1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Oh, D.
Kim, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
H2 N
16.023
AMINO GROUP
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
DK
J.Pept.Res.
JPERFA
2150
1397-002X
53
578
589
10.1034/j.1399-3011.1999.00067.x
10424354
NMR structural characterization of cecropin A(1-8) - magainin 2(1-12) and cecropin A (1-8) - melittin (1-12) hybrid peptides.
1999
10.2210/pdb1d9l/pdb
pdb_00001d9l
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
2183.789
CECROPIN A(1-8)-MAGAININ 2 HYBRID PEPTIDE ANALOGUE
1
man
polymer
no
yes
KWKLFKKIKFLHSAKKF(NH2)
KWKLFKKIKFLHSAKKFX
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
African clawed frog, cecropia moth
Xenopus, Hyalophora
,
,
sample
MEMBRANE
8355,7123
Xenopus laevis, Hyalophora cecropia
database_2
pdbx_nmr_software
pdbx_nmr_spectrometer
pdbx_struct_assembly
pdbx_struct_oper_list
struct_conn
struct_site
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
1999-11-12
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
_pdbx_nmr_spectrometer.model
_struct_conn.pdbx_leaving_atom_flag
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
SOLUTION STRUCTURE OF CECROPIN A(1-8)-MAGAININ 2 HYBRID PEPTIDE ANALOGUE ( DELETION GIG SEQUENCE FROM CA-MA)
SOLUTION STRUCTURE OF CECROPIN A(1-8)-MAGAININ 2(1-12) HYBRID PEPTIDE ANALOGUE (SUBSTITUTION GIG SEQUENCE OF CA-MA TO PRO)
SOLUTION STRUCTURE OF CECROPIN A(1-8)-MAGAININ 2(1-12) HYBRID PEPTIDE ANALOGUE (SUBSTITUTION GIG SEQUENCE OF CA-MA TO PRO)
SOLUTION STRUCTURE OF CECROPIN A(1-8)-MAGAININ 2(1-12) HYBRID PEPTIDE ANALOGUE (SUBSTITUTION TRP2 OF CA-MA TO LEU)
RCSB
Y
RCSB
1999-10-28
REL
REL
THIS STRUCTURE WAS DETERMINED USING STANDARD 2D HOMONUCLEAR TECHNIQUES.
structures with the lowest energy
50
20
2D NOESY
2D NOESY
2D NOESY
DQF-COSY
4.29
1
atm
303
K
4.29
1
atm
298
K
HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING
2MM PEPTIDE; 90MM DPC MICELLES; 90% H2O, 10% D2O
2MM PEPTIDE; 90MM DPC MICELLES; D2O
collection
XwinNMR
2.5
processing
Felix
95.0
data analysis
Felix
95.0
BRUNGER
refinement
X-PLOR
3.851
400
Bruker
AVANCE
600
Bruker
AMX
LYS
1
n
1
LYS
1
A
TRP
2
n
2
TRP
2
A
LYS
3
n
3
LYS
3
A
LEU
4
n
4
LEU
4
A
PHE
5
n
5
PHE
5
A
LYS
6
n
6
LYS
6
A
LYS
7
n
7
LYS
7
A
ILE
8
n
8
ILE
8
A
LYS
9
n
9
LYS
9
A
PHE
10
n
10
PHE
10
A
LEU
11
n
11
LEU
11
A
HIS
12
n
12
HIS
12
A
SER
13
n
13
SER
13
A
ALA
14
n
14
ALA
14
A
LYS
15
n
15
LYS
15
A
LYS
16
n
16
LYS
16
A
PHE
17
n
17
PHE
17
A
NH2
18
n
18
NH2
18
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
17
A
A
O
H
LYS
LYS
1
3
1.57
1
A
TRP
2
-161.63
-158.59
1
A
LYS
3
-163.90
114.08
2
A
TRP
2
46.46
-161.44
4
A
LYS
3
-160.27
76.63
4
A
LYS
15
-85.04
-104.69
4
A
LYS
16
-56.72
-162.14
5
A
TRP
2
-113.19
-92.01
5
A
LYS
3
-140.34
-100.88
6
A
TRP
2
-109.23
-69.16
6
A
HIS
12
-132.21
-41.34
6
A
LYS
15
-64.40
-98.69
7
A
TRP
2
-158.10
-92.57
7
A
LYS
15
-49.59
158.70
8
A
LYS
15
-61.94
-157.12
8
A
LYS
16
-83.09
48.48
9
A
TRP
2
63.88
-144.40
9
A
LYS
3
-140.08
-154.09
9
A
LYS
16
-70.45
-159.02
10
A
TRP
2
-81.15
-154.74
10
A
LYS
3
-71.57
-107.24
10
A
LYS
15
-54.01
170.67
11
A
TRP
2
-82.12
-152.87
11
A
LYS
15
-55.67
-162.26
12
A
TRP
2
58.26
161.04
12
A
LYS
15
-49.33
-179.59
13
A
LYS
3
-89.04
34.61
15
A
TRP
2
-82.28
-141.28
15
A
LYS
16
-53.67
98.70
16
A
LYS
3
-103.18
-71.27
17
A
TRP
2
66.81
-60.32
17
A
LYS
3
-68.48
-166.26
17
A
LYS
16
-64.28
-167.04
18
A
TRP
2
-48.87
98.95
18
A
LYS
3
-146.03
11.91
19
A
TRP
2
-165.24
-102.31
19
A
LYS
3
-149.86
15.06
19
A
LYS
16
-61.20
-144.36
20
A
LYS
15
-69.51
-145.46
20
A
LYS
16
-47.21
175.10
SOLUTION STRUCTURE OF CECROPIN A(1-8)-MAGAININ 2 HYBRID PEPTIDE ANALOGUE(P1)
1
N
N
A
LEU
4
A
LEU
4
HELX_P
A
ALA
14
A
ALA
14
1
1
11
covale
1.306
both
A
PHE
17
A
C
PHE
17
1_555
A
NH2
18
A
N
NH2
18
1_555
MEMBRANE PROTEIN
HELIX-HELIX, MEMBRANE PROTEIN
CECA_HYACE
UNP
1
P01507
MAGA_XENLA
UNP
1
P11006
27
34
1D9L
1
8
P01507
A
1
1
8
224
232
1D9L
9
17
P11006
A
2
9
17
BINDING SITE FOR RESIDUE NH2 A 18
A
NH2
18
Software
2
A
LYS
16
A
LYS
16
2
1_555
A
PHE
17
A
PHE
17
2
1_555
1
P 1