21.43
15.381
2.129
9.921
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17.39
14.197
1.574
10.541
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16.30
14.349
1.865
12.025
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15.87
15.492
1.201
12.519
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13.82
14.558
3.330
12.378
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15.74
13.310
4.025
12.464
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15.19
15.261
3.254
13.728
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17.48
16.120
2.019
13.532
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14.03
17.477
2.319
13.029
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17.80
18.002
1.874
11.836
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15.61
19.246
2.246
11.656
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14.57
19.532
3.016
12.778
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17.74
20.715
3.705
13.171
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1
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18.17
21.786
3.739
12.558
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14.63
20.604
4.330
14.379
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1
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15.03
19.474
4.327
15.133
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1
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13.64
19.496
4.988
16.295
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13.88
18.350
3.680
14.827
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13.37
18.453
3.075
13.634
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17.80
13.200
5.621
12.182
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19.94
11.697
5.915
12.331
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15.73
13.719
5.786
10.824
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17.84
13.895
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13.335
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16.14
13.479
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14.725
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15.65
14.479
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15.423
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16.91
15.722
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20.48
14.818
8.609
14.772
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26.76
13.829
9.612
15.023
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16.55
16.164
8.945
15.400
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16.33
16.796
7.576
15.502
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13.58
17.695
7.324
14.356
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15.20
18.992
7.817
14.489
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16.01
19.312
8.405
15.517
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13.24
19.836
7.554
13.453
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1
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14.97
19.452
6.884
12.339
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16.54
20.305
6.685
11.428
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13.32
18.107
6.414
12.205
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16.00
17.690
5.685
10.957
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2
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1
2
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12.41
17.292
6.660
13.233
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2
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26.00
13.743
10.797
13.987
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3
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1
3
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30.70
12.559
11.497
14.568
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3
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1
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19.08
13.851
10.553
12.535
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25.70
15.077
11.769
14.167
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20.70
15.232
12.502
15.400
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18.52
16.692
12.897
15.423
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16.50
17.496
11.746
15.227
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17.160
13.852
14.332
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20.59
16.742
15.191
14.607
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18.676
13.673
14.395
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16.17
18.759
12.180
14.670
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14.76
18.998
11.430
13.430
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12.87
18.130
10.688
12.668
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14.00
18.681
10.130
11.624
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3
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11.53
20.018
10.525
11.711
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3
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1
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12.94
21.144
10.189
10.918
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3
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1
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13.86
21.155
9.508
9.890
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1
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11.64
