0.030093 0.017374 0.000000 0.000000 0.034749 0.000000 0.000000 0.000000 0.010552 0.00000 0.00000 0.00000 Lipanov, A. Kopka, M.L. Kaczor-Grzeskowiak, M. Quintana, J. Dickerson, R.E. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 33.230 33.230 94.770 C10 H14 N5 O6 P 331.222 y 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE DNA linking C9 H14 N3 O7 P 307.197 y 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE DNA linking C10 H14 N5 O7 P 347.221 y 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE DNA linking C10 H13 N4 O7 P 332.207 y 2'-DEOXYINOSINE-5'-MONOPHOSPHATE DNA linking C10 H15 N2 O8 P 322.208 y THYMIDINE-5'-MONOPHOSPHATE DNA linking H2 O 18.015 WATER non-polymer Mg 2 24.305 MAGNESIUM ION non-polymer N 1 N O N 2 N P N 3 N O N 4 N O N 5 N O N 6 N C N 7 R C N 8 N O N 9 S C N 10 N O N 11 N C N 12 R C Y 13 N N Y 14 N C Y 15 N N Y 16 N C Y 17 N C N 18 N N Y 19 N N Y 20 N C Y 21 N N Y 22 N C N 23 N H N 24 N H N 25 N H N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N O N 38 N P N 39 N O N 40 N O N 41 N O N 42 N C N 43 R C N 44 N O N 45 S C N 46 N O N 47 N C N 48 R C N 49 N N N 50 N C N 51 N O N 52 N N N 53 N C N 54 N N N 55 N C N 56 N C N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N H N 64 N H N 65 N H N 66 N H N 67 N H N 68 N H N 69 N H N 70 N H N 71 N O N 72 N P N 73 N O N 74 N O N 75 N O N 76 N C N 77 R C N 78 N O N 79 S C N 80 N O N 81 N C N 82 R C Y 83 N N Y 84 N C Y 85 N N Y 86 N C N 87 N C N 88 N O N 89 N N N 90 N C N 91 N N N 92 N N Y 93 N C N 94 N H N 95 N H N 96 N H N 97 N H N 98 N H N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N H N 108 N O N 109 N P N 110 N O N 111 N O N 112 N O N 113 N C N 114 R C N 115 N O N 116 S C N 117 N O N 118 N C N 119 R C Y 120 N N Y 121 N C Y 122 N N Y 123 N C N 124 N C N 125 N O N 126 N N N 127 N C N 128 N N Y 129 N C N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N O N 144 N P N 145 N O N 146 N O N 147 N O N 148 N C N 149 R C N 150 N O N 151 S C N 152 N O N 153 N C N 154 R C N 155 N N N 156 N C N 157 N O N 158 N N N 159 N C N 160 N O N 161 N C N 162 N C N 163 N C N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N H N 171 N H N 172 N H N 173 N H N 174 N H N 175 N H N 176 N H N 177 N H N 178 N H N 179 N O N 180 N H N 181 N H N 182 N MG N 1 N sing N 2 N sing N 3 N doub N 4 N sing N 5 N sing N 6 N sing N 