50.18
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A
O5'
DG
1
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A
O5'
DG
1
1
1.00
1
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45.85
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A
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1
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A
C5'
DG
1
1
1.00
1
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44.56
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A
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1
ATOM
A
C4'
DG
1
1
1.00
1
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43.65
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A
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1
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A
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DG
1
1
1.00
1
O
43.13
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A
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1
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A
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DG
1
1
1.00
1
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45.56
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A
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1
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A
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1
1
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1
O
40.85
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A
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1
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A
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DG
1
1
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1
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40.09
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A
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1
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A
C1'
DG
1
1
1.00
1
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38.60
29.337
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A
N9
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1
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A
N9
DG
1
1
1.00
1
N
37.29
28.426
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A
C8
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1
ATOM
A
C8
DG
1
1
1.00
1
C
38.07
28.975
22.629
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A
N7
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1
ATOM
A
N7
DG
1
1
1.00
1
N
35.39
30.331
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A
C5
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1
ATOM
A
C5
DG
1
1
1.00
1
C
36.01
31.405
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A
C6
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1
ATOM
A
C6
DG
1
1
1.00
1
C
35.84
31.305
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A
O6
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1
ATOM
A
O6
DG
1
1
1.00
1
O
36.67
32.623
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A
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1
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A
N1
DG
1
1
1.00
1
N
35.97
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A
C2
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1
ATOM
A
C2
DG
1
1
1.00
1
C
36.44
33.993
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A
N2
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1
ATOM
A
N2
DG
1
1
1.00
1
N
36.23
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21.670
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A
N3
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1
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A
N3
DG
1
1
1.00
1
N
36.94
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A
C4
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1
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A
C4
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1
1
1.00
1
C
46.75
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A
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2
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A
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DG
1
2
1.00
1
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48.75
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A
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2
ATOM
A
OP1
DG
1
2
1.00
1
O
49.91
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A
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2
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A
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1
2
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1
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43.54
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A
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2
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1
2
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38.44
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A
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2
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A
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1
2
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1
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36.30
33.016
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A
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2
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A
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1
2
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1
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36.11
33.048
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A
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2
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1
2
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36.81
33.525
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A
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2
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A
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1
2
1.00
1
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38.52
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A
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2
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A
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1
2
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1
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34.52
34.494
17.290
-9.462
A
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2
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1
2
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1
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33.24
33.929
18.582
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A
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2
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A
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1
2
1.00
1
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31.89
33.231
19.298
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A
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2
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A
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1
2
1.00
1
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34.03
31.900
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-8.654
A
C8
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2
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A
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1
2
1.00
1
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34.01
31.667
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A
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2
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A
N7
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1
2
1.00
1
