data_1D82 # _entry.id 1D82 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.385 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 1D82 pdb_00001d82 10.2210/pdb1d82/pdb RCSB ADH041 ? ? WWPDB D_1000172680 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 1992-10-15 2 'Structure model' 1 1 2008-05-22 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2024-02-07 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 1D82 _pdbx_database_status.recvd_initial_deposition_date 1992-06-29 _pdbx_database_status.deposit_site BNL _pdbx_database_status.process_site NDB _pdbx_database_status.SG_entry . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Cervi, A.' 1 ;Langlois D'Estaintot, B. ; 2 'Hunter, W.N.' 3 # _citation.id primary _citation.title 'Crystal and Molecular Structure of d(GTCTAGAC)' _citation.journal_abbrev 'Acta Crystallogr.,Sect.B' _citation.journal_volume 48 _citation.page_first 714 _citation.page_last 719 _citation.year 1992 _citation.journal_id_ASTM ASBSDK _citation.country DK _citation.journal_id_ISSN 0108-7681 _citation.journal_id_CSD 0622 _citation.book_publisher ? _citation.pdbx_database_id_PubMed -1 _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cervi, A.' 1 ? primary ;Langlois D'Estaintot, B. ; 2 ? primary 'Hunter, W.N.' 3 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;DNA (5'-D(*GP*TP*CP*TP*AP*GP*AP*C)-3') ; 2426.617 1 ? ? ? ? 2 water nat water 18.015 3 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polydeoxyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code '(DG)(DT)(DC)(DT)(DA)(DG)(DA)(DC)' _entity_poly.pdbx_seq_one_letter_code_can GTCTAGAC _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DT n 1 3 DC n 1 4 DT n 1 5 DA n 1 6 DG n 1 7 DA n 1 8 DC n # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 HOH non-polymer . WATER ? 'H2 O' 18.015 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG G A . n A 1 2 DT 2 2 2 DT T A . n A 1 3 DC 3 3 3 DC C A . n A 1 4 DT 4 4 4 DT T A . n A 1 5 DA 5 5 5 DA A A . n A 1 6 DG 6 6 6 DG G A . n A 1 7 DA 7 7 7 DA A A . n A 1 8 DC 8 8 8 DC C A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 9 9 HOH HOH A . B 2 HOH 2 10 10 HOH HOH A . B 2 HOH 3 11 11 HOH HOH A . # _software.name NUCLSQ _software.classification refinement _software.version . _software.citation_id ? _software.pdbx_ordinal 1 # _cell.entry_id 1D82 _cell.length_a 42.560 _cell.length_b 42.560 _cell.length_c 24.610 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 1D82 _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _exptl.entry_id 1D82 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_percent_sol 46.43 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 295.00 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.80 _exptl_crystal_grow.pdbx_details 'pH 6.80, VAPOR DIFFUSION, temperature 295.00K' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _exptl_crystal_grow_comp.crystal_id _exptl_crystal_grow_comp.id _exptl_crystal_grow_comp.sol_id _exptl_crystal_grow_comp.name _exptl_crystal_grow_comp.volume _exptl_crystal_grow_comp.conc _exptl_crystal_grow_comp.details 1 1 1 WATER ? ? ? 1 2 1 MPD ? ? ? 1 3 1 'NA CACODYLATE' ? ? ? 1 4 1 MGCL2 ? ? ? 1 5 1 SPERMINE_HCL ? ? ? 1 6 2 WATER ? ? ? 1 7 2 MPD ? ? ? # _diffrn.id 1 _diffrn.ambient_temp 295.00 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector DIFFRACTOMETER _diffrn_detector.type 'RIGAKU AFC-5' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l ? _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU RU200' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 1D82 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F 1.000 _reflns.d_resolution_low ? _reflns.d_resolution_high 2.500 _reflns.number_obs 1757 _reflns.number_all 1861 _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.entry_id 1D82 _refine.ls_number_reflns_obs 801 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 6.000 _refine.ls_d_res_high 2.500 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.2110000 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work ? _refine.ls_R_factor_R_free ? _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 161 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 3 _refine_hist.number_atoms_total 164 _refine_hist.d_res_high 2.500 _refine_hist.d_res_low 6.000 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function n_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_planar_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_hb_or_metal_coord ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_it 0.011 ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_angle_it 0.023 ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_it 0.031 ? ? ? 'X-RAY DIFFRACTION' ? n_phos_angle_it 0.044 ? ? ? 'X-RAY DIFFRACTION' ? n_bond_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_dihedral_angle_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_impr_tor ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_sugar_bond_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_phos_bond_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? n_plane_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_chiral_restr ? ? ? ? 'X-RAY DIFFRACTION' ? n_singtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? n_multtor_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? n_xhyhbond_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 1D82 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 1D82 _struct.title 'CRYSTAL AND MOLECULAR STRUCTURE OF D(GTCTAGAC)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 1D82 _struct_keywords.pdbx_keywords DNA _struct_keywords.text 'A-DNA, DOUBLE HELIX, DNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.entity_id 1 _struct_ref.db_name PDB _struct_ref.db_code 1D82 _struct_ref.pdbx_db_accession 1D82 _struct_ref.pdbx_db_isoform ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 1D82 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 8 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 1D82 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 8 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 8 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 7_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 A DC 8 N3 ? ? A DG 1 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 A DC 8 O2 ? ? A DG 1 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 A DC 8 N4 ? ? A DG 1 A DC 8 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DT 2 N3 ? ? ? 1_555 A DA 7 N1 ? ? A DT 2 A DA 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DT 2 O4 ? ? ? 1_555 A DA 7 N6 ? ? A DT 2 A DA 7 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 3 N3 ? ? ? 1_555 A DG 6 N1 ? ? A DC 3 A DG 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DC 3 N4 ? ? ? 1_555 A DG 6 O6 ? ? A DC 3 A DG 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DC 3 O2 ? ? ? 1_555 A DG 6 N2 ? ? A DC 3 A DG 6 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DT 4 N3 ? ? ? 1_555 A DA 5 N1 ? ? A DT 4 A DA 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DT 4 O4 ? ? ? 1_555 A DA 5 N6 ? ? A DT 4 A DA 5 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DA 5 N1 ? ? ? 1_555 A DT 4 N3 ? ? A DA 5 A DT 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DA 5 N6 ? ? ? 1_555 A DT 4 O4 ? ? A DA 5 A DT 4 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 6 N1 ? ? ? 1_555 A DC 3 N3 ? ? A DG 6 A DC 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 6 N2 ? ? ? 1_555 A DC 3 O2 ? ? A DG 6 A DC 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 6 O6 ? ? ? 1_555 A DC 3 N4 ? ? A DG 6 A DC 3 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DA 7 N1 ? ? ? 1_555 A DT 2 N3 ? ? A DA 7 A DT 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DA 7 N6 ? ? ? 