11
A
GLU
12
n
12
GLU
12
A
GLU
13
n
13
GLU
13
A
PRO
14
n
14
PRO
14
A
VAL
15
n
15
VAL
15
A
ARG
16
n
16
ARG
16
A
LYS
17
n
17
LYS
17
A
SER
18
n
18
SER
18
A
LEU
19
n
19
LEU
19
A
ALA
20
n
20
ALA
20
A
PHE
21
n
21
PHE
21
A
MET
22
n
22
MET
22
A
LEU
23
n
23
LEU
23
A
THR
24
n
24
THR
24
A
MET
25
n
25
MET
25
A
ASN
26
n
26
ASN
26
A
GLY
27
n
27
GLY
27
A
PHE
28
n
28
PHE
28
A
ALA
29
n
29
ALA
29
A
VAL
30
n
30
VAL
30
A
LYS
31
n
31
LYS
31
A
MET
32
n
32
MET
32
A
HIS
33
n
33
HIS
33
A
GLN
34
n
34
GLN
34
A
SER
35
n
35
SER
35
A
ALA
36
n
36
ALA
36
A
GLU
37
n
37
GLU
37
A
ALA
38
n
38
ALA
38
A
PHE
39
n
39
PHE
39
A
LEU
40
n
40
LEU
40
A
ALA
41
n
41
ALA
41
A
PHE
42
n
42
PHE
42
A
ALA
43
n
43
ALA
43
A
PRO
44
n
44
PRO
44
A
ASP
45
n
45
ASP
45
A
VAL
46
n
46
VAL
46
A
ARG
47
n
47
ARG
47
A
ASN
48
n
48
ASN
48
A
GLY
49
n
49
GLY
49
A
VAL
50
n
50
VAL
50
A
LEU
51
n
51
LEU
51
A
VAL
52
n
52
VAL
52
A
THR
53
n
53
THR
53
A
APP
54
n
54
PHD
54
A
LEU
55
n
55
LEU
55
A
ARG
56
n
56
ARG
56
A
MET
57
n
57
MET
57
A
PRO
58
n
58
PRO
58
A
ASP
59
n
59
ASP
59
A
MET
60
n
60
MET
60
A
SER
61
n
61
SER
61
A
GLY
62
n
62
GLY
62
A
VAL
63
n
63
VAL
63
A
GLU
64
n
64
GLU
64
A
LEU
65
n
65
LEU
65
A
LEU
66
n
66
LEU
66
A
ARG
67
n
67
ARG
67
A
ASN
68
n
68
ASN
68
A
LEU
69
n
69
LEU
69
A
GLY
70
n
70
GLY
70
A
ASP
71
n
71
ASP
71
A
ALA
72
n
72
LEU
72
A
ALA
73
n
73
LYS
73
A
ILE
74
n
74
ILE
74
A
ALA
75
n
75
ASN
75
A
ILE
76
n
76
ILE
76
A
PRO
77
n
77
PRO
77
A
SER
78
n
78
SER
78
A
ILE
79
n
79
ILE
79
A
VAL
80
n
80
VAL
80
A
ILE
81
n
81
ILE
81
A
THR
82
n
82
THR
82
A
GLY
83
n
83
GLY
83
A
HIS
84
n
84
HIS
84
A
GLY
85
n
85
GLY
85
A
ASP
86
n
86
ASP
86
A
VAL
87
n
87
VAL
87
A
PRO
88
n
88
PRO
88
A
MET
89
n
89
MET
89
A
ALA
90
n
90
ALA
90
A
VAL
91
n
91
VAL
91
A
GLU
92
n
92
GLU
92
A
ALA
93
n
93
ALA
93
A
MET
94
n
94
MET
94
A
LYS
95
n
95
LYS
95
A
ALA
96
n
96
ALA
96
A
GLY
97
n
97
GLY
97
A
ALA
98
n
98
ALA
98
A
VAL
99
n
99
VAL
99
A
ASP
100
n
100
ASP
100
A
PHE
101
n
101
PHE
101
A
ILE
102
n
102
ILE
102
A
GLU
103
n
103
GLU
103
A
LYS
104
n
104
LYS
104
A
PRO
105
n
105
PRO
105
A
PHE
106
n
106
PHE
106
A
GLU
107
n
107
GLU
107
A
ASP
108