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33.76
32.933
20.551
-7.142
A
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2
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A
C5
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1
2
1.00
1
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33.19
33.330
21.310
-6.020
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2
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A
C6
DG
1
2
1.00
1
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34.33
32.630
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2
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A
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1
2
1.00
1
O
33.51
34.718
21.428
-5.904
A
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2
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A
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DG
1
2
1.00
1
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33.11
35.602
20.797
-6.746
A
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2
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A
C2
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1
2
1.00
1
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32.68
36.910
20.966
-6.557
A
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2
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A
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1
2
1.00
1
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34.81
35.233
20.073
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A
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2
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A
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1
2
1.00
1
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33.57
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-7.949
A
C4
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2
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A
C4
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1
2
1.00
1
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42.47
34.359
13.955
-9.131
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3
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A
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1
3
1.00
1
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41.03
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12.804
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3
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A
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1
3
1.00
1
O
40.62
33.005
13.708
-8.478
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3
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1
3
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1
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38.42
35.222
14.808
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3
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1
3
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34.49
36.454
14.429
-7.683
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3
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1
3
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1
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30.95
37.310
15.403
-7.060
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3
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1
3
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29.77
36.852
16.738
-7.154
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3
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1
3
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28.62
37.611
15.204
-5.595
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3
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1
3
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1
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29.00
38.506
14.108
-5.543
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3
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1
3
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27.34
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16.472
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3
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1
3
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24.92
37.475
17.435
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3
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1
3
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1
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22.98
36.440
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3
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A
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1
3
1.00
1
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23.73
35.075
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-5.217
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3
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A
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1
3
1.00
1
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24.71
34.490
18.590
-4.284
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3
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1
3
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1
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24.95
35.532
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-3.562
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3
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A
C5
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1
3
1.00
1
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23.33
35.500
19.964
-2.385
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3
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A
C6
DG
1
3
1.00
1
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25.24
34.433
20.316
-1.818
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3
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1
3
1.00
1
O
23.38
36.772
20.296
-1.985
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3
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1
3
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1
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23.43
37.945
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-2.587
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3
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1
3
1.00
1
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24.26
39.120
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-2.093
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3
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1
3
1.00
1
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22.65
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-3.640
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3
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1
3
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1
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23.96
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-4.086
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3
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C4
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1
3
1.00
1
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30.45
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-4.172
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4
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1
4
1.00
1
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32.13
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4
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OP1
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1
4
1.00
1
O
32.11
37.274
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-3.721
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4
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1
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O
