0.040209
0.000000
0.000000
0.000000
0.024450
0.000000
0.000000
0.000000
0.015235
0.00000
0.00000
0.00000
Edwards, K.J.
Brown, D.G.
Spink, N.
Neidle, S.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
24.870
40.900
65.640
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
Y
13
N
N
Y
14
N
C
Y
15
N
N
Y
16
N
C
Y
17
N
C
N
18
N
N
Y
19
N
N
Y
20
N
C
Y
21
N
N
Y
22
N
C
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
O
N
38
N
P
N
39
N
O
N
40
N
O
N
41
N
O
N
42
N
C
N
43
R
C
N
44
N
O
N
45
S
C
N
46
N
O
N
47
N
C
N
48
R
C
N
49
N
N
N
50
N
C
N
51
N
O
N
52
N
N
N
53
N
C
N
54
N
N
N
55
N
C
N
56
N
C
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
O
N
72
N
P
N
73
N
O
N
74
N
O
N
75
N
O
N
76
N
C
N
77
R
C
N
78
N
O
N
79
S
C
N
80
N
O
N
81
N
C
N
82
R
C
Y
83
N
N
Y
84
N
C
Y
85
N
N
Y
86
N
C
N
87
N
C
N
88
N
O
N
89
N
N
N
90
N
C
N
91
N
N
N
92
N
N
Y
93
N
C
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
O
N
109
N
P
N
110
N
O
N
111
N
O
N
112
N
O
N
113
N
C
N
114
R
C
N
115
N
O
N
116
S
C
N
117
N
O
N
118
N
C
N
119
R
C
N
120
N
N
N
121
N
C
N
122
N
O
N
123
N
N
N
124
N
C
N
125
N
O
N
126
N
C
N
127
N
C
N
128
N
C
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
O
N
145
N
H
N
146
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
Y
24
N
sing
Y
25
N
sing
Y
26
N
doub
N
27
N
sing
Y
28
N
sing
Y
29
N
sing
Y
30
N
doub
N
31
N
sing
Y
32
N
doub
N
33
N
sing
N
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
sing
N
102
N
sing
Y
103
N
doub
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
226
1161
1173
10.1016/0022-2836(92)91059-X
1518049
Molecular structure of the B-DNA dodecamer d(CGCAAATTTGCG)2. An examination of propeller twist and minor-groove water structure at 2.2 A resolution.
1992
10.2210/pdb1d65/pdb
pdb_00001d65
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
292.00
1
AREA DETECTOR
XENTRONICS
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
ELLIOTT GX-21
3662.404
DNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3')
2
syn
polymer
18.015
water
71
nat
water
no
no
(DC)(DG)(DC)(DA)(DA)(DA)(DT)(DT)(DT)(DG)(DC)(DG)
CGCAAATTTGCG
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
n
n
2.28
46.02
VAPOR DIFFUSION, HANGING DROP
7.00
pH 7.00, VAPOR DIFFUSION, HANGING DROP, temperature 289.00K
289.00
WATER
1
MPD
1
MGCL2
1
SPERMINE
1
NA CACODYLATE
1
WATER
2
MPD
2
-6.680
1
19
A
1
B
24
-0.428
A_DC1:DG24_B
1
-17.852
-0.078
0.265
-0.123
-4.715
1
19
A
2
B
