0.031511
0.000000
0.015985
0.000000
0.038906
0.000000
0.000000
0.000000
0.032773
0.000000
0.000000
0.000000
Kielkopf, C.L.
Ding, S.
Kuhn, P.
Rees, D.C.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
4
90.00
116.90
90.00
31.735
25.703
34.215
Ca 2
40.078
CALCIUM ION
non-polymer
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
N
1
N
CA
N
2
N
O
N
3
N
P
N
4
N
O
N
5
N
O
N
6
N
O
N
7
N
C
N
8
R
C
N
9
N
O
N
10
S
C
N
11
N
O
N
12
N
C
N
13
R
C
Y
14
N
N
Y
15
N
C
Y
16
N
N
Y
17
N
C
Y
18
N
C
N
19
N
N
Y
20
N
N
Y
21
N
C
Y
22
N
N
Y
23
N
C
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
O
N
39
N
P
N
40
N
O
N
41
N
O
N
42
N
O
N
43
N
C
N
44
R
C
N
45
N
O
N
46
S
C
N
47
N
O
N
48
N
C
N
49
R
C
N
50
N
N
N
51
N
C
N
52
N
O
N
53
N
N
N
54
N
C
N
55
N
N
N
56
N
C
N
57
N
C
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
O
N
73
N
P
N
74
N
O
N
75
N
O
N
76
N
O
N
77
N
C
N
78
R
C
N
79
N
O
N
80
S
C
N
81
N
O
N
82
N
C
N
83
R
C
Y
84
N
N
Y
85
N
C
Y
86
N
N
Y
87
N
C
N
88
N
C
N
89
N
O
N
90
N
N
N
91
N
C
N
92
N
N
N
93
N
N
Y
94
N
C
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
H
N
109
N
O
N
110
N
P
N
111
N
O
N
112
N
O
N
113
N
O
N
114
N
C
N
115
R
C
N
116
N
O
N
117
S
C
N
118
N
O
N
119
N
C
N
120
R
C
N
121
N
N
N
122
N
C
N
123
N
O
N
124
N
N
N
125
N
C
N
126
N
O
N
127
N
C
N
128
N
C
N
129
N
C
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
H
N
142
N
H
N
143
N
H
N
144
N
H
N
145
N
O
N
146
N
H
N
147
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
Y
24
N
sing
Y
25
N
sing
Y
26
N
doub
N
27
N
sing
Y
28
N
sing
Y
29
N
sing
Y
30
N
doub
N
31
N
sing
Y
32
N
doub
N
33
N
sing
N
34
N
sing
Y
35
N
sing
Y
36
N
doub
N
37
N
sing
Y
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
doub
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
sing
N
62
N
sing
N
63
N
sing
N
64
N
doub
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
Y
97
N
sing
Y
98
N
sing
Y
99
N
doub
N
100
N
sing
Y
101
N
sing
N
102
N
sing
Y
103
N
doub
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
doub
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
doub
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
sing
N
136
N
sing
N
137
N
sing
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
doub
N
143
N
sing
N
144
N
sing
N
145
N
doub
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
296
787
801
10.1006/jmbi.1999.3478
10677281
Conformational flexibility of B-DNA at 0.74 A resolution: d(CCAGTACTGG)(2).
2000
10.2210/pdb1d8g/pdb
pdb_00001d8g
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
100.0
1
100.0
1
100.0
1
IMAGE PLATE
RIGAKU RAXIS IV
DOUBLE FOCUSSING MIRRORS
IMAGE PLATE
MARRESEARCH
DOUBLE FOCUSSING MIRRORS
IMAGE PLATE
MARRESEARCH
SINGLE WAVELENGTH
M
x-ray
1
SINGLE WAVELENGTH
M
x-ray
1
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
0.9800
1.0
0.7800
1.0
1.5418
ROTATING ANODE
RIGAKU
BL9-1
SSRL
0.9800
SYNCHROTRON
SSRL BEAMLINE BL9-1
BL9-1
SSRL
0.7800
SYNCHROTRON
SSRL BEAMLINE BL9-1
3045.004
5'-D(*CP*CP*AP*GP*TP*AP*CP*TP*GP*GP*)-3'
1
syn
polymer
40.078
CALCIUM ION
4
syn
non-polymer
18.015
water
119
nat
water
no
no
(DC)(DC)(DA)(DG)(DT)(DA)(DC)(DT)(DG)(DG)
CCAGTACTGG
A
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
3
2.04
39.81
VAPOR DIFFUSION, SITTING DROP
8.0
MPD, CALCIUM ACETATE, TRIS(HYDROXYAMINOMETHANE) BUFFER, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 277.0K
277.0
CALCIUM ACETATE,
1
TRIS(HYDROXYAMINOMETHANE) BUFFER
1
MPD
1
MPD
2
-6.409
1
19
A
1
A
10
0.997
A_DC1:DG10_A
1
-15.155
0.151