n
108
ASP
108
A
THR
109
n
109
THR
109
A
VAL
110
n
110
VAL
110
A
ILE
111
n
111
ILE
111
A
ILE
112
n
112
ILE
112
A
GLU
113
n
113
GLU
113
A
ALA
114
n
114
ALA
114
A
ILE
115
n
115
ILE
115
A
GLU
116
n
116
GLU
116
A
ARG
117
n
117
ARG
117
A
ALA
118
n
118
ALA
118
A
SER
119
n
119
SER
119
A
GLU
120
n
120
GLU
120
A
HIS
121
n
121
HIS
121
A
LEU
122
n
122
LEU
122
A
VAL
123
n
123
VAL
123
A
n
124
124
A
n
125
125
A
n
126
126
A
ALA
1
n
1
MET
1
B
GLN
2
n
2
GLN
2
B
ASP
3
n
3
ASP
3
B
TYR
4
n
4
TYR
4
B
THR
5
n
5
THR
5
B
VAL
6
n
6
VAL
6
B
HIS
7
n
7
HIS
7
B
ILE
8
n
8
ILE
8
B
VAL
9
n
9
VAL
9
B
ASP
10
n
10
ASP
10
B
ASP
11
n
11
ASP
11
B
GLU
12
n
12
GLU
12
B
GLU
13
n
13
GLU
13
B
PRO
14
n
14
PRO
14
B
VAL
15
n
15
VAL
15
B
ARG
16
n
16
ARG
16
B
LYS
17
n
17
LYS
17
B
SER
18
n
18
SER
18
B
LEU
19
n
19
LEU
19
B
ALA
20
n
20
ALA
20
B
PHE
21
n
21
PHE
21
B
MET
22
n
22
MET
22
B
LEU
23
n
23
LEU
23
B
THR
24
n
24
THR
24
B
MET
25
n
25
MET
25
B
ASN
26
n
26
ASN
26
B
GLY
27
n
27
GLY
27
B
PHE
28
n
28
PHE
28
B
ALA
29
n
29
ALA
29
B
VAL
30
n
30
VAL
30
B
LYS
31
n
31
LYS
31
B
MET
32
n
32
MET
32
B
HIS
33
n
33
HIS
33
B
GLN
34
n
34
GLN
34
B
SER
35
n
35
SER
35
B
ALA
36
n
36
ALA
36
B
GLU
37
n
37
GLU
37
B
ALA
38
n
38
ALA
38
B
PHE
39
n
39
PHE
39
B
LEU
40
n
40
LEU
40
B
ALA
41
n
41
ALA
41
B
PHE
42
n
42
PHE
42
B
ALA
43
n
43
ALA
43
B
PRO
44
n
44
PRO
44
B
ASP
45
n
45
ASP
45
B
VAL
46
n
46
VAL
46
B
ARG
47
n
47
ARG
47
B
ASN
48
n
48
ASN
48
B
GLY
49
n
49
GLY
49
B
VAL
50
n
50
VAL
50
B
LEU
51
n
51
LEU
51
B
VAL
52
n
52
VAL
52
B
THR
53
n
53
THR
53
B
APP
54
n
54
PHD
54
B
LEU
55
n
55
LEU
55
B
ARG
56
n
56
ARG
56
B
MET
57
n
57
MET
57
B
PRO
58
n
58
PRO
58
B
ASP
59
n
59
ASP
59
B
MET
60
n
60
MET
60
B
SER
61
n
61
SER
61
B
GLY
62
n
62
GLY
62
B
VAL
63
n
63
VAL
63
B
GLU
64
n
64
GLU
64
B
LEU
65
n
65
LEU
65
B
LEU
66
n
66
LEU
66
B
ARG
67
n
67
ARG
67
B
ASN
68
n
68
ASN
68
B
LEU
69
n
69
LEU
69
B
GLY
70
n
70
GLY
70
B
ASP
71
n
71
ASP
71
B
LEU
72
n
72
LEU
72
B
LYS
73
n
73
LYS
73
B
ILE
74
n
74
ILE
74
B
ALA
75
n
75
ASN
75
B
ILE
76
n
76
ILE
76
B
PRO
77
n
77
PRO
77
B
SER
78
n
78
SER
78
B
ILE
79
n
79
ILE
79
B
VAL
80
n
