1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Inoue, M. Muto, Y. Sakamoto, H. Yokoyama, S. RIKEN Structural Genomics/Proteomics Initiative (RSGI) http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N N N 2 S C N 3 N C N 4 N O N 5 N C N 6 N O N 7 N H N 8 N H N 9 N H N 10 N H N 11 N H N 12 N H N 13 N H N 14 N N N 15 S C N 16 N C N 17 N O N 18 N C N 19 N C N 20 N C N 21 N N N 22 N C N 23 N N N 24 N N N 25 N O N 26 N H N 27 N H N 28 N H N 29 N H N 30 N H N 31 N H N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N N N 42 S C N 43 N C N 44 N O N 45 N C N 46 N C N 47 N O N 48 N N N 49 N O N 50 N H N 51 N H N 52 N H N 53 N H N 54 N H N 55 N H N 56 N H N 57 N H N 58 N N N 59 S C N 60 N C N 61 N O N 62 N C N 63 N C N 64 N O N 65 N O N 66 N O N 67 N H N 68 N H N 69 N H N 70 N H N 71 N H N 72 N H N 73 N H N 74 N N N 75 S C N 76 N C N 77 N O N 78 N C N 79 N C N 80 N C N 81 N O N 82 N N N 83 N O N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N H N 91 N H N 92 N H N 93 N H N 94 N N N 95 S C N 96 N C N 97 N O N 98 N C N 99 N C N 100 N C N 101 N O N 102 N O N 103 N O N 104 N H N 105 N H N 106 N H N 107 N H N 108 N H N 109 N H N 110 N H N 111 N H N 112 N H N 113 N N N 114 N C N 115 N C N 116 N O N 117 N O N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 S C N 125 N C N 126 N O N 127 S C N 128 N C N 129 N C N 130 N C N 131 N O N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N H N 138 N H N 139 N H N 140 N H N 141 N H N 142 N H N 143 N H N 144 N H N 145 N N N 146 S C N 147 N C N 148 N O N 149 N C N 150 N C N 151 N C N 152 N C N 153 N O N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N N N 168 S C N 169 N C N 170 N O N 171 N C N 172 N C N 173 N C N 174 N C N 175 N N N 176 N O N 177 N H N 178 N H N 179 N H N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N H N 191 N H N 192 N N N 193 S C N 194 N C N 195 N O N 196 N C N 197 N C N 198 N S N 199 N C N 200 N O N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N H N 210 N H N 211 N H N 212 N N N 213 S C N 214 N C N 215 N O N 216 N C Y 217 N C Y 218 N C Y 219 N C Y 220 N C Y 221 N C Y 222 N C N 223 N O N 224 N H N 225 N H N 226 N H N 227 N H N 228 N H N 229 N H N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N N N 236 S C N 237 N C N 238 N O N 239 N C N 240 N C N 241 N C N 242 N O N 243 N H N 244 N H N 245 N H N 246 N H N 247 N H N 248 N H N 249 N H N 250 N H N 251 N H N 252 N N N 253 S C N 254 N C N 255 N O N 256 N C N 257 N O N 258 N O N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N H N 266 N N N 267 S C N 268 N C N 269 N O N 270 R C N 271 N O N 272 N C N 273 N O N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N N N 284 S C N 285 N C N 286 N O N 287 N C Y 288 N C Y 289 N C Y 290 N C Y 291 N C Y 292 N C Y 293 N C N 294 N O N 295 N O N 296 N H N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N N N 308 S C N 309 N C N 310 N O N 311 N C N 312 N C N 313 N C N 314 N O N 315 N H N 316 N H N 317 N H N 318 N H N 319 N H N 320 N H N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 1 N sing N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N sing N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N doub N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N doub N 34 N sing N 35 N sing N 36 N sing N 37 N sing N 38 N sing N 39 N sing N 40 N sing N 41 N sing N 42 N sing N 43 N sing N 44 N sing N 45 