0.088
-0.147
-0.426
1
19
A
2
A
9
-1.141
A_DC2:DG9_A
2
-11.883
0.324
0.116
-0.160
-1.632
1
20
A
3
A
8
1.349
A_DA3:DT8_A
3
-3.230
0.023
0.084
-0.109
10.743
1
19
A
4
A
7
1.273
A_DG4:DC7_A
4
-5.138
-0.187
0.248
-0.073
13.144
1
20
A
5
A
6
-0.266
A_DT5:DA6_A
5
-10.891
-0.085
0.003
-0.034
-13.144
1
20
A
6
A
5
-0.266
A_DA6:DT5_A
6
-10.892
0.085
0.003
-0.034
-10.743
1
19
A
7
A
4
1.273
A_DC7:DG4_A
7
-5.138
0.187
0.248
-0.073
1.632
1
20
A
8
A
3
1.349
A_DT8:DA3_A
8
-3.230
-0.023
0.084
-0.109
0.426
1
19
A
9
A
2
-1.141
A_DG9:DC2_A
9
-11.883
-0.324
0.116
-0.160
6.409
1
19
A
10
A
1
0.997
A_DG10:DC1_A
10
-15.155
-0.151
0.088
-0.147
3.281
29.815
A
A
1
2
17.834
A
A
10
9
3.280
9.019
-0.577
0.784
AA_DC1DC2:DG9DG10_AA
1
3.332
-6.589
28.256
-0.415
1.838
2.832
51.099
A
A
2
3
-9.249
A
A
9
8
3.291
-7.949
0.235
2.868
AA_DC2DA3:DT8DG9_AA
2
-1.371
1.596
50.501
3.844
-0.362
3.010
23.539
A
A
3
4
25.090
A
A
8
7
3.097
9.876
0.576
0.801
AA_DA3DG4:DC7DT8_AA
3
-3.906
9.923
21.038
-1.314
-2.709
3.233
35.875
A
A
4
5
-1.203
A
A
7
6
3.288
-0.740
-0.726
0.285
AA_DG4DT5:DA6DC7_AA
4
2.225
-3.615
35.801
0.569
1.497
3.649
48.584
A
A
5
6
3.955
A
A
6
5
3.663
3.252
0.000
-0.105
AA_DT5DA6:DT5DA6_AA
5
0.000
0.000
48.481
-0.407
0.000
3.233
35.875
A
A
6
7
-1.202
A
A
5
4
3.288
-0.740
0.726
0.285
AA_DA6DC7:DG4DT5_AA
6
-2.225
3.615
35.801
0.569
-1.497
3.010
23.539
A
A
7
8
25.090
A
A
4
3
3.097
9.876
-0.576
0.801
AA_DC7DT8:DA3DG4_AA
7
3.906
-9.923
21.038
-1.314
2.709
2.832
51.099
A
A
8
9
-9.249
A
A
3
2
3.291
-7.949
-0.235
2.868
AA_DT8DG9:DC2DA3_AA
8
1.371
-1.596
50.501
3.844
0.362
3.281
29.815
A
A
9
10
17.834
A
A
2
1
3.280
9.019
0.577
0.784
AA_DG9DG10:DC1DC2_AA
9
-3.332
6.588
28.256
-0.415
-1.838
chem_comp_atom
chem_comp_bond
database_2
pdbx_struct_conn_angle
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Structure summary
Data collection
Database references
Derived calculations
1
0
2000-02-21
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-02-01
1
4
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_symmetry
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
1999-10-23
REL
REL
CA
CALCIUM ION
HOH
water
CA
1
2
CA
CA
201
A
CA
2
2
CA
CA
202
A
CA
3
2
CA
CA
203
A
CA
4
2
CA
CA
204
A
HOH
1
3
HOH
HOH
205
A
HOH
2
3
HOH
HOH
206
A
HOH
3
3
HOH
HOH
207
A
HOH
4
3
HOH
HOH
208
A
HOH
5
3
HOH
HOH
209
A
HOH
6
3
HOH
HOH
210
A
HOH
7
3
HOH
HOH
211
A
HOH
8
3
HOH
HOH
212
A
HOH
9
3
HOH
HOH
213
A
HOH
10
3
HOH
HOH
214
A
HOH
11
3
HOH
HOH
215
A
HOH
12
3
HOH
HOH
216
A
HOH
13
3
HOH
HOH
217
A
HOH
14
3
HOH
HOH
218
A
HOH
16
3
HOH
HOH
219
A
HOH
17
3
HOH
HOH
220
A
HOH
18
3
HOH
HOH
221
A
HOH
19
3
HOH
HOH
222
A
HOH
20
3
HOH
HOH
223
A
HOH
21
3
HOH
HOH
224
A
HOH
22
3
HOH
HOH
225
A
HOH
24
3
HOH
HOH
226
A
HOH
25
3
HOH
HOH
227
A
HOH
26
3
HOH
HOH
228
A
HOH
27
3
HOH
HOH
229
A
HOH
29
3
HOH
HOH
230
A
HOH
30
3
HOH
HOH
231
A
HOH
31
3
HOH
HOH
232
A
HOH
32
3
HOH
HOH
233
A
HOH
33
3
HOH
HOH
234
A
HOH
34
3
HOH
HOH
235
A
HOH
35
3
HOH
HOH
236
A
HOH
36
3
HOH
HOH
237
A
HOH
37
3
HOH
HOH
238
A
HOH
38
3
HOH
HOH
239
A
HOH
39
3
HOH
HOH
240
A
HOH
41
3
HOH
HOH
241
A
HOH
42
3
HOH
HOH
242
A
HOH
43
3
HOH
HOH
243
A
HOH
44
3
HOH
HOH
244
A
HOH
45
3
HOH
HOH
245
A
HOH
46
3
HOH
HOH
246
A
HOH
47
3
HOH
HOH
247
A
HOH
48
3
HOH
HOH
248
A
HOH
49
3
HOH
HOH
249
A
HOH
50
3
HOH
HOH
250
A
HOH
51
3
HOH
HOH
251
A
HOH
52
3
HOH
HOH
252
A
HOH
53
3
HOH
HOH
253
A
HOH
54
3
HOH
HOH
254
A
HOH
55
3
HOH
HOH
255
A
HOH
57
3
HOH
HOH
256
A
HOH
58
3
HOH
HOH
257
A
HOH
59
3
HOH
HOH
258
A
HOH
60
3
HOH
HOH
259