23
-4.383
A_DG2:DC23_B
2
-12.656
-0.292
-0.063
-0.178
-7.276
1
19
A
3
B
22
-0.046
A_DC3:DG22_B
3
-6.814
0.002
0.096
-0.072
11.988
1
20
A
4
B
21
-3.691
A_DA4:DT21_B
4
-11.846
0.189
-0.425
0.000
6.525
1
20
A
5
B
20
-2.798
A_DA5:DT20_B
5
-19.664
0.080
-0.055
-0.079
4.408
1
20
A
6
B
19
-0.101
A_DA6:DT19_B
6
-20.294
0.042
0.280
-0.166
1.988
1
20
A
7
B
18
-0.329
A_DT7:DA18_B
7
-15.124
-0.176
0.071
-0.076
-7.423
1
20
A
8
B
17
-3.265
A_DT8:DA17_B
8
-18.014
0.235
0.099
-0.157
-4.851
1
20
A
9
B
16
-2.679
A_DT9:DA16_B
9
-14.596
0.090
-0.279
-0.120
9.030
1
19
A
10
B
15
0.825
A_DG10:DC15_B
10
0.261
-0.057
0.265
-0.095
5.513
1
19
A
11
B
14
-6.768
A_DC11:DG14_B
11
-17.886
0.274
0.192
-0.237
5.608
1
19
A
12
B
13
-4.700
A_DG12:DC13_B
12
13.365
-0.208
-0.067
-0.194
3.392
35.665
A
A
1
2
7.047
B
B
24
23
3.389
4.305
-0.345
0.356
AA_DC1DG2:DC23DG24_BB
1
1.383
-2.263
35.386
-0.068
0.773
3.370
41.976
A
A
2
3
-7.816
B
B
23
22
3.436
-5.583
0.691
0.430
AA_DG2DC3:DG22DC23_BB
2
1.070
-1.498
41.606
1.206
-0.849
3.038
29.122
A
A
3
4
11.092
B
B
22
21
3.039
5.508
-0.214
0.827
AA_DC3DA4:DT21DG22_BB
3
5.835
-11.749
28.018
0.503
1.634
3.416
35.902
A
A
4
5
4.118
B
B
21
20
3.450
2.533
0.141
-0.025
AA_DA4DA5:DT20DT21_BB
4
-3.088
5.020
35.686
-0.422
-0.694
3.273
39.145
A
A
5
6
8.420
B
B
20
19
3.349
5.621
0.254
-0.185
AA_DA5DA6:DT19DT20_BB
5
-2.137
3.202
38.699
-0.963
-0.640
3.287
28.105
A
A
6
7
2.631
B
B
19
18
3.331
1.277
-0.126
-0.864
AA_DA6DT7:DA18DT19_BB
6
0.404
-0.833
28.074
-2.082
0.356
3.492
40.304
A
A
7
8
0.597
B
B
18
17
3.494
0.411
-0.339
-0.141
AA_DT7DT8:DA17DA18_BB
7
0.062
-0.091
40.302
-0.254
0.500
3.236
38.420
A
A
8
9
-3.609
B
B
17
16
3.271
-2.369
-0.074
0.040
AA_DT8DT9:DA16DA17_BB
8
4.343
-6.616
38.112
0.355
0.653
2.961
30.866
A
A
9
10
1.886
B
B
16
15
3.116
0.996
0.592
1.103
AA_DT9DG10:DC15DA16_BB
9
-6.509
12.319
30.172
1.890
-2.301
3.477
42.415
A
A
10
11
-13.022
B
B
15
14
3.700
-9.351
-0.824
0.644
AA_DG10DC11:DG14DC15_BB
10
0.256
-0.357
41.417
1.947
1.168
3.424
37.171
A
A
11
12
-11.373
B
B
14
13
3.571
-7.200
0.660
0.651
AA_DC11DG12:DC13DG14_BB
11
2.791
-4.409
36.388
2.059
-0.633
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
1993-01-15
1
1
2008-05-22
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
BNL
Y
NDB
1992-03-02
REL
REL
HOH
water
HOH
25
2
HOH
HOH
25
A
HOH
28
2
HOH
HOH
28
A
HOH
30
2
HOH
HOH
30
A
HOH
31
2
HOH
HOH
31
A
HOH
35
2
HOH
HOH
35
A
HOH
36
2
HOH
