0.012555
0.000000
0.000000
0.000000
0.008645
0.000000
0.000000
0.000000
0.028711
0.00000
0.00000
0.00000
Nishino, T.
Iwasaki, H.
Kataoka, M.
Ariyoshi, M.
Fujita, T.
Shinagawa, H.
Morikawa, K.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
8
90.00
90.00
90.00
79.600
115.600
34.800
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
H2 O
18.015
WATER
non-polymer
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
N
1
N
N
N
2
S
C
N
3
N
C
N
4
N
O
N
5
N
C
N
6
N
O
N
7
N
H
N
8
N
H
N
9
N
H
N
10
N
H
N
11
N
H
N
12
N
H
N
13
N
H
N
14
N
N
N
15
S
C
N
16
N
C
N
17
N
O
N
18
N
C
N
19
N
C
N
20
N
C
N
21
N
N
N
22
N
C
N
23
N
N
N
24
N
N
N
25
N
O
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
H
N
36
N
H
N
37
N
H
N
38
N
H
N
39
N
H
N
40
N
H
N
41
N
N
N
42
S
C
N
43
N
C
N
44
N
O
N
45
N
C
N
46
N
C
N
47
N
O
N
48
N
N
N
49
N
O
N
50
N
H
N
51
N
H
N
52
N
H
N
53
N
H
N
54
N
H
N
55
N
H
N
56
N
H
N
57
N
H
N
58
N
N
N
59
S
C
N
60
N
C
N
61
N
O
N
62
N
C
N
63
N
C
N
64
N
O
N
65
N
O
N
66
N
O
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
H
N
73
N
H
N
74
N
N
N
75
R
C
N
76
N
C
N
77
N
O
N
78
N
C
N
79
N
S
N
80
N
O
N
81
N
H
N
82
N
H
N
83
N
H
N
84
N
H
N
85
N
H
N
86
N
H
N
87
N
H
N
88
N
N
N
89
S
C
N
90
N
C
N
91
N
O
N
92
N
C
N
93
N
C
N
94
N
C
N
95
N
O
N
96
N
N
N
97
N
O
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
N
N
109
S
C
N
110
N
C
N
111
N
O
N
112
N
C
N
113
N
C
N
114
N
C
N
115
N
O
N
116
N
O
N
117
N
O
N
118
N
H
N
119
N
H
N
120
N
H
N
121
N
H
N
122
N
H
N
123
N
H
N
124
N
H
N
125
N
H
N
126
N
H
N
127
N
N
N
128
N
C
N
129
N
C
N
130
N
O
N
131
N
O
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
N
N
138
S
C
N
139
N
C
N
140
N
O
N
141
N
C
Y
142
N
C
Y
143
N
N
Y
144
N
C
Y
145
N
C
Y
146
N
N
N
147
N
O
N
148
N
H
N
149
N
H
N
150
N
H
N
151
N
H
N
152
N
H
N
153
N
H
N
154
N
H
N
155
N
H
N
156
N
H
N
157
N
H
N
158
N
O
N
159
N
H
N
160
N
H
N
161
N
N
N
162
S
C
N
163
N
C
N
164
N
O
N
165
S
C
N
166
N
C
N
167
N
C
N
168
N
C
N
169
N
O
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
N
N
184
S
C
N
185
N
C
N
186
N
O
N
187
N
C
N
188
N
C
N
189
N
C
N
190
N
C
N
191
N
O
N
192
N
H
N
193
N
H
N
194
N
H
N
195
N
H
N
196
N
H
N
197
N
H
N
198
N
H
N
199
N
H
N
200
N
H
N
201
N
H
N
202
N
H
N
203
N
H
N
204
N
H
N
205
N
N
N
206
S
C
N
207
N
C
N
208
N
O
N
209
N
C
N
210
N
C
N
211
N
C
N
212
N
C
N
213
N
N
N
214
N
O
N
215
N
H
N
216
N
H
N
217
N
H
N
218
N
H
N
219
N
H
N
220
N
H
N
221
N
H
N
222
N
H
N
223
N
H
N
224
N
H
N
225
N
H
N
226
N
H
N
227
N
H
N
228
N
H
N
229
N
H
N
230
N