7 N sing N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing Y 24 N sing Y 25 N sing Y 26 N doub N 27 N sing Y 28 N sing Y 29 N sing Y 30 N doub N 31 N sing Y 32 N doub N 33 N sing N 34 N sing Y 35 N sing Y 36 N doub N 37 N sing Y 38 N sing N 39 N sing N 40 N sing N 41 N doub N 42 N sing N 43 N sing N 44 N sing N 45 N sing N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N sing N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N doub N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N doub N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N sing N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N sing Y 97 N sing Y 98 N sing Y 99 N doub N 100 N sing Y 101 N sing N 102 N sing Y 103 N doub N 104 N doub N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N doub N 110 N sing N 111 N sing N 112 N sing N 113 N sing N 114 N sing N 115 N doub N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing Y 136 N sing Y 137 N sing Y 138 N doub N 139 N sing Y 140 N sing N 141 N sing Y 142 N doub N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N doub N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N doub N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N doub N 176 N sing N 177 N sing N 178 N sing N 179 N doub N 180 N sing N 181 N sing N 182 N doub N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing US Biochemistry BICHAW 0033 0006-2960 32 1373 1389 10.1021/bi00056a024 8448146 Structure of the B-DNA decamer C-C-A-A-C-I-T-T-G-G in two different space groups: conformational flexibility of B-DNA. 1993 10.2210/pdb1d60/pdb pdb_00001d60 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 248.00 1 DIFFRACTOMETER RIGAKU AFC-5R x-ray 1 1.0 ROTATING ANODE 3029.990 DNA (5'-D(*CP*CP*AP*AP*CP*IP*TP*TP*GP*G)-3') 2 syn polymer 24.305 MAGNESIUM ION 1 syn non-polymer 18.015 water 42 nat water no no (DC)(DC)(DA)(DA)(DC)(DI)(DT)(DT)(DG)(DG) CCAACITTGG A,B polydeoxyribonucleotide n n n n n n n n n n 2.49 50.65 VAPOR DIFFUSION, SITTING DROP 7.00 pH 7.00, VAPOR DIFFUSION, SITTING DROP, temperature 277.00K 277.00 WATER 1 MPD 1 MG ACETATE 1 NA CACODYLATE 1 SPERMINE 1 WATER 2 MPD 2 -2.681 1 19 A 1 B 20 -3.076 A_DC1:DG20_B 1 -2.407 -0.208 0.507 -0.364 13.463 1 19 A 2 B 19 -2.660 A_DC2:DG19_B 2 -8.175 0.597 -0.796 -0.507 0.176 1 20 A 3 B 18 0.513 A_DA3:DT18_B 3 -7.383 -0.601 -0.167 -0.459 