HOH
36
A
HOH
38
2
HOH
HOH
38
A
HOH
40
2
HOH
HOH
40
A
HOH
43
2
HOH
HOH
43
A
HOH
44
2
HOH
HOH
44
A
HOH
45
2
HOH
HOH
45
A
HOH
47
2
HOH
HOH
47
A
HOH
48
2
HOH
HOH
48
A
HOH
49
2
HOH
HOH
49
A
HOH
50
2
HOH
HOH
50
A
HOH
53
2
HOH
HOH
53
A
HOH
54
2
HOH
HOH
54
A
HOH
55
2
HOH
HOH
55
A
HOH
56
2
HOH
HOH
56
A
HOH
59
2
HOH
HOH
59
A
HOH
61
2
HOH
HOH
61
A
HOH
62
2
HOH
HOH
62
A
HOH
63
2
HOH
HOH
63
A
HOH
67
2
HOH
HOH
67
A
HOH
68
2
HOH
HOH
68
A
HOH
69
2
HOH
HOH
69
A
HOH
70
2
HOH
HOH
70
A
HOH
76
2
HOH
HOH
76
A
HOH
77
2
HOH
HOH
77
A
HOH
82
2
HOH
HOH
82
A
HOH
83
2
HOH
HOH
83
A
HOH
84
2
HOH
HOH
84
A
HOH
85
2
HOH
HOH
85
A
HOH
86
2
HOH
HOH
86
A
HOH
88
2
HOH
HOH
88
A
HOH
89
2
HOH
HOH
89
A
HOH
90
2
HOH
HOH
90
A
HOH
91
2
HOH
HOH
91
A
HOH
95
2
HOH
HOH
95
A
HOH
26
2
HOH
HOH
26
B
HOH
27
2
HOH
HOH
27
B
HOH
29
2
HOH
HOH
29
B
HOH
32
2
HOH
HOH
32
B
HOH
33
2
HOH
HOH
33
B
HOH
34
2
HOH
HOH
34
B
HOH
37
2
HOH
HOH
37
B
HOH
39
2
HOH
HOH
39
B
HOH
41
2
HOH
HOH
41
B
HOH
42
2
HOH
HOH
42
B
HOH
46
2
HOH
HOH
46
B
HOH
51
2
HOH
HOH
51
B
HOH
52
2
HOH
HOH
52
B
HOH
57
2
HOH
HOH
57
B
HOH
58
2
HOH
HOH
58
B
HOH
60
2
HOH
HOH
60
B
HOH
64
2
HOH
HOH
64
B
HOH
65
2
HOH
HOH
65
B
HOH
66
2
HOH
HOH
66
B
HOH
71
2
HOH
HOH
71
B
HOH
72
2
HOH
HOH
72
B
HOH
73
2
HOH
HOH
73
B
HOH
74
2
HOH
HOH
74
B
HOH
75
2
HOH
HOH
75
B
HOH
78
2
HOH
HOH
78
B
HOH
79
2
HOH
HOH
79
B
HOH
80
2
HOH
HOH
80
B
HOH
81
2
HOH
HOH
81
B
HOH
87
2
HOH
HOH
87
B
HOH
92
2
HOH
HOH
92
B
HOH
93
2
HOH
HOH
93
B
HOH
94
2
HOH
HOH
94
B
C
1
n
1
DC
1
A
G
2
n
2
DG
2
A
C
3
n
3
DC
3
A
A
4
n
4
DA
4
A
A
5
n
5
DA
5
A
A
6
n
6
DA
6
A
T
7
n
7
DT
7
A
T
8
n
8
DT
8
A
T
9
n
9
DT
9
A
G
10
n
10
DG
10
A
C
11
n
11
DC
11
A
G
12
n
12
DG
12
A
C
13
n
1
DC
13
B
G
14
n
2
DG
14
B
C
15
n
3
DC
15
B
A
16
n
4
DA
16
B
A
17
n
5
DA
17
B
A
18
n
6
DA
18
B
T
19
n
7
DT
19
B
T
20
n
8
DT
20
B
T
21
n
9
DT
21
B
G
22
n
10
DG
22
B
C
23
n
11
DC
23
B
G
24
n
12
DG
24
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
B
B
O
O
HOH
HOH
41
80
2.13
1
3.53
0.50
121.00
124.53
A
A
A
C5
C6
N1
DC
DC
DC
1
1
1
N
1
13.67
1.20
119.70
133.37
A
A
A
C3'
O3'
P
DC
DC
DG
1
1
2
Y
1
5.89
0.30
108.30
114.19
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
1
3.32
0.50
111.50
114.82
A
A
A
C5
C6
N1
DG
DG
DG
2
2
2
N
1
13.60
1.20
119.70
133.30
A
A
A
C3'
O3'
P
DG
DG
DC
2
2
3
Y
1
9.03
1.20
110.70
119.73
A
A
A
O5'
P
OP2
DC
DC
DC
3
3
3
N
1
2.59
0.30
108.30
110.89
A
A
A
O4'
C1'
N9
DA
DA
DA
4
4
4
N
1
-3.98
0.50
129.30
125.32
A
A
A
N1
C2