N
N
231
S
C
N
232
N
C
N
233
N
O
N
234
N
C
N
235
N
C
N
236
N
S
N
237
N
C
N
238
N
O
N
239
N
H
N
240
N
H
N
241
N
H
N
242
N
H
N
243
N
H
N
244
N
H
N
245
N
H
N
246
N
H
N
247
N
H
N
248
N
H
N
249
N
H
N
250
N
N
N
251
S
C
N
252
N
C
N
253
N
O
N
254
N
C
Y
255
N
C
Y
256
N
C
Y
257
N
C
Y
258
N
C
Y
259
N
C
Y
260
N
C
N
261
N
O
N
262
N
H
N
263
N
H
N
264
N
H
N
265
N
H
N
266
N
H
N
267
N
H
N
268
N
H
N
269
N
H
N
270
N
H
N
271
N
H
N
272
N
H
N
273
N
N
N
274
S
C
N
275
N
C
N
276
N
O
N
277
N
C
N
278
N
C
N
279
N
C
N
280
N
O
N
281
N
H
N
282
N
H
N
283
N
H
N
284
N
H
N
285
N
H
N
286
N
H
N
287
N
H
N
288
N
H
N
289
N
H
N
290
N
N
N
291
S
C
N
292
N
C
N
293
N
O
N
294
N
C
N
295
N
O
N
296
N
O
N
297
N
H
N
298
N
H
N
299
N
H
N
300
N
H
N
301
N
H
N
302
N
H
N
303
N
H
N
304
N
N
N
305
S
C
N
306
N
C
N
307
N
O
N
308
R
C
N
309
N
O
N
310
N
C
N
311
N
O
N
312
N
H
N
313
N
H
N
314
N
H
N
315
N
H
N
316
N
H
N
317
N
H
N
318
N
H
N
319
N
H
N
320
N
H
N
321
N
N
N
322
S
C
N
323
N
C
N
324
N
O
N
325
N
C
Y
326
N
C
Y
327
N
C
Y
328
N
C
Y
329
N
C
Y
330
N
C
Y
331
N
C
N
332
N
O
N
333
N
O
N
334
N
H
N
335
N
H
N
336
N
H
N
337
N
H
N
338
N
H
N
339
N
H
N
340
N
H
N
341
N
H
N
342
N
H
N
343
N
H
N
344
N
H
N
345
N
N
N
346
S
C
N
347
N
C
N
348
N
O
N
349
N
C
N
350
N
C
N
351
N
C
N
352
N
O
N
353
N
H
N
354
N
H
N
355
N
H
N
356
N
H
N
357
N
H
N
358
N
H
N
359
N
H
N
360
N
H
N
361
N
H
N
362
N
H
N
363
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
doub
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
doub
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
doub
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
doub
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
N
59
N
sing
N
60
N
sing
N
61
N
doub
N
62
N
sing
N
63
N
sing
N
64
N
sing
N
65
N
sing
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
sing
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
doub
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
doub
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
doub
N
98
N
sing
N
99
N
sing
N
100
N
sing
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
sing
N
106
N
sing
N
107
N
sing
N
108
N
doub
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
doub
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
doub
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
N
131
N
sing
N
132
N
sing
N
133
N
sing
N
134
N
sing
N
135
N
doub
N
136
N
sing
N
137
N
sing
N
138
N
sing
N
139
N
sing
Y
140
N
sing
Y
141
N
doub
Y
142
N
doub
N
143
N
sing
Y
144
N
sing
N
145
N
sing
Y