3.565 1 20 A 4 B 17 1.639 A_DA4:DT17_B 4 -13.523 0.011 0.160 -0.200 -8.754 1 20 A 7 B 14 -7.945 A_DT7:DA14_B 5 -9.301 -0.474 -0.116 -0.206 -7.927 1 20 A 8 B 13 2.981 A_DT8:DA13_B 6 -10.534 0.465 0.032 -0.114 -3.857 1 19 A 9 B 12 -0.698 A_DG9:DC12_B 7 0.462 0.324 -0.282 -0.169 7.320 1 19 A 10 B 11 1.380 A_DG10:DC11_B 8 -5.135 0.310 0.046 -0.160 2.755 33.616 A A 1 2 8.651 B B 20 19 2.857 4.862 0.252 0.320 AA_DC1DC2:DG19DG20_BB 1 13.005 -23.142 30.691 -0.161 1.476 3.748 30.927 A A 2 3 14.397 B B 19 18 3.731 7.587 0.265 0.742 AA_DC2DA3:DT18DG19_BB 2 -3.444 6.535 29.810 -0.320 -1.274 3.234 40.035 A A 3 4 2.870 B B 18 17 3.230 1.961 -0.113 0.258 AA_DA3DA4:DT17DT18_BB 3 -4.099 5.999 39.787 0.154 -0.299 3.256 39.630 A A 7 8 -0.811 B B 14 13 3.263 -0.550 0.330 0.039 AA_DT7DT8:DA13DA14_BB 4 -0.723 1.067 39.620 0.122 -0.571 3.420 34.770 A A 8 9 10.356 B B 13 12 3.288 6.149 0.291 0.982 AA_DT8DG9:DC12DA13_BB 5 3.356 -5.652 34.079 0.670 0.044 3.263 30.691 A A 9 10 2.168 B B 12 11 3.219 1.146 -0.283 0.946 AA_DG9DG10:DC11DC12_BB 6 -2.177 4.117 30.595 1.563 0.110 chem_comp_atom chem_comp_bond database_2 pdbx_struct_conn_angle struct_conn struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 1993-04-15 1 1 2008-05-22 1 2 2011-07-13 1 3 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr2_auth_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id BNL Y NDB 1992-02-26 REL REL MG MAGNESIUM ION HOH water MO6 21 2 MG MG 21 B HOH 22 3 HOH HOH 22 A HOH 23 3 HOH HOH 23 A HOH 24 3 HOH HOH 24 A HOH 25 3 HOH HOH 25 A HOH 26 3 HOH HOH 26 A HOH 28 3 HOH HOH 28 A HOH 31 3 HOH HOH 31 A HOH 36 3 HOH HOH 36 A HOH 37 3 HOH HOH 37 A HOH 38 3 HOH HOH 38 A HOH 39 3 HOH HOH 39 A HOH 40 3 HOH HOH 40 A HOH 47 3 HOH HOH 47 A HOH 49 3 HOH HOH 49 A HOH 50 3 HOH HOH 50 A HOH 51 3 HOH HOH 51 A HOH 56 3 HOH HOH 56 A HOH 57 3 HOH HOH 57 A HOH 27 3 HOH HOH 27 B HOH 29 3 HOH HOH 29 B HOH 30 3 HOH HOH 30 B HOH 32 3 HOH HOH 32 B HOH 33 3 HOH HOH 33 B HOH 34 3 HOH HOH 34 B HOH 35 3 HOH HOH 35 B HOH 41 3 HOH HOH 41 B HOH 42 3 HOH HOH 42 B HOH 43 3 HOH HOH 43 B HOH 44 3 HOH HOH 44 B HOH 45 3 HOH HOH 45 B HOH 46 3 HOH HOH 46 B HOH 48 3 HOH HOH 48 B HOH 52 3 HOH HOH 52 B HOH 53 3 HOH HOH 53 B HOH 54 3 HOH HOH 54 B HOH 55 3 HOH HOH 55 B MO6 21 3 HOH HOH 58 B MO6 21 3 HOH HOH 59 B MO6 21 3 HOH HOH 60 B MO6 21 3 HOH HOH 61 B MO6 21 3 HOH HOH 62 B