1_555 A DT 2 O4 ? ? A DA 7 A DT 2 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DC 8 N3 ? ? ? 1_555 A DG 1 N1 ? ? A DC 8 A DG 1 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DC 8 N4 ? ? ? 1_555 A DG 1 O6 ? ? A DC 8 A DG 1 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DC 8 O2 ? ? ? 1_555 A DG 1 N2 ? ? A DC 8 A DG 1 7_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 "C5'" A DT 2 ? ? 1_555 O A HOH 11 ? ? 3_544 1.67 2 1 "C4'" A DT 2 ? ? 1_555 O A HOH 11 ? ? 3_544 1.76 3 1 "O4'" A DT 2 ? ? 1_555 O A HOH 11 ? ? 3_544 2.02 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DG 1 ? ? "C1'" A DG 1 ? ? N9 A DG 1 ? ? 110.92 108.30 2.62 0.30 N 2 1 "O5'" A DT 2 ? ? P A DT 2 ? ? OP1 A DT 2 ? ? 119.95 110.70 9.25 1.20 N 3 1 "O5'" A DT 2 ? ? P A DT 2 ? ? OP2 A DT 2 ? ? 117.90 110.70 7.20 1.20 N 4 1 "O4'" A DT 2 ? ? "C1'" A DT 2 ? ? N1 A DT 2 ? ? 110.94 108.30 2.64 0.30 N 5 1 C2 A DT 2 ? ? N3 A DT 2 ? ? C4 A DT 2 ? ? 122.33 127.20 -4.87 0.60 N 6 1 N3 A DT 2 ? ? C4 A DT 2 ? ? C5 A DT 2 ? ? 119.35 115.20 4.15 0.60 N 7 1 N3 A DT 2 ? ? C4 A DT 2 ? ? O4 A DT 2 ? ? 116.19 119.90 -3.71 0.60 N 8 1 P A DC 3 ? ? "O5'" A DC 3 ? ? "C5'" A DC 3 ? ? 108.80 120.90 -12.10 1.60 N 9 1 "O4'" A DC 3 ? ? "C1'" A DC 3 ? ? N1 A DC 3 ? ? 111.31 108.30 3.01 0.30 N 10 1 C2 A DT 4 ? ? N3 A DT 4 ? ? C4 A DT 4 ? ? 122.42 127.20 -4.78 0.60 N 11 1 N3 A DT 4 ? ? C4 A DT 4 ? ? C5 A DT 4 ? ? 119.61 115.20 4.41 0.60 N 12 1 "O5'" A DA 5 ? ? "C5'" A DA 5 ? ? "C4'" A DA 5 ? ? 102.11 109.40 -7.29 0.80 N 13 1 P A DA 5 ? ? "O5'" A DA 5 ? ? "C5'" A DA 5 ? ? 106.91 120.90 -13.99 1.60 N 14 1 "O4'" A DA 5 ? ? "C1'" A DA 5 ? ? N9 A DA 5 ? ? 113.13 108.30 4.83 0.30 N 15 1 "O4'" A DG 6 ? ? "C1'" A DG 6 ? ? N9 A DG 6 ? ? 103.72 108.00 -4.28 0.70 N 16 1 "C3'" A DG 6 ? ? "O3'" A DG 6 ? ? P A DA 7 ? ? 110.76 119.70 -8.94 1.20 Y 17 1 N1 A DA 7 ? ? C2 A DA 7 ? ? N3 A DA 7 ? ? 125.98 129.30 -3.32 0.50 N 18 1 "C3'" A DA 7 ? ? "O3'" A DA 7 ? ? P A DC 8 ? ? 130.17 119.70 10.47 1.20 Y 19 1 "O5'" A DC 8 ? ? "C5'" A DC 8 ? ? "C4'" A DC 8 ? ? 101.16 109.40 -8.24 0.80 N 20 1 "O4'" A DC 8 ? ? "C1'" A DC 8 ? ? N1 A DC 8 ? ? 110.38 108.30 2.08 0.30 N # loop_ _refine_B_iso.class _refine_B_iso.details _refine_B_iso.treatment _refine_B_iso.pdbx_refine_id 'ALL ATOMS' TR isotropic 'X-RAY DIFFRACTION' 'ALL WATERS' TR isotropic 'X-RAY DIFFRACTION' # loop_ _refine_occupancy.class _refine_occupancy.treatment _refine_occupancy.pdbx_refine_id 'ALL ATOMS' fix 'X-RAY DIFFRACTION' 'ALL WATERS' fix 'X-RAY DIFFRACTION' # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal DA OP3 O N N 1 DA P P N N 2 DA OP1 O N N 3 DA OP2 O N N 4 DA "O5'" O N N 5 DA "C5'" C N N 6 DA "C4'" C N R 7 DA "O4'" O N N 8 DA "C3'" C N S 9 DA "O3'" O N N 10 DA "C2'" C N N 11 DA "C1'" C N R 12 DA N9 N Y N 13 DA C8 C Y N 14 DA N7 N Y N 15 DA C5 C Y N 16 DA C6 C Y N 17 DA N6 N N N 18 DA N1 N Y N 19 DA C2 C Y N 20 DA N3 N Y N 21 DA C4 C Y N 22 DA HOP3 H N N 23 DA HOP2 H N N 24 DA "H5'" H N N 25 DA "H5''" H N N 26 DA "H4'" H N N 27 DA "H3'" H N N 28 DA "HO3'" H N N 29 DA "H2'" H N N 30 DA "H2''" H N N 31 DA "H1'" H N N 32 DA H8 H N N 33 DA H61 H N N 34 DA H62 H N N 35 DA H2 H N N 36 DC OP3 O N N 37 DC P P N N 38 DC OP1 O N N 39 DC OP2 O N N 40 DC "O5'" O N N 41 DC "C5'" C N N 42 DC "C4'" C N R 43 DC "O4'" O N N 44 DC "C3'" C N S 45 DC "O3'" O N N 46 DC "C2'" C N N 47 DC "C1'" C N R 48 DC N1 N N N 49 DC C2 C N N 50 DC O2 O N N 51 DC N3 N N N 52 DC C4 C N N 53 DC N4 N N N 54 DC C5 C N N 55 DC C6 C N N 56 DC HOP3 H N N 57 DC HOP2 H N N 58 DC "H5'" H N N 59 DC "H5''" H N N 60 DC "H4'" H N N 61 DC "H3'" H N N 62 DC "HO3'" H N N 63 DC "H2'" H N N 64 DC "H2''" H N N 65 DC "H1'" H N N 66 DC H41 H N N 67 DC H42 H N N 68 DC H5 H N N 69 DC H6 H N N 70 DG OP3 O N N 71 DG P P N N 72 DG OP1 O N N 73 DG OP2 O N N 74 DG "O5'" O N N 75 DG "C5'" C N N 76 DG "C4'" C N R 77 DG "O4'" O N N 78 DG "C3'" C N S 79 DG "O3'" O N N 80 DG "C2'" C N N 81 DG "C1'" C N R 82 DG N9 N Y N 