A
HOH
61
3
HOH
HOH
260
A
HOH
62
3
HOH
HOH
261
A
HOH
63
3
HOH
HOH
262
A
HOH
64
3
HOH
HOH
263
A
HOH
65
3
HOH
HOH
264
A
HOH
66
3
HOH
HOH
265
A
HOH
67
3
HOH
HOH
266
A
HOH
68
3
HOH
HOH
267
A
HOH
69
3
HOH
HOH
268
A
HOH
70
3
HOH
HOH
269
A
HOH
71
3
HOH
HOH
270
A
HOH
72
3
HOH
HOH
271
A
HOH
73
3
HOH
HOH
272
A
HOH
74
3
HOH
HOH
273
A
HOH
75
3
HOH
HOH
274
A
HOH
76
3
HOH
HOH
275
A
HOH
77
3
HOH
HOH
276
A
HOH
78
3
HOH
HOH
277
A
HOH
79
3
HOH
HOH
278
A
HOH
80
3
HOH
HOH
279
A
HOH
81
3
HOH
HOH
280
A
HOH
82
3
HOH
HOH
281
A
HOH
83
3
HOH
HOH
282
A
HOH
84
3
HOH
HOH
283
A
HOH
85
3
HOH
HOH
284
A
HOH
87
3
HOH
HOH
285
A
HOH
88
3
HOH
HOH
286
A
HOH
89
3
HOH
HOH
287
A
HOH
90
3
HOH
HOH
288
A
HOH
91
3
HOH
HOH
289
A
HOH
92
3
HOH
HOH
290
A
HOH
93
3
HOH
HOH
291
A
HOH
94
3
HOH
HOH
292
A
HOH
95
3
HOH
HOH
293
A
HOH
96
3
HOH
HOH
294
A
HOH
97
3
HOH
HOH
295
A
HOH
98
3
HOH
HOH
296
A
HOH
100
3
HOH
HOH
297
A
HOH
101
3
HOH
HOH
298
A
HOH
102
3
HOH
HOH
299
A
HOH
103
3
HOH
HOH
300
A
HOH
104
3
HOH
HOH
301
A
HOH
105
3
HOH
HOH
302
A
HOH
106
3
HOH
HOH
303
A
HOH
108
3
HOH
HOH
304
A
HOH
110
3
HOH
HOH
305
A
HOH
112
3
HOH
HOH
306
A
HOH
114
3
HOH
HOH
307
A
HOH
115
3
HOH
HOH
308
A
HOH
116
3
HOH
HOH
309
A
HOH
117
3
HOH
HOH
310
A
HOH
119
3
HOH
HOH
311
A
HOH
120
3
HOH
HOH
312
A
HOH
121
3
HOH
HOH
313
A
HOH
122
3
HOH
HOH
314
A
HOH
123
3
HOH
HOH
315
A
HOH
124
3
HOH
HOH
316
A
HOH
125
3
HOH
HOH
317
A
HOH
126
3
HOH
HOH
318
A
HOH
127
3
HOH
HOH
319
A
HOH
128
3
HOH
HOH
320
A
HOH
129
3
HOH
HOH
321
A
HOH
130
3
HOH
HOH
322
A
HOH
131
3
HOH
HOH
323
A
C
1
n
1
DC
1
A
C
2
n
2
DC
2
A
A
3
n
3
DA
3
A
G
4
n
4
DG
4
A
T
5
n
5
DT
5
A
A
6
n
6
DA
6
A
C
7
n
7
DC
7
A
T
8
n
8
DT
8
A
G
9
n
9
DG
9
A
G
10
n
10
DG
10
A
author_defined_assembly
2
dimeric
A
DG
9
A
N7
DG
9
1_556
A
CA
202
C
CA
CA
1_555
A
DG
10
A
O6
DG
10
1_556
78.8
A
DG
9
A
N7
DG
9
1_556
A
CA
202
C
CA
CA
1_555
A
HOH
214
F
O
HOH
1_555
78.9
A
DG
10
A
O6
DG
10
1_556
A
CA
202
C
CA
CA
1_555
A
HOH
214
F
O
HOH
1_555
155.2
A
DG
9
A
N7
DG
9
1_556
A
CA
202
C
CA
CA
1_555
A
HOH
261
F
O
HOH
1_555
120.6
A
DG
10
A
O6
DG
10
1_556
A
CA
202
C
CA
CA
1_555
A
HOH
261
F
O
HOH
1_555
139.9
A
HOH
214
F
O
HOH
1_555
A
CA
202
C
CA
CA
1_555
A
HOH
261
F
O
HOH
1_555
62.7
A
DG
9
A
N7
DG
9
1_556
A
CA
202
C
CA
CA
1_555
A
HOH
262
F
O
HOH
1_556
84.7
A
DG
10
A
O6
DG
10
1_556
A
CA
202
C
CA
CA
1_555
A
HOH
262
F
O
HOH
1_556
98.3
A
HOH
214
F
O
HOH
1_555
A
CA
202
C
CA
CA
1_555
A
HOH
262
F
O
HOH
1_556
90.2
A
HOH
261
F
O
HOH
1_555
A
CA
202
C
CA
CA
1_555
A
HOH
262
F
O
HOH
1_556
54.2
A
DG
9
A
N7
DG
9
1_556
A
CA
202
C
CA
CA
1_555
A
HOH
263
F
O
HOH
1_555
86.5
A
DG
10
A
O6
DG
10
1_556
A
CA
202
C
CA
CA
1_555
A
HOH
263
F
O
HOH
1_555
83.5
A
HOH
214
F
O
HOH
1_555
A
CA
202
C
CA
CA
1_555
A
HOH
263
F
O
HOH
1_555
84.5
A
HOH
261
F
O
HOH
1_555
A
CA
202
C
CA
CA
1_555
A
HOH
263
F
O
HOH
1_555
128.8
A
HOH
262
F
O
HOH
1_556
A
CA
202
C
CA
CA
1_555
A
HOH
263
F
O
HOH
1_555
170.4
A
DG
9
A
N7
DG
9
1_556
A
CA
202
C
CA
CA
1_555
A
HOH
270
F
O
HOH
1_555
121.7
A
DG
10
A
O6
DG
10
1_556
A
CA
202
C
CA
CA
1_555
A
HOH
270
F
O
HOH
1_555
58.2
A
HOH
214
F
O
HOH
1_555
A
CA
202
C
CA
CA
1_555
A
HOH
270
F
O
HOH
1_555
128.1
A
HOH
261
F
O
HOH
1_555
A
CA
202
C
CA
CA
1_555
A
HOH
270
F
O
HOH
1_555
117.6
A
HOH
262
F
O
HOH
1_556
A
CA
202
C
CA
CA
1_555
A
HOH
270
F
O
HOH
1_555
134.6
A
HOH
263
F
O
HOH
1_555
A
CA
202
C
CA
CA
1_555
A
HOH
270
F
O
HOH
1_555
54.0
A
DG
9
A
N7
DG
9
1_556
A
CA
202
C
CA
CA
1_555
A
HOH
270
F
O
HOH
2_556
142.0
A
DG
10
A
O6
DG
10
1_556
A
CA
202
C
CA
CA
1_555
A
HOH
270