22.300
10.819
11.326
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1
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13.71
22.386
11.567
12.456
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1
3
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12.35
23.582
12.099
12.762
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1
3
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13.66
21.367
11.892
13.257
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3
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13.41
20.224
11.323
12.810
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3
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1
3
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18.80
16.715
16.348
13.626
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4
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25.95
16.092
17.589
14.317
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4
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1
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16.25
16.240
16.079
12.284
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16.95
18.300
16.768
13.359
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18.55
19.152
17.381
14.356
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17.74
20.521
17.479
13.720
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18.08
21.078
16.191
13.540
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16.96
20.529
18.104
12.331
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21.88
20.428
19.535
12.346
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16.20
21.868
17.611
11.789
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17.88
21.915
16.202
12.362
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16.56
21.437
15.222
11.373
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17.06
22.376
14.681
10.510
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17.07
23.548
15.059
10.533
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15.25
21.931
13.771
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4
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1
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14.73
20.626
13.359
9.529
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4
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1
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14.77
20.324
12.516
8.642
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4
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13.62
19.680
13.945
10.416
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4
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1
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13.81
18.225
13.536
10.353
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4
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1
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17.14
20.122
14.833
11.310
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4
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1
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20.89
20.014
20.308
11.004
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5
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29.41
19.782
21.717
11.530
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5
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1
5
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22.53
18.720
19.742
10.431
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18.58
21.110
20.258
9.905
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15.60
22.391
20.863
10.243
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5
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1
5
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17.24
23.388
20.412
9.207
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1
5
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15.39
23.602
19.017
9.317
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5
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16.98
22.974
20.641
7.763
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19.51
23.201
21.980
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5
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17.64
23.852
19.653
7.001
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5
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1
5
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15.14
23.878
18.504
7.990
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5
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1
5
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14.54
22.856
17.502
7.629
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5
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1
5
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18.11
21.593
17.359
8.147
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5
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1
5
1.00
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16.98
20.939
16.337
7.645
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5
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1
5
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15.07
21.851
15.771
6.758
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5
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1
5
1.00
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14.05
21.768
14.642
5.902
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5