83 DG C8 C Y N 84 DG N7 N Y N 85 DG C5 C Y N 86 DG C6 C N N 87 DG O6 O N N 88 DG N1 N N N 89 DG C2 C N N 90 DG N2 N N N 91 DG N3 N N N 92 DG C4 C Y N 93 DG HOP3 H N N 94 DG HOP2 H N N 95 DG "H5'" H N N 96 DG "H5''" H N N 97 DG "H4'" H N N 98 DG "H3'" H N N 99 DG "HO3'" H N N 100 DG "H2'" H N N 101 DG "H2''" H N N 102 DG "H1'" H N N 103 DG H8 H N N 104 DG H1 H N N 105 DG H21 H N N 106 DG H22 H N N 107 DT OP3 O N N 108 DT P P N N 109 DT OP1 O N N 110 DT OP2 O N N 111 DT "O5'" O N N 112 DT "C5'" C N N 113 DT "C4'" C N R 114 DT "O4'" O N N 115 DT "C3'" C N S 116 DT "O3'" O N N 117 DT "C2'" C N N 118 DT "C1'" C N R 119 DT N1 N N N 120 DT C2 C N N 121 DT O2 O N N 122 DT N3 N N N 123 DT C4 C N N 124 DT O4 O N N 125 DT C5 C N N 126 DT C7 C N N 127 DT C6 C N N 128 DT HOP3 H N N 129 DT HOP2 H N N 130 DT "H5'" H N N 131 DT "H5''" H N N 132 DT "H4'" H N N 133 DT "H3'" H N N 134 DT "HO3'" H N N 135 DT "H2'" H N N 136 DT "H2''" H N N 137 DT "H1'" H N N 138 DT H3 H N N 139 DT H71 H N N 140 DT H72 H N N 141 DT H73 H N N 142 DT H6 H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal DA OP3 P sing N N 1 DA OP3 HOP3 sing N N 2 DA P OP1 doub N N 3 DA P OP2 sing N N 4 DA P "O5'" sing N N 5 DA OP2 HOP2 sing N N 6 DA "O5'" "C5'" sing N N 7 DA "C5'" "C4'" sing N N 8 DA "C5'" "H5'" sing N N 9 DA "C5'" "H5''" sing N N 10 DA "C4'" "O4'" sing N N 11 DA "C4'" "C3'" sing N N 12 DA "C4'" "H4'" sing N N 13 DA "O4'" "C1'" sing N N 14 DA "C3'" "O3'" sing N N 15 DA "C3'" "C2'" sing N N 16 DA "C3'" "H3'" sing N N 17 DA "O3'" "HO3'" sing N N 18 DA "C2'" "C1'" sing N N 19 DA "C2'" "H2'" sing N N 20 DA "C2'" "H2''" sing N N 21 DA "C1'" N9 sing N N 22 DA "C1'" "H1'" sing N N 23 DA N9 C8 sing Y N 24 DA N9 C4 sing Y N 25 DA C8 N7 doub Y N 26 DA C8 H8 sing N N 27 DA N7 C5 sing Y N 28 DA C5 C6 sing Y N 29 DA C5 C4 doub Y N 30 DA C6 N6 sing N N 31 DA C6 N1 doub Y N 32 DA N6 H61 sing N N 33 DA N6 H62 sing N N 34 DA N1 C2 sing Y N 35 DA C2 N3 doub Y N 36 DA C2 H2 sing N N 37 DA N3 C4 sing Y N 38 DC OP3 P sing N N 39 DC OP3 HOP3 sing N N 40 DC P OP1 doub N N 41 DC P OP2 sing N N 42 DC P "O5'" sing N N 43 DC OP2 HOP2 sing N N 44 DC "O5'" "C5'" sing N N 45 DC "C5'" "C4'" sing N N 46 DC "C5'" "H5'" sing N N 47 DC "C5'" "H5''" sing N N 48 DC "C4'" "O4'" sing N N 49 DC "C4'" "C3'" sing N N 50 DC "C4'" "H4'" sing N N 51 DC "O4'" "C1'" sing N N 52 DC "C3'" "O3'" sing N N 53 DC "C3'" "C2'" sing N N 54 DC "C3'" "H3'" sing N N 55 DC "O3'" "HO3'" sing N N 56 DC "C2'" "C1'" sing N N 57 DC "C2'" "H2'" sing N N 58 DC "C2'" "H2''" sing N N 59 DC "C1'" N1 sing N N 60 DC "C1'" "H1'" sing N N 61 DC N1 C2 sing N N 62 DC N1 C6 sing N N 63 DC C2 O2 doub N N 64 DC C2 N3 sing N N 65 DC N3 C4 doub N N 66 DC C4 N4 sing N N 67 DC C4 C5 sing N N 68 DC N4 H41 sing N N 69 DC N4 H42 sing N N 70 DC C5 C6 doub N N 71 DC C5 H5 sing N N 72 DC C6 H6 sing N N 73 DG OP3 P sing N N 74 DG OP3 HOP3 sing N N 75 DG P OP1 doub N N 76 DG P OP2 sing N N 77 DG P "O5'" sing N N 78 DG OP2 HOP2 sing N N 79 DG "O5'" "C5'" sing N N 80 DG "C5'" "C4'" sing N N 81 DG "C5'" "H5'" sing N N 82 DG "C5'" "H5''" sing N N 83 DG "C4'" "O4'" sing N N 84 DG "C4'" "C3'" sing N N 85 DG "C4'" "H4'" sing N N 86 DG "O4'" "C1'" sing N N 87 DG "C3'" "O3'" sing N N 88 DG "C3'" "C2'" sing N N 89 DG "C3'" "H3'" sing N N 90 DG "O3'" "HO3'" sing N N 91 DG "C2'" "C1'" sing N N 92 DG "C2'" "H2'" sing N N 93 DG "C2'" "H2''" sing N N 94 DG "C1'" N9 sing N N 95 DG "C1'" "H1'" sing N N 96 DG N9 C8 sing Y N 97 DG N9 C4 sing Y N 98 DG C8 N7 doub Y N 99 DG C8 H8 sing N N 100 DG N7 C5 sing Y N 101 DG C5 C6 sing N N 102 DG C5 C4 doub Y N 103 DG C6 O6 doub N N 104 DG C6 N1 sing N N 105 DG N1 C2 sing N N 106 DG N1 H1 sing N N 107 DG C2 N2 sing N N 108 DG C2 N3 doub N N 109 DG N2 H21 sing N N 110 DG N2 H22 sing N N 111 DG N3 C4 sing N N 112 DT OP3 P sing N N 113 DT OP3 HOP3 sing N N 114 DT P OP1 doub N N 115 DT P OP2 sing N N 116 DT P "O5'" sing N N 