F
O
HOH
2_556
63.2
A
HOH
214
F
O
HOH
1_555
A
CA
202
C
CA
CA
1_555
A
HOH
270
F
O
HOH
2_556
138.2
A
HOH
261
F
O
HOH
1_555
A
CA
202
C
CA
CA
1_555
A
HOH
270
F
O
HOH
2_556
90.9
A
HOH
262
F
O
HOH
1_556
A
CA
202
C
CA
CA
1_555
A
HOH
270
F
O
HOH
2_556
99.9
A
HOH
263
F
O
HOH
1_555
A
CA
202
C
CA
CA
1_555
A
HOH
270
F
O
HOH
2_556
89.3
A
HOH
270
F
O
HOH
1_555
A
CA
202
C
CA
CA
1_555
A
HOH
270
F
O
HOH
2_556
36.1
A
HOH
210
F
O
HOH
4_445
A
CA
201
B
CA
CA
1_555
A
HOH
230
F
O
HOH
1_555
82.1
A
HOH
210
F
O
HOH
4_445
A
CA
201
B
CA
CA
1_555
A
HOH
271
F
O
HOH
1_555
88.1
A
HOH
230
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
271
F
O
HOH
1_555
82.0
A
HOH
210
F
O
HOH
4_445
A
CA
201
B
CA
CA
1_555
A
HOH
271
F
O
HOH
2_454
61.3
A
HOH
230
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
271
F
O
HOH
2_454
139.9
A
HOH
271
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
271
F
O
HOH
2_454
81.1
A
HOH
210
F
O
HOH
4_445
A
CA
201
B
CA
CA
1_555
A
HOH
286
F
O
HOH
1_555
110.4
A
HOH
230
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
286
F
O
HOH
1_555
161.2
A
HOH
271
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
286
F
O
HOH
1_555
84.3
A
HOH
271
F
O
HOH
2_454
A
CA
201
B
CA
CA
1_555
A
HOH
286
F
O
HOH
1_555
49.1
A
HOH
210
F
O
HOH
4_445
A
CA
201
B
CA
CA
1_555
A
HOH
318
F
O
HOH
1_555
154.8
A
HOH
230
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
318
F
O
HOH
1_555
74.4
A
HOH
271
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
318
F
O
HOH
1_555
97.3
A
HOH
271
F
O
HOH
2_454
A
CA
201
B
CA
CA
1_555
A
HOH
318
F
O
HOH
1_555
143.8
A
HOH
286
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
318
F
O
HOH
1_555
94.7
A
HOH
210
F
O
HOH
4_445
A
CA
201
B
CA
CA
1_555
A
HOH
319
F
O
HOH
1_555
155.3
A
HOH
230
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
319
F
O
HOH
1_555
110.5
A
HOH
271
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
319
F
O
HOH
1_555
114.1
A
HOH
271
F
O
HOH
2_454
A
CA
201
B
CA
CA
1_555
A
HOH
319
F
O
HOH
1_555
109.6
A
HOH
286
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
319
F
O
HOH
1_555
64.0
A
HOH
318
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
319
F
O
HOH
1_555
38.2
A
HOH
210
F
O
HOH
4_445
A
CA
201
B
CA
CA
1_555
A
HOH
319
F
O
HOH
2_454
121.2
A
HOH
230
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
319
F
O
HOH
2_454
132.9
A
HOH
271
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
319
F
O
HOH
2_454
133.6
A
HOH
271
F
O
HOH
2_454
A
CA
201
B
CA
CA
1_555
A
HOH
319
F
O
HOH
2_454
83.3
A
HOH
286
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
319
F
O
HOH
2_454
53.3
A
HOH
318
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
319
F
O
HOH
2_454
71.7
A
HOH
319
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
319
F
O
HOH
2_454
35.1
A
HOH
210
F
O
HOH
4_445
A
CA
201
B
CA
CA
1_555
A
HOH
320
F
O
HOH
4_444
106.7
A
HOH
230
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
320
F
O
HOH
4_444
68.9
A
HOH
271
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
320
F
O
HOH
4_444
144.7
A
HOH
271
F
O
HOH
2_454
A
CA
201
B
CA
CA
1_555
A
HOH
320
F
O
HOH
4_444
134.2
A
HOH
286
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
320
F
O
HOH
4_444
118.1
A
HOH
318
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
320
F
O
HOH
4_444
56.5
A
HOH
319
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
320
F
O
HOH
4_444
61.7
A
HOH
319
F
O
HOH
2_454
A
CA
201
B
CA
CA
1_555
A
HOH
320
F
O
HOH
4_444
65.3
A
HOH
210
F
O
HOH
4_445
