1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Oh, D.
Kim, Y.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
H2 N
16.023
AMINO GROUP
non-polymer
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
DK
J.Pept.Res.
JPERFA
2150
1397-002X
53
578
589
10.1034/j.1399-3011.1999.00067.x
10424354
NMR structural characterization of cecropin A(1-8) - magainin 2(1-12) and cecropin A (1-8) - melittin (1-12) hybrid peptides.
1999
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
2337.998
CECROPIN A(1-8)-MAGAININ 2 HYBRID PEPTIDE ANALOGUE
1
man
polymer
no
yes
KLKLFKKIGIGKFLHSAKKF(NH2)
KLKLFKKIGIGKFLHSAKKFX
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
African clawed frog, cecropia moth
Xenopus, Hyalophora
,
,
sample
MEMBRANE
8355,7123
Xenopus laevis, Hyalophora cecropia
struct_ref_seq_dif
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
1
0
1999-11-12
1
1
2008-04-27
1
2
2011-07-13
1
3
2018-06-27
_struct_ref_seq_dif.details
1D9J CONTAINS THE CA-MA HYBRID PEPTIDE.
1D9L CONTAINS THE ANALOGUE OF CA-MA HYBRID PEPTIDE(P1:GIG DELETED).
1D9M CONTAINS THE ANALOGUE OF CA-MA HYBRID PEPTIDE(P2:GIG SUBSTITUTED BY PRO).
1D9O CONTAINS THE ANALOGUE OF CA-MA HYBRID PEPTIDE(P3:TRP2 SUBSTITUTED BY ALA).
RCSB
Y
RCSB
1999-10-29
REL
REL
THIS STRUCTURE WAS DETERMINED USING STANDARD 2D HOMONUCLEAR TECHNIQUES.
structures with the lowest energy
50
20
2D NOESY
2D NOESY
DQF-COSY
2D NOESY
3.64
1
atm
298
K
3.64
1
atm
313
K
HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING
2MM PEPTIDE; 90MM DPC MICELLES; 90% H2O, 10% D2O
2MM PEPTIDE; 90MM DPC MICELLES; D2O
collection
XWINNMR
2.5
processing
FELIX
95.0
data analysis
FELIX
95.0
refinement
X-PLOR
3.851
400
Bruker
Avance
600
Bruker
AMX
LYS
1
n
1
LYS
1
A
LEU
2
n
2
LEU
2
A
LYS
3
n
3
LYS
3
A
LEU
4
n
4
LEU
4
A
PHE
5
n
5
PHE
5
A
LYS
6
n
6
LYS
6
A
LYS
7
n
7
LYS
7
A
ILE
8
n
8
ILE
8
A
GLY
9
n
9
GLY
9
A
ILE
10
n
10
ILE
10
A
GLY
11
n
11
GLY
11
A
LYS
12
n
12
LYS
12
A
PHE
13
n
13
PHE
13
A
LEU
14
n
14
LEU
14
A
HIS
15
n
15
HIS
15
A
SER
16
n
16
SER
16
A
ALA
17
n
17
ALA
17
A
LYS
18
n
18
LYS
18
A
LYS
19
n
19
LYS
19
A
PHE
20
n
20
PHE
20
A
NH2
21
n
21
NH2
21
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
A
A
O
H
LEU
LYS
4
7
1.57
11
A
A
O
H
PHE
ILE
5
8
1.52
19
A
A
O
H
GLY
LEU
11
14
1.54
1
A
LEU
4
-49.24
-19.72
1
A
ILE
10
-86.85
35.38
2
A
LYS
3
-99.34
44.39
2
A
ILE
10
-108.52
45.82
3
A
LEU
4
-146.17
49.25
3
A
PHE
5
-165.47
-47.10
5
A
LEU
2
67.20
117.01
5
A
LYS
3
-152.83
39.79
6
A
LEU
2
-58.92
-171.08
6
A
ILE
10
-86.16
46.83
7
A
ILE
10
-137.15
-35.65
8
A
LEU
2
45.17
-171.31
8
A
PHE
5
-150.06
-28.27
8
A
LYS
7
-74.29
-78.01
8
A
ILE
10
-89.15
47.33
9
A
LEU
4
-97.57
49.76
9
A
ILE
10
-99.69
54.95
10
A
LEU
2
-48.44
91.01
11
A
LEU
2
-177.95
110.40
11
A
LYS
3
-153.04
26.36
12
A
LEU
2
62.86
138.87
12
A
LYS
7
-62.29
-85.97
13
A
LEU
2
-66.70
95.50
13
A
LYS
3
-162.45
24.28
13
A
LYS
19
-150.44
20.34
14
A
LEU
2
67.56
75.42
14
A
LEU
4
-162.67
-35.27
15
A
LEU
2
56.30
94.77
15
A
LYS
3
-165.01
33.64
15
A
LEU
4
-158.48
50.40
15
A
PHE
5
-147.94
-83.61
15
A
LYS
19
-159.32
50.45
16
A
LYS
3
-103.12
58.42
16
A
LEU
4
-80.27
47.92
16
A
PHE
5
-100.71
-64.35
18
A
LYS
3
-103.40
54.06
18
A
LEU
4
-152.79
73.34
18
A
PHE
5
-74.75
-89.63
19
A
LEU
2
-113.92
58.86
19
A
LYS
3
-144.32
10.37
19
A
LEU
4
-104.48
52.15
20
A
LEU
2
-69.70
79.73
20
A
LEU
4
-157.96
81.78
20
A
PHE
5
-164.45
-34.69
CECROPIN A(1-8)-MAGAININ 2(1-12) HYBRID PEPTIDE ANALOGUE(P4)
SOLUTION STRUCTURE OF CECROPIN A(1-8)-MAGAININ 2(1-12) HYBRID PEPTIDE ANALOGUE(P4)
1
N
N
A
LYS
3
A
LYS
3
HELX_P
A
GLY
9
A
GLY
9
5
1
7
A
ILE
10
A
ILE
10
HELX_P
A
LYS
19
A
LYS
19
1
2
10
covale
1.305
A
PHE
20
A
C
PHE
20
1_555
A
NH2
21
A
N
NH2
21
1_555
MEMBRANE PROTEIN
HELIX-HINGE-HELIX, MEMBRANE PROTEIN
CECA_HYACE
UNP
1
P01507
MAGA_XENLA
UNP
1
P11006
27
34
1D9P
1
8
P01507
A
1
1
8
129
140
1D9P
9
20
P11006
A
2
9
20
1
TRP
ENGINEERED mutation
LEU
2
1D9P
A
P01507
UNP
28
2
1
amidation
NH2
21
1D9P
A
P11006
UNP
21
BINDING SITE FOR RESIDUE NH2 A 21
Software
2
A
ALA
17
A
ALA
17
2
1_555
A
PHE
20
A
PHE
20
2
1_555
1
P 1