31.04
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-3.154
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4
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27.83
40.788
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-3.008
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4
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1
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29.74
41.109
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-1.951
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4
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1
4
1.00
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27.00
40.422
16.769
-2.127
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4
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28.57
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-0.550
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4
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1
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1.00
1
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28.72
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-0.129
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4
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1
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26.21
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0.262
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4
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1
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1
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24.58
39.966
17.169
-0.808
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4
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1
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21.89
38.506
17.137
-0.791
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4
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A
N9
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1
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1.00
1
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22.91
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-1.654
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C8
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4
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C8
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1
4
1.00
1
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23.44
36.352
16.922
-1.319
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4
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N7
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1
4
1.00
1
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23.72
36.456
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-0.146
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C5
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4
ATOM
A
C5
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1
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1.00
1
C
22.61
35.455
18.194
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4
ATOM
A
C6
DG
1
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1.00
1
C
19.93
34.234
18.116
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4
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1
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O
21.69
35.995
18.856
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4
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1
4
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1
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24.13
37.335
18.977
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4
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DG
1
4
1.00
1
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24.67
37.760
19.619
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4
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1
4
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1
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24.62
38.302
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4
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1
4
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1
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23.24
37.778
17.795
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4
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1
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1.00
1
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25.02
41.306
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0.782
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5
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1
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1.00
1
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28.68
42.434
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5
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1
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22.29
39.973
12.350
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5
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1
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26.25
41.222
13.583
2.269
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5
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26.04
42.463
14.018
2.961
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5
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1
5
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28.67
42.027
14.953
4.099
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5
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1
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28.19
41.195
16.018
3.584
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5
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1
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28.41
41.164
14.280
5.156
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5
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1
5
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29.95
41.986
13.505
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5
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1
5
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27.25
40.373
15.431
5.724
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5
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1
5
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28.46
40.061
16.253
4.435
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5
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1
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27.04
38.763
15.963
3.842
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5
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A
N1
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1
5
1.00
1
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29.36
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16.456
4.546
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C2
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5
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C2
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1
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1.00
1
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30.84
37.835
17.102
5.608
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5
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1
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1.00
1
O
27.70
36.377
16.159
4.108
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5
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1
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27.33
36.244
15.442
2.999
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5
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1
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1.00
1
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24.02
35.030
15.219
2.557