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
1_555
63.7
A
HOH
230
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
1_555
116.2
A
HOH
271
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
1_555
141.7
A
HOH
271
F
O
HOH
2_454
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
1_555
63.1
A
HOH
286
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
1_555
82.4
A
HOH
318
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
1_555
119.4
A
HOH
319
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
1_555
91.7
A
HOH
319
F
O
HOH
2_454
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
1_555
58.5
A
HOH
320
F
O
HOH
4_444
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
1_555
72.0
A
HOH
210
F
O
HOH
4_445
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
2_454
137.3
A
HOH
230
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
2_454
122.2
A
HOH
271
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
2_454
64.5
A
HOH
271
F
O
HOH
2_454
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
2_454
81.7
A
HOH
286
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
2_454
39.3
A
HOH
318
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
2_454
65.6
A
HOH
319
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
2_454
54.3
A
HOH
319
F
O
HOH
2_454
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
2_454
70.2
A
HOH
320
F
O
HOH
4_444
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
2_454
114.6
A
HOH
321
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
2_454
119.2
A
HOH
210
F
O
HOH
4_445
A
CA
201
B
CA
CA
1_555
A
HOH
323
F
O
HOH
1_555
75.4
A
HOH
230
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
323
F
O
HOH
1_555
78.2
A
HOH
271
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
323
F
O
HOH
1_555
155.7
A
HOH
271
F
O
HOH
2_454
A
CA
201
B
CA
CA
1_555
A
HOH
323
F
O
HOH
1_555
105.4
A
HOH
286
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
323
F
O
HOH
1_555
117.9
A
HOH
318
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
323
F
O
HOH
1_555
90.8
A
HOH
319
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
323
F
O
HOH
1_555
86.2
A
HOH
319
F
O
HOH
2_454
A
CA
201
B
CA
CA
1_555
A
HOH
323
F
O
HOH
1_555
70.7
A
HOH
320
F
O
HOH
4_444
A
CA
201
B
CA
CA
1_555
A
HOH
323
F
O
HOH
1_555
34.4
A
HOH
321
F
O
HOH
1_555
A
CA
201
B
CA
CA
1_555
A
HOH
323
F
O
HOH
1_555
43.3
A
HOH
321
F
O
HOH
2_454
A
CA
201
B
CA
CA
1_555
A
HOH
323
F
O
HOH
1_555
139.0
A
HOH
219
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
240
A
F
O
HOH
1_555
63.4
A
HOH
219
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
240
B
F
O
HOH
1_555
89.0
A
HOH
240
A
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
240
B
F
O
HOH
1_555
29.8
A
HOH
219
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
264
F
O
HOH
1_555
90.4
A
HOH
240
A
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
264
F
O
HOH
1_555
78.6
A
HOH
240
B
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
264
F
O
HOH
1_555
93.0
A
HOH
219
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
265
F
O
HOH
1_555
143.4
A
HOH
240
A
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
265
F
O
HOH
1_555
81.5
A
HOH
240
B
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
265
F
O
HOH
1_555
54.4
A
HOH
264
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
265
F
O
HOH
1_555
92.8
A
HOH
219
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
266
F
O
HOH
1_555
79.5
A
HOH
240
A
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