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1
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1
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16.71
20.678
13.875
5.808
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5
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1
5
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16.32
22.876
14.382
5.149
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5
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1
5
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1
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19.43
24.004
15.138
5.212
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5
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1
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16.26
24.127
16.208
5.997
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5
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1
5
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15.63
23.044
16.465
6.742
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5
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1
5
1.00
1
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17.96
22.263
22.585
6.201
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6
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1
6
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22.92
22.656
24.117
6.264
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6
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1
6
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16.85
20.880
22.319
6.593
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6
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1
6
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15.12
22.703
22.036
4.811
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6
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1
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16.33
24.071
22.176
4.356
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6
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1
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18.47
24.350
21.137
3.297
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6
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1
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15.70
24.213
19.846
3.862
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6
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1
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20.26
23.413
21.115
2.096
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6
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1
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20.92
23.665
22.157
1.154
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6
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1
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15.76
23.694
19.714
1.538
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6
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1
6
1.00
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15.37
23.799
18.927
2.826
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6
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A
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1
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1
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14.68
22.520
18.303
3.249
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6
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1
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15.84
22.269
17.040
2.716
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6
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1
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1.00
1
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14.63
23.037
16.544
1.892
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6
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1
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O
14.09
21.087
16.437
3.053
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6
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1
6
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1
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15.41
20.225
16.984
3.956
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6
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1
6
1.00
1
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13.25
19.111
16.309
4.262
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6
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1
6
1.00
1
N
13.07
20.513
18.266
4.505
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6
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1
6
1.00
1
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13.31
21.658
18.866
4.144
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6
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C6
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1
6
1.00
1
C
19.10
22.636
22.722
0.078
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7
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A
P
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1
7
1.00
1
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22.74
23.230
24.086
-0.283
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7
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1
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1.00
1
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18.69