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
doub
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
doub
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
N
188
N
sing
N
189
N
sing
N
190
N
sing
N
191
N
sing
N
192
N
sing
N
193
N
sing
N
194
N
sing
N
195
N
sing
N
196
N
sing
N
197
N
sing
N
198
N
sing
N
199
N
sing
N
200
N
doub
N
201
N
sing
N
202
N
sing
N
203
N
sing
N
204
N
sing
N
205
N
sing
N
206
N
sing
N
207
N
sing
N
208
N
sing
N
209
N
sing
N
210
N
sing
N
211
N
sing
N
212
N
sing
N
213
N
sing
N
214
N
sing
N
215
N
sing
N
216
N
sing
N
217
N
sing
N
218
N
sing
N
219
N
sing
N
220
N
sing
N
221
N
sing
N
222
N
sing
N
223
N
sing
N
224
N
doub
N
225
N
sing
N
226
N
sing
N
227
N
sing
N
228
N
sing
N
229
N
sing
N
230
N
sing
N
231
N
sing
N
232
N
sing
N
233
N
sing
N
234
N
sing
N
235
N
sing
N
236
N
sing
N
237
N
sing
N
238
N
sing
N
239
N
sing
N
240
N
sing
N
241
N
sing
N
242
N
sing
N
243
N
doub
N
244
N
sing
N
245
N
sing
N
246
N
sing
N
247
N
sing
Y
248
N
doub
Y
249
N
sing
Y
250
N
sing
N
251
N
sing
Y
252
N
doub
N
253
N
sing
Y
254
N
doub
N
255
N
sing
Y
256
N
sing
N
257
N
sing
N
258
N
sing
N
259
N
sing
N
260
N
sing
N
261
N
sing
N
262
N
sing
N
263
N
sing
N
264
N
sing
N
265
N
sing
N
266
N
doub
N
267
N
sing
N
268
N
sing
N
269
N
sing
N
270
N
sing
N
271
N
sing
N
272
N
sing
N
273
N
sing
N
274
N
sing
N
275
N
sing
N
276
N
sing
N
277
N
sing
N
278
N
sing
N
279
N
sing
N
280
N
sing
N
281
N
sing
N
282
N
sing
N
283
N
doub
N
284
N
sing
N
285
N
sing
N
286
N
sing
N
287
N
sing
N
288
N
sing
N
289
N
sing
N
290
N
sing
N
291
N
sing
N
292
N
sing
N
293
N
sing
N
294
N
sing
N
295
N
sing
N
296
N
doub
N
297
N
sing
N
298
N
sing
N
299
N
sing
N
300
N
sing
N
301
N
sing
N
302
N
sing
N
303
N
sing
N
304
N
sing
N
305
N
sing
N
306
N
sing
N
307
N
sing
N
308
N
sing
N
309
N
sing
N
310
N
sing
N
311
N
sing
N
312
N
doub
N
313
N
sing
N
314
N
sing
N
315
N
sing
N
316
N
sing
Y
317
N
doub
Y
318
N
sing
Y
319
N
sing
N
320
N
sing
Y
321
N
doub
N
322
N
sing
Y
323
N
doub
N
324
N
sing
Y
325
N
sing
N
326
N
sing
N
327
N
sing
N
328
N
sing
N
329
N
sing
N
330
N
sing
N
331
N
sing
N
332
N
sing
N
333
N
sing
N
334
N
sing
N
335
N
sing
N
336
N
doub
N
337
N
sing
N
338
N
sing
N
339
N
sing
N
340
N
sing
N
341
N
sing
N
342
N
sing
N
343
N
sing
N
344
N
sing
N
345
N
sing
N
346
N
sing
N
347
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
298
407
416
10.1006/jmbi.2000.3675
10772859
Modulation of RuvB function by the mobile domain III of the Holliday junction recognition protein RuvA.