MO6 21 3 HOH HOH 63 B C 1 n 1 DC 1 A C 2 n 2 DC 2 A A 3 n 3 DA 3 A A 4 n 4 DA 4 A C 5 n 5 DC 5 A I 6 n 6 DI 6 A T 7 n 7 DT 7 A T 8 n 8 DT 8 A G 9 n 9 DG 9 A G 10 n 10 DG 10 A C 11 n 1 DC 11 B C 12 n 2 DC 12 B A 13 n 3 DA 13 B A 14 n 4 DA 14 B C 15 n 5 DC 15 B I 16 n 6 DI 16 B T 17 n 7 DT 17 B T 18 n 8 DT 18 B G 19 n 9 DG 19 B G 20 n 10 DG 20 B author_defined_assembly 2 dimeric B HOH 58 E O HOH 1_555 B MG 21 C MG MG 1_555 B HOH 59 E O HOH 1_555 175.1 B HOH 58 E O HOH 1_555 B MG 21 C MG MG 1_555 B HOH 60 E O HOH 1_555 86.9 B HOH 59 E O HOH 1_555 B MG 21 C MG MG 1_555 B HOH 60 E O HOH 1_555 89.0 B HOH 58 E O HOH 1_555 B MG 21 C MG MG 1_555 B HOH 61 E O HOH 1_555 87.3 B HOH 59 E O HOH 1_555 B MG 21 C MG MG 1_555 B HOH 61 E O HOH 1_555 96.8 B HOH 60 E O HOH 1_555 B MG 21 C MG MG 1_555 B HOH 61 E O HOH 1_555 174.2 B HOH 58 E O HOH 1_555 B MG 21 C MG MG 1_555 B HOH 62 E O HOH 1_555 85.6 B HOH 59 E O HOH 1_555 B MG 21 C MG MG 1_555 B HOH 62 E O HOH 1_555 91.8 B HOH 60 E O HOH 1_555 B MG 21 C MG MG 1_555 B HOH 62 E O HOH 1_555 91.4 B HOH 61 E O HOH 1_555 B MG 21 C MG MG 1_555 B HOH 62 E O HOH 1_555 88.3 B HOH 58 E O HOH 1_555 B MG 21 C MG MG 1_555 B HOH 63 E O HOH 1_555 90.9 B HOH 59 E O HOH 1_555 B MG 21 C MG MG 1_555 B HOH 63 E O HOH 1_555 91.9 B HOH 60 E O HOH 1_555 B MG 21 C MG MG 1_555 B HOH 63 E O HOH 1_555 91.6 B HOH 61 E O HOH 1_555 B MG 21 C MG MG 1_555 B HOH 63 E O HOH 1_555 88.3 B HOH 62 E O HOH 1_555 B MG 21 C MG MG 1_555 B HOH 63 E O HOH 1_555 175.3 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 -3.81 0.40 104.50 100.69 A A A O4' C4' C3' DC DC DC 1 1 1 N 1 7.68 0.30 108.30 115.98 A A A O4' C1' N1 DC DC DC 1 1 1 N 1 17.09 1.20 119.70 136.79 A A A C3' O3' P DC DC DC 1 1 2 Y 1 -12.78 1.60 120.90 108.12 A A A P O5' C5' DC DC DC 2 2 2 N 1 4.69 0.30 108.30 112.99 A A A O4' C1' N1 DC DC DC 2 2 2 N 1 35.07 1.20 119.70 154.77 A A A C3' O3' P DC DC DA 2 2 3 Y 1 17.04 1.60 120.90 137.94 A A A P O5' C5' DA DA DA 3 3 3 N 1 7.79 0.30 108.30 116.09 A A A O4' C1' N9 DA DA DA 3 3 3 N 1 -5.75 0.50 129.30 123.55 A A A N1 C2 N3 DA DA DA 3 3 3 N 1 3.12 0.50 110.60 113.72 A A A C2 N3 C4 DA DA DA 3 3 3 N 1 -3.60 0.60 118.60 115.00 A A A N1 C6 N6 DA DA DA 3 3 3 N 1 5.30 0.80 123.70 129.00 A A A C5 C6 N6 DA DA DA 3 3 3 N 1 4.48 0.30 108.30 112.78 A A A O4' C1' N9 DA DA DA 4 4 4 N 1 -4.51 0.50 129.30 124.79 A A A