N3
DA
DA
DA
4
4
4
N
1
7.61
1.20
119.70
127.31
A
A
A
C3'
O3'
P
DA
DA
DA
4
4
5
Y
1
-7.64
0.80
109.40
101.76
A
A
A
O5'
C5'
C4'
DA
DA
DA
5
5
5
N
1
-11.43
1.60
120.90
109.47
A
A
A
P
O5'
C5'
DA
DA
DA
5
5
5
N
1
3.42
0.30
108.30
111.72
A
A
A
O4'
C1'
N9
DA
DA
DA
5
5
5
N
1
-4.93
0.50
129.30
124.37
A
A
A
N1
C2
N3
DA
DA
DA
5
5
5
N
1
12.82
1.20
119.70
132.52
A
A
A
C3'
O3'
P
DA
DA
DA
5
5
6
Y
1
-4.68
0.70
108.00
103.32
A
A
A
O4'
C1'
N9
DA
DA
DA
6
6
6
N
1
4.36
0.60
118.60
122.96
A
A
A
C6
N1
C2
DA
DA
DA
6
6
6
N
1
-3.53
0.50
117.70
114.17
A
A
A
C5
C6
N1
DA
DA
DA
6
6
6
N
1
-5.67
0.80
109.40
103.73
A
A
A
O5'
C5'
C4'
DT
DT
DT
7
7
7
N
1
18.78
1.20
119.70
138.48
A
A
A
C3'
O3'
P
DT
DT
DT
7
7
8
Y
1
-4.10
0.60
127.20
123.10
A
A
A
C2
N3
C4
DT
DT
DT
8
8
8
N
1
4.46
0.60
115.20
119.66
A
A
A
N3
C4
C5
DT
DT
DT
8
8
8
N
1
-4.38
0.60
119.90
115.52
A
A
A
N3
C4
O4
DT
DT
DT
8
8
8
N
1
7.31
1.20
119.70
127.01
A
A
A
C3'
O3'
P
DT
DT
DT
8
8
9
Y
1
-5.43
0.60
127.20
121.77
A
A
A
C2
N3
C4
DT
DT
DT
9
9
9
N
1
4.49
0.60
115.20
119.69
A
A
A
N3
C4
C5
DT
DT
DT
9
9
9
N
1
-3.81
0.60
119.90
116.09
A
A
A
N3
C4
O4
DT
DT
DT
9
9
9
N
1
9.89
1.20
119.70
129.59
A
A
A
C3'
O3'
P
DT
DT
DG
9
9
10
Y
1
-5.94
0.80
102.40
96.46
A
A
A
C3'
C2'
C1'
DG
DG
DG
10
10
10
N
1
5.48
0.30
108.30
113.78
A
A
A
O4'
C1'
N9
DG
DG
DG
10
10
10
N
1
11.61
1.20
110.70
122.31
A
A
A
O5'
P
OP2
DC
DC
DC
11
11
11
N
1
-6.21
0.80
109.40
103.19
A
A
A
O5'
C5'
C4'
DC
DC
DC
11
11
11
N
1
-2.81
0.40
121.90
119.09
A
A
A
N3
C4
C5
DC
DC
DC
11
11
11
N
1
6.75
0.70
118.00
124.75
A
A
A
N3
C4
N4
DC
DC
DC
11
11
11
N
1
-4.25
0.70
120.20
115.95
A
A
A
C5
C4
N4
DC
DC
DC
11
11
11
N
1
18.97
1.20
119.70
138.67
A
A
A
C3'
O3'
P
DC
DC
DG
11
11
12
Y
1
-7.35
0.80
109.40
102.05
A
A
A
O5'
C5'
C4'
DG
DG
DG
12
12
12
N
1
-4.69
0.60
128.60
123.91
A
A
A
C5
C6
O6
DG
DG
DG
12
12
12
N
1
6.34
0.30
108.30
114.64
B
B
B
O4'
C1'
N1
DC
DC
DC
13
13
13
N
1
4.51
0.60
118.90
123.41
B
B
B
N1
C2
O2
DC
DC
DC
13
13
13
N
1
-8.52
0.80
109.40
100.88
B
B
B
O5'
C5'
C4'
DG
DG
DG
14
14
14
N
1
-10.33
0.80
109.40
99.07
B
B
B
O5'
C5'
C4'
DC
DC
DC
15
15
15
N
1
14.07
1.20
119.70
133.77
B
B
B
C3'
O3'
P
DC
DC
DA
15
15
16
Y
1
-8.86
0.80
109.40
100.54
B
B
B
O5'
C5'
C4'
DA
DA
DA
16
16
16
N
1
3.53
0.30
108.30
111.83
B
B
B
O4'
C1'
N9
DA
DA
DA
16
16
16
N
1
-5.18
0.50
129.30
124.12
B
B
B
N1
C2
N3
DA
DA
DA
16
16
16
N
1
8.46
1.20
119.70
128.16
B
B
B
C3'
O3'
P
DA
DA
DA
16
16
17
Y
1
12.63
1.20
119.70
132.33
B
B
B
C3'