2000
10.2210/pdb1d8l/pdb
pdb_00001d8l
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
IMAGE PLATE
1998-01-22
MAC Science DIP-2020
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
OTHER
16499.352
PROTEIN (HOLLIDAY JUNCTION DNA HELICASE RUVA)
NH2 REGION
2
man
polymer
18.015
water
22
nat
water
no
no
MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNG
VGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLT
MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNG
VGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLT
A,B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Escherichia
Escherichia
sample
562
Escherichia coli
562
Escherichia coli
PLASMID
PET11
1
2.42
49.28
4.60
pH 4.60
diffrn_source
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Version format compliance
Data collection
Data collection
Database references
1
0
2000-05-03
1
1
2008-04-27
1
2
2011-07-13
1
3
2018-04-04
1
4
2024-02-07
_diffrn_source.type
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
RCSB
Y
RCSB
1999-10-25
REL
REL
HOH
water
HOH
1
2
HOH
HOH
150
A
HOH
2
2
HOH
HOH
151
A
HOH
3
2
HOH
HOH
152
A
HOH
4
2
HOH
HOH
153
A
HOH
5
2
HOH
HOH
154
A
HOH
6
2
HOH
HOH
155
A
HOH
7
2
HOH
HOH
156
A
HOH
8
2
HOH
HOH
157
A
HOH
9
2
HOH
HOH
158
A
HOH
10
2
HOH
HOH
159
A
HOH
11
2
HOH
HOH
160
A
HOH
15
2
HOH
HOH
161
A
HOH
16
2
HOH
HOH
162
A
HOH
17
2
HOH
HOH
163
A
HOH
18
2
HOH
HOH
164
A
HOH
19
2
HOH
HOH
165
A
HOH
20
2
HOH
HOH
166
A
HOH
21
2
HOH
HOH
167
A
HOH
22
2
HOH
HOH
168
A
HOH
13
2
HOH
HOH
169
A
HOH
12
2
HOH
HOH
150
B
HOH
14
2
HOH
HOH
151
B
MET
1
n
1
MET
1
A
ILE
2
n
2
ILE
2
A
GLY
3
n
3
GLY
3
A
ARG
4
n
4
ARG
4
A
LEU
5
n
5
LEU
5
A
ARG
6
n
6
ARG
6
A
GLY
7
n
7
GLY
7
A
ILE
8
n
8
ILE
8
A
ILE
9
n
9
ILE
9
A
ILE
10
n
10
ILE
10
A
GLU
11
n
11
GLU
11
A
LYS
12
n
12
LYS
12
A
GLN
13
n
13
GLN
13
A
PRO
14
n
14
PRO
14
A
PRO
15
n
15
PRO
15
A
LEU
16
n
16
LEU
16
A
VAL
17
n
17
VAL
17
A
LEU
18
n
18
LEU
18
A
ILE
19
n
19
ILE
19
A
GLU
20
n
20
GLU
20
A
VAL
21
n
21
VAL
21
A
GLY
22
n
22
GLY
22
A
GLY
23
n
23
GLY
23
A
VAL
24
n
24
VAL
24
A
GLY
25
n
25
GLY
25
A
TYR
26
n
26
TYR
26
A
GLU
27
n
27
GLU
27
A
VAL
28
n
28
VAL
28
A
HIS
29
n
29
HIS
29
A
MET
30
n
30
MET
30
A
PRO
31
n
31
PRO
31
A
MET
32
n