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5
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N4
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1
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1.00
1
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28.48
37.374
14.910
2.273
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5
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1
5
1.00
1
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26.86
38.571
15.184
2.724
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5
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1
5
1.00
1
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32.99
41.378
12.201
6.772
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6
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1
6
1.00
1
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34.93
42.510
11.790
7.739
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6
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A
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1
6
1.00
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O
32.02
41.103
10.988
5.930
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6
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1
6
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31.72
40.081
12.726
7.528
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6
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1
6
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32.53
40.167
13.509
8.701
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6
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1
6
1.00
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32.31
38.885
14.045
9.230
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6
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A
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1
6
1.00
1
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31.24
38.291
15.012
8.362
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6
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1
6
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33.22
37.803
13.031
9.630
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6
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1
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35.00
38.160
12.413
10.893
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6
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1
6
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O
33.98
36.569
13.986
9.642
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6
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1
6
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32.42
36.856
14.742
8.340
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6
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A
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DT
1
6
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31.16
36.418
14.037
7.124
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6
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1
6
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32.12
35.075
14.108
6.781
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6
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A
C2
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1
6
1.00
1
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33.66
34.282
14.730
7.468
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6
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1
6
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O
30.08
34.691
13.442
5.659
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6
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N3
DT
1
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1
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32.29
35.518
12.714
4.813
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6
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A
C4
DT
1
6
1.00
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29.93
35.123
12.201
3.764
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6
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1
6
1.00
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O
31.65
36.917
12.655
5.238
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6
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A
C5
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1
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1.00
1
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26.52
37.948
11.935
4.443
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6
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A
C7
DT
1
6
1.00
1
C
30.79
37.254
13.270
6.342
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6
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1
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1.00
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C
34.66
37.968
10.874
11.250
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7
ATOM
A
P
DC
1
7
1.00
1
P
40.65
38.831
10.365
12.380
A
OP1
DC
7
ATOM
A
OP1
DC
1
7
1.00
1
O
36.84
38.142
10.095
9.995
A
OP2
DC
7
ATOM
A
OP2
DC
1
7
1.00
1
O
35.75
36.397
10.831
11.671
A
O5'
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7
ATOM
A
O5'
DC
1
7
1.00
1
O
32.75
35.945
11.661
12.741
A
C5'
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7
ATOM
A
C5'
DC
1
7
1.00
1
C
32.37
34.476
11.880
12.612
A
C4'
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7
ATOM
A
C4'
DC
1
7
1.00
1
C
28.03
34.180
12.628
11.451
A
O4'
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7
ATOM
A
O4'
DC
1
7
1.00
1
O
31.49
33.581
10.635
12.461
A
C3'
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7
ATOM
A
C3'
DC
1
7
1.00
1
C
37.27
33.509
10.103
13.755
A
O3'
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7
ATOM
A
O3'
DC
1
7
1.00
1
O
30.01
32.293
11.238
11.898
A
C2'
DC
7
ATOM
A
C2'
DC
1
7
1.00
1
C
27.90
32.928
12.166
10.863
A
C1'
DC
7
ATOM
A
C1'
DC
1
7
1.00
1
C
25.84
33.034
11.614
9.479
A
N1
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7
ATOM
A
N1
DC
1
7
1.00
1
N
25.63
31.925
11.798
8.654
A
C2
DC
7
ATOM
A
C2
DC
1
7
1.00
1
C
25.50
30.930
12.401
9.157
A
O2
DC
7
ATOM
A
O2
DC
1
7
1.00
1
O
26.86
31.952
11.344
7.378
A
N3
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7
ATOM
A
N3
DC
1
7
1.00
1
N
27.49
33.034
10.761
6.884
A
C4
DC
7
ATOM
A
C4
DC
1
7
1.00
1
C
23.50
33.043
10.369
5.616
A
N4
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7
ATOM
A
N4
DC
1
7
1.00
1
N
26.46
34.228
10.581
7.692
A
C5
DC
7
ATOM
A
C5
DC
1
7
1.00
1
C
26.98
34.164
11.019
8.972
A
C6
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7
ATOM
A
C6
DC
1
7
1.00
1
C
38.38
32.980
8.576
14.038
A
P
DC
8
ATOM
A
P
DC
1
8
1.00
1
P
44.85
32.811
8.557
15.516
A
OP1
DC
8
ATOM
A
OP1
DC
1
8
1.00
1
O
40.98
33.873
7.610
13.359
A
OP2
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8
ATOM
A
OP2
DC
1
8
1.00
1
O
37.16
31.534
8.592
13.329
A
O5'
DC
8
ATOM
A
O5'
DC
1
8
1.00
1
O
30.32
30.401
9.277
13.905
A
C5'
DC
8
ATOM
A
C5'
DC
1
8
1.00
1
C
28.58
29.131
8.823
13.239
A
C4'
DC
8
ATOM
A
C4'
DC
1
8
1.00
1
C
25.95
29.068
9.528
11.984
A
O4'
DC
8
ATOM
A
O4'
DC
1
8
1.00
1
O
28.38
28.941
7.351
12.818
A
C3'
DC
8
ATOM
A
C3'
DC
1
8
1.00
1
C
28.34
28.548
6.529
13.905
A
O3'
DC
8
ATOM
A
O3'
DC
1
8
1.00
1
O
26.26
27.945
7.535
11.714
A
C2'
DC
8
ATOM
A
C2'
DC
1
8
1.00
1
C
27.05
28.562
8.706
10.970
A
C1'
DC
8
ATOM
A
C1'
DC
1
8
1.00
1
C
28.62
29.529
8.369
9.896
A
N1
DC
8
ATOM
A
N1
DC
1
8
1.00
1
N
28.59
28.926
8.349
8.560
A
C2
DC
8
ATOM
A
C2
DC
1
8
1.00
1
C
25.51
27.732
8.623
8.444
A
O2
DC
8
ATOM
A
O2
DC
1
8
1.00
1
O
26.04
29.708
8.107
7.468
A
N3
DC
8
ATOM
A
N3
DC
1
8
1.00
1
N
29.10
31.005
7.895
7.653
A
C4
DC
8
ATOM
A
C4
DC
1
8
1.00
1
C
29.64
31.733
7.660
6.562
A
N4
DC
8
ATOM
A
N4
DC
1
8
1.00
1
N
26.95
31.606
7.927
8.964
A
C5
DC
8
ATOM
A
C5
DC
1
8
1.00
1
C
26.70
30.851
8.201
10.021
A
C6
DC
8
ATOM
A
C6
DC
1
8
1.00
1
C
34.68
26.227