21.254
22.843
0.644
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7
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1
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1.00
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17.74
22.746
21.753
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7
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1
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18.64
24.008
21.272
-1.680
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7
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1
7
1.00
1
C
21.69
23.655
20.207
-2.700
A
C4'
DA
7
ATOM
A
C4'
DA
1
7
1.00
1
C
18.36
23.037
19.132
-2.017
A
O4'
DA
7
ATOM
A
O4'
DA
1
7
1.00
1
O
19.83
22.690
20.636
-3.791
A
C3'
DA
7
ATOM
A
C3'
DA
1
7
1.00
1
C
25.87
23.073
20.129
-5.070
A
O3'
DA
7
ATOM
A
O3'
DA
1
7
1.00
1
O
23.75
21.333
20.090
-3.344
A
C2'
DA
7
ATOM
A
C2'
DA
1
7
1.00
1
C
18.94
21.749
18.838
-2.598
A
C1'
DA
7
ATOM
A
C1'
DA
1
7
1.00
1
C
14.44
20.795
18.507
-1.523
A
N9
DA
7
ATOM
A
N9
DA
1
7
1.00
1
N
15.91
20.432
19.291
-0.463
A
C8
DA
7
ATOM
A
C8
DA
1
7
1.00
1
C
16.13
19.571
18.728
0.345
A
N7
DA
7
ATOM
A
N7
DA
1
7
1.00
1
N
15.47
19.388
17.465
-0.212
A
C5
DA
7
ATOM
A
C5
DA
1
7
1.00
1
C
13.92
18.532
16.404
0.173
A
C6
DA
7
ATOM
A
C6
DA
1
7
1.00
1
C
14.09
17.774
16.423
1.264
A
N6
DA
7
ATOM
A
N6
DA
1
7
1.00
1
N
14.26
18.615
15.303
-0.628
A
N1
DA
7
ATOM
A
N1
DA
1
7
1.00
1
N
13.17
19.386
15.267
-1.750
A
C2
DA
7
ATOM
A
C2
DA
1
7
1.00
1
C
14.85
20.191
16.241
-2.166
A
N3
DA
7
ATOM
A
N3
DA
1
7
1.00
1
N
12.99
20.114
17.322
-1.366
A
C4
DA
7
ATOM
A
C4
DA
1
7
1.00
1
C
34.17
22.319
20.521
-6.413
A
P
DC
8
ATOM
A
P
DC
1
8
1.00
1
P
35.50
23.151
20.213
-7.559
A
OP1
DC
8
ATOM
A
OP1
DC
1
8
1.00
1
O
34.30
21.736
21.885
-6.209
A
OP2
DC
8
ATOM
A
OP2
DC
1
8
1.00
1
O
29.57
21.024
19.471
-6.413
A
O5'
DC
8
ATOM
A
O5'
DC
1
8
1.00
1
O
24.94
21.375
18.123
-6.829
A
C5'
DC
8
ATOM
A
C5'
DC
1
8
1.00
1
C
23.39
20.080
17.365
-6.695
A
C4'
DC
8
ATOM
A
C4'
DC
1
8
1.00
1
C
21.26
19.752
17.328
-5.322
A
O4'
DC
8
ATOM
A
O4'
DC
1
8
1.00
1
O
23.45
18.851
18.003
-7.331
A
C3'
DC
8
ATOM
A
C3'
DC
1
8
1.00
1
C
34.13
18.697
17.726
-8.720
A
O3'
DC
8
ATOM
A
O3'
DC
1
8
1.00
1
O
22.19
17.693
17.398
-6.538
A
C2'
DC
8
ATOM
A
C2'
DC
1
8
1.00
1
C
17.92
18.355
16.947
-5.259
A
C1'
DC
8
ATOM
A
C1'
DC
1
8
1.00
1
C
17.70
17.726
17.561
-4.074
A
N1
DC
8
ATOM
A
N1
DC
1
8
1.00
1
N
15.10
16.841
16.746
-3.391
A
C2
DC
8
ATOM
A
C2
DC
1
8
1.00
1
C
18.62
16.607
15.606
-3.783
A
O2
DC
8
ATOM
A
O2
DC
1
8
1.00
1
O
15.64
16.257
17.230
-2.253
A
N3
DC
8
ATOM
A
N3
DC
1
8
1.00
1
N
14.98
16.484
18.502
-1.821
A
C4
DC
8
ATOM
A
C4
DC
1
8
1.00
1
C
14.59
15.895
18.933
-0.706
A
N4
DC
8
ATOM
A
N4
DC
1
8
1.00
1
N
17.38
17.399
19.331
-2.535
A
C5
DC
8
ATOM
A
C5
DC
1
8
1.00
1
C
14.89
17.963
18.829
-3.642
A
C6
DC
8
ATOM
A
C6
DC
1
8
1.00
1
C
34.85
18.316
20.140
2.174
A
O
HOH
9
HETATM
B
O
HOH
2
0.96
1
O
44.32
19.171
22.708
-1.078
A
O
HOH
10
HETATM
B
O
HOH
2
1.00
1
O
32.75
14.773
4.532
8.909
A
O
HOH
11
HETATM
B
O
HOH
2
0.99
1
O
55.36
15.103
12.105
10.500
A
O
HOH
12
HETATM
B
O
HOH
2
0.82
1
O
27.44
14.764
8.536
10.547
A
O
HOH
13
HETATM
B
O
HOH
2
0.95
1
O
27.97
17.248
17.448
10.154
A
O
HOH
14
HETATM
B
O
HOH
2
0.96
1
O
26.62
17.225
9.213
9.723
A
O
HOH
15
HETATM
B
O
HOH
2
1.00
1
O
26.38
22.295
13.387
15.423
A
O
HOH
16
HETATM
B
O
HOH
2
0.97
1
O
50.61
20.457
24.475
10.139
A
O
HOH
17
HETATM
B
O
HOH
2
0.94
1
O
41.91
20.247
24.340
2.376
A
O
HOH
18
HETATM
B
O
HOH
2
0.92
1
O
51.76
23.264
26.570
7.438
A
O
HOH
19
HETATM
B
O
HOH
2
1.00
1
O
49.38
24.106
10.940
-3.611
A
O
HOH
20
HETATM
B
O
HOH
2
0.94
1
O
26.58
21.661
14.861
-4.081
A
O
HOH
21
HETATM
B
O
HOH
2
1.00
1
O
36.56
17.470
18.322
6.216
A
O
HOH
22
HETATM
B
O
HOH
2
0.85
1
O
53.87
19.603
8.988
8.077
A
O
HOH
23
HETATM
B
O
HOH
2
0.96
1
O
30.26
18.175
11.321
7.912
A
O
HOH
24
HETATM
B
O
HOH
2
0.96
1
O
32.42
19.087
21.886
4.040
A
O
HOH
25
HETATM
B
O
HOH
2
1.00
1
O
37.96
16.906
2.535
17.040
A
O
HOH
26
HETATM
B
O
HOH
2
1.00
1
O
26.14
18.224
16.378
7.690
A
O
HOH
27
HETATM
B
O
HOH
2
0.94
1
O
38.73
17.166
14.194
6.758
A
O
HOH
28
HETATM
B
O
HOH
2
0.85
1
O
46.79
16.713
18.748
3.493
A
O
HOH
29
HETATM
B
O
HOH
2
0.91
1
O
29.11
26.503
17.745
4.825
A
O
HOH
30
HETATM
B
O
HOH
2
0.89
1
O
51.07
10.690
7.385
15.806
A
O
HOH
31
HETATM
B
O
HOH
2
0.68
1
O
36.98
9.723
6.886
13.537
A
O
HOH
32
HETATM
B
O
HOH
2
0.87
1
O
52.65
10.295
9.408
12.590
A
O
HOH
33
HETATM
B
O
HOH
2
1.00
1
O
28.23
27.398
20.462
4.743
A
O
HOH
34
HETATM
B
O
HOH
2
0.97
1
O
34.91
16.775
21.683
0.133
A
O
HOH
35
HETATM
B
O
HOH
2
0.93
1
O
49.21
17.674
14.972
-9.154
A
O
HOH
36
HETATM
B
O
HOH
2
0.73
1
O
32.32
18.781
20.291
7.551
A
O
HOH
37
HETATM
B
O
HOH
2
0.86
1
O
40.70
20.979
5.657
9.220
A
O
HOH
38
HETATM
B
O
HOH
2
0.93
1
O
57.93
22.845
28.105
5.348
A
O
HOH
39
HETATM
B
O
HOH
2
0.90
1
O
52.46
20.576
20.000
6.036
A
O
HOH
40
HETATM
B
O
HOH
2
0.59
1
O
54.44
10.999
17.874
3.297
A
O
HOH
41
HETATM
B
O
HOH
2
0.74
1
O
35.29
22.641
25.823
4.340
A
O
HOH
42
HETATM
B
O
HOH
2
0.96
1
O
62.70
15.935
20.193
13.349
A
O
HOH
43
HETATM
B
O
HOH
2
0.95
1
O
0.030921
0.017852
0.000000
0.000000
0.035605
0.000000
0.000000
0.000000
0.012740
0.00000
0.00000
0.00000
Thota, N.
Li, X.H.
Bingman, C.A.
Sundaralingam, M.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
32.341
32.341
78.490
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
DK
Acta Crystallogr.,Sect.D
ABCRE6
0766
0907-4449
49
282
291
10.1107/S0907444992007522
15299533
High-resolution refinement of the hexagonal A-DNA octamer d(GTGTACAC) at 1.4 A.