32
MET
32
A
THR
33
n
33
THR
33
A
CYS
34
n
34
CYS
34
A
PHE
35
n
35
PHE
35
A
TYR
36
n
36
TYR
36
A
GLU
37
n
37
GLU
37
A
LEU
38
n
38
LEU
38
A
PRO
39
n
39
PRO
39
A
GLU
40
n
40
GLU
40
A
ALA
41
n
41
ALA
41
A
GLY
42
n
42
GLY
42
A
GLN
43
n
43
GLN
43
A
GLU
44
n
44
GLU
44
A
ALA
45
n
45
ALA
45
A
ILE
46
n
46
ILE
46
A
VAL
47
n
47
VAL
47
A
PHE
48
n
48
PHE
48
A
THR
49
n
49
THR
49
A
HIS
50
n
50
HIS
50
A
PHE
51
n
51
PHE
51
A
VAL
52
n
52
VAL
52
A
VAL
53
n
53
VAL
53
A
ARG
54
n
54
ARG
54
A
GLU
55
n
55
GLU
55
A
ASP
56
n
56
ASP
56
A
ALA
57
n
57
ALA
57
A
GLN
58
n
58
GLN
58
A
LEU
59
n
59
LEU
59
A
LEU
60
n
60
LEU
60
A
TYR
61
n
61
TYR
61
A
GLY
62
n
62
GLY
62
A
PHE
63
n
63
PHE
63
A
ASN
64
n
64
ASN
64
A
ASN
65
n
65
ASN
65
A
LYS
66
n
66
LYS
66
A
GLN
67
n
67
GLN
67
A
GLU
68
n
68
GLU
68
A
ARG
69
n
69
ARG
69
A
THR
70
n
70
THR
70
A
LEU
71
n
71
LEU
71
A
PHE
72
n
72
PHE
72
A
LYS
73
n
73
LYS
73
A
GLU
74
n
74
GLU
74
A
LEU
75
n
75
LEU
75
A
ILE
76
n
76
ILE
76
A
LYS
77
n
77
LYS
77
A
THR
78
n
78
THR
78
A
ASN
79
n
79
ASN
79
A
GLY
80
n
80
GLY
80
A
VAL
81
n
81
VAL
81
A
GLY
82
n
82
GLY
82
A
PRO
83
n
83
PRO
83
A
LYS
84
n
84
LYS
84
A
LEU
85
n
85
LEU
85
A
ALA
86
n
86
ALA
86
A
LEU
87
n
87
LEU
87
A
ALA
88
n
88
ALA
88
A
ILE
89
n
89
ILE
89
A
LEU
90
n
90
LEU
90
A
SER
91
n
91
SER
91
A
GLY
92
n
92
GLY
92
A
MET
93
n
93
MET
93
A
SER
94
n
94
SER
94
A
ALA
95
n
95
ALA
95
A
GLN
96
n
96
GLN
96
A
GLN
97
n
97
GLN
97
A
PHE
98
n
98
PHE
98
A
VAL
99
n
99
VAL
99
A
ASN
100
n
100
ASN
100
A
ALA
101
n
101
ALA
101
A
VAL
102
n
102
VAL
102
A
GLU
103
n
103
GLU
103
A
ARG
104
n
104
ARG
104
A
GLU
105
n
105
GLU
105
A
GLU
106
n
106
GLU
106
A
VAL
107
n
107
VAL
107
A
GLY
108
n
108
GLY
108
A
ALA
109
n
109
ALA
109
A
LEU
110
n
110
LEU
110
A
VAL
111
n
111
VAL
111
A
LYS
112
n
112
LYS
112
A
LEU
113
n
113
LEU
113
A
PRO
114
n
114
PRO
114
A
GLY
115
n
115
GLY
115
A
ILE
116
n
116
ILE
116
A
GLY
117
n
117
GLY
117
A
LYS
118
n
118
LYS
118
A
LYS
119
n
119
LYS
119
A
THR
120
n
120
THR
120
A
ALA
121
n
121
ALA
121
A
GLU
122
n
122
GLU
122
A
ARG
123
n
123
ARG
123
A
LEU
124
n
124
LEU
124
A
ILE
125
n
125
ILE
125
A
VAL
126
n
126
VAL
126
A
GLU
127
n
127
GLU
127
A
MET
128
n
128
MET
128
A
LYS
129
n
129
LYS
129
A
ASP
130
n
130
ASP
130
A
ARG
131
n