N1 C2 N3 DA DA DA 4 4 4 N 1 12.87 1.20 119.70 132.57 A A A C3' O3' P DA DA DC 4 4 5 Y 1 -6.82 1.00 110.10 103.28 A A A C1' O4' C4' DC DC DC 5 5 5 N 1 11.27 1.40 114.30 125.57 A A A N1 C1' C2' DC DC DC 5 5 5 N 1 7.07 1.10 110.50 117.57 A A A O3' P OP1 DC DI DI 5 6 6 Y 1 19.13 1.20 119.70 138.83 A A A C3' O3' P DI DI DT 6 6 7 Y 1 -6.89 0.80 109.40 102.51 A A A O5' C5' C4' DT DT DT 7 7 7 N 1 5.16 0.60 114.60 119.76 A A A N1 C2 N3 DT DT DT 7 7 7 N 1 -6.18 0.60 127.20 121.02 A A A C2 N3 C4 DT DT DT 7 7 7 N 1 4.12 0.60 115.20 119.32 A A A N3 C4 C5 DT DT DT 7 7 7 N 1 -7.04 0.60 122.30 115.26 A A A N3 C2 O2 DT DT DT 7 7 7 N 1 -4.50 0.60 119.90 115.40 A A A N3 C4 O4 DT DT DT 7 7 7 N 1 10.94 1.20 119.70 130.64 A A A C3' O3' P DT DT DT 7 7 8 Y 1 -13.69 1.50 119.60 105.91 A A A OP1 P OP2 DT DT DT 8 8 8 N 1 11.99 1.20 110.70 122.69 A A A O5' P OP1 DT DT DT 8 8 8 N 1 2.78 0.30 108.30 111.08 A A A O4' C1' N1 DT DT DT 8 8 8 N 1 4.15 0.60 114.60 118.75 A A A N1 C2 N3 DT DT DT 8 8 8 N 1 -6.63 0.60 127.20 120.57 A A A C2 N3 C4 DT DT DT 8 8 8 N 1 5.10 0.60 115.20 120.30 A A A N3 C4 C5 DT DT DT 8 8 8 N 1 -4.28 0.60 122.90 118.62 A A A C6 C5 C7 DT DT DT 8 8 8 N 1 -8.79 0.80 109.40 100.61 A A A O5' C5' C4' DG DG DG 9 9 9 N 1 4.82 0.30 108.30 113.12 A A A O4' C1' N9 DG DG DG 9 9 9 N 1 -3.76 0.60 125.10 121.34 A A A C6 N1 C2 DG DG DG 9 9 9 N 1 3.54 0.50 111.50 115.04 A A A C5 C6 N1 DG DG DG 9 9 9 N 1 -4.43 0.60 119.90 115.47 A A A N1 C6 O6 DG DG DG 9 9 9 N 1 23.13 1.20 119.70 142.83 A A A C3' O3' P DG DG DG 9 9 10 Y 1 -6.62 0.80 105.90 99.28 A A A O4' C1' C2' DG DG DG 10 10 10 N 1 -6.21 0.70 108.00 101.79 A A A O4' C1' N9 DG DG DG 10 10 10 N 1 -4.83 0.70 119.90 115.07 A A A N3 C2 N2 DG DG DG 10 10 10 N 1 4.11 0.60 119.90 124.01 A A A N1 C6 O6 DG DG DG 10 10 10 N 1 -6.01 0.60 128.60 122.59 A A A C5 C6 O6 DG DG DG 10 10 10 N 1 -3.09 0.40 121.90 118.81 B B B N3 C4 C5 DC DC DC 11 11 11 N 1 4.60 0.60 118.90 123.50 B B B N1 C2 O2 DC DC DC 11 11 11 N 1 13.65 1.20 119.70 133.35 B B B C3' O3' P DC DC DC 11 11 12 Y 1 8.68 1.10 110.50 119.18 B B B O3' P OP2 DC DC DC 11 12 12 Y 1 -7.98 0.80 109.40 101.42 B B B O5' C5' C4' DC DC DC 12 12 12 N 1 4.01 0.60 118.90 122.91 B B B N1 C2 O2 DC DC DC 12 12 12 N 1 8.39 1.20 110.70 119.09 B B B O5' P OP2 DA DA DA 13 13 13 N 1 6.61 1.10 109.80 116.41 B B B C5' C4' O4' DA DA DA 13 13 13 N 1 4.24 