1993
US
Biochemistry
BICHAW
0033
0006-2960
30
3567
3576
Hexagonal Crystal Structure of the A-DNA Octamer d(GTGTACAC) and Its Comparison with the Tetragonal Structure: Correlated Variations in Helical Parameters
1991
10.2210/pdb1d79/pdb
pdb_00001d79
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
258.00
1
AREA DETECTOR
XENTRONICS
x-ray
1
1.0
2426.617
DNA (5'-D(*GP*TP*GP*TP*AP*CP*AP*C)-3')
1
syn
polymer
18.015
water
35
nat
water
no
no
(DG)(DT)(DG)(DT)(DA)(DC)(DA)(DC)
GTGTACAC
A
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
2.44
49.62
VAPOR DIFFUSION
VAPOR DIFFUSION, temperature 283.00K
283.00
WATER
1
MPD
1
MGCL2
1
SPERMIDINE
1
WATER
2
MPD
2
MGCL2
2
-14.935
1
19
A
1
A
8
-0.365
A_DG1:DC8_A
1
-19.194
-0.303
-0.233
-0.179
-18.067
1
20
A
2
A
7
-3.144
A_DT2:DA7_A
2
-8.707
-0.004
-0.071
-0.125
-8.232
1
19
A
3
A
6
0.751
A_DG3:DC6_A
3
-13.305
-0.163
0.032
-0.166
-1.880
1
20
A
4
A
5
-2.352
A_DT4:DA5_A
4
-12.140
0.005
0.167
-0.223
1.888
1
20
A
5
A
4
-2.319
A_DA5:DT4_A
5
-12.144
-0.010
0.167
-0.219
8.219
1
19
A
6
A
3
0.779
A_DC6:DG3_A
6
-13.310
0.161
0.032
-0.157
18.026
1
20
A
7
A
2
-3.126
A_DA7:DT2_A
7
-8.691
0.008
-0.070
-0.120
14.908
1
19
A
8
A
1
-0.345
A_DC8:DG1_A
8
-19.151
0.308
-0.232
-0.179
3.407
36.196
A
A
1
2
-2.191
A
A
8
7
3.394
-1.361
-0.644
-1.347
AA_DG1DT2:DA7DC8_AA
1
1.737
-2.797
36.131
-1.969
1.291
2.442
31.517
A
A
2
3
24.426
A
A
7
6
3.150
12.887
0.690
-0.986
AA_DT2DG3:DC6DA7_AA
2
-2.030
3.847
28.752
-3.968
-1.610
2.954
33.406
A
A
3
4
10.402
A
A
6
5
3.177
5.947
-0.583
-1.150
AA_DG3DT4:DA5DC6_AA
3
-1.660
2.904
32.847
-2.930
0.754
2.445
33.485
A
A
4
5
23.250
A
A
5
4
3.112
13.059
-0.002
-1.138
AA_DT4DA5:DT4DA5_AA
4
-0.005
0.009
30.901
-3.882
0.002
2.953
33.387
A
A
5
6
10.411
A
A
4
3
3.176
5.949
0.575
-1.147
AA_DA5DC6:DG3DT4_AA
5
1.655
-2.897
32.827
-2.929
-0.742
2.441
31.514
A
A
6
7
24.430
A
A
3
2
3.148
12.888
-0.695
-0.982
AA_DC6DA7:DT2DG3_AA
6
2.027
-3.842
28.749
-3.961
1.619
3.404
36.194
A
A
7
8
-2.190
A
A
2
1
3.391
-1.360
0.643
-1.339
AA_DA7DC8:DG1DT2_AA
7
-1.737
2.798
36.129
-1.957
-1.288
audit_author
citation_author
database_2
repository
Initial release
Version format compliance
Version format compliance
Database references
Structure summary
1
0