131
ARG
131
A
PHE
132
n
132
PHE
132
A
LYS
133
n
133
LYS
133
A
GLY
134
n
134
GLY
134
A
LEU
135
n
135
LEU
135
A
HIS
136
n
136
HIS
136
A
GLY
137
n
137
GLY
137
A
ASP
138
n
138
ASP
138
A
LEU
139
n
139
LEU
139
A
PHE
140
n
140
PHE
140
A
n
141
141
A
n
142
142
A
n
143
143
A
n
144
144
A
n
145
145
A
n
146
146
A
n
147
147
A
n
148
148
A
n
149
149
A
MET
1
n
1
MET
1
B
ILE
2
n
2
ILE
2
B
GLY
3
n
3
GLY
3
B
ARG
4
n
4
ARG
4
B
LEU
5
n
5
LEU
5
B
ARG
6
n
6
ARG
6
B
GLY
7
n
7
GLY
7
B
ILE
8
n
8
ILE
8
B
ILE
9
n
9
ILE
9
B
ILE
10
n
10
ILE
10
B
GLU
11
n
11
GLU
11
B
LYS
12
n
12
LYS
12
B
GLN
13
n
13
GLN
13
B
PRO
14
n
14
PRO
14
B
PRO
15
n
15
PRO
15
B
LEU
16
n
16
LEU
16
B
VAL
17
n
17
VAL
17
B
LEU
18
n
18
LEU
18
B
ILE
19
n
19
ILE
19
B
GLU
20
n
20
GLU
20
B
VAL
21
n
21
VAL
21
B
GLY
22
n
22
GLY
22
B
GLY
23
n
23
GLY
23
B
VAL
24
n
24
VAL
24
B
GLY
25
n
25
GLY
25
B
TYR
26
n
26
TYR
26
B
GLU
27
n
27
GLU
27
B
VAL
28
n
28
VAL
28
B
HIS
29
n
29
HIS
29
B
MET
30
n
30
MET
30
B
PRO
31
n
31
PRO
31
B
MET
32
n
32
MET
32
B
THR
33
n
33
THR
33
B
CYS
34
n
34
CYS
34
B
PHE
35
n
35
PHE
35
B
TYR
36
n
36
TYR
36
B
GLU
37
n
37
GLU
37
B
LEU
38
n
38
LEU
38
B
PRO
39
n
39
PRO
39
B
GLU
40
n
40
GLU
40
B
ALA
41
n
41
ALA
41
B
GLY
42
n
42
GLY
42
B
GLN
43
n
43
GLN
43
B
GLU
44
n
44
GLU
44
B
ALA
45
n
45
ALA
45
B
ILE
46
n
46
ILE
46
B
VAL
47
n
47
VAL
47
B
PHE
48
n
48
PHE
48
B
THR
49
n
49
THR
49
B
HIS
50
n
50
HIS
50
B
PHE
51
n
51
PHE
51
B
VAL
52
n
52
VAL
52
B
VAL
53
n
53
VAL
53
B
ARG
54
n
54
ARG
54
B
GLU
55
n
55
GLU
55
B
ASP
56
n
56
ASP
56
B
ALA
57
n
57
ALA
57
B
GLN
58
n
58
GLN
58
B
LEU
59
n
59
LEU
59
B
LEU
60
n
60
LEU
60
B
TYR
61
n
61
TYR
61
B
GLY
62
n
62
GLY
62
B
PHE
63
n
63
PHE
63
B
ASN
64
n
64
ASN
64
B
ASN
65
n
65
ASN
65
B
LYS
66
n
66
LYS
66
B
GLN
67
n
67
GLN
67
B
GLU
68
n
68
GLU
68
B
ARG
69
n
69
ARG
69
B
THR
70
n
70
THR
70
B
LEU
71
n
71
LEU
71
B
PHE
72
n
72
PHE
72
B
LYS
73
n
73
LYS
73
B
GLU
74
n
74
GLU
74
B
LEU
75
n
75
LEU
75
B
ILE
76
n
76
ILE
76
B
LYS
77
n
77
LYS
77
B
THR
78
n
78
THR
78
B
ASN
79
n
79
ASN
79
B
GLY
80
n
80
GLY
80
B
VAL
81
n
81
VAL
81
B
GLY
82
n
82
GLY
82
B
PRO
83
n
83
PRO
83
B
LYS
84
n
84
LYS
84
B
LEU
85
n
85
LEU
85
B
ALA
86
n
86
ALA
86
B
LEU
87
n
87
LEU
87
B
ALA
88
n
88
ALA
88
B
ILE
89
n
89
ILE