117 DT OP2 HOP2 sing N N 118 DT "O5'" "C5'" sing N N 119 DT "C5'" "C4'" sing N N 120 DT "C5'" "H5'" sing N N 121 DT "C5'" "H5''" sing N N 122 DT "C4'" "O4'" sing N N 123 DT "C4'" "C3'" sing N N 124 DT "C4'" "H4'" sing N N 125 DT "O4'" "C1'" sing N N 126 DT "C3'" "O3'" sing N N 127 DT "C3'" "C2'" sing N N 128 DT "C3'" "H3'" sing N N 129 DT "O3'" "HO3'" sing N N 130 DT "C2'" "C1'" sing N N 131 DT "C2'" "H2'" sing N N 132 DT "C2'" "H2''" sing N N 133 DT "C1'" N1 sing N N 134 DT "C1'" "H1'" sing N N 135 DT N1 C2 sing N N 136 DT N1 C6 sing N N 137 DT C2 O2 doub N N 138 DT C2 N3 sing N N 139 DT N3 C4 sing N N 140 DT N3 H3 sing N N 141 DT C4 O4 doub N N 142 DT C4 C5 sing N N 143 DT C5 C7 sing N N 144 DT C5 C6 doub N N 145 DT C7 H71 sing N N 146 DT C7 H72 sing N N 147 DT C7 H73 sing N N 148 DT C6 H6 sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 # _ndb_struct_conf_na.entry_id 1D82 _ndb_struct_conf_na.feature 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 A DC 8 7_555 -1.032 -0.142 -0.233 -8.200 -10.434 5.107 1 A_DG1:DC8_A A 1 ? A 8 ? 19 1 1 A DT 2 1_555 A DA 7 7_555 -0.098 -0.094 -0.271 10.717 -13.048 3.672 2 A_DT2:DA7_A A 2 ? A 7 ? 20 1 1 A DC 3 1_555 A DG 6 7_555 0.640 -0.349 0.039 1.366 -8.921 7.368 3 A_DC3:DG6_A A 3 ? A 6 ? 19 1 1 A DT 4 1_555 A DA 5 7_555 0.098 -0.111 0.347 -2.409 -11.731 -5.261 4 A_DT4:DA5_A A 4 ? A 5 ? 20 1 1 A DA 5 1_555 A DT 4 7_555 -0.098 -0.111 0.347 2.409 -11.731 -5.261 5 A_DA5:DT4_A A 5 ? A 4 ? 20 1 1 A DG 6 1_555 A DC 3 7_555 -0.640 -0.349 0.039 -1.366 -8.921 7.368 6 A_DG6:DC3_A A 6 ? A 3 ? 19 1 1 A DA 7 1_555 A DT 2 7_555 0.098 -0.094 -0.271 -10.717 -13.048 3.672 7 A_DA7:DT2_A A 7 ? A 2 ? 20 1 1 A DC 8 1_555 A DG 1 7_555 1.032 -0.142 -0.233 8.200 -10.434 5.107 8 A_DC8:DG1_A A 8 ? A 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 A DC 8 7_555 A DT 2 1_555 A DA 7 7_555 0.624 -0.887 2.900 -1.513 11.670 36.597 -2.580 -1.109 2.486 18.020 2.337 38.381 1 AA_DG1DT2:DA7DC8_AA A 1 ? A 8 ? A 2 ? A 7 ? 1 A DT 2 1_555 A DA 7 7_555 A DC 3 1_555 A DG 6 7_555 0.061 -1.301 3.598 0.190 11.502 37.433 -3.389 -0.068 3.081 17.424 -0.288 39.100 2 AA_DT2DC3:DG6DA7_AA A 2 ? A 7 ? A 3 ? A 6 ? 1 A DC 3 1_555 A DG 6 7_555 A DT 4 1_555 A DA 5 7_555 -0.317 -1.570 3.363 -0.512 2.511 32.258 -3.265 0.477 3.239 4.510 0.919 32.357 3 AA_DC3DT4:DA5DG6_AA A 3 ? A 6 ? A 4 ? A 5 ? 1 A DT 4 1_555 A DA 5 7_555 A DA 5 1_555 A DT 4 7_555 0.000 -1.665 3.184 0.000 6.159 23.841 -5.628 0.000 2.675 14.598 0.000 24.613 4 AA_DT4DA5:DT4DA5_AA A 4 ? A 5 ? A 5 ? A 4 ? 1 A DA 5 1_555 A DT 4 7_555 A DG 6 1_555 A DC 3 7_555 0.317 -1.570 3.363 0.512 2.511 32.258 -3.265 -0.477 3.239 4.510 -0.919 32.357 5 AA_DA5DG6:DC3DT4_AA A 5 ? A 4 ? A 6 ? A 3 ? 1 A DG 6 1_555 A DC 3 7_555 A DA 7 1_555 A DT 2 7_555 -0.061 -1.301 3.598 -0.190 11.502 37.433 -3.389 0.068 3.081 17.424 0.288 39.100 6 AA_DG6DA7:DT2DC3_AA A 6 ? A 3 ? A 7 ? A 2 ? 1 A DA 7 1_555 A DT 2 7_555 A DC 8 1_555 A DG 1 7_555 -0.624 -0.887 2.900 1.513 11.670 36.597 -2.580 1.109 2.486 18.020 -2.337 38.381 7 AA_DA7DC8:DG1DT2_AA A 7 ? A 2 ? A 8 ? A 1 ? # _atom_sites.entry_id 1D82 _atom_sites.fract_transf_matrix[1][1] 0.023496 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023496 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.040634 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_alt_id _atom_site.label_comp_id _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.label_seq_id _atom_site.pdbx_PDB_ins_code _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_seq_id _atom_site.auth_comp_id _atom_site.auth_asym_id _atom_site.auth_atom_id _atom_site.pdbx_PDB_model_num ATOM 1 O "O5'" . DG A 1 1 ? 7.231 -2.196 -5.399 1.00 22.25 ? 1 DG A "O5'" 1 ATOM 2 C "C5'" . DG A 1 1 ? 6.950 -3.464 -4.723 1.00 15.86 ? 1 DG A "C5'" 1 ATOM 3 C "C4'" . DG A 1 1 ? 8.299 -4.018 -4.302 1.00 15.20 ? 1 DG A "C4'" 1 ATOM 4 O "O4'" . DG A 1 1 ? 9.257 -3.779 -5.318 1.00 10.85 ? 