266
F
O
HOH
1_555
88.2
A
HOH
240
B
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
266
F
O
HOH
1_555
77.4
A
HOH
264
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
266
F
O
HOH
1_555
166.0
A
HOH
265
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
266
F
O
HOH
1_555
89.8
A
HOH
219
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
267
F
O
HOH
1_555
139.9
A
HOH
240
A
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
267
F
O
HOH
1_555
153.0
A
HOH
240
B
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
267
F
O
HOH
1_555
123.4
A
HOH
264
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
267
F
O
HOH
1_555
108.9
A
HOH
265
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
267
F
O
HOH
1_555
72.4
A
HOH
266
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
267
F
O
HOH
1_555
85.0
A
HOH
219
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
268
F
O
HOH
1_555
70.4
A
HOH
240
A
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
268
F
O
HOH
1_555
131.3
A
HOH
240
B
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
268
F
O
HOH
1_555
159.4
A
HOH
264
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
268
F
O
HOH
1_555
87.4
A
HOH
265
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
268
F
O
HOH
1_555
146.2
A
HOH
266
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
268
F
O
HOH
1_555
98.0
A
HOH
267
F
O
HOH
1_555
A
CA
203
D
CA
CA
1_555
A
HOH
268
F
O
HOH
1_555
75.5
A
HOH
229
B
F
O
HOH
1_555
A
CA
204
B
E
CA
CA
1_555
A
HOH
235
F
O
HOH
1_555
85.9
A
HOH
229
B
F
O
HOH
1_555
A
CA
204
B
E
CA
CA
1_555
A
HOH
304
B
F
O
HOH
1_555
135.5
A
HOH
235
F
O
HOH
1_555
A
CA
204
B
E
CA
CA
1_555
A
HOH
304
B
F
O
HOH
1_555
103.5
A
HOH
229
B
F
O
HOH
1_555
A
CA
204
B
E
CA
CA
1_555
A
HOH
306
B
F
O
HOH
2_555
102.6
A
HOH
235
F
O
HOH
1_555
A
CA
204
B
E
CA
CA
1_555
A
HOH
306
B
F
O
HOH
2_555
148.5
A
HOH
304
B
F
O
HOH
1_555
A
CA
204
B
E
CA
CA
1_555
A
HOH
306
B
F
O
HOH
2_555
49.7
A
HOH
229
A
F
O
HOH
1_555
A
CA
204
A
E
CA
CA
1_555
A
HOH
235
F
O
HOH
1_555
61.5
A
HOH
229
A
F
O
HOH
1_555
A
CA
204
A
E
CA
CA
1_555
A
HOH
304
A
F
O
HOH
1_555
130.6
A
HOH
235
F
O
HOH
1_555
A
CA
204
A
E
CA
CA
1_555
A
HOH
304
A
F
O
HOH
1_555
79.0
A
HOH
229
A
F
O
HOH
1_555
A
CA
204
A
E
CA
CA
1_555
A
HOH
306
A
F
O
HOH
2_555
101.3
A
HOH
235
F
O
HOH
1_555
A
CA
204
A
E
CA
CA
1_555
A
HOH
306
A
F
O
HOH
2_555
141.3
A
HOH
304
A
F
O
HOH
1_555
A
CA
204
A
E
CA
CA
1_555
A
HOH
306
A
F
O
HOH
2_555
91.1
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
2_555
-x,y,-z
crystal symmetry operation
0.0000000000
0.0000000000
0.0000000000
1
A
HOH
253
F
HOH
1
A
C4'
DC
1
PLANAR
A
1
A
DC
1
A
0.086
SIDE CHAIN
1
A
DA
3
A
0.068
SIDE CHAIN
1
A
DT
5
A
0.069
SIDE CHAIN
1
A
DA
6
A
0.092
SIDE CHAIN
1
A
DC
7
A
0.067
SIDE CHAIN
1
A
DG
9
0.068
SIDE CHAIN
1
24.13
1.20
115.70
139.83
A
A
A
C5'
C4'
C3'
DC
DC
DC
1
1
1
A
A
A
N
1
4.17
0.30
108.30
112.47
A
A
A
O4'
C1'
N1
DC
DC
DC
1
1
1
A
A
N
1
-2.80
0.40
121.90
119.10
A
A
A
N3
C4
C5
DC
DC
DC
1
1
1
N
1
3.03
0.30
108.30
111.33
A
A
A
O4'
C1'
N1
DC
DC
DC
2
2
2
A
A
N
1
-4.98
0.80
102.40
97.42
A
A
A
C3'
C2'
C1'
DG
DG
DG
4
4
4
A
N
1
-5.08
0.80
102.40
97.32
A
A
A
C3'
C2'
C1'
DG
DG
DG
4
4
4
B
N
1
2.33
0.30
108.30
110.63
A
A
A
O4'
C1'
N1
DT
DT
DT
5
5
5
A
A
A
N
1
-4.35
0.60
127.20
122.85
A
A
A
C2
N3
C4
DT
DT
DT
5
5
5
A
A
A
N
1
-6.08
0.60
118.00
111.92
A
A
A
C4
C5
C6
DT
DT
DT
5
5
5
B
B
B
N
1
5.31
0.60
123.70
129.01
A
A
A
C5
C6
N1
DT
DT
DT
5
5
5
B
B
B
N
1
-3.69
0.60
119.90
116.21
A