89
B
LEU
90
n
90
LEU
90
B
SER
91
n
91
SER
91
B
GLY
92
n
92
GLY
92
B
MET
93
n
93
MET
93
B
SER
94
n
94
SER
94
B
ALA
95
n
95
ALA
95
B
GLN
96
n
96
GLN
96
B
GLN
97
n
97
GLN
97
B
PHE
98
n
98
PHE
98
B
VAL
99
n
99
VAL
99
B
ASN
100
n
100
ASN
100
B
ALA
101
n
101
ALA
101
B
VAL
102
n
102
VAL
102
B
GLU
103
n
103
GLU
103
B
ARG
104
n
104
ARG
104
B
GLU
105
n
105
GLU
105
B
GLU
106
n
106
GLU
106
B
VAL
107
n
107
VAL
107
B
GLY
108
n
108
GLY
108
B
ALA
109
n
109
ALA
109
B
LEU
110
n
110
LEU
110
B
VAL
111
n
111
VAL
111
B
LYS
112
n
112
LYS
112
B
LEU
113
n
113
LEU
113
B
PRO
114
n
114
PRO
114
B
GLY
115
n
115
GLY
115
B
ILE
116
n
116
ILE
116
B
GLY
117
n
117
GLY
117
B
LYS
118
n
118
LYS
118
B
LYS
119
n
119
LYS
119
B
THR
120
n
120
THR
120
B
ALA
121
n
121
ALA
121
B
GLU
122
n
122
GLU
122
B
ARG
123
n
123
ARG
123
B
LEU
124
n
124
LEU
124
B
ILE
125
n
125
ILE
125
B
VAL
126
n
126
VAL
126
B
GLU
127
n
127
GLU
127
B
MET
128
n
128
MET
128
B
LYS
129
n
129
LYS
129
B
ASP
130
n
130
ASP
130
B
ARG
131
n
131
ARG
131
B
PHE
132
n
132
PHE
132
B
LYS
133
n
133
LYS
133
B
GLY
134
n
134
GLY
134
B
LEU
135
n
135
LEU
135
B
HIS
136
n
136
HIS
136
B
GLY
137
n
137
GLY
137
B
ASP
138
n
138
ASP
138
B
LEU
139
n
139
LEU
139
B
PHE
140
n
140
PHE
140
B
n
141
141
B
n
142
142
B
n
143
143
B
n
144
144
B
n
145
145
B
n
146
146
B
n
147
147
B
n
148
148
B
n
149
149
B
author_defined_assembly
4
tetrameric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
-1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
2_565
-x,-y+1,z
crystal symmetry operation
0.0000000000
115.6000000000
0.0000000000
A
O
GLN
13
A
O
GLN
13
A
N
LEU
16
A
N
LEU
16
A
N
VAL
21
A
N
VAL
21
A
O
VAL
24
A
O
VAL
24
A
N
HIS
29
A
N
HIS
29
A
O
LEU
60
A
O
LEU
60
A
N
PHE
63
A
N
PHE
63
A
O
PHE
48
A
O
PHE
48
A
N
VAL
47
A
N
VAL
47
A
O
LEU
5
A
O
LEU
5
B
O
GLN
13
B
O
GLN
13
B
N
LEU
16
B
N
LEU
16
B
N
VAL
21
B
N
VAL
21
B
O
VAL
24
B
O
VAL
24
B
N
HIS
29
B
N
HIS
29
B
O
LEU
60
B
O
LEU
60
B
O
PHE
63
B
O
PHE
63
B
N
PHE
48
B
N
PHE
48
B
N
VAL
47
B
N
VAL
47
B
O
LEU
5
B
O
LEU
5
1
A
THR
141
A
THR
141
1
Y
1
A
PRO
142
A
PRO
142
1
Y
1
A
ALA
143
A
ALA
143
1
Y
1
A
ALA
144
A
ALA
144
1
Y
1
A
ASP
145
A
ASP
145
1
Y
1
A
LEU
146
A
LEU
146
1
Y
1
A
VAL
147
A
VAL
147
1
Y
1
A
LEU
148
A
LEU