1 DG A "O4'" 1 ATOM 5 C "C3'" . DG A 1 1 ? 8.912 -3.354 -3.074 1.00 15.62 ? 1 DG A "C3'" 1 ATOM 6 O "O3'" . DG A 1 1 ? 8.397 -3.826 -1.833 1.00 20.67 ? 1 DG A "O3'" 1 ATOM 7 C "C2'" . DG A 1 1 ? 10.385 -3.707 -3.244 1.00 12.71 ? 1 DG A "C2'" 1 ATOM 8 C "C1'" . DG A 1 1 ? 10.538 -3.558 -4.728 1.00 7.78 ? 1 DG A "C1'" 1 ATOM 9 N N9 . DG A 1 1 ? 11.032 -2.213 -5.038 1.00 5.96 ? 1 DG A N9 1 ATOM 10 C C8 . DG A 1 1 ? 10.432 -1.200 -5.709 1.00 5.64 ? 1 DG A C8 1 ATOM 11 N N7 . DG A 1 1 ? 11.206 -0.153 -5.904 1.00 6.81 ? 1 DG A N7 1 ATOM 12 C C5 . DG A 1 1 ? 12.419 -0.515 -5.331 1.00 8.61 ? 1 DG A C5 1 ATOM 13 C C6 . DG A 1 1 ? 13.658 0.170 -5.193 1.00 8.05 ? 1 DG A C6 1 ATOM 14 O O6 . DG A 1 1 ? 13.934 1.328 -5.562 1.00 11.41 ? 1 DG A O6 1 ATOM 15 N N1 . DG A 1 1 ? 14.628 -0.540 -4.543 1.00 7.19 ? 1 DG A N1 1 ATOM 16 C C2 . DG A 1 1 ? 14.419 -1.813 -4.100 1.00 5.46 ? 1 DG A C2 1 ATOM 17 N N2 . DG A 1 1 ? 15.466 -2.434 -3.532 1.00 10.14 ? 1 DG A N2 1 ATOM 18 N N3 . DG A 1 1 ? 13.296 -2.481 -4.196 1.00 5.15 ? 1 DG A N3 1 ATOM 19 C C4 . DG A 1 1 ? 12.330 -1.788 -4.809 1.00 8.28 ? 1 DG A C4 1 ATOM 20 P P . DT A 1 2 ? 7.699 -2.741 -0.810 1.00 19.59 ? 2 DT A P 1 ATOM 21 O OP1 . DT A 1 2 ? 6.588 -3.545 -0.207 1.00 20.41 ? 2 DT A OP1 1 ATOM 22 O OP2 . DT A 1 2 ? 7.159 -1.711 -1.757 1.00 18.85 ? 2 DT A OP2 1 ATOM 23 O "O5'" . DT A 1 2 ? 8.933 -2.362 0.047 1.00 14.20 ? 2 DT A "O5'" 1 ATOM 24 C "C5'" . DT A 1 2 ? 9.636 -3.349 0.820 1.00 18.12 ? 2 DT A "C5'" 1 ATOM 25 C "C4'" . DT A 1 2 ? 11.049 -2.839 0.982 1.00 17.74 ? 2 DT A "C4'" 1 ATOM 26 O "O4'" . DT A 1 2 ? 11.615 -2.545 -0.283 1.00 17.74 ? 2 DT A "O4'" 1 ATOM 27 C "C3'" . DT A 1 2 ? 11.176 -1.528 1.745 1.00 19.12 ? 2 DT A "C3'" 1 ATOM 28 O "O3'" . DT A 1 2 ? 11.070 -1.673 3.152 1.00 22.36 ? 2 DT A "O3'" 1 ATOM 29 C "C2'" . DT A 1 2 ? 12.585 -1.081 1.307 1.00 17.85 ? 2 DT A "C2'" 1 ATOM 30 C "C1'" . DT A 1 2 ? 12.606 -1.507 -0.128 1.00 12.64 ? 2 DT A "C1'" 1 ATOM 31 N N1 . DT A 1 2 ? 12.308 -0.353 -1.012 1.00 9.55 ? 2 DT A N1 1 ATOM 32 C C2 . DT A 1 2 ? 13.411 0.413 -1.363 1.00 7.45 ? 2 DT A C2 1 ATOM 33 O O2 . DT A 1 2 ? 14.530 0.162 -0.925 1.00 8.22 ? 2 DT A O2 1 ATOM 34 N N3 . DT A 1 2 ? 13.206 1.451 -2.217 1.00 8.01 ? 2 DT A N3 1 ATOM 35 C C4 . DT A 1 2 ? 11.985 1.728 -2.744 1.00 7.67 ? 2 DT A C4 1 ATOM 36 O O4 . DT A 1 2 ? 11.930 2.715 -3.546 1.00 10.46 ? 2 DT A O4 1 ATOM 37 C C5 . DT A 1 2 ? 10.878 0.902 -2.409 1.00 3.98 ? 2 DT A C5 1 ATOM 38 C C7 . DT A 1 2 ? 9.516 1.217 -2.978 1.00 3.03 ? 2 DT A C7 1 ATOM 39 C C6 . DT A 1 2 ? 11.091 -0.102 -1.563 1.00 5.06 ? 2 DT A C6 1 ATOM 40 P P . DC A 1 3 ? 10.321 -0.536 3.970 1.00 28.15 ? 3 DC A P 1 ATOM 41 O OP1 . DC A 1 3 ? 9.389 -1.196 4.922 1.00 29.35 ? 3 DC A OP1 1 ATOM 42 O OP2 . DC A 1 3 ? 9.682 0.255 2.867 1.00 27.97 ? 3 DC A OP2 1 ATOM 43 O "O5'" . DC A 1 3 ? 11.483 0.260 4.710 1.00 22.68 ? 3 DC A "O5'" 1 ATOM 44 C "C5'" . DC A 1 3 ? 12.402 0.758 3.726 1.00 24.92 ? 3 DC A "C5'" 1 ATOM 45 C "C4'" . DC A 1 3 ? 13.581 1.388 4.420 1.00 23.08 ? 3 DC A "C4'" 1 ATOM 46 O "O4'" . DC A 1 3 ? 14.560 1.558 3.404 1.00 27.27 ? 3 DC A "O4'" 1 ATOM 47 C "C3'" . DC A 1 3 ? 13.343 2.737 5.038 1.00 23.43 ? 3 DC A "C3'" 1 ATOM 48 O "O3'" . DC A 1 3 ? 13.572 2.758 6.463 1.00 25.54 ? 3 DC A "O3'" 1 ATOM 49 C "C2'" . DC A 1 3 ? 14.321 3.686 4.356 1.00 25.72 ? 3 DC A "C2'" 1 ATOM 50 C "C1'" . DC A 1 3 ? 14.696 2.945 3.098 1.00 22.89 ? 3 DC A "C1'" 1 ATOM 51 N N1 . DC A 1 3 ? 13.785 3.345 2.018 1.00 20.44 ? 3 DC A N1 1 ATOM 52 C C2 . DC A 1 3 ? 14.211 4.401 1.228 1.00 19.82 ? 3 DC A C2 1 ATOM 53 O O2 . DC A 1 3 ? 15.296 4.924 1.457 1.00 19.34 ? 3 DC A O2 1 ATOM 54 N N3 . DC A 1 3 ? 13.381 4.797 0.226 1.00 20.88 ? 3 DC A N3 1 ATOM 55 C C4 . DC A 1 3 ? 12.159 4.218 0.015 1.00 22.27 ? 3 DC A C4 1 ATOM 56 N N4 . DC A 1 3 ? 11.380 4.652 -0.987 1.00 21.02 ? 3 DC A N4 1 ATOM 57 C C5 . DC A 1 3 ? 11.738 3.145 0.847 1.00 22.07 ? 3 DC A C5 1 ATOM 58 C C6 . DC A 1 3 ? 