1993-04-15
1
1
2008-05-22
1
2
2011-07-13
1
3
2023-03-22
_audit_author.name
_citation_author.name
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
BNL
Y
NDB
1992-06-12
REL
REL
HOH
water
HOH
9
2
HOH
HOH
9
A
HOH
10
2
HOH
HOH
10
A
HOH
11
2
HOH
HOH
11
A
HOH
12
2
HOH
HOH
12
A
HOH
13
2
HOH
HOH
13
A
HOH
14
2
HOH
HOH
14
A
HOH
15
2
HOH
HOH
15
A
HOH
16
2
HOH
HOH
16
A
HOH
17
2
HOH
HOH
17
A
HOH
18
2
HOH
HOH
18
A
HOH
19
2
HOH
HOH
19
A
HOH
20
2
HOH
HOH
20
A
HOH
21
2
HOH
HOH
21
A
HOH
22
2
HOH
HOH
22
A
HOH
23
2
HOH
HOH
23
A
HOH
24
2
HOH
HOH
24
A
HOH
25
2
HOH
HOH
25
A
HOH
26
2
HOH
HOH
26
A
HOH
27
2
HOH
HOH
27
A
HOH
28
2
HOH
HOH
28
A
HOH
29
2
HOH
HOH
29
A
HOH
30
2
HOH
HOH
30
A
HOH
31
2
HOH
HOH
31
A
HOH
32
2
HOH
HOH
32
A
HOH
33
2
HOH
HOH
33
A
HOH
34
2
HOH
HOH
34
A
HOH
35
2
HOH
HOH
35
A
HOH
36
2
HOH
HOH
36
A
HOH
37
2
HOH
HOH
37
A
HOH
38
2
HOH
HOH
38
A
HOH
39
2
HOH
HOH
39
A
HOH
40
2
HOH
HOH
40
A
HOH
41
2
HOH
HOH
41
A
HOH
42
2
HOH
HOH
42
A
HOH
43
2
HOH
HOH
43
A
G
1
n
1
DG
1
A
T
2
n
2
DT
2
A
G
3
n
3
DG
3
A
T
4
n
4
DT
4
A
A
5
n
5
DA
5
A
C
6
n
6
DC
6
A
A
7
n
7
DA
7
A
C
8
n
8
DC
8
A
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
0.4986097458
0.8652107365
0.0000000000
0.8684454431
-0.4986097458
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
12_555
x,x-y,-z+1/6
crystal symmetry operation
0.0000000000
0.0000000000
13.0821559393
1
7.37
1.20
110.70
118.07
A
A
A
O5'
P
OP2
DT
DT
DT
2
2
2
N
1
-5.35
0.80
109.40
104.05
A
A
A
O5'
C5'
C4'
DT
DT
DT
2
2
2
N
1
-4.17
0.60
127.20
123.03
A
A
A
C2
N3
C4
DT
DT
DT
2
2
2
N
1
5.17
0.60
115.20
120.37
A
A
A
N3
C4
C5
DT
DT
DT
2
2
2
N
1
10.71
1.10
110.50
121.21
A
A
A
O3'
P
OP2
DT
DG
DG
2
3
3
Y
1
-7.39
0.90
105.70
98.31
A
A
A
O5'
P
OP2
DG
DG
DG
3
3
3
N
1
-4.96
0.80
109.40
104.44
A
A
A
O5'
C5'
C4'
DG
DG
DG
3
3
3
N
1
7.09
1.10
110.50
117.59
A
A
A
O3'
P
OP2
DG
DT
DT
3
4
4
Y
1
2.46
0.30
108.30
110.76
A
A
A
O4'
C1'
N1
DT
DT
DT
4
4
4
N
1
-4.49
0.60
127.20
122.71
A
A
A
C2
N3
C4
DT
DT
DT
4
4
4
N
1
-9.46
1.50
119.60
110.14
A
A
A
OP1
P
OP2
DA
DA
DA
5
5
5
N
1
4.23
0.60
118.60
122.83
A
A
A
C6
N1
C2
DA
DA
DA
5
5
5
N
1
-5.91
0.50
129.30
123.39
A
A
A
N1
C2
N3
DA
DA
DA
5
5
5
N
1
3.42
0.50
110.60
114.02
A
A
A
C2
N3
C4
DA
DA
DA
5
5
5
N
1
-2.64
0.40
121.90
119.26
A
A
A
N3
C4