N doub N 46 N sing N 47 N sing N 48 N sing N 49 N sing N 50 N doub N 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N sing N 59 N sing N 60 N sing N 61 N doub N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N doub N 67 N sing N 68 N sing N 69 N sing N 70 N sing N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N doub N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N doub N 96 N sing N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N sing N 102 N sing N 103 N doub N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N sing N 113 N doub N 114 N sing N 115 N sing N 116 N sing N 117 N sing N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N doub N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N sing N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N sing N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N doub N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N doub N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N sing N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N sing N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N doub N 189 N sing N 190 N sing N 191 N sing N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N sing N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N doub N 208 N sing N 209 N sing N 210 N sing N 211 N sing Y 212 N doub Y 213 N sing Y 214 N sing N 215 N sing Y 216 N doub N 217 N sing Y 218 N doub N 219 N sing Y 220 N sing N 221 N sing N 222 N sing N 223 N sing N 224 N sing N 225 N sing N 226 N sing N 227 N sing N 228 N sing N 229 N sing N 230 N doub N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N sing N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N doub N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N doub N 261 N sing N 262 N sing N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N doub N 277 N sing N 278 N sing N 279 N sing N 280 N sing Y 281 N doub Y 282 N sing Y 283 N sing N 284 N sing Y 285 N doub N 286 N sing Y 287 N doub N 288 N sing Y 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N doub N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N sing N 308 N sing N 309 N sing N 310 N sing N 311 N sing UK Nucleic Acids Res. NARHAD 0389 0305-1048 28 1743 1750 10.1093/nar/28.8.1743 10734193 NMR studies on functional structures of the AU-rich element-binding domains of Hu antigen C. 2000 10.2210/pdb1d9a/pdb pdb_00001d9a 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 9351.658 HU ANTIGEN C SECOND RNA-BINDING DOMAIN (RBD2) 1 man polymer no no DANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFA NNPSQ DANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFA NNPSQ A trt001000186.1 polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus Escherichia Escherichia coli sample 10090 Mus musculus 469008 Escherichia coli BL21(DE3) BL21(DE3) PK7 RIKEN Structural Genomics/Proteomics Initiative RSGI database_2 pdbx_struct_assembly pdbx_struct_oper_list chem_comp_atom chem_comp_bond repository Initial release Version format compliance Version format compliance Database references Derived calculations Data collection 1 0 2000-04-07 1 1 2008-04-27 1 2 2011-07-13 1 3 2022-02-16 1 4 2024-05-22 _database_2.pdbx_DOI _database_2.pdbx_database_accession FIRST RNA-BINDING DOMAIN (RBD1) OF HUC Y RCSB Y RCSB 1999-10-26 REL REL THIS STRUCTURE WAS DETERMINED USING STANDARD 2D HOMONUCLEAR AND 15N-SEPARATED HETERONUCLEAR TECHNIQUES. 