80
VAL
80
B
ILE
81
n
81
ILE
81
B
THR
82
n
82
THR
82
B
GLY
83
n
83
GLY
83
B
HIS
84
n
84
HIS
84
B
GLY
85
n
85
GLY
85
B
ASP
86
n
86
ASP
86
B
VAL
87
n
87
VAL
87
B
PRO
88
n
88
PRO
88
B
MET
89
n
89
MET
89
B
ALA
90
n
90
ALA
90
B
VAL
91
n
91
VAL
91
B
GLU
92
n
92
GLU
92
B
ALA
93
n
93
ALA
93
B
MET
94
n
94
MET
94
B
LYS
95
n
95
LYS
95
B
ALA
96
n
96
ALA
96
B
GLY
97
n
97
GLY
97
B
ALA
98
n
98
ALA
98
B
VAL
99
n
99
VAL
99
B
ASP
100
n
100
ASP
100
B
PHE
101
n
101
PHE
101
B
ILE
102
n
102
ILE
102
B
GLU
103
n
103
GLU
103
B
LYS
104
n
104
LYS
104
B
PRO
105
n
105
PRO
105
B
PHE
106
n
106
PHE
106
B
GLU
107
n
107
GLU
107
B
ASP
108
n
108
ASP
108
B
THR
109
n
109
THR
109
B
VAL
110
n
110
VAL
110
B
ILE
111
n
111
ILE
111
B
ILE
112
n
112
ILE
112
B
GLU
113
n
113
GLU
113
B
ALA
114
n
114
ALA
114
B
ILE
115
n
115
ILE
115
B
GLU
116
n
116
GLU
116
B
ARG
117
n
117
ARG
117
B
ALA
118
n
118
ALA
118
B
SER
119
n
119
SER
119
B
GLU
120
n
120
GLU
120
B
HIS
121
n
121
HIS
121
B
LEU
122
n
122
LEU
122
B
n
123
123
B
n
124
124
B
n
125
125
B
n
126
126
B
MET
1
n
1
MET
1
C
GLN
2
n
2
GLN
2
C
ASP
3
n
3
ASP
3
C
TYR
4
n
4
TYR
4
C
THR
5
n
5
THR
5
C
VAL
6
n
6
VAL
6
C
HIS
7
n
7
HIS
7
C
ILE
8
n
8
ILE
8
C
VAL
9
n
9
VAL
9
C
ASP
10
n
10
ASP
10
C
ASP
11
n
11
ASP
11
C
GLU
12
n
12
GLU
12
C
GLU
13
n
13
GLU
13
C
PRO
14
n
14
PRO
14
C
VAL
15
n
15
VAL
15
C
ARG
16
n
16
ARG
16
C
LYS
17
n
17
LYS
17
C
SER
18
n
18
SER
18
C
LEU
19
n
19
LEU
19
C
ALA
20
n
20
ALA
20
C
PHE
21
n
21
PHE
21
C
MET
22
n
22
MET
22
C
LEU
23
n
23
LEU
23
C
THR
24
n
24
THR
24
C
MET
25
n
25
MET
25
C
ASN
26
n
26
ASN
26
C
GLY
27
n
27
GLY
27
C
PHE
28
n
28
PHE
28
C
ALA
29
n
29
ALA
29
C
VAL
30
n
30
VAL
30
C
LYS
31
n
31
LYS
31
C
MET
32
n
32
MET
32
C
HIS
33
n
33
HIS
33
C
GLN
34
n
34
GLN
34
C
SER
35
n
35
SER
35
C
ALA
36
n
36
ALA
36
C
GLU
37
n
37
GLU
37
C
ALA
38
n
38
ALA
38
C
PHE
39
n
39
PHE
39
C
LEU
40
n
40
LEU
40
C
ALA
41
n
41
ALA
41
C
PHE
42
n
42
PHE
42
C
ALA
43
n
43
ALA
43
C
PRO
44
n
44
PRO
44
C
ASP
45
n
45
ASP
45
C
VAL
46
n
46
VAL
46
C
ARG
47
n
47
ARG
47
C
ASN
48
n
48
ASN
48
C
GLY
49
n
49
GLY
49
C
VAL
50
n
50
VAL
50
C
LEU
51
n
51
LEU
51