O3'
P
DA
DA
DA
17
17
18
Y
1
-7.48
0.80
109.40
101.92
B
B
B
O5'
C5'
C4'
DA
DA
DA
18
18
18
N
1
4.15
0.60
118.60
122.75
B
B
B
C6
N1
C2
DA
DA
DA
18
18
18
N
1
-3.61
0.50
129.30
125.69
B
B
B
N1
C2
N3
DA
DA
DA
18
18
18
N
1
-3.73
0.50
117.70
113.97
B
B
B
C5
C6
N1
DA
DA
DA
18
18
18
N
1
19.13
1.20
119.70
138.83
B
B
B
C3'
O3'
P
DA
DA
DT
18
18
19
Y
1
-6.25
1.00
110.10
103.85
B
B
B
C1'
O4'
C4'
DT
DT
DT
19
19
19
N
1
3.36
0.30
108.30
111.66
B
B
B
O4'
C1'
N1
DT
DT
DT
19
19
19
N
1
24.01
1.20
119.70
143.71
B
B
B
C3'
O3'
P
DT
DT
DT
19
19
20
Y
1
-4.16
0.60
127.20
123.04
B
B
B
C2
N3
C4
DT
DT
DT
20
20
20
N
1
4.22
0.60
115.20
119.42
B
B
B
N3
C4
C5
DT
DT
DT
20
20
20
N
1
-6.07
0.80
109.40
103.33
B
B
B
O5'
C5'
C4'
DT
DT
DT
21
21
21
N
1
4.46
0.60
114.60
119.06
B
B
B
N1
C2
N3
DT
DT
DT
21
21
21
N
1
-7.26
0.60
127.20
119.94
B
B
B
C2
N3
C4
DT
DT
DT
21
21
21
N
1
4.41
0.60
115.20
119.61
B
B
B
N3
C4
C5
DT
DT
DT
21
21
21
N
1
-3.81
0.60
122.30
118.49
B
B
B
N3
C2
O2
DT
DT
DT
21
21
21
N
1
10.35
1.20
119.70
130.05
B
B
B
C3'
O3'
P
DT
DT
DG
21
21
22
Y
1
-5.25
0.80
105.90
100.65
B
B
B
O4'
C1'
C2'
DG
DG
DG
22
22
22
N
1
-3.62
0.60
125.10
121.48
B
B
B
C6
N1
C2
DG
DG
DG
22
22
22
N
1
3.69
0.50
111.50
115.19
B
B
B
C5
C6
N1
DG
DG
DG
22
22
22
N
1
12.19
1.20
119.70
131.89
B
B
B
C3'
O3'
P
DG
DG
DC
22
22
23
Y
1
5.31
0.30
108.30
113.61
B
B
B
O4'
C1'
N1
DC
DC
DC
23
23
23
N
1
3.89
0.60
118.90
122.79
B
B
B
N1
C2
O2
DC
DC
DC
23
23
23
N
1
5.35
0.70
118.00
123.35
B
B
B
N3
C4
N4
DC
DC
DC
23
23
23
N
1
3.85
0.30
108.30
112.15
B
B
B
O4'
C1'
N9
DG
DG
DG
24
24
24
N
1
A
A
N3
C4
DC
DC
1
1
0.054
0.007
1.335
1.389
N
1
A
A
N1
C2
DA
DA
4
4
0.063
0.009
1.339
1.402
N
1
A
A
P
O5'
DA
DA
6
6
0.061
0.010
1.593
1.654
N
1
A
A
O3'
C3'
DT
DT
7
7
-0.041
0.006
1.419
1.378
N
1
B
B
C6
N1
DG
DG
24
24
-0.045
0.007
1.391
1.346
N
1
B
A
C4'
O
DG
HOH
24
91
1.73
1_555
2_665
1
B
A
O3'
O
DC
HOH
23
88
1.84
1_555
2_665
1
A
B
O
O
HOH
HOH
59
80
1.93
1_555
1_655
1
A
B
O
O
HOH
HOH
36
37
1.99
1_555
4_467
1
B
A
OP1
O
DG
HOH
24
88
2.10
1_555
2_665
1
A
B
O
O
HOH
HOH
89
41
2.17
1_555
1_655
1
A
A
O
O
HOH
HOH
83
86
2.17
1_555
3_747
1
B
A
O4'
O
DG
HOH
24
91
2.19
1_555
2_665
0.1810000
2.200
8.000
2502
1
2.000
TR
isotropic
TR
isotropic
2.200
8.000
71
557
0
486
0
0.016
0.033
0.033
0.040
fix
fix
2.200
1D65
9704
2943
1
refinement
NUCLSQ
MOLECULAR STRUCTURE OF THE B-DNA DODECAMER D(CGCAAATTTGCG)2; AN EXAMINATION OF PROPELLER TWIST AND MINOR-GROOVE WATER STRUCTURE AT 2.2 ANGSTROMS RESOLUTION