1 2D NOESY 3D_15N-SEPARATED_NOESY 20 mM 3.6 AMBIENT 298 K DISTANCE GEOMETRY AND SIMULATED ANNEALING 2MM PROTEIN; 20 MM POTASSIUM OXALATE BUFFER; 90% H2O; 10% D2O 2MM PROTEIN U-15N; 20 MM POTASSIUM OXALATE BUFFER; 90% H2O; 10% D2O BRUNGER structure solution X-PLOR 3.1 BRUNGER refinement X-PLOR 3.1 500 Bruker DMX ASP 1 n 1 ASP 1 A ALA 2 n 2 ALA 2 A ASN 3 n 3 ASN 3 A LEU 4 n 4 LEU 4 A TYR 5 n 5 TYR 5 A VAL 6 n 6 VAL 6 A SER 7 n 7 SER 7 A GLY 8 n 8 GLY 8 A LEU 9 n 9 LEU 9 A PRO 10 n 10 PRO 10 A LYS 11 n 11 LYS 11 A THR 12 n 12 THR 12 A MET 13 n 13 MET 13 A SER 14 n 14 SER 14 A GLN 15 n 15 GLN 15 A LYS 16 n 16 LYS 16 A GLU 17 n 17 GLU 17 A MET 18 n 18 MET 18 A GLU 19 n 19 GLU 19 A GLN 20 n 20 GLN 20 A LEU 21 n 21 LEU 21 A PHE 22 n 22 PHE 22 A SER 23 n 23 SER 23 A GLN 24 n 24 GLN 24 A TYR 25 n 25 TYR 25 A GLY 26 n 26 GLY 26 A ARG 27 n 27 ARG 27 A ILE 28 n 28 ILE 28 A ILE 29 n 29 ILE 29 A THR 30 n 30 THR 30 A SER 31 n 31 SER 31 A ARG 32 n 32 ARG 32 A ILE 33 n 33 ILE 33 A LEU 34 n 34 LEU 34 A LEU 35 n 35 LEU 35 A ASP 36 n 36 ASP 36 A GLN 37 n 37 GLN 37 A ALA 38 n 38 ALA 38 A THR 39 n 39 THR 39 A GLY 40 n 40 GLY 40 A VAL 41 n 41 VAL 41 A SER 42 n 42 SER 42 A ARG 43 n 43 ARG 43 A GLY 44 n 44 GLY 44 A VAL 45 n 45 VAL 45 A GLY 46 n 46 GLY 46 A PHE 47 n 47 PHE 47 A ILE 48 n 48 ILE 48 A ARG 49 n 49 ARG 49 A PHE 50 n 50 PHE 50 A ASP 51 n 51 ASP 51 A LYS 52 n 52 LYS 52 A ARG 53 n 53 ARG 53 A ILE 54 n 54 ILE 54 A GLU 55 n 55 GLU 55 A ALA 56 n 56 ALA 56 A GLU 57 n 57 GLU 57 A GLU 58 n 58 GLU 58 A ALA 59 n 59 ALA 59 A ILE 60 n 60 ILE 60 A LYS 61 n 61 LYS 61 A GLY 62 n 62 GLY 62 A LEU 63 n 63 LEU 63 A ASN 64 n 64 ASN 64 A GLY 65 n 65 GLY 65 A GLN 66 n 66 GLN 66 A LYS 67 n 67 LYS 67 A PRO 68 n 68 PRO 68 A LEU 69 n 69 LEU 69 A GLY 70 n 70 GLY 70 A ALA 71 n 71 ALA 71 A ALA 72 n 72 ALA 72 A GLU 73 n 73 GLU 73 A PRO 74 n 74 PRO 74 A ILE 75 n 75 ILE 75 A THR 76 n 76 THR 76 A VAL 77 n 77 VAL 77 A LYS 78 n 78 LYS 78 A PHE 79 n 79 PHE 79 A ALA 80 n 80 ALA 80 A ASN 81 n 81 ASN 81 A ASN 82 n 82 ASN 82 A PRO 83 n 83 PRO 83 A SER 84 n 84 SER 84 A GLN 85 n 85 GLN 85 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O LEU 34 A O LEU 34 A N VAL 45 A N VAL 45 A O GLY 46 A O GLY 46 A N VAL 6 A N VAL 6 A N SER 7 A N SER 7 A O THR 76 A O THR 76 1 A ARG 27 0.307 SIDE CHAIN 1 A ARG 32 0.290 SIDE CHAIN 1 A ARG 43 0.208 SIDE CHAIN 1 A ARG 49 0.253 SIDE CHAIN 1 A ARG 53 0.257 SIDE CHAIN 1 A ALA 2 -116.40 63.03 1 A ARG 27 -43.00 105.54 1 A ILE 29 -88.43 -73.55 1 A ARG 32 175.55 152.58 1 A LEU 35 -162.73 102.49 1 A GLN 37 -150.08 62.36 1 A ALA 38 -176.52 -42.70 1 A LEU 63 -133.61 -46.76 1 A ASN 64 -39.28 136.07 1 A LYS 67 -160.81 102.35 1 A ALA 71 -43.01 105.84 1 A ALA 72 171.82 -26.54 1 A THR 76 -159.72 82.91 1 A ASN 82 59.72 118.97 SOLUTION STRUCTURE OF THE SECOND RNA-BINDING DOMAIN (RBD2) OF HU ANTIGEN C (HUC) 1 N N A SER 14 A SER 14 HELX_P A GLN 24 A GLN 24 1 1 11 A LYS 52 A LYS 52 HELX_P A ASN 64 A ASN 64 1 2 13 RNA BINDING PROTEIN RNA-BINDING DOMAIN, RIKEN Structural Genomics/Proteomics Initiative, RSGI, Structural Genomics, RNA BINDING PROTEIN ELAV3_MOUSE UNP 1 Q60900 124 208 1D9A 1 85 Q60900 A 1 1 85 4 anti-parallel anti-parallel anti-parallel A ILE 28 A ILE 28 A LEU 34 A LEU 34 A VAL 45 A VAL 45 A PHE 50 A PHE 50 A TYR 5 A TYR 5 A SER 7 A SER 7 A THR 76 A THR 76 A LYS 78 A LYS 78 1 P 1