C
VAL
52
n
52
VAL
52
C
THR
53
n
53
THR
53
C
APP
54
n
54
PHD
54
C
LEU
55
n
55
LEU
55
C
ALA
56
n
56
ARG
56
C
MET
57
n
57
MET
57
C
PRO
58
n
58
PRO
58
C
ASP
59
n
59
ASP
59
C
MET
60
n
60
MET
60
C
SER
61
n
61
SER
61
C
GLY
62
n
62
GLY
62
C
VAL
63
n
63
VAL
63
C
GLU
64
n
64
GLU
64
C
LEU
65
n
65
LEU
65
C
LEU
66
n
66
LEU
66
C
ARG
67
n
67
ARG
67
C
ASN
68
n
68
ASN
68
C
LEU
69
n
69
LEU
69
C
GLY
70
n
70
GLY
70
C
ASP
71
n
71
ASP
71
C
LEU
72
n
72
LEU
72
C
LYS
73
n
73
LYS
73
C
ILE
74
n
74
ILE
74
C
ASN
75
n
75
ASN
75
C
ILE
76
n
76
ILE
76
C
PRO
77
n
77
PRO
77
C
SER
78
n
78
SER
78
C
ILE
79
n
79
ILE
79
C
VAL
80
n
80
VAL
80
C
ILE
81
n
81
ILE
81
C
THR
82
n
82
THR
82
C
GLY
83
n
83
GLY
83
C
HIS
84
n
84
HIS
84
C
GLY
85
n
85
GLY
85
C
ASP
86
n
86
ASP
86
C
VAL
87
n
87
VAL
87
C
PRO
88
n
88
PRO
88
C
MET
89
n
89
MET
89
C
ALA
90
n
90
ALA
90
C
VAL
91
n
91
VAL
91
C
GLU
92
n
92
GLU
92
C
ALA
93
n
93
ALA
93
C
MET
94
n
94
MET
94
C
LYS
95
n
95
LYS
95
C
ALA
96
n
96
ALA
96
C
GLY
97
n
97
GLY
97
C
ALA
98
n
98
ALA
98
C
VAL
99
n
99
VAL
99
C
ASP
100
n
100
ASP
100
C
PHE
101
n
101
PHE
101
C
ILE
102
n
102
ILE
102
C
GLU
103
n
103
GLU
103
C
LYS
104
n
104
LYS
104
C
PRO
105
n
105
PRO
105
C
PHE
106
n
106
PHE
106
C
GLU
107
n
107
GLU
107
C
ASP
108
n
108
ASP
108
C
THR
109
n
109
THR
109
C
VAL
110
n
110
VAL
110
C
ILE
111
n
111
ILE
111
C
ILE
112
n
112
ILE
112
C
GLU
113
n
113
GLU
113
C
ALA
114
n
114
ALA
114
C
ILE
115
n
115
ILE
115
C
GLU
116
n
116
GLU
116
C
ARG
117
n
117
ARG
117
C
ALA
118
n
118
ALA
118
C
SER
119
n
119
SER
119
C
GLU
120
n
120
GLU
120
C
HIS
121
n
121
HIS
121
C
LEU
122
n
122
LEU
122
C
n
123
123
C
n
124
124
C
n
125
125
C
n
126
126
C
author_defined_assembly
2
dimeric
author_defined_assembly
2
dimeric
A
PHD
54
ASPARTYL PHOSPHATE
A
PHD
54
ASP
B
PHD
54
ASPARTYL PHOSPHATE
B
PHD
54
ASP
C
PHD
54
ASPARTYL PHOSPHATE
C
PHD
54
ASP
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_658
-x+1,y,-z+3
crystal symmetry operation
63.5496067801
0.0000000000
166.0256475671
A
O
ALA
29
A
O
ALA
29
A
N
VAL
6
A
N
VAL
6
A
N
HIS
7
A
N
HIS
7
A
O
VAL
50
A
O
VAL
50
A
O
LEU
51
A
O
LEU
51
A
N
ILE