12.581 2.749 1.819 1.00 20.93 ? 3 DC A C6 1 ATOM 59 P P . DT A 1 4 ? 13.249 4.145 7.228 1.00 26.13 ? 4 DT A P 1 ATOM 60 O OP1 . DT A 1 4 ? 13.504 3.907 8.673 1.00 32.53 ? 4 DT A OP1 1 ATOM 61 O OP2 . DT A 1 4 ? 11.785 4.341 6.832 1.00 25.37 ? 4 DT A OP2 1 ATOM 62 O "O5'" . DT A 1 4 ? 14.194 5.248 6.662 1.00 17.95 ? 4 DT A "O5'" 1 ATOM 63 C "C5'" . DT A 1 4 ? 15.607 5.380 6.834 1.00 15.14 ? 4 DT A "C5'" 1 ATOM 64 C "C4'" . DT A 1 4 ? 15.973 6.673 6.116 1.00 15.44 ? 4 DT A "C4'" 1 ATOM 65 O "O4'" . DT A 1 4 ? 15.700 6.524 4.745 1.00 16.75 ? 4 DT A "O4'" 1 ATOM 66 C "C3'" . DT A 1 4 ? 15.173 7.899 6.524 1.00 14.00 ? 4 DT A "C3'" 1 ATOM 67 O "O3'" . DT A 1 4 ? 15.645 8.491 7.720 1.00 18.73 ? 4 DT A "O3'" 1 ATOM 68 C "C2'" . DT A 1 4 ? 15.360 8.814 5.326 1.00 15.19 ? 4 DT A "C2'" 1 ATOM 69 C "C1'" . DT A 1 4 ? 15.428 7.848 4.189 1.00 15.15 ? 4 DT A "C1'" 1 ATOM 70 N N1 . DT A 1 4 ? 14.160 7.776 3.450 1.00 13.97 ? 4 DT A N1 1 ATOM 71 C C2 . DT A 1 4 ? 13.990 8.644 2.390 1.00 13.15 ? 4 DT A C2 1 ATOM 72 O O2 . DT A 1 4 ? 14.858 9.470 2.156 1.00 13.53 ? 4 DT A O2 1 ATOM 73 N N3 . DT A 1 4 ? 12.832 8.538 1.666 1.00 11.60 ? 4 DT A N3 1 ATOM 74 C C4 . DT A 1 4 ? 11.870 7.622 1.959 1.00 11.54 ? 4 DT A C4 1 ATOM 75 O O4 . DT A 1 4 ? 10.840 7.610 1.211 1.00 13.43 ? 4 DT A O4 1 ATOM 76 C C5 . DT A 1 4 ? 12.061 6.725 3.049 1.00 12.09 ? 4 DT A C5 1 ATOM 77 C C7 . DT A 1 4 ? 11.053 5.677 3.416 1.00 7.58 ? 4 DT A C7 1 ATOM 78 C C6 . DT A 1 4 ? 13.211 6.827 3.743 1.00 14.34 ? 4 DT A C6 1 ATOM 79 P P . DA A 1 5 ? 14.790 9.516 8.579 1.00 27.61 ? 5 DA A P 1 ATOM 80 O OP1 . DA A 1 5 ? 15.309 9.627 9.977 1.00 22.02 ? 5 DA A OP1 1 ATOM 81 O OP2 . DA A 1 5 ? 13.338 9.227 8.330 1.00 14.47 ? 5 DA A OP2 1 ATOM 82 O "O5'" . DA A 1 5 ? 15.181 10.942 7.875 1.00 19.11 ? 5 DA A "O5'" 1 ATOM 83 C "C5'" . DA A 1 5 ? 13.921 11.619 7.555 1.00 12.04 ? 5 DA A "C5'" 1 ATOM 84 C "C4'" . DA A 1 5 ? 14.364 12.649 6.531 1.00 11.89 ? 5 DA A "C4'" 1 ATOM 85 O "O4'" . DA A 1 5 ? 14.560 12.019 5.296 1.00 12.02 ? 5 DA A "O4'" 1 ATOM 86 C "C3'" . DA A 1 5 ? 13.325 13.734 6.322 1.00 11.99 ? 5 DA A "C3'" 1 ATOM 87 O "O3'" . DA A 1 5 ? 13.606 14.841 7.166 1.00 18.44 ? 5 DA A "O3'" 1 ATOM 88 C "C2'" . DA A 1 5 ? 13.474 14.066 4.853 1.00 12.81 ? 5 DA A "C2'" 1 ATOM 89 C "C1'" . DA A 1 5 ? 13.879 12.725 4.267 1.00 8.63 ? 5 DA A "C1'" 1 ATOM 90 N N9 . DA A 1 5 ? 12.670 12.040 3.802 1.00 6.64 ? 5 DA A N9 1 ATOM 91 C C8 . DA A 1 5 ? 12.040 10.955 4.317 1.00 4.88 ? 5 DA A C8 1 ATOM 92 N N7 . DA A 1 5 ? 10.964 10.606 3.647 1.00 7.15 ? 5 DA A N7 1 ATOM 93 C C5 . DA A 1 5 ? 10.912 11.517 2.589 1.00 5.96 ? 5 DA A C5 1 ATOM 94 C C6 . DA A 1 5 ? 10.002 11.653 1.511 1.00 6.23 ? 5 DA A C6 1 ATOM 95 N N6 . DA A 1 5 ? 8.980 10.832 1.294 1.00 5.89 ? 5 DA A N6 1 ATOM 96 N N1 . DA A 1 5 ? 10.274 12.674 0.657 1.00 3.00 ? 5 DA A N1 1 ATOM 97 C C2 . DA A 1 5 ? 11.359 13.474 0.844 1.00 7.72 ? 5 DA A C2 1 ATOM 98 N N3 . DA A 1 5 ? 12.262 13.402 1.824 1.00 4.19 ? 5 DA A N3 1 ATOM 99 C C4 . DA A 1 5 ? 11.968 12.394 2.660 1.00 5.64 ? 5 DA A C4 1 ATOM 100 P P . DG A 1 6 ? 12.487 15.964 7.442 1.00 12.38 ? 6 DG A P 1 ATOM 101 O OP1 . DG A 1 6 ? 13.121 16.811 8.453 1.00 19.19 ? 6 DG A OP1 1 ATOM 102 O OP2 . DG A 1 6 ? 11.321 15.168 7.816 1.00 19.23 ? 6 DG A OP2 1 ATOM 103 O "O5'" . DG A 1 6 ? 12.381 16.573 5.970 1.00 17.14 ? 6 DG A "O5'" 1 ATOM 104 C "C5'" . DG A 1 6 ? 12.708 17.952 5.680 1.00 15.41 ? 6 DG A "C5'" 1 ATOM 105 C "C4'" . DG A 1 6 ? 12.142 18.250 4.314 1.00 13.87 ? 6 DG A "C4'" 1 ATOM 106 O "O4'" . DG A 1 6 ? 11.998 17.028 3.598 1.00 13.41 ? 6 DG A "O4'" 1 ATOM 107 C "C3'" . DG A 1 6 ? 10.746 18.846 4.258 1.00 14.92 ? 6 DG A "C3'" 1 ATOM 108 O "O3'" . DG A 1 6 ? 10.683 20.233 4.560 1.00 13.67 ? 6 DG A "O3'" 1 ATOM 109 C "C2'" . DG A 1 6 ? 10.355 18.586 2.793 1.00 10.87 ? 6 DG A "C2'" 1 ATOM 110 C "C1'" . DG A 1 6 ? 10.981 17.250 2.577 1.00 10.44 ? 6 DG A "C1'" 1 ATOM 111 N N9 . DG A 1 6 ? 