6.651
-1.959
B
O5'
DG
9
ATOM
B
O5'
DG
1
1
1.00
1
O
29.60
24.819
6.514
-1.981
B
C5'
DG
9
ATOM
B
C5'
DG
1
1
1.00
1
C
29.89
24.320
6.619
-0.580
B
C4'
DG
9
ATOM
B
C4'
DG
1
1
1.00
1
C
29.03
24.851
5.605
0.275
B
O4'
DG
9
ATOM
B
O4'
DG
1
1
1.00
1
O
28.21
24.654
7.958
0.103
B
C3'
DG
9
ATOM
B
C3'
DG
1
1
1.00
1
C
30.23
23.875
8.941
-0.559
B
O3'
DG
9
ATOM
B
O3'
DG
1
1
1.00
1
O
26.50
24.295
7.508
1.500
B
C2'
DG
9
ATOM
B
C2'
DG
1
1
1.00
1
C
27.39
25.011
6.165
1.577
B
C1'
DG
9
ATOM
B
C1'
DG
1
1
1.00
1
C
28.40
26.426
6.314
1.934
B
N9
DG
9
ATOM
B
N9
DG
1
1
1.00
1
N
30.76
27.581
6.106
1.207
B
C8
DG
9
ATOM
B
C8
DG
1
1
1.00
1
C
31.06
28.684
6.357
1.839
B
N7
DG
9
ATOM
B
N7
DG
1
1
1.00
1
N
31.73
28.230
6.807
3.085
B
C5
DG
9
ATOM
B
C5
DG
1
1
1.00
1
C
31.28
28.966
7.206
4.250
B
C6
DG
9
ATOM
B
C6
DG
1
1
1.00
1
C
31.89
30.205
7.253
4.361
B
O6
DG
9
ATOM
B
O6
DG
1
1
1.00
1
O
29.97
28.128
7.500
5.294
B
N1
DG
9
ATOM
B
N1
DG
1
1
1.00
1
N
31.16
26.772
7.461
5.264
B
C2
DG
9
ATOM
B
C2
DG
1
1
1.00
1
C
29.62
26.085
7.821
6.368
B
N2
DG
9
ATOM
B
N2
DG
1
1
1.00
1
N
31.03
26.069
7.073
4.202
B
N3
DG
9
ATOM
B
N3
DG
1
1
1.00
1
N
29.90
26.871
6.733
3.175
B
C4
DG
9
ATOM
B
C4
DG
1
1
1.00
1
C
31.99
24.257
10.502
-0.606
B
P
DG
10
ATOM
B
P
DG
1
2
1.00
1
P
32.37
23.291
11.258
-1.401
B
OP1
DG
10
ATOM
B
OP1
DG
1
2
1.00
1
O
36.51
25.689
10.675
-0.993
B
OP2
DG
10
ATOM
B
OP2
DG
1
2
1.00
1
O
33.71
24.175
10.902
0.984
B
O5'
DG
10
ATOM
B
O5'
DG
1
2
1.00
1
O
32.63
22.923
11.254
1.581
B
C5'
DG
10
ATOM
B
C5'
DG
1
2
1.00
1
C
34.41
23.032
11.434
3.081
B
C4'
DG
10
ATOM
B
C4'
DG
1
2
1.00
1
C
33.08
23.682
10.338
3.768
B
O4'
DG
10
ATOM
B
O4'
DG
1
2
1.00
1
O
31.46
23.795
12.687
3.532
B
C3'
DG
10
ATOM
B
C3'
DG
1
2
1.00
1
C
31.80
22.964
13.837
3.369
B
O3'
DG
10
ATOM
B
O3'
DG
1
2
1.00
1
O
28.43
24.166
12.373
4.950
B
C2'
DG
10
ATOM
B
C2'
DG
1
2
1.00
1
C
28.55
24.571
10.937
4.774
B
C1'
DG
10
ATOM
B
C1'
DG
1
2
1.00
1
C
28.76
25.976
10.788
4.374
B
N9
DG
10
ATOM
B
N9
DG
1
2
1.00
1
N
27.65
26.546
10.397
3.184
B
C8
DG
10
ATOM
B
C8
DG
1
2
1.00
1
C
26.34
27.830
10.373
3.193
B
N7
DG
10
ATOM
B
N7
DG
1
2
1.00
1
N
26.50
28.164
10.819
4.477
B
C5
DG
10
ATOM
B
C5
DG
1
2
1.00
1
C
26.78
29.443
11.000
5.062
B
C6
DG
10
ATOM
B
C6
DG
1
2
1.00
1
C
23.97
30.560
10.796
4.516
B
O6
DG
10
ATOM
B
O6
DG
1
2
1.00
1
O
25.89
29.330
11.422
6.381
B
N1
DG
10
ATOM
B
N1
DG
1
2
1.00
1
N
27.38
28.137
11.618
7.030
B
C2
DG
10
ATOM
B
C2
DG
1
2
1.00
1
C
27.52
28.223
12.002
8.319
B
N2
DG
10
ATOM
B
N2
DG
1
2
1.00
1
N
24.41
26.964
11.473
6.476
B
N3
DG
10
ATOM
B
N3
DG
1
2
1.00
1
N
26.77
27.050
11.035
5.229
B
C4
DG
10
ATOM
B
C4
DG
1
2
1.00
1
C
32.98
23.694
15.141
2.746
B
P
DG
11
ATOM
B
P
DG
1
3
1.00
1
P
37.95
22.706
16.186
2.342
B
OP1
DG
11
ATOM
B
OP1
DG
1
3
1.00
1
O
32.88
24.815
14.883
1.796
B
OP2
DG
11
ATOM
B
OP2
DG
1
3
1.00
1
O
35.84
24.478
15.630
4.112
B
O5'
DG
11
ATOM
B
O5'
DG
1
3
1.00
1
O
36.05
23.624
16.006
5.255
B
C5'
DG
11
ATOM
B
C5'
DG
1
3
1.00
1
C
36.25
24.620
16.206
6.360
B
C4'
DG
11
ATOM
B
C4'
DG
1
3
1.00
1
C
36.21
25.344
14.992
6.570
B
O4'
DG
11
ATOM
B
O4'
DG
1
3
1.00
1
O
36.27
25.737
17.247
6.179
B
C3'
DG
11
ATOM
B
C3'
DG
1
3
1.00
1
C
37.69
25.170
18.511
6.299
B
O3'
DG
11
ATOM
B
O3'
DG
1
3
1.00
1
O
35.53
26.589
16.844
7.365
B
C2'
DG
11
ATOM
B
C2'
DG
1
3
1.00
1
C
33.10
26.616
15.341
7.107
B
C1'
DG
11
ATOM
B
C1'
DG
1
3
1.00
1
C
31.39
27.714
14.918
6.231
B
N9
DG
11
ATOM
B
N9
DG
1
3
1.00
1
N
31.70
27.730
14.460
4.959
B
C8
DG
11
ATOM
B
C8
DG
1
3
1.00
1
C
29.92
28.892
14.131
4.520
B
N7
DG
11
ATOM
B
N7
DG
1
3
1.00
1
N
31.14
29.735
14.425
5.569
B
C5
DG
11
ATOM
B
C5
DG
1
3
1.00
1
C
31.38
31.152
14.303
5.663
B
C6
DG
11
ATOM
B
C6
DG
1
3
1.00
1
C
33.36
31.931
13.869
4.800
B
O6
DG
11
ATOM
B
O6
DG
1
3
1.00
1
O
29.94
31.613
14.687
6.905
B
N1
DG
11
ATOM
B
N1
DG
1
3
1.00
1
N
31.26
30.822
15.164
7.915
B
C2
DG
11
ATOM
B
C2
DG
1
3
1.00
1
C
31.25
31.507
15.466
9.054
B
N2
DG
11
ATOM
B
N2
DG
1
3
1.00
1
N
28.29
29.531
15.294
7.833
B
N3
DG
11
ATOM
B
N3
DG
1
3
1.00
1
N
30.95
29.036
14.867
6.656
B
C4
DG
11
ATOM
B
C4
DG
1
3
1.00
1
C
40.81
25.820
19.905
5.969
B
P
DG
12
ATOM
B
P
DG
1
4
1.00
1
P
42.75
24.849
20.946
6.411
B
OP1
DG
12
ATOM
B
OP1
DG
1
4
1.00
1
O
42.29
26.107
19.838
4.495
B
OP2
DG
12
ATOM
B
OP2
DG
1
4
1.00
1
O
38.30
27.231
20.194
6.725
B
O5'
DG
12
ATOM
B
O5'
DG
1
4
1.00
1
O
32.09
27.224
20.175
8.164
B
C5'
DG
12
ATOM
B
C5'
DG
1
4
1.00
1
C
30.81
28.546
20.421
8.774
B
C4'
DG
12
ATOM
B
C4'
DG
1
4
1.00
1
C
31.22
29.149
19.102
8.899
B
O4'
DG
12
ATOM
B
O4'
DG
1
4
1.00
1
O
29.71
29.572
21.306
8.070
B
C3'
DG
12
ATOM
B
C3'
DG
1
4
1.00
1
C
34.25
29.353
22.680
8.392
B
O3'
DG
12
ATOM
B
O3'
DG
1
4
1.00
1
O
29.23
30.860
20.758
8.585
B
C2'
DG
12
ATOM
B
C2'
DG
1
4
1.00
1
C
30.76
30.555
19.251
8.568
B
C1'
DG
12
ATOM
B
C1'
DG
1
4
1.00
1
C
30.78
30.858
18.680
7.258
B
N9
DG
12
ATOM
B
N9
DG
1
4
1.00
1
N
30.00
29.986
18.492
6.201
B
C8
DG
12
ATOM
B
C8
DG
1
4
1.00
1
C
31.71
30.546
17.952
5.208
B
N7
DG
12
ATOM
B
N7
DG
1
4
1.00
1
N
31.72
31.904
17.822
5.535
B
C5
DG
12
ATOM
B
C5
DG
1
4
1.00
1
C
31.70
32.987
17.302
4.770
B
C6
DG
12
ATOM
B
C6
DG
1
4
1.00
1
C
29.83
32.971
16.899
3.601
B
O6
DG
12
ATOM
B
O6
DG
1
4
1.00
1
O
32.61
34.187
17.337
5.483
B
N1
DG
12
ATOM
B
N1
DG
1
4
1.00
1
N
31.90
34.300
17.814
6.772
B
C2
DG
12
ATOM
B
C2
DG
1
4
1.00
1
C
32.18
35.538
17.783
7.301
B
N2
DG
12
ATOM
B
N2
DG
1
4
1.00
1
N
32.94
33.278
18.269
7.503
B
N3
DG
12
ATOM
B
N3
DG
1
4
1.00
1
N
32.03
32.103
18.253
6.811
B
C4
DG
12
ATOM
B
C4
DG
1
4
1.00
1
C
35.48
29.411
23.807
7.228
B
P
DC
13
ATOM
B
P
DC
1
5
1.00
1
P
37.87
28.980
25.087
7.752
B
OP1
DC
13
ATOM
B
OP1
DC
1
5
1.00
1
O
37.24
28.686
23.350
6.033
B
OP2
DC
13
ATOM
B
OP2
DC
1
5
1.00
1
O
35.08
31.000
23.913
6.905
B
O5'
DC
13
ATOM
B
O5'
DC
1
5
1.00
1
O
31.96
31.830
24.348
8.001
B
C5'
DC
13
ATOM
B
C5'
DC
1
5
1.00
1
C
32.38
33.249
24.160
7.601
B
C4'
DC
13
ATOM
B
C4'
DC
1
5
1.00
1
C
33.31
33.382
22.723
7.447
B
O4'
DC
13
ATOM
B
O4'
DC
1
5
1.00
1
O
32.21
33.767
24.704
6.287
B
C3'
DC
13
ATOM
B
C3'
DC
1
5
1.00
1
C
34.59
34.248
26.015
6.506
B
O3'
DC
13
ATOM
B
O3'
DC
1
5
1.00
1
O
30.63
34.921
23.761
5.977
B
C2'
DC
13
ATOM
B
C2'
DC
1
5
1.00
1
C
30.79
34.277
22.426
6.385
B
C1'
DC
13
ATOM
B
C1'
DC
1
5
1.00
1
C
28.69
33.638
21.670
5.272
B
N1
DC
13
ATOM
B
N1
DC
1
5
1.00
1
N
30.09
34.582
20.934
4.490
B
C2
DC
13
ATOM
B
C2
DC
1
5
1.00
1
C
27.77
35.801
20.962
4.791
B
O2
DC
13
ATOM
B
O2
DC
1
5
1.00
1
O
30.22
34.117
20.214
3.429
B
N3
DC
13
ATOM
B
N3
DC
1
5
1.00
1
N
29.57
32.838
20.245
3.128
B
C4
DC
13
ATOM
B
C4
DC
1
5
1.00
1
C
29.49
32.444
19.525
2.088
B
N4
DC
13
ATOM
B
N4
DC
1
5
1.00
1
N
30.30
31.902
21.005
3.919
B
C5
DC
13
ATOM
B
C5
DC
1
5
1.00
1
C
28.30
32.331
21.694
4.954
B
C6
DC
13
ATOM
B
C6
DC
1
5
1.00
1
C
35.03
34.304
27.021
5.255
B
P
DT
14
ATOM
B
P
DT
1
6
1.00
1
P
40.98
34.829
28.336
5.848
B
OP1
DT
14
ATOM
B
OP1
DT
1
6
1.00
1
O
31.37
32.928
27.088
4.684
B
OP2
DT
14
ATOM
B
OP2
DT
1
6
1.00
1
O
33.70
35.468
26.555
4.301
B
O5'
DT
14
ATOM
B
O5'
DT
1
6
1.00
1
O
31.37
36.838
26.422
4.727
B
C5'
DT
14
ATOM
B
C5'
DT
1
6
1.00
1
C
32.43
37.498
25.530
3.674
B
C4'
DT
14
ATOM
B
C4'
DT
1
6
1.00
1
C
32.52
36.804
24.281
3.640
B
O4'
DT
14
ATOM
B
O4'
DT
1
6
1.00
1
O
31.98
37.468
25.957
2.209
B
C3'
DT
14
ATOM
B
C3'
DT
1
6
1.00
1
C
35.94
38.413
26.959
1.904
B
O3'
DT
14
ATOM
B
O3'
DT
1
6
1.00
1
O
32.16
37.762
24.649
1.470
B
C2'
DT
14
ATOM
B
C2'
DT
1
6
1.00
1
C
31.15
36.854
23.725
2.260
B
C1'
DT
14
ATOM
B
C1'
DT
1
6
1.00
1
C
28.93
35.532
23.447
1.693
B
N1
DT
14
ATOM
B
N1
DT
1
6
1.00
1
N
29.81
35.473
22.437
0.735
B
C2
DT
14
ATOM
B
C2
DT
1
6
1.00
1
C
27.98
36.368
21.827
0.254
B
O2
DT
14
ATOM
B
O2
DT
1
6
1.00
1
O
28.94
34.219
22.128
0.254
B
N3
DT
14
ATOM
B
N3
DT
1
6
1.00
1
N
28.35
33.046
22.743
0.614
B
C4
DT
14
ATOM
B
C4
DT
1
6
1.00
1
C
31.86
32.040
22.371
0.039
B
O4
DT
14
ATOM
B
O4
DT
1
6
1.00
1
O
30.21
33.159
23.753
1.633
B
C5
DT
14
ATOM
B
C5
DT
1
6
1.00
1
C
26.57
31.954
24.477
2.166
B
C7
DT
14
ATOM
B
C7
DT
1
6
1.00
1
C
30.11
34.368
24.062
2.101
B
C6
DT
14
ATOM
B
C6
DT
1
6
1.00
1
C
35.09
38.259
27.898
0.541
B
P
DC
15
ATOM
B
P
DC
1
7
1.00
1
P
38.26
39.163
29.049