1
N
N
1
N
N
2
N
N
2
N
N
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
B
DG
24
B
N1
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
B
DG
24
B
O6
DG
12
1_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
B
DG
24
B
N2
DG
12
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
B
DC
23
B
N3
DC
11
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
B
DC
23
B
O2
DC
11
1_555
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
B
DC
23
B
N4
DC
11
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N3
DC
3
1_555
B
DG
22
B
N1
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
3
A
N4
DC
3
1_555
B
DG
22
B
O6
DG
10
1_555
hydrog
WATSON-CRICK
A
DC
3
A
O2
DC
3
1_555
B
DG
22
B
N2
DG
10
1_555
hydrog
WATSON-CRICK
A
DA
4
A
N1
DA
4
1_555
B
DT
21
B
N3
DT
9
1_555
hydrog
WATSON-CRICK
A
DA
4
A
N6
DA
4
1_555
B
DT
21
B
O4
DT
9
1_555
hydrog
WATSON-CRICK
A
DA
5
A
N1
DA
5
1_555
B
DT
20
B
N3
DT
8
1_555
hydrog
WATSON-CRICK
A
DA
5
A
N6
DA
5
1_555
B
DT
20
B
O4
DT
8
1_555
hydrog
WATSON-CRICK
A
DA
6
A
N1
DA
6
1_555
B
DT
19
B
N3
DT
7
1_555
hydrog
WATSON-CRICK
A
DA
6
A
N6
DA
6
1_555
B
DT
19
B
O4
DT
7
1_555
hydrog
WATSON-CRICK
A
DT
7
A
N3
DT
7
1_555
B
DA
18
B
N1
DA
6
1_555
hydrog
WATSON-CRICK
A
DT
7
A
O4
DT
7
1_555
B
DA
18
B
N6
DA
6
1_555
hydrog
WATSON-CRICK
A
DT
8
A
N3
DT
8
1_555
B
DA
17
B
N1
DA
5
1_555
hydrog
WATSON-CRICK
A
DT
8
A
O4
DT
8
1_555
B
DA
17
B
N6
DA
5
1_555
hydrog
WATSON-CRICK
A
DT
9
A
N3
DT
9
1_555
B
DA
16
B
N1
DA
4
1_555
hydrog
WATSON-CRICK
A
DT
9
A
O4
DT
9
1_555
B
DA
16
B
N6
DA
4
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N1
DG
10
1_555
B
DC
15
B
N3
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N2
DG
10
1_555
B
DC
15
B
O2
DC
3
1_555
hydrog
WATSON-CRICK
A
DG
10
A
O6
DG
10
1_555
B
DC
15
B
N4
DC
3
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N3
DC
11
1_555
B
DG
14
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
N4
DC
11
1_555
B
DG
14
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
11
A
O2
DC
11
1_555
B
DG
14
B
N2
DG
2
1_555
hydrog
WATSON-CRICK
A
DG
12
A
N1
DG
12
1_555
B
DC
13
B
N3
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
12
A
N2
DG
12
1_555
B
DC
13
B
O2
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
12
A
O6
DG
12
1_555
B
DC
13
B
N4
DC
1
1_555
DNA
B-DNA, DOUBLE HELIX, DNA
1D65
PDB
1
1D65
1
12
1D65
1
12
1D65
A
1
1
12
13
24
1D65
13
24
1D65
B
1
1
12
19
P 21 21 21