A
A
N3
C4
O4
DT
DT
DT
5
5
5
A
A
A
N
1
4.14
0.60
119.90
124.04
A
A
A
N3
C4
O4
DT
DT
DT
5
5
5
B
B
B
N
1
-4.20
0.70
124.90
120.70
A
A
A
C5
C4
O4
DT
DT
DT
5
5
5
B
B
B
N
1
-7.81
0.60
119.00
111.19
A
A
A
C4
C5
C7
DT
DT
DT
5
5
5
A
A
A
N
1
6.80
0.60
119.00
125.80
A
A
A
C4
C5
C7
DT
DT
DT
5
5
5
B
B
B
N
1
-5.67
0.70
108.00
102.33
A
A
A
O4'
C1'
N9
DA
DA
DA
6
6
6
A
A
N
1
8.39
0.30
108.30
116.69
A
A
A
O4'
C1'
N9
DA
DA
DA
6
6
6
B
B
N
1
11.24
1.20
119.70
130.94
A
A
A
C3'
O3'
P
DA
DA
DC
6
6
7
B
B
B
Y
1
-6.61
1.00
110.10
103.49
A
A
A
C1'
O4'
C4'
DC
DC
DC
7
7
7
N
1
10.91
1.20
119.70
130.61
A
A
A
C3'
O3'
P
DC
DC
DT
7
7
8
B
B
B
Y
1
A
A
O4'
C4'
DC
DC
1
1
-0.127
0.010
1.446
1.319
A
A
N
1
A
A
N1
C6
DC
DC
1
1
-0.080
0.006
1.367
1.287
N
1
A
A
P
O5'
DT
DT
5
5
0.074
0.010
1.593
1.667
B
B
N
1
A
A
C2
N3
DT
DT
5
5
0.118
0.008
1.373
1.491
A
A
N
1
A
A
C2
N3
DT
DT
5
5
-0.093
0.008
1.373
1.280
B
B
N
1
A
A
N3
C4
DT
DT
5
5
-0.122
0.008
1.382
1.260
A
A
N
1
A
A
N3
C4
DT
DT
5
5
0.097
0.008
1.382
1.479
B
B
N
1
A
A
C5
C6
DT
DT
5
5
-0.098
0.007
1.339
1.241
A
A
N
1
A
A
C5
C6
DT
DT
5
5
0.072
0.007
1.339
1.411
B
B
N
1
A
A
C2
O2
DT
DT
5
5
-0.050
0.008
1.220
1.170
B
B
N
1
A
A
C4
O4
DT
DT
5
5
0.129
0.009
1.228
1.357
A
A
N
1
A
A
C4
O4
DT
DT
5
5
-0.101
0.009
1.228
1.127
B
B
N
1
A
A
C5
C7
DT
DT
5
5
0.061
0.006
1.496
1.557
A
A
N
0.1310000
0.1050000
0.1050000
0.74
16.0
1783
29991
29991
5.9
90.0
RANDOM
1,2,3
THROUGHOUT
0
0
SADI RESTRAINTS ON BACKBONE
0.74
16.0
119
325
4
202
0
0.74
16.0
1D8G
29991
29991
0.0560000
1,2,3
26.7
4.3
90.0
0.2390000
0.74
0.75
1,2,3
71.1
phasing
AMoRE
refinement
SHELXL-97
data reduction
DENZO
data scaling
SCALEPACK
ULTRAHIGH RESOLUTION CRYSTAL STRUCTURE OF B-DNA DECAMER D(CCAGTACTGG)
1
N
N
2
N
N
2
N
N
2
N
N
2
N
N
3
N
N
metalc
2.650
A
DG
9
A
N7
DG
9
1_556
A
CA
202
C
CA
CA
1_555
metalc
2.637
A
DG
10
A
O6
DG
10
1_556
A
CA
202
C
CA
CA
1_555
metalc
2.776
A
CA
201
B
CA
CA
1_555
A
HOH
210
F
O
HOH
4_445
metalc
2.378
A
CA
201
B
CA
CA
1_555
A
HOH
230
F
O
HOH
1_555
metalc
1.828
A
CA
201
B
CA
CA
1_555
A
HOH
271
F
O
HOH
1_555
metalc
2.658
A
CA
201
B
CA
CA
1_555
A
HOH
271
F
O
HOH
2_454
metalc
1.999
A
CA
201
B
CA
CA
1_555
A
HOH
286
F
O
HOH
1_555
metalc
2.389
A
CA
201
B
CA
CA
1_555
A
HOH
318
F
O
HOH
1_555
metalc
2.315
A
CA
201
B
CA
CA
1_555
A
HOH
319
F
O
HOH
1_555
metalc
2.587
A
CA
201
B
CA
CA
1_555
A
HOH
319
F
O
HOH
2_454
metalc
2.893
A
CA
201
B
CA
CA
1_555
A
HOH
320
F
O
HOH
4_444
metalc
1.812
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
1_555
metalc
2.597
A
CA
201
B
CA
CA
1_555
A
HOH
321
F
O
HOH
2_454
metalc
2.387
A
CA
201
B
CA
CA
1_555
A
HOH
323
F
O
HOH
1_555
metalc
2.594
A
CA
202
C
CA
CA
1_555
A
HOH
214
F
O
HOH
1_555
metalc
2.672
A
CA
202
C
CA
CA
1_555
A
HOH
261
F
O
HOH
1_555
metalc
2.775
A
CA
202
C
CA
CA
1_555
A
HOH
262
F
O
HOH
1_556
metalc
2.645
A
CA
202
C
CA
CA
1_555
A
HOH
263
F
O
HOH
1_555
metalc
3.313
A
CA
202
C
CA
CA
1_555
A
HOH
270
F
O
HOH
1_555
metalc
2.403
A
CA
202
C
CA
CA
1_555
A
HOH
270
F
O
HOH
2_556
metalc
2.466
A
CA
203
D
CA
CA
1_555
A
HOH
219
F
O
HOH
1_555
metalc
2.448
A
A
CA
203
D
CA
CA
1_555
A
HOH
240
F
O
HOH
1_555
metalc
2.549
B
A
CA
203
D
CA
CA
1_555
A
HOH
240
F
O
HOH
1_555
metalc
2.246
A
CA
203
D
CA
CA
1_555
A
HOH
264
F
O
HOH
1_555
metalc
2.139
A
CA
203
D
CA
CA
1_555
A
HOH
265
F
O
HOH
1_555
metalc
2.270
A
CA
203
D
CA
CA
1_555
A
HOH
266
F
O
HOH
1_555
metalc
2.353
A
CA
203
D
CA
CA
1_555
A
HOH
267
F
O
HOH
1_555
metalc
2.457
A
CA
203
D
CA
CA
1_555
A
HOH
268
F
O
HOH
1_555
metalc
3.106