0.838
B
OP1
DC
15
ATOM
B
OP1
DC
1
7
1.00
1
O
35.61
36.793
28.129
0.314
B
OP2
DC
15
ATOM
B
OP2
DC
1
7
1.00
1
O
34.33
38.831
26.931
-0.563
B
O5'
DC
15
ATOM
B
O5'
DC
1
7
1.00
1
O
32.94
40.244
26.849
-0.804
B
C5'
DC
15
ATOM
B
C5'
DC
1
7
1.00
1
C
31.99
40.431
25.898
-1.925
B
C4'
DC
15
ATOM
B
C4'
DC
1
7
1.00
1
C
34.51
39.778
24.657
-1.637
B
O4'
DC
15
ATOM
B
O4'
DC
1
7
1.00
1
O
32.21
39.803
26.305
-3.249
B
C3'
DC
15
ATOM
B
C3'
DC
1
7
1.00
1
C
29.25
40.603
27.213
-3.863
B
O3'
DC
15
ATOM
B
O3'
DC
1
7
1.00
1
O
33.36
39.844
24.935
-3.979
B
C2'
DC
15
ATOM
B
C2'
DC
1
7
1.00
1
C
31.74
39.213
24.132
-2.836
B
C1'
DC
15
ATOM
B
C1'
DC
1
7
1.00
1
C
31.72
37.742
24.121
-2.879
B
N1
DC
15
ATOM
B
N1
DC
1
7
1.00
1
N
28.20
37.159
23.158
-3.713
B
C2
DC
15
ATOM
B
C2
DC
1
7
1.00
1
C
27.12
37.934
22.465
-4.361
B
O2
DC
15
ATOM
B
O2
DC
1
7
1.00
1
O
29.14
35.816
23.048
-3.803
B
N3
DC
15
ATOM
B
N3
DC
1
7
1.00
1
N
31.48
35.052
23.862
-3.059
B
C4
DC
15
ATOM
B
C4
DC
1
7
1.00
1
C
30.99
33.715
23.792
-3.090
B
N4
DC
15
ATOM
B
N4
DC
1
7
1.00
1
N
31.78
35.629
24.853
-2.179
B
C5
DC
15
ATOM
B
C5
DC
1
7
1.00
1
C
32.20
36.940
24.978
-2.148
B
C6
DC
15
ATOM
B
C6
DC
1
7
1.00
1
C
29.84
40.343
28.039
-5.204
B
P
DC
16
ATOM
B
P
DC
1
8
1.00
1
P
28.89
41.640
28.736
-5.427
B
OP1
DC
16
ATOM
B
OP1
DC
1
8
1.00
1
O
25.17
39.098
28.826
-5.010
B
OP2
DC
16
ATOM
B
OP2
DC
1
8
1.00
1
O
32.04
40.063
27.006
-6.437
B
O5'
DC
16
ATOM
B
O5'
DC
1
8
1.00
1
O
33.43
41.105
26.430
-7.232
B
C5'
DC
16
ATOM
B
C5'
DC
1
8
1.00
1
C
35.01
40.619
25.510
-8.306
B
C4'
DC
16
ATOM
B
C4'
DC
1
8
1.00
1
C
32.52
39.575
24.657
-7.825
B
O4'
DC
16
ATOM
B
O4'
DC
1
8
1.00
1
O
34.67
40.067
26.144
-9.587
B
C3'
DC
16
ATOM
B
C3'
DC
1
8
1.00
1
C
37.20
40.700
25.440
-10.661
B
O3'
DC
16
ATOM
B
O3'
DC
1
8
1.00
1
O
33.17
38.583
25.874
-9.574
B
C2'
DC
16
ATOM
B
C2'
DC
1
8
1.00
1
C
31.42
38.413
24.727
-8.611
B
C1'
DC
16
ATOM
B
C1'
DC
1
8
1.00
1
C
32.77
37.177
24.841
-7.821
B
N1
DC
16
ATOM
B
N1
DC
1
8
1.00
1
N
32.04
36.045
24.148
-8.371
B
C2
DC
16
ATOM
B
C2
DC
1
8
1.00
1
C
30.91
36.182
23.510
-9.428
B
O2
DC
16
ATOM
B
O2
DC
1
8
1.00
1
O
29.47
34.847
24.179
-7.747
B
N3
DC
16
ATOM
B
N3
DC
1
8
1.00
1
N
30.61
34.745
24.880
-6.617
B
C4
DC
16
ATOM
B
C4
DC
1
8
1.00
1
C
31.63
33.538
24.857
-6.050
B
N4
DC
16
ATOM
B
N4
DC
1
8
1.00
1
N
31.06
35.848
25.577
-6.042
B
C5
DC
16
ATOM
B
C5
DC
1
8
1.00
1
C
32.59
37.021
25.534
-6.669
B
C6
DC
16
ATOM
B
C6
DC
1
8
1.00
1
C
48.42
37.939
17.783
-9.587
A
O
HOH
21
HETATM
C
O
HOH
2
1.00
1
O
55.45
43.846
13.603
9.763
A
O
HOH
23
HETATM
C
O
HOH
2
1.00
1
O
42.29
25.262
9.402
13.050
A
O
HOH
24
HETATM
C
O
HOH
2
1.00
1
O
28.99
40.526
19.721
2.544
A
O
HOH
26
HETATM
C
O
HOH
2
1.00
1
O
30.05
37.541
12.648
-0.812
A
O
HOH
29
HETATM
C
O
HOH
2
1.00
1
O
49.96
45.388
12.287
0.335
A
O
HOH
30
HETATM
C
O
HOH
2
1.00
1
O
73.66
34.872
15.399
-3.201
A
O
HOH
31
HETATM
C
O
HOH
2
1.00
1
O
60.93
28.442
24.876
-7.876
A
O
HOH
34
HETATM
C
O
HOH
2
1.00
1
O
76.35
30.383
12.761
-9.406
A
O
HOH
35
HETATM
C
O
HOH
2
1.00
1
O
52.43
38.076
9.512
7.051
A
O
HOH
36
HETATM
C
O
HOH
2
1.00
1
O
52.10
35.100
13.172
0.219
A
O
HOH
37
HETATM
C
O
HOH
2
1.00
1
O
67.43
39.887
9.539
1.225
A
O
HOH
39
HETATM
C
O
HOH
2
1.00
1
O
77.32
26.505
13.137
-9.960
A
O
HOH
42
HETATM
C
O
HOH
2
1.00
1
O
67.33
31.373
12.025
-11.980
A
O
HOH
46
HETATM
C
O
HOH
2
1.00
1
O
41.59
30.051
5.891
16.561
A
O
HOH
49
HETATM
C
O
HOH
2
1.00
1
O
52.36
29.977
21.639
-5.775
A
O
HOH
52
HETATM
C
O
HOH
2
1.00
1
O
77.86
25.936
17.443
-8.456
A
O
HOH
54
HETATM
C
O
HOH
2
1.00
1
O
42.91
22.681
14.930
-7.700
A
O
HOH
55
HETATM
C
O
HOH
2
1.00
1
O
51.02
29.095
19.893
-3.910
A
O
HOH
57
HETATM
C
O
HOH
2
1.00
1
O
52.42
31.590
18.633
-4.340
A
O
HOH
58
HETATM
C
O
HOH
2
1.00
1
O
57.07
24.464
15.442
-9.625
A
O
HOH
59
HETATM
C
O
HOH
2
1.00
1
O
59.77
37.369
7.535
13.871
A
O
HOH
60
HETATM
C
O
HOH
2
1.00
1
O
85.13
31.821
18.249
-1.358
A
O
HOH
62
HETATM
C
O
HOH
2
1.00
1
O
67.54
38.036
10.514
19.891
A
O
HOH
64
HETATM
C
O
HOH
2
1.00
1
O
69.10
37.120
10.220
16.634
A
O
HOH
65
HETATM
C
O
HOH
2
1.00
1
O
70.61
25.707
13.243
-7.498
A
O
HOH
66
HETATM
C
O
HOH
2
1.00
1
O
53.72
25.235
10.115
9.969
A
O
HOH
67
HETATM
C
O
HOH
2
1.00
1
O
59.22
26.928
20.195
-6.901
A
O
HOH
68
HETATM
C
O
HOH
2
1.00
1
O
42.74
28.460
17.775
2.862
B
O
HOH
17
HETATM
D
O
HOH
2
1.00
1
O
56.55
33.821
27.327
-0.370
B
O
HOH
18
HETATM
D
O
HOH
2
1.00
1
O
13.17
23.414
7.586
7.193
B
O
HOH
19
HETATM
D
O
HOH
2
1.00
1
O
61.44
38.555
29.953
-2.570
B
O
HOH
20
HETATM
D
O
HOH
2
1.00
1
O
53.19
32.406
11.708
2.320
B
O
HOH
22
HETATM
D
O
HOH
2
1.00
1
O
78.16
28.553
21.576
4.086
B
O
HOH
25
HETATM
D
O
HOH
2
1.00
1
O
69.00
29.131
13.810
1.323
B
O
HOH
27
HETATM
D
O
HOH
2
1.00
1
O
37.89
30.756
15.881
2.157
B
O
HOH
28
HETATM
D
O
HOH
2
1.00
1
O
56.92
31.733
25.416
-1.590
B
O
HOH
32
HETATM
D
O
HOH
2
1.00
1
O
81.51
44.714
28.775
-5.620
B
O
HOH
33
HETATM
D
O
HOH
2
1.00
1
O
57.88
22.941
10.377
-3.884
B
O
HOH
38
HETATM
D
O
HOH
2
1.00
1
O
52.29
29.299
20.206
0.898
B
O
HOH
40
HETATM
D
O
HOH
2
1.00
1
O
75.26
20.218
16.057
-0.507
B
O
HOH
41
HETATM
D
O
HOH
2
1.00
1
O
58.82
31.274
20.872
-2.015
B
O
HOH
43
HETATM
D
O
HOH
2
1.00
1
O
73.45
25.899
19.384
1.513
B
O
HOH
44
HETATM
D
O
HOH
2
1.00
1
O
78.42
33.920
27.718
-4.121
B
O
HOH
45
HETATM
D
O
HOH
2
1.00
1
O
54.41
21.759
13.520
-1.650
B
O
HOH
47
HETATM
D
O
HOH
2
1.00
1
O
59.30
31.572
13.270
0.292
B
O
HOH
48
HETATM
D
O
HOH
2
1.00
1
O
54.03
24.867
12.201
8.035
B
O
HOH
50
HETATM
D
O
HOH
2
1.00
1
O
51.48
36.422
28.708
-4.117
B
O
HOH
51
HETATM
D
O
HOH
2
1.00
1
O
55.03
28.173
16.221
10.072
B
O
HOH
53
HETATM
D
O
HOH
2
1.00
1
O
74.74
22.048
9.848
8.576
B
O
HOH
56
HETATM
D
O
HOH
2
1.00
1
O
55.15
33.335
28.286
2.114
B
O
HOH
61
HETATM
D
O
HOH
2
1.00
1
O
46.05
38.610
20.786
6.256
B
O
HOH
63
HETATM
D
O
HOH
2
1.00
1
O
0.022124
0.012773
0.000000
0.000000
0.025546
0.000000
0.000000
0.000000
0.023272
0.00000
0.00000
0.00000
Hunter, W.N.
Kneale, G.
Brown, T.
Rabinovich, D.
Kennard, O.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
45.200
45.200
42.970
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
C10 H15 N2 O8 P
322.208
y
THYMIDINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
N
1
N
O
N
2
N
P
N
3
N
O
N
4
N
O
N
5
N
O
N
6
N
C
N
7
R
C
N
8
N
O
N
9
S
C
N
10
N
O
N
11
N
C
N
12
R
C
N
13
N
N
N
14
N
C
N
15
N
O
N
16
N
N
N
17
N
C
N
18
N
N
N
19
N
C
N
20
N
C
N
21
N
H
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
H
N
35
N
O
N
36
N
P
N
37
N
O
N
38
N
O
N
39
N
O
N
40
N
C
N
41
R
C
N
42
N
O
N
43
S
C
N
44
N
O
N
45
N
C
N
46
R
C
Y
47
N
N
Y
48
N
C
Y
49
N
N
Y
50
N
C
N
51
N
C
N
52
N
O
N
53
N
N
N
54
N
C
N
55
N
N
N
56
N
N
Y
57
N
C
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
H
N
71
N
H
N
72
N
O
N
73
N
P
N
74
N
O
N
75
N
O
N
76
N
O
N
77
N
C
N
78
R
C
N
79
N
O
N
80
S
C
N
81
N
O
N
82
N
C
N
83
R
C
N
84
N
N
N
85
N
C
N
86
N
O
N
87
N
N
N
88
N
C
N
89
N
O
N
90
N
C
N
91
N
C
N
92
N
C
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
H
N
105
N
H
N
106
N
H
N
107
N
H
N
108
N
O
N
109
N
H
N
110
N
H
N
1
N
sing
N
2
N
sing
N
3
N
doub
N
4
N
sing
N
5
N
sing
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
sing
N
10
N
sing
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
doub
N
27
N
sing
N
28
N
doub
N
29
N
sing
N
30
N
sing
N
31
N
sing
N
32
N
sing
N
33
N
doub
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
sing
N
38
N
doub
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
N
58
N
sing
Y
59
N
sing
Y
60
N
sing
Y
61
N
doub
N
62
N
sing
Y
63
N
sing
N
64
N
sing
Y
65
N
doub
N
66
N
doub
N
67
N
sing
N
68
N
sing
N
69
N
sing
N
70
N
sing
N
71
N
doub
N
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
sing
N
76
N
sing
N
77
N
doub
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
sing
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
doub
N
105
N
sing
N
106
N
sing
N
107
N
doub
N
108
N
sing
N
109
N
sing
N
110
N
sing
N
111
N
sing
N
112
N
sing
N
113
N
sing
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
190
605
618
10.1016/0022-2836(86)90246-9
3783714
Refined crystal structure of an octanucleotide duplex with G . T mismatched base-pairs.