79
A
N
ILE
79
A
N
VAL
80
A
N
VAL
80
A
O
ASP
100
A
O
ASP
100
B
O
ALA
29
B
O
ALA
29
B
N
VAL
6
B
N
VAL
6
B
N
HIS
7
B
N
HIS
7
B
O
VAL
50
B
O
VAL
50
B
O
LEU
51
B
O
LEU
51
B
N
ILE
79
B
N
ILE
79
B
N
VAL
80
B
N
VAL
80
B
O
ASP
100
B
O
ASP
100
C
N
LYS
31
C
N
LYS
31
C
O
VAL
6
C
O
VAL
6
C
N
HIS
7
C
N
HIS
7
C
O
VAL
50
C
O
VAL
50
C
O
LEU
51
C
O
LEU
51
C
N
ILE
79
C
N
ILE
79
C
N
VAL
80
C
N
VAL
80
C
O
ASP
100
C
O
ASP
100
1
A
CG
MET
1
A
CG
MET
1
1
Y
1
A
SD
MET
1
A
SD
MET
1
1
Y
1
A
CE
MET
1
A
CE
MET
1
1
Y
1
A
CG
LEU
72
A
CG
LEU
72
1
Y
1
A
CD1
LEU
72
A
CD1
LEU
72
1
Y
1
A
CD2
LEU
72
A
CD2
LEU
72
1
Y
1
A
CG
LYS
73
A
CG
LYS
73
1
Y
1
A
CD
LYS
73
A
CD
LYS
73
1
Y
1
A
CE
LYS
73
A
CE
LYS
73
1
Y
1
A
NZ
LYS
73
A
NZ
LYS
73
1
Y
1
A
CG
ASN
75
A
CG
ASN
75
1
Y
1
A
OD1
ASN
75
A
OD1
ASN
75
1
Y
1
A
ND2
ASN
75
A
ND2
ASN
75
1
Y
1
B
CG
MET
1
B
CG
MET
1
1
Y
1
B
SD
MET
1
B
SD
MET
1
1
Y
1
B
CE
MET
1
B
CE
MET
1
1
Y
1
B
CG
ASN
75
B
CG
ASN
75
1
Y
1
B
OD1
ASN
75
B
OD1
ASN
75
1
Y
1
B
ND2
ASN
75
B
ND2
ASN
75
1
Y
1
C
CG
ARG
56
C
CG
ARG
56
1
Y
1
C
CD
ARG
56
C
CD
ARG
56
1
Y
1
C
NE
ARG
56
C
NE
ARG
56
1
Y
1
C
CZ
ARG
56
C
CZ
ARG
56
1
Y
1
C
NH1
ARG
56
C
NH1
ARG
56
1
Y
1
C
NH2
ARG
56
C
NH2
ARG
56
1
Y
1
A
ALA
124
A
ALA
124
1
Y
1
A
LEU
125
A
LEU
125
1
Y
1
A
GLU
126
A
GLU
126
1
Y
1
B
VAL
123
B
VAL
123
1
Y
1
B
ALA
124
B
ALA
124
1
Y
1
B
LEU
125
B
LEU
125
1
Y
1
B
GLU
126
B
GLU
126
1
Y
1
C
VAL
123
C
VAL
123
1
Y
1
C
ALA
124
C
ALA
124
1
Y
1
C
LEU
125
C
LEU
125
1
Y
1
C
GLU
126
C
GLU
126
1
Y
1
9.59
1.50
119.30
128.89
B
B
B
C
N
CA
MET
PRO
PRO
57
58
58
Y
1
A
ASP
10
-175.79
128.46
1
A
ASN
75
74.32
86.12
1
B
ASP
3
-102.00
72.73
1
B
LEU
55
-92.15
-60.39
1
B
ASN
75
65.23
86.27
1
B
HIS
84
-140.29
40.14
1
C
ARG
47
-106.21
-82.13
1
C
PRO
58
-21.67
-61.89
1
C
ASP
59
-100.95
-73.04
PROTEIN_REP.PARAM
PROTEIN.TOP
APP.PARAM
APP.TOP
WATER_REP.PARAM
WATER.TOP
ION.PARAM
ION.TOP
42.0
9.20
0.00
-7.68
-0.61
0.00
-8.59
0.244
0.007
0.217
0.218
0.218
2.30
24.50
1188
25999
25999
4.6
90
RANDOM
1180802.18
0.00
1,2
RESTRAINED
THROUGHOUT
0.0
0.0
MOLECULAR REPLACEMENT
ENGH & HUBER
FLAT MODEL
45.07
0.372
0.34
0.29