148
1
Y
1
A
THR
149
A
THR
149
1
Y
1
B
THR
141
B
THR
141
1
Y
1
B
PRO
142
B
PRO
142
1
Y
1
B
ALA
143
B
ALA
143
1
Y
1
B
ALA
144
B
ALA
144
1
Y
1
B
ASP
145
B
ASP
145
1
Y
1
B
LEU
146
B
LEU
146
1
Y
1
B
VAL
147
B
VAL
147
1
Y
1
B
LEU
148
B
LEU
148
1
Y
1
B
THR
149
B
THR
149
1
Y
1
A
PRO
14
-39.41
128.62
1
A
PRO
39
-49.25
156.92
1
A
ILE
116
-77.90
-77.42
1
B
PRO
14
-37.70
126.17
1
B
PRO
39
-62.51
-173.84
1
B
GLU
105
77.03
33.68
1
B
ILE
116
-85.44
-73.58
1
B
LEU
135
-171.71
-171.73
0.3200000
0.2430000
0.2470000
2.50
15.0
471
9523
RANDOM
1
0.000
2.50
15.0
22
2214
0
0
2192
57.00
2.500
40.000
1D8L
10073
1.000
0.0810000
1
17.3000
5.000
85.6
phasing
AMoRE
refinement
REFMAC
data reduction
DENZO
data scaling
CCP4
(TRUNCATE)
E. COLI HOLLIDAY JUNCTION BINDING PROTEIN RUVA NH2 REGION LACKING DOMAIN III
1
N
N
1
N
N
2
N
N
2
N
N
A
PRO
31
A
PRO
31
HELX_P
A
GLU
37
A
GLU
37
5
1
7
A
ASN
65
A
ASN
65
HELX_P
A
ILE
76
A
ILE
76
1
2
12
A
GLY
82
A
GLY
82
HELX_P
A
MET
93
A
MET
93
1
3
12
A
SER
94
A
SER
94
HELX_P
A
ARG
104
A
ARG
104
1
4
11
A
GLU
106
A
GLU
106
HELX_P
A
LEU
113
A
LEU
113
1
5
8
A
GLY
117
A
GLY
117
HELX_P
A
LYS
133
A
LYS
133
1
6
17
B
PRO
31
B
PRO
31
HELX_P
B
LEU
38
B
LEU
38
1
7
8
B
ASN
65
B
ASN
65
HELX_P
B
ILE
76
B
ILE
76
1
8
12
B
GLY
82
B
GLY
82
HELX_P
B
GLY
92
B
GLY
92
1
9
11
B
SER
94
B
SER
94
HELX_P
B
GLU
105
B
GLU
105
1
10
12
B
GLU
106
B
GLU
106
HELX_P
B
LYS
112
B
LYS
112
1
11
7
B
GLY
117
B
GLY
117
HELX_P
B
LYS
133
B
LYS
133
1
12
17
GENE REGULATION
OB-FOLD, HELIX-HAIRPIN-HELIX MOTIF, GENE REGULATION
A
PRO
14
A
PRO
14
1
A
PRO
15
A
PRO
15
6.98
B
PRO
14
B
PRO
14
1
B
PRO
15
B
PRO
15
6.68
RUVA_ECOLI
UNP
1
P0A809
1
149
1D8L
1
149
P0A809
A
1
1
149
1
149
1D8L
1
149
P0A809
B
1
1
149
6
6
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
A
ARG
4
A
ARG
4
A
GLN
13
A
GLN
13
A
LEU
16
A
LEU
16
A
VAL
21
A
VAL
21
A
VAL
24
A
VAL
24
A
HIS
29
A
HIS
29
A
ALA
57
A
ALA
57
A
PHE
63
A
PHE
63
A
GLU
44
A
GLU
44
A
ARG
54
A
ARG
54
A
ARG
4
A
ARG
4
A
GLN
13
A
GLN
13
B
ARG
4
B
ARG
4
B
GLN
13
B
GLN
13
B
LEU
16
B
LEU
16
B
VAL
21
B
VAL
21
B
VAL
24
B
VAL
24
B
HIS
29
B
HIS
29
B
ALA
57
B
ALA
57
B
PHE
63
B
PHE
63
B
GLU
44
B
GLU
44
B
ARG
54
B
ARG
54
B
ARG
4
B
ARG
4
B
GLN
13
B
GLN
13
18
P 21 21 2