1986
UK
Nature
NATUAS
0006
0028-0836
315
604
606
High-Resolution Structure of a DNA Helix Containing Mismatched Base Pairs
1985
US
J.Biomol.Struct.Dyn.
JBSDD6
0646
0739-1102
3
205
226
Structural Studies of DNA Fragments. The G.T Wobble Base Pair in A, B and Z DNA. The G.A Base Pair in B-DNA
1985
10.2210/pdb1d92/pdb
pdb_00001d92
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
275.00
1
DIFFRACTOMETER
SYNTEX P21
x-ray
1
1.0
2443.604
DNA (5'-D(*GP*GP*GP*GP*CP*TP*CP*C)-3')
2
syn
polymer
18.015
water
52
nat
water
no
no
(DG)(DG)(DG)(DG)(DC)(DT)(DC)(DC)
GGGGCTCC
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
2.59
52.56
VAPOR DIFFUSION
6.50
pH 6.50, VAPOR DIFFUSION, temperature 277.00K
277.00
WATER
1
NA CACODYLATE
1
MGCL2
1
WATER
2
-11.458
1
19
A
1
B
16
-3.331
A_DG1:DC16_B
1
1.987
-0.546
-0.206
-0.023
-12.300
1
19
A
2
B
15
1.506
A_DG2:DC15_B
2
-6.217
-0.158
-0.319
-0.083
-9.140
28
A
3
B
14
-5.224
A_DG3:DT14_B
3
-9.231
-2.581
-0.272
-0.727
-7.361
1
19
A
4
B
13
-3.252
A_DG4:DC13_B
4
-3.208
-0.124
-0.052
-0.186
-2.808
1
19
A
5
B
12
-4.488
A_DC5:DG12_B
5
-16.414
0.188
0.341
-0.200
0.949
1
28
A
6
B
11
1.972
A_DT6:DG11_B
6
-14.018
2.138
0.170
-0.508
15.218
1
19
A
7
B
10
-2.294
A_DC7:DG10_B
7
-13.015
0.656
-0.203
-0.354
15.515
1
19
A
8
B
9
-1.211
A_DC8:DG9_B
8
-7.443
0.501
-0.352
-0.325
2.186
34.127
A
A
1
2
23.871
B
B
16
15
3.268
13.636
0.448
-2.153
AA_DG1DG2:DC15DC16_BB
1
1.303
-2.281
31.333
-5.553
-0.583
2.967
20.447
A
A
2
3
8.079
B
B
15
14
3.312
2.854
0.109
-2.078
AA_DG2DG3:DT14DC15_BB
2
-1.986
5.622
20.152
-7.086
-1.162
3.252
42.987
A
A
3
4
4.908
B
B
14
13
3.314
3.581
-0.665
-1.402
AA_DG3DG4:DC13DT14_BB
3
-6.242
8.555
42.408
-2.272
0.283
3.132
31.052
A
A
4
5
9.920
B
B
13
12
3.322
5.271
-0.722
-1.257
AA_DG4DC5:DG12DC13_BB
4
-4.098
7.712
30.343
-3.359
0.564
3.226
43.702
A
A
5
6
1.399
B
B
12
11
3.217
1.040
0.743
-1.376
AA_DC5DT6:DG11DG12_BB
5
2.949
-3.965
43.595
-1.947
-0.720
2.008
23.214
A
A
6
7
17.602
B
B
11
10
2.774
6.918
-0.235
-1.770
AA_DT6DC7:DG10DG11_BB
6
5.145
-13.092
21.574
-6.211
1.933
2.920
33.507
A
A
7
8
14.990
B
B
10
9
3.420
8.550
0.145
-1.594
AA_DC7DC8:DG9DG10_BB
7
1.042
-1.828
32.411
-4.153
-0.083
chem_comp_atom
chem_comp_bond
database_2
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
1993-07-15
1
1
2008-05-22
1
2
2011-07-13
1
3
2024-02-07
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
BNL
Y
NDB
1992-10-17
REL
HOH
water
HOH
21
2
HOH
HOH
21
A
HOH
23
2
HOH
HOH
23
A
HOH
24
2
HOH
HOH
24
A
HOH
26
2
HOH
HOH
26
A
HOH
29
2
HOH
HOH
29
A
HOH
30
2
HOH
HOH
30
A
HOH
31
2
HOH
HOH
31
A
HOH
34
2
HOH
HOH
34
A
HOH
35
2
HOH
HOH
35
A
HOH
36
2
HOH
HOH
36
A
HOH
37
2
HOH
HOH
37
A
HOH
39
2
HOH
HOH
39
A
HOH
42
2
HOH
HOH
42
A
HOH
46
2
HOH
HOH
46
A
HOH
49
2
HOH
HOH
49
A
HOH
52
2
HOH
HOH
52
A
HOH
54
2
HOH
HOH
54
A
HOH
55
2
HOH
HOH
55
A
HOH
57
2
HOH
HOH
57
A
HOH
58
2
HOH
HOH
58
A
HOH
59
2
HOH
HOH
59
A
HOH
60
2
HOH
HOH
60
A
HOH
62
2
HOH
HOH
62
A
HOH
64
2
HOH
HOH
64
A
HOH
65
2
HOH
HOH
65
A
HOH
66
2
HOH
HOH
66
A
HOH
67
2
HOH
HOH
67
A
HOH
68
2
HOH
HOH
68
A
HOH
17
2
HOH
HOH
17
B
HOH
18
2
HOH
HOH
18
B
HOH
19
2
HOH
HOH
19
B
HOH
20
2
HOH
HOH
20
B
HOH
22
2
HOH
HOH
22
B
HOH
25
2
HOH
HOH
25
B
HOH
27
2
HOH
HOH
27
B
HOH
28
2
HOH
HOH
28
B
HOH
32
2
HOH
HOH
32
B
HOH
33
2
HOH
HOH
33
B
HOH
38
2
HOH
HOH
38
B
HOH
40
2
HOH
HOH
40
B
HOH
41
2
HOH
HOH
41
B
HOH
43
2
HOH
HOH
43
B
HOH
44
2
HOH
HOH
44
B
HOH
45
2
HOH
HOH
45
B
HOH
47
2
HOH
HOH
47
B
HOH
48
2
HOH
HOH
48
B
HOH
50
2
HOH
HOH
50
B
HOH
51
2
HOH
HOH
51
B
HOH
53
2
HOH
HOH
53
B
HOH
56
2
HOH
HOH
56
B
HOH
61
2
HOH
HOH
61
B
HOH
63
2
HOH
HOH
63
B
G
1
n
1
DG
1
A
G
2
n
2
DG
2
A
G
3
n
3
DG
3
A
G
4
n
4
DG
4
A
C
5
n
5
DC
5
A
T
6
n
6
DT
6
A
C
7
n
7
DC
7
A
C
8
n
8
DC
8
A
G
9
n
1
DG
9
B
G
10
n
2
DG
10
B
G
11
n
3
DG
11
B
G
12
n
4
DG
12
B
C
13
n
5
DC
13
B
T
14
n
6
DT
14
B
C
15
n
7
DC
15
B
C
16
n
8
DC
16
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
3.04
0.30
108.30
111.34
A
A
A
O4'
C1'
N9
DG
DG
DG
1
1
1
N
1
-4.37
0.70
119.90
115.53
A
A
A
N3
C2
N2
DG
DG
DG
1
1
1