5.00
0.30
0.26
2.30
24.50
144
2978
20
0
2814
0.009
1.5
22.3
0.92
2.91
1.50
4.20
2.00
4.50
2.00
6.03
2.50
0.312
0.023
0.277
2.44
178
4259
6
4.0
91.8
38.0
2.3
24.5
1D5W
26027
26027
0
0
0.05
1,2
9.5
3.2
90
0.155
2.3
2.42
4.6
1,2
2.2
93
phasing
AMoRE
refinement
CNS
0.5
data reduction
MOSFLM
data scaling
CCP4
(SCALA)
PHOSPHORYLATED FIXJ RECEIVER DOMAIN
1
N
N
1
N
N
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
3
N
N
3
N
N
CHAINS B AND C CONSTITUTE ONE BIOLOGICAL MOLECULE
AND CHAINS A AND D (D GENERATED FROM A USING BIOMT
IN REMARK 350) CONSTITUTE THE OTHER.
A
GLU
12
A
GLU
12
HELX_P
A
MET
25
A
MET
25
1
1
14
A
SER
35
A
SER
35
HELX_P
A
ALA
43
A
ALA
43
1
2
9
A
PRO
44
A
PRO
44
HELX_P
A
VAL
46
A
VAL
46
5
3
3
A
SER
61
A
SER
61
HELX_P
A
LEU
72
A
LEU
72
1
4
12
A
ASP
86
A
ASP
86
HELX_P
A
ALA
96
A
ALA
96
1
5
11
A
GLU
107
A
GLU
107
HELX_P
A
GLU
120
A
GLU
120
1
6
14
B
GLU
12
B
GLU
12
HELX_P
B
ASN
26
B
ASN
26
1
7
15
B
SER
35
B
SER
35
HELX_P
B
ALA
43
B
ALA
43
1
8
9
B
PRO
44
B
PRO
44
HELX_P
B
VAL
46
B
VAL
46
5
9
3
B
SER
61
B
SER
61
HELX_P
B
LEU
72
B
LEU
72
1
10
12
B
ASP
86
B
ASP
86
HELX_P
B
ALA
96
B
ALA
96
1
11
11
B
GLU
107
B
GLU
107
HELX_P
B
GLU
120
B
GLU
120
1
12
14
C
GLU
12
C
GLU
12
HELX_P
C
ASN
26
C
ASN
26
1
13
15
C
SER
35
C
SER
35
HELX_P
C
ALA
43
C
ALA
43
1
14
9
C
PRO
44
C
PRO
44
HELX_P
C
VAL
46
C
VAL
46
5
15
3
C
SER
61
C
SER
61
HELX_P
C
LEU
72
C
LEU
72
1
16
12
C
ASP
86
C
ASP
86
HELX_P
C
ALA
96
C
ALA
96
1
17
11
C
GLU
107
C
GLU
107
HELX_P
C
LEU
122
C
LEU
122
1
18
16
covale
1.328
both
A
THR
53
A
C
THR
53
1_555
A
PHD
54
A
N
PHD
54
1_555
covale
1.332
both
A
PHD
54
A
C
PHD
54
1_555
A
LEU
55
A
N
LEU
55
1_555
covale
1.324
both
B
THR
53
B
C
THR
53
1_555
B
PHD
54
B
N
PHD
54
1_555
covale
1.333
both
B
PHD
54
B
C
PHD
54
1_555
B
LEU
55
B
N
LEU
55
1_555
covale
1.327
both
C
THR
53
C
C
THR
53
1_555
C
PHD
54
C
N
PHD
54
1_555
covale
1.330
both
C
PHD
54
C
C
PHD
54
1_555
C
LEU
55
C
N
LEU
55
1_555
GENE REGULATION
DOUBLY WOUND FIVE-STRANDED BETA/ALPHA FOLD, PHOSPHORYLATED PROTEIN, NITROGEN FIXATION REGULATION, GENE REGULATION
A
LYS
104
A
LYS
104