0.70 110.30 114.54 B B B C1' O4' C4' DA DA DA 13 13 13 N 1 6.40 0.30 108.30 114.70 B B B O4' C1' N9 DA DA DA 13 13 13 N 1 -3.52 0.50 129.30 125.78 B B B N1 C2 N3 DA DA DA 13 13 13 N 1 8.25 1.20 119.70 127.95 B B B C3' O3' P DA DA DA 13 13 14 Y 1 -7.08 0.80 109.40 102.32 B B B O5' C5' C4' DA DA DA 14 14 14 N 1 -4.57 0.50 129.30 124.73 B B B N1 C2 N3 DA DA DA 14 14 14 N 1 3.24 0.50 110.60 113.84 B B B C2 N3 C4 DA DA DA 14 14 14 N 1 3.45 0.50 119.90 123.35 B B B C2 N3 C4 DC DC DC 15 15 15 N 1 3.69 0.60 118.90 122.59 B B B N1 C2 O2 DC DC DC 15 15 15 N 1 26.36 1.20 119.70 146.06 B B B C3' O3' P DC DC DI 15 15 16 Y 1 8.08 1.20 119.70 127.78 B B B C3' O3' P DI DI DT 16 16 17 Y 1 11.23 1.20 110.70 121.93 B B B O5' P OP2 DT DT DT 17 17 17 N 1 -6.10 0.80 109.40 103.30 B B B O5' C5' C4' DT DT DT 17 17 17 N 1 12.81 1.60 120.90 133.71 B B B P O5' C5' DT DT DT 17 17 17 N 1 -4.23 0.40 104.50 100.27 B B B O4' C4' C3' DT DT DT 17 17 17 N 1 -6.80 1.00 110.10 103.30 B B B C1' O4' C4' DT DT DT 17 17 17 N 1 -4.95 0.80 105.90 100.95 B B B O4' C1' C2' DT DT DT 17 17 17 N 1 -4.26 0.60 127.20 122.94 B B B C2 N3 C4 DT DT DT 17 17 17 N 1 4.09 0.60 119.00 123.09 B B B C4 C5 C7 DT DT DT 17 17 17 N 1 -5.33 0.60 122.90 117.57 B B B C6 C5 C7 DT DT DT 17 17 17 N 1 16.33 1.20 119.70 136.03 B B B C3' O3' P DT DT DT 17 17 18 Y 1 -5.82 0.80 109.40 103.58 B B B O5' C5' C4' DT DT DT 18 18 18 N 1 23.52 1.60 120.90 144.42 B B B P O5' C5' DT DT DT 18 18 18 N 1 -4.84 0.80 105.90 101.06 B B B O4' C1' C2' DT DT DT 18 18 18 N 1 -9.28 0.70 108.00 98.72 B B B O4' C1' N1 DT DT DT 18 18 18 N 1 -4.49 0.60 127.20 122.71 B B B C2 N3 C4 DT DT DT 18 18 18 N 1 -5.47 0.80 123.10 117.63 B B B N1 C2 O2 DT DT DT 18 18 18 N 1 4.14 0.60 119.00 123.14 B B B C4 C5 C7 DT DT DT 18 18 18 N 1 -4.20 0.60 122.90 118.70 B B B C6 C5 C7 DT DT DT 18 18 18 N 1 9.02 1.20 119.70 128.72 B B B C3' O3' P DT DT DG 18 18 19 Y 1 9.97 1.60 120.90 130.87 B B B P O5' C5' DG DG DG 19 19 19 N 1 21.25 1.20 119.70 140.95 B B B C3' O3' P DG DG DG 19 19 20 Y 1 -10.10 1.50 119.60 109.50 B B B OP1 P OP2 DG DG DG 20 20 20 N 1 25.14 1.60 120.90 146.04 B B B P O5' C5' DG DG DG 20 20 20 N 1 13.12 0.30 108.30 121.42 B B B O4' C1' N9 DG DG DG 20 20 20 N 1 -3.85 0.60 125.10 121.25 B B B C6 N1 C2 DG DG DG 20 20 20 N 1 3.19 0.50 111.50 114.69 B B B C5 C6 N1 DG DG DG 20 20 20 N 1 A A N3 C4 DC DC 1 1 