N
1
4.10
0.60
119.90
124.00
A
A
A
N1
C6
O6
DG
DG
DG
1
1
1
N
1
2.95
0.30
108.30
111.25
A
A
A
O4'
C1'
N9
DG
DG
DG
2
2
2
N
1
-6.35
0.80
102.40
96.05
A
A
A
C3'
C2'
C1'
DG
DG
DG
3
3
3
N
1
5.98
0.60
119.90
125.88
A
A
A
N1
C6
O6
DG
DG
DG
3
3
3
N
1
-5.33
0.60
128.60
123.27
A
A
A
C5
C6
O6
DG
DG
DG
3
3
3
N
1
3.77
0.50
106.80
110.57
A
A
A
O4'
C1'
C2'
DG
DG
DG
4
4
4
N
1
-4.56
0.70
119.90
115.34
A
A
A
N3
C2
N2
DG
DG
DG
4
4
4
N
1
7.14
0.30
108.30
115.44
A
A
A
O4'
C1'
N1
DC
DC
DC
5
5
5
N
1
-13.92
1.50
119.60
105.68
A
A
A
OP1
P
OP2
DT
DT
DT
6
6
6
N
1
4.86
0.30
108.30
113.16
A
A
A
O4'
C1'
N1
DT
DT
DT
6
6
6
N
1
7.15
0.30
108.30
115.45
A
A
A
O4'
C1'
N1
DC
DC
DC
7
7
7
N
1
6.66
0.30
108.30
114.96
A
A
A
O4'
C1'
N1
DC
DC
DC
8
8
8
N
1
-6.48
0.70
102.20
95.72
B
B
B
C4'
C3'
C2'
DG
DG
DG
9
9
9
N
1
3.43
0.30
108.30
111.73
B
B
B
O4'
C1'
N9
DG
DG
DG
9
9
9
N
1
2.24
0.30
108.30
110.54
B
B
B
O4'
C1'
N9
DG
DG
DG
10
10
10
N
1
-6.68
0.80
109.40
102.72
B
B
B
O5'
C5'
C4'
DG
DG
DG
11
11
11
N
1
-4.37
0.70
102.20
97.83
B
B
B
C4'
C3'
C2'
DG
DG
DG
11
11
11
N
1
3.58
0.30
108.30
111.88
B
B
B
O4'
C1'
N9
DG
DG
DG
11
11
11
N
1
8.54
1.20
119.70
128.24
B
B
B
C3'
O3'
P
DG
DG
DG
11
11
12
Y
1
3.12
0.30
108.30
111.42
B
B
B
O4'
C1'
N9
DG
DG
DG
12
12
12
N
1
4.94
0.30
108.30
113.24
B
B
B
O4'
C1'
N1
DC
DC
DC
13
13
13
N
1
5.24
0.30
108.30
113.54
B
B
B
O4'
C1'
N1
DT
DT
DT
14
14
14
N
1
5.23
0.80
123.10
128.33
B
B
B
N1
C2
O2
DT
DT
DT
14
14
14
N
1
-6.83
0.60
122.30
115.47
B
B
B
N3
C2
O2
DT
DT
DT
14
14
14
N
1
-6.62
0.80
102.40
95.78
B
B
B
C3'
C2'
C1'
DC
DC
DC
15
15
15
N
1
6.75
0.30
108.30
115.05
B
B
B
O4'
C1'
N1
DC
DC
DC
15
15
15
N
1
9.37
1.20
119.70
129.07
B
B
B
C3'
O3'
P
DC
DC
DC
15
15
16
Y
1
5.18
0.30
108.30
113.48
B
B
B
O4'
C1'
N1
DC
DC
DC
16
16
16
N
1
A
A
C5'
C4'
DG
DG
3
3
-0.070
0.011
1.509
1.439
N
1
A
A
N1
C2
DC
DC
8
8
0.069
0.010
1.397
1.466
N
1
B
B
N7
C8
DG
DG
12
12
-0.044
0.006
1.305
1.261
N
1
B
B
O4'
C1'
DT
DT
14
14
0.069
0.011
1.420
1.489
N
1
B
B
O3'
C3'
DC
DC
15
15
-0.062
0.006
1.419
1.357
N
0.1360000
2.250
10.000
1924
1
2.000
TR
isotropic
TR
isotropic
2.250
10.000
52
376
0
324
0
fix
fix
2.250
1D92
2414
1
refinement
NUCLSQ
REFINED CRYSTAL STRUCTURE OF AN OCTANUCLEOTIDE DUPLEX WITH G.T MISMATCHED BASE-PAIRS
1
N
N
1
N
N
2
N
N
2
N
N
hydrog
WATSON-CRICK
A
DG
1
A
N1
DG
1
1_555
B
DC
16
B
N3
DC
8
1_555
hydrog
WATSON-CRICK
A
DG
1
A
N2
DG
1
1_555
B
DC
16
B
O2
DC
8
1_555
hydrog
WATSON-CRICK
A
DG
1
A
O6
DG
1
1_555
B
DC
16
B
N4
DC
8
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N1
DG
2
1_555
B
DC
15
B
N3
DC
7
1_555
hydrog
WATSON-CRICK
A
DG
2
A
N2
DG
2
1_555
B
DC
15
B
O2
DC
7
1_555
hydrog
WATSON-CRICK
A
DG
2
A
O6
DG
2
1_555
B
DC
15
B
N4
DC
7
1_555
hydrog
TYPE_28_PAIR
A
DG
3
A
N1
DG
3
1_555
B
DT
14
B
O2
DT
6
1_555
hydrog
TYPE_28_PAIR
A
DG
3
A
O6
DG
3
1_555
B
DT
14
B
N3
DT
6
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N1
DG
4
1_555
B
DC
13
B
N3
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
4
A
N2
DG
4
1_555
B
DC
13
B
O2
DC
5
1_555
hydrog
WATSON-CRICK
A
DG
4
A
O6
DG
4
1_555
B
DC
13
B
N4
DC
5
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N3
DC
5
1_555
B
DG
12
B
N1
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
5
A
N4
DC
5
1_555
B
DG
12
B
O6
DG
4
1_555
hydrog
WATSON-CRICK
A
DC
5
A
O2
DC
5
1_555
B
DG
12
B
N2
DG
4
1_555
hydrog
TYPE_28_PAIR
A
DT
6
A
N3
DT
6
1_555
B
DG
11
B
O6
DG
3
1_555
hydrog
TYPE_28_PAIR
A
DT
6
A
O2
DT
6
1_555
B
DG
11
B
N1
DG
3
1_555
hydrog
WATSON-CRICK
A
DC
7
A
N3
DC
7
1_555
B
DG
10
B
N1
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
7
A
N4
DC
7
1_555
B
DG
10
B
O6
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
7
A
O2
DC
7
1_555
B
DG
10
B
N2
DG
2
1_555
hydrog
WATSON-CRICK
A
DC
8
A
N3
DC
8
1_555
B
DG
9
B
N1
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
8
A
N4
DC
8
1_555
B
DG
9
B
O6
DG
1
1_555
hydrog
WATSON-CRICK
A
DC
8
A
O2
DC
8
1_555
B
DG
9
B
N2
DG
1
1_555
DNA
A-DNA, DOUBLE HELIX, MISMATCHED, DNA
1D92
PDB
1
1D92
1
8
1D92
1
8
1D92
A
1
1
8
9
16
1D92
9
16
1D92
B
1
1
8
169
P 61