C5
DC
DC
DC
6
6
6
N
1
4.05
0.60
118.60
122.65
A
A
A
C6
N1
C2
DA
DA
DA
7
7
7
N
1
-3.79
0.50
129.30
125.51
A
A
A
N1
C2
N3
DA
DA
DA
7
7
7
N
1
-3.61
0.50
117.70
114.09
A
A
A
C5
C6
N1
DA
DA
DA
7
7
7
N
1
-5.89
0.80
109.40
103.51
A
A
A
O5'
C5'
C4'
DC
DC
DC
8
8
8
N
1
-2.51
0.40
121.90
119.39
A
A
A
N3
C4
C5
DC
DC
DC
8
8
8
N
1
A
A
P
O5'
DG
DG
3
3
0.067
0.010
1.593
1.660
N
1
A
A
O3'
P
DG
DT
3
4
-0.090
0.012
1.607
1.517
Y
1
A
A
P
O5'
DT
DT
4
4
0.068
0.010
1.593
1.661
N
1
A
A
P
O5'
DC
DC
8
8
0.074
0.010
1.593
1.667
N
0.1910000
1.450
5.000
3292
1
2.000
TR
isotropic
TR
isotropic
1.450
5.000
35
196
0
161
0
0.004
0.043
fix
fix
1.450
5.000
1D79
6017
3292
2.000
1
refinement
NUCLSQ
HIGH RESOLUTION REFINEMENT OF THE HEXAGONAL A-DNA OCTAMER D(GTGTACAC) AT 1.4 ANGSTROMS RESOLUTION
1
N
N
2
N
N
hydrog
WATSON-CRICK
A
DG
1
A
N1
DG
1
1_555
A
DC
8
A
N3
DC
8
12_555
hydrog
WATSON-CRICK
A
DG
1
A
N2
DG
1
1_555
A
DC
8
A
O2
DC
8
12_555
hydrog
WATSON-CRICK
A
DG
1
A
O6
DG
1
1_555
A
DC
8
A
N4
DC
8
12_555
hydrog
WATSON-CRICK
A
DT
2
A
N3
DT
2
1_555
A
DA
7
A
N1
DA
7
12_555
hydrog
WATSON-CRICK
A
DT
2
A
O4
DT
2
1_555
A
DA
7
A
N6
DA
7
12_555
hydrog
WATSON-CRICK
A
DG
3
A
N1
DG
3
1_555
A
DC
6
A
N3
DC
6
12_555
hydrog
WATSON-CRICK
A
DG
3
A
N2
DG
3
1_555
A
DC
6
A
O2
DC
6
12_555
hydrog
WATSON-CRICK
A
DG
3
A
O6
DG
3
1_555
A
DC
6
A
N4
DC
6
12_555
hydrog
WATSON-CRICK
A
DT
4
A
N3
DT
4
1_555
A
DA
5
A
N1
DA
5
12_555
hydrog
WATSON-CRICK
A
DT
4
A
O4
DT
4
1_555
A
DA
5
A
N6
DA
5
12_555
hydrog
WATSON-CRICK
A
DA
5
A
N1
DA
5
1_555
A
DT
4
A
N3
DT
4
12_555
hydrog
WATSON-CRICK
A
DA
5
A
N6
DA
5
1_555
A
DT
4
A
O4
DT
4
12_555
hydrog
WATSON-CRICK
A
DC
6
A
N3
DC
6
1_555
A
DG
3
A
N1
DG
3
12_555
hydrog
WATSON-CRICK
A
DC
6
A
N4
DC
6
1_555
A
DG
3
A
O6
DG
3
12_555
hydrog
WATSON-CRICK
A
DC
6
A
O2
DC
6
1_555
A
DG
3
A
N2
DG
3
12_555
hydrog
WATSON-CRICK
A
DA
7
A
N1
DA
7
1_555
A
DT
2
A
N3
DT
2
12_555
hydrog
WATSON-CRICK
A
DA
7
A
N6
DA
7
1_555
A
DT
2
A
O4
DT
2
12_555
hydrog
WATSON-CRICK
A
DC
8
A
N3
DC
8
1_555
A
DG
1
A
N1
DG
1
12_555
hydrog
WATSON-CRICK
A
DC
8
A
N4
DC
8
1_555
A
DG
1
A
O6
DG
1
12_555
hydrog
WATSON-CRICK
A
DC
8
A
O2
DC
8
1_555
A
DG
1
A
N2
DG
1
12_555
DNA
A-DNA, DOUBLE HELIX, DNA
1D79
PDB
1
1D79
1
8
1D79
1
8
1D79
A
1
1
8
178
P 61 2 2