0.045 0.007 1.335 1.380 N 1 B B O3' P DC DI 15 16 -0.079 0.012 1.607 1.528 Y 0.1620000 2.200 8.000 1725 1 2.000 TR isotropic TR isotropic 2.200 8.000 36 445 7 402 0 fix fix 2.200 8.000 1D60 3202 1725 2.000 1 refinement NUCLSQ THE STRUCTURE OF THE B-DNA DECAMER C-C-A-A-C-I-T-T-G-G: TRIGONAL FORM 1 N N 1 N N 2 N N 3 N N 3 N N metalc 2.063 B MG 21 C MG MG 1_555 B HOH 58 E O HOH 1_555 metalc 1.945 B MG 21 C MG MG 1_555 B HOH 59 E O HOH 1_555 metalc 1.985 B MG 21 C MG MG 1_555 B HOH 60 E O HOH 1_555 metalc 1.974 B MG 21 C MG MG 1_555 B HOH 61 E O HOH 1_555 metalc 2.037 B MG 21 C MG MG 1_555 B HOH 62 E O HOH 1_555 metalc 1.965 B MG 21 C MG MG 1_555 B HOH 63 E O HOH 1_555 hydrog WATSON-CRICK A DC 1 A N3 DC 1 1_555 B DG 20 B N1 DG 10 1_555 hydrog WATSON-CRICK A DC 1 A N4 DC 1 1_555 B DG 20 B O6 DG 10 1_555 hydrog WATSON-CRICK A DC 1 A O2 DC 1 1_555 B DG 20 B N2 DG 10 1_555 hydrog WATSON-CRICK A DC 2 A N3 DC 2 1_555 B DG 19 B N1 DG 9 1_555 hydrog WATSON-CRICK A DC 2 A N4 DC 2 1_555 B DG 19 B O6 DG 9 1_555 hydrog WATSON-CRICK A DC 2 A O2 DC 2 1_555 B DG 19 B N2 DG 9 1_555 hydrog WATSON-CRICK A DA 3 A N1 DA 3 1_555 B DT 18 B N3 DT 8 1_555 hydrog WATSON-CRICK A DA 3 A N6 DA 3 1_555 B DT 18 B O4 DT 8 1_555 hydrog WATSON-CRICK A DA 4 A N1 DA 4 1_555 B DT 17 B N3 DT 7 1_555 hydrog WATSON-CRICK A DA 4 A N6 DA 4 1_555 B DT 17 B O4 DT 7 1_555 hydrog WATSON-CRICK A DT 7 A N3 DT 7 1_555 B DA 14 B N1 DA 4 1_555 hydrog WATSON-CRICK A DT 7 A O4 DT 7 1_555 B DA 14 B N6 DA 4 1_555 hydrog WATSON-CRICK A DT 8 A N3 DT 8 1_555 B DA 13 B N1 DA 3 1_555 hydrog WATSON-CRICK A DT 8 A O4 DT 8 1_555 B DA 13 B N6 DA 3 1_555 hydrog WATSON-CRICK A DG 9 A N1 DG 9 1_555 B DC 12 B N3 DC 2 1_555 hydrog WATSON-CRICK A DG 9 A N2 DG 9 1_555 B DC 12 B O2 DC 2 1_555 hydrog WATSON-CRICK A DG 9 A O6 DG 9 1_555 B DC 12 B N4 DC 2 1_555 hydrog WATSON-CRICK A DG 10 A N1 DG 10 1_555 B DC 11 B N3 DC 1 1_555 hydrog WATSON-CRICK A DG 10 A N2 DG 10 1_555 B DC 11 B O2 DC 1 1_555 hydrog WATSON-CRICK A DG 10 A O6 DG 10 1_555 B DC 11 B N4 DC 1 1_555 DNA B-DNA, DOUBLE HELIX, MODIFIED, DNA 1D60 PDB 1 1D60 1 10 1D60 1 10 1D60 A 1 1 10 11 20 1D60 11 20 1D60 B 1 1 10 BINDING SITE FOR RESIDUE MG B 21 B MG 21 Software 6 B HOH 58 E HOH 6 1_555 B HOH 59 E HOH 6 1_555 B HOH 60 E HOH 6 1_555 B HOH 61 E HOH 6 1_555 B HOH 62 E HOH 6 1_555 B HOH 63 E HOH 6 1_555 154 P 32 2 1