B
B
A
CA
204
E
CA
CA
1_555
A
HOH
229
F
O
HOH
1_555
metalc
3.294
A
A
A
CA
204
E
CA
CA
1_555
A
HOH
229
F
O
HOH
1_555
metalc
2.368
A
A
CA
204
E
CA
CA
1_555
A
HOH
235
F
O
HOH
1_555
metalc
2.472
B
A
CA
204
E
CA
CA
1_555
A
HOH
235
F
O
HOH
1_555
metalc
2.819
B
B
A
CA
204
E
CA
CA
1_555
A
HOH
304
F
O
HOH
1_555
metalc
2.027
A
A
A
CA
204
E
CA
CA
1_555
A
HOH
304
F
O
HOH
1_555
metalc
3.111
B
B
A
CA
204
E
CA
CA
1_555
A
HOH
306
F
O
HOH
2_555
metalc
2.474
A
A
A
CA
204
E
CA
CA
1_555
A
HOH
306
F
O
HOH
2_555
hydrog
WATSON-CRICK
A
DC
1
A
N3
DC
1
1_555
A
DG
10
A
N1
DG
10
2_555
hydrog
WATSON-CRICK
A
DC
1
A
N4
DC
1
1_555
A
DG
10
A
O6
DG
10
2_555
hydrog
WATSON-CRICK
A
DC
1
A
O2
DC
1
1_555
A
DG
10
A
N2
DG
10
2_555
hydrog
WATSON-CRICK
A
DC
2
A
N3
DC
2
1_555
A
DG
9
A
N1
DG
9
2_555
hydrog
WATSON-CRICK
A
DC
2
A
N4
DC
2
1_555
A
DG
9
A
O6
DG
9
2_555
hydrog
WATSON-CRICK
A
DC
2
A
O2
DC
2
1_555
A
DG
9
A
N2
DG
9
2_555
hydrog
WATSON-CRICK
A
DA
3
A
N1
DA
3
1_555
A
DT
8
A
N3
DT
8
2_555
hydrog
WATSON-CRICK
A
DA
3
A
N6
DA
3
1_555
A
DT
8
A
O4
DT
8
2_555
hydrog
WATSON-CRICK
A
DG
4
A
N1
DG
4
1_555
A
DC
7
A
N3
DC
7
2_555
hydrog
WATSON-CRICK
A
DG
4
A
N2
DG
4
1_555
A
DC
7
A
O2
DC
7
2_555
hydrog
WATSON-CRICK
A
DG
4
A
O6
DG
4
1_555
A
DC
7
A
N4
DC
7
2_555
hydrog
WATSON-CRICK
A
A
DT
5
A
N3
DT
5
1_555
A
DA
6
A
N1
DA
6
2_555
hydrog
WATSON-CRICK
A
A
DT
5
A
O4
DT
5
1_555
A
DA
6
A
N6
DA
6
2_555
hydrog
WATSON-CRICK
A
A
DA
6
A
N1
DA
6
1_555
A
DT
5
A
N3
DT
5
2_555
hydrog
WATSON-CRICK
A
A
DA
6
A
N6
DA
6
1_555
A
DT
5
A
O4
DT
5
2_555
hydrog
WATSON-CRICK
A
DC
7
A
N3
DC
7
1_555
A
DG
4
A
N1
DG
4
2_555
hydrog
WATSON-CRICK
A
DC
7
A
N4
DC
7
1_555
A
DG
4
A
O6
DG
4
2_555
hydrog
WATSON-CRICK
A
DC
7
A
O2
DC
7
1_555
A
DG
4
A
N2
DG
4
2_555
hydrog
WATSON-CRICK
A
DT
8
A
N3
DT
8
1_555
A
DA
3
A
N1
DA
3
2_555
hydrog
WATSON-CRICK
A
DT
8
A
O4
DT
8
1_555
A
DA
3
A
N6
DA
3
2_555
hydrog
WATSON-CRICK
A
DG
9
A
N1
DG
9
1_555
A
DC
2
A
N3
DC
2
2_555
hydrog
WATSON-CRICK
A
DG
9
A
N2
DG
9
1_555
A
DC
2
A
O2
DC
2
2_555
hydrog
WATSON-CRICK
A
DG
9
A
O6
DG
9
1_555
A
DC
2
A
N4
DC
2
2_555
hydrog
WATSON-CRICK
A
DG
10
A
N1
DG
10
1_555
A
DC
1
A
N3
DC
1
2_555
hydrog
WATSON-CRICK
A
DG
10
A
N2
DG
10
1_555
A
DC
1
A
O2
DC
1
2_555
hydrog
WATSON-CRICK
A
DG
10
A
O6
DG
10
1_555
A
DC
1
A
N4
DC
1
2_555
DNA
B-DNA, ALTERNATE CONFORMATION, ULTRAHIGH RESOLUTION, TRP REPRESSOR, POLYAMIDE, DNA
1D8G
PDB
1
1D8G
1
10
1D8G
1
10
1D8G
A
1
1
10
BINDING SITE FOR RESIDUE CA A 201
A
CA
201
Software
12
BINDING SITE FOR RESIDUE CA A 202
A
CA
202
Software
7
BINDING SITE FOR RESIDUE CA A 203
A
CA
203
Software
7
BINDING SITE FOR RESIDUE CA A 204
A
CA
204
Software
8
A
HOH
210
F
HOH
12
4_445
A
HOH
230
F
HOH
12
1_555
A
HOH
271
F
HOH
12
2_454
A
HOH
271
F
HOH
12
1_555
A
HOH
286
F
HOH
12
1_555
A
HOH
318
F
HOH
12
1_555
A
HOH
319
F
HOH
12
2_454
A
HOH
319
F
HOH
12
1_555
A
HOH
320
F
HOH
12
4_444
A
HOH
321
F
HOH
12
1_555
A
HOH
321
F
HOH
12
2_454
A
HOH
323
F
HOH
12
1_555
A
DG
9
A
DG
9
7
1_556
A
DG
10
A
DG
10
7
1_556
A
HOH
214
F
HOH
7
1_555
A
HOH
261
F
HOH
7
1_555
A
HOH
262
F
HOH
7
1_556
A
HOH
263
F
HOH
7
1_555
A
HOH
270
F
HOH
7
2_556
A
HOH
219
F
HOH
7
1_555
A
HOH
240
F
HOH
7
1_555
A
HOH
264
F
HOH
7
1_555
A
HOH
265
F
HOH
7
1_555
A
HOH
266
F
HOH
7
1_555
A
HOH
267
F
HOH
7
1_555
A
HOH
268
F
HOH
7
1_555
A
HOH
229
F
HOH
8
1_555
A
HOH
235
F
HOH
8
1_555
A
HOH
236
F
HOH
8
2_555
A
HOH
249
F
HOH
8
2_555
A
HOH
250
F
HOH
8
4_445
A
HOH
251
F
HOH
8
2_555
A
HOH
304
F
HOH
8
1_555
A
HOH
306
F
HOH
8
2_555
5
monoclinic
C 1 2 1