1
A
PRO
105
A
PRO
105
0.08
B
LYS
104
B
LYS
104
1
B
PRO
105
B
PRO
105
-0.25
C
LYS
104
C
LYS
104
1
C
PRO
105
C
PRO
105
-0.10
FIXJ_RHIME
UNP
1
1
P10958
1
126
1D5W
1
126
P10958
A
1
1
126
1
126
1D5W
1
126
P10958
B
1
1
126
1
126
1D5W
1
126
P10958
C
1
1
126
1
THR
engineered mutation
GLN
2
1D5W
A
P10958
UNP
2
2
1
ASP
engineered mutation
PHD
54
1D5W
A
P10958
UNP
54
54
1
ALA
engineered mutation
LEU
125
1D5W
A
P10958
UNP
125
125
2
THR
engineered mutation
GLN
2
1D5W
B
P10958
UNP
2
2
2
ASP
engineered mutation
PHD
54
1D5W
B
P10958
UNP
54
54
2
ALA
engineered mutation
LEU
125
1D5W
B
P10958
UNP
125
125
3
THR
engineered mutation
GLN
2
1D5W
C
P10958
UNP
2
2
3
ASP
engineered mutation
PHD
54
1D5W
C
P10958
UNP
54
54
3
ALA
engineered mutation
LEU
125
1D5W
C
P10958
UNP
125
125
5
5
5
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
parallel
A
ALA
29
A
ALA
29
A
HIS
33
A
HIS
33
A
THR
5
A
THR
5
A
VAL
9
A
VAL
9
A
GLY
49
A
GLY
49
A
THR
53
A
THR
53
A
SER
78
A
SER
78
A
THR
82
A
THR
82
A
ASP
100
A
ASP
100
A
GLU
103
A
GLU
103
B
ALA
29
B
ALA
29
B
HIS
33
B
HIS
33
B
THR
5
B
THR
5
B
VAL
9
B
VAL
9
B
GLY
49
B
GLY
49
B
THR
53
B
THR
53
B
SER
78
B
SER
78
B
THR
82
B
THR
82
B
ASP
100
B
ASP
100
B
GLU
103
B
GLU
103
C
VAL
30
C
VAL
30
C
HIS
33
C
HIS
33
C
THR
5
C
THR
5
C
VAL
9
C
VAL
9
C
GLY
49
C
GLY
49
C
THR
53
C
THR
53
C
SER
78
C
SER
78
C
THR
82
C
THR
82
C
ASP
100
C
ASP
100
C
GLU
103
C
GLU
103
BINDING SITE FOR RESIDUE SO4 C 2001
C
SO4
2001
Software
5
BINDING SITE FOR RESIDUE SO4 B 2002
B
SO4
2002
Software
5
BINDING SITE FOR RESIDUE SO4 A 2003
A
SO4
2003
Software
3
BINDING SITE FOR RESIDUE SO4 C 2004
C
SO4
2004
Software
4
B
LYS
17
B
LYS
17
5
4_546
B
HOH
1101
I
HOH
5
4_546
C
LYS
31
C
LYS
31
5
1_555
C
MET
32
C
MET
32
5
1_555
C
HOH
1078
J
HOH
5
1_555
B
LEU
66
B
LEU
66
5
1_555
B
LEU
69
B
LEU
69
5
1_555
B
ASN
75
B
ASN
75
5
1_555
B
ILE
76
B
ILE
76
5
1_555
B
ALA
96
B
ALA
96
5
1_555
A
LEU
69
A
LEU
69
3
1_555
A
ILE
76
A
ILE
76
3
1_555
A
ALA
96
A
ALA
96
3
1_555
C
LEU
66
C
LEU
66
4
1_555
C
LEU
69
C
LEU
69
4
1_555
C
ILE
74
C
ILE
74
4
1_555
C
ILE
76
C
ILE
76
4
1_555
5
C 1 2 1