10.040 16.152 2.781 1.00 8.54 ? 6 DG A N9 1 ATOM 112 C C8 . DG A 1 6 ? 10.155 15.245 3.797 1.00 9.12 ? 6 DG A C8 1 ATOM 113 N N7 . DG A 1 6 ? 9.240 14.296 3.731 1.00 13.90 ? 6 DG A N7 1 ATOM 114 C C5 . DG A 1 6 ? 8.495 14.619 2.601 1.00 8.41 ? 6 DG A C5 1 ATOM 115 C C6 . DG A 1 6 ? 7.363 13.994 2.030 1.00 9.70 ? 6 DG A C6 1 ATOM 116 O O6 . DG A 1 6 ? 6.780 12.981 2.451 1.00 10.74 ? 6 DG A O6 1 ATOM 117 N N1 . DG A 1 6 ? 6.903 14.632 0.896 1.00 9.85 ? 6 DG A N1 1 ATOM 118 C C2 . DG A 1 6 ? 7.482 15.752 0.396 1.00 3.88 ? 6 DG A C2 1 ATOM 119 N N2 . DG A 1 6 ? 6.899 16.258 -0.684 1.00 7.71 ? 6 DG A N2 1 ATOM 120 N N3 . DG A 1 6 ? 8.546 16.369 0.898 1.00 6.92 ? 6 DG A N3 1 ATOM 121 C C4 . DG A 1 6 ? 8.989 15.760 2.013 1.00 8.28 ? 6 DG A C4 1 ATOM 122 P P . DA A 1 7 ? 9.504 20.535 5.636 1.00 11.52 ? 7 DA A P 1 ATOM 123 O OP1 . DA A 1 7 ? 9.929 21.884 6.128 1.00 18.21 ? 7 DA A OP1 1 ATOM 124 O OP2 . DA A 1 7 ? 9.529 19.437 6.534 1.00 11.92 ? 7 DA A OP2 1 ATOM 125 O "O5'" . DA A 1 7 ? 8.201 20.586 4.673 1.00 8.91 ? 7 DA A "O5'" 1 ATOM 126 C "C5'" . DA A 1 7 ? 8.342 21.586 3.620 1.00 6.45 ? 7 DA A "C5'" 1 ATOM 127 C "C4'" . DA A 1 7 ? 7.248 21.318 2.626 1.00 3.39 ? 7 DA A "C4'" 1 ATOM 128 O "O4'" . DA A 1 7 ? 7.376 20.033 2.057 1.00 5.79 ? 7 DA A "O4'" 1 ATOM 129 C "C3'" . DA A 1 7 ? 5.844 21.323 3.231 1.00 3.85 ? 7 DA A "C3'" 1 ATOM 130 O "O3'" . DA A 1 7 ? 5.439 22.642 3.445 1.00 7.81 ? 7 DA A "O3'" 1 ATOM 131 C "C2'" . DA A 1 7 ? 5.069 20.565 2.156 1.00 5.70 ? 7 DA A "C2'" 1 ATOM 132 C "C1'" . DA A 1 7 ? 6.056 19.527 1.752 1.00 3.87 ? 7 DA A "C1'" 1 ATOM 133 N N9 . DA A 1 7 ? 5.895 18.301 2.540 1.00 4.66 ? 7 DA A N9 1 ATOM 134 C C8 . DA A 1 7 ? 6.707 17.875 3.561 1.00 6.62 ? 7 DA A C8 1 ATOM 135 N N7 . DA A 1 7 ? 6.324 16.743 4.112 1.00 2.28 ? 7 DA A N7 1 ATOM 136 C C5 . DA A 1 7 ? 5.218 16.381 3.349 1.00 1.74 ? 7 DA A C5 1 ATOM 137 C C6 . DA A 1 7 ? 4.379 15.258 3.413 1.00 4.78 ? 7 DA A C6 1 ATOM 138 N N6 . DA A 1 7 ? 4.550 14.283 4.297 1.00 9.36 ? 7 DA A N6 1 ATOM 139 N N1 . DA A 1 7 ? 3.362 15.241 2.513 1.00 5.07 ? 7 DA A N1 1 ATOM 140 C C2 . DA A 1 7 ? 3.171 16.249 1.632 1.00 4.94 ? 7 DA A C2 1 ATOM 141 N N3 . DA A 1 7 ? 3.911 17.365 1.538 1.00 4.89 ? 7 DA A N3 1 ATOM 142 C C4 . DA A 1 7 ? 4.933 17.339 2.404 1.00 4.26 ? 7 DA A C4 1 ATOM 143 P P . DC A 1 8 ? 4.209 23.208 4.243 1.00 14.05 ? 8 DC A P 1 ATOM 144 O OP1 . DC A 1 8 ? 4.494 24.749 4.243 1.00 18.27 ? 8 DC A OP1 1 ATOM 145 O OP2 . DC A 1 8 ? 4.294 22.557 5.545 1.00 16.14 ? 8 DC A OP2 1 ATOM 146 O "O5'" . DC A 1 8 ? 2.932 22.914 3.421 1.00 10.49 ? 8 DC A "O5'" 1 ATOM 147 C "C5'" . DC A 1 8 ? 2.749 21.642 2.712 1.00 14.57 ? 8 DC A "C5'" 1 ATOM 148 C "C4'" . DC A 1 8 ? 1.349 21.825 2.134 1.00 15.98 ? 8 DC A "C4'" 1 ATOM 149 O "O4'" . DC A 1 8 ? 0.689 20.633 1.831 1.00 17.74 ? 8 DC A "O4'" 1 ATOM 150 C "C3'" . DC A 1 8 ? 0.468 22.544 3.162 1.00 15.68 ? 8 DC A "C3'" 1 ATOM 151 O "O3'" . DC A 1 8 ? -0.208 23.621 2.486 1.00 23.46 ? 8 DC A "O3'" 1 ATOM 152 C "C2'" . DC A 1 8 ? -0.375 21.450 3.741 1.00 14.98 ? 8 DC A "C2'" 1 ATOM 153 C "C1'" . DC A 1 8 ? -0.021 20.191 3.007 1.00 13.74 ? 8 DC A "C1'" 1 ATOM 154 N N1 . DC A 1 8 ? 0.834 19.292 3.819 1.00 14.40 ? 8 DC A N1 1 ATOM 155 C C2 . DC A 1 8 ? 0.464 17.960 3.871 1.00 13.07 ? 8 DC A C2 1 ATOM 156 O O2 . DC A 1 8 ? -0.540 17.539 3.305 1.00 14.67 ? 8 DC A O2 1 ATOM 157 N N3 . DC A 1 8 ? 1.243 17.096 4.580 1.00 12.98 ? 8 DC A N3 1 ATOM 158 C C4 . DC A 1 8 ? 2.332 17.535 5.274 1.00 13.43 ? 8 DC A C4 1 ATOM 159 N N4 . DC A 1 8 ? 3.000 16.637 5.997 1.00 12.91 ? 8 DC A N4 1 ATOM 160 C C5 . DC A 1 8 ? 2.707 18.909 5.212 1.00 12.96 ? 8 DC A C5 1 ATOM 161 C C6 . DC A 1 8 ? 1.945 19.735 4.489 1.00 10.13 ? 8 DC A C6 1 HETATM 162 O O . HOH B 2 . ? 14.585 15.313 1.617 1.00 14.98 ? 9 HOH A O 1 HETATM 163 O O . HOH B 2 . ? 14.594 0.902 9.098 1.00 22.76 ? 10 HOH A O 1 HETATM 164 O O . HOH B 2 . ? 16.943 10.508 6.253 1.00 57.46 ? 11 HOH A O 1 #