0.013661 0.000000 0.004203 0.000000 0.020325 0.000000 0.000000 0.000000 0.016930 0.00000 0.00000 0.00000 Huang, W. Jia, J. Schneider, G. Lindqvist, Y. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 4 90.00 107.10 90.00 73.200 49.200 61.800 C11 H18 N5 O12 P3 505.208 PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER ADENOSINE-5'-[BETA, GAMMA-METHYLENE]TRIPHOSPHATE non-polymer C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C9 H20 N2 O2 188.267 7,8-DIAMINO-NONANOIC ACID non-polymer C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking Mn 2 54.938 MANGANESE (II) ION non-polymer C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking N 1 N P N 2 N O N 3 N O N 4 N O N 5 S P N 6 N O N 7 N O N 8 N C N 9 R P N 10 N O N 11 N O N 12 N O N 13 N O N 14 N C N 15 R C N 16 N O N 17 S C N 18 N O N 19 R C N 20 N O N 21 R C Y 22 N N Y 23 N C Y 24 N N Y 25 N C Y 26 N C N 27 N N Y 28 N N Y 29 N C Y 30 N N Y 31 N C N 32 N H N 33 N H N 34 N H N 35 N H N 36 N H N 37 N H N 38 N H N 39 N H N 40 N H N 41 N H N 42 N H N 43 N H N 44 N H N 45 N H N 46 N H N 47 N H N 48 N H N 49 N H N 50 N N N 51 S C N 52 N C N 53 N O N 54 N C N 55 N O N 56 N H N 57 N H N 58 N H N 59 N H N 60 N H N 61 N H N 62 N H N 63 N N N 64 S C N 65 N C N 66 N O N 67 N C N 68 N C N 69 N C N 70 N N N 71 N C N 72 N N N 73 N N N 74 N O N 75 N H N 76 N H N 77 N H N 78 N H N 79 N H N 80 N H N 81 N H N 82 N H N 83 N H N 84 N H N 85 N H N 86 N H N 87 N H N 88 N H N 89 N H N 90 N N N 91 S C N 92 N C N 93 N O N 94 N C N 95 N C N 96 N O N 97 N N N 98 N O N 99 N H N 100 N H N 101 N H N 102 N H N 103 N H N 104 N H N 105 N H N 106 N H N 107 N N N 108 S C N 109 N C N 110 N O N 111 N C N 112 N C N 113 N O N 114 N O N 115 N O N 116 N H N 117 N H N 118 N H N 119 N H N 120 N H N 121 N H N 122 N H N 123 N N N 124 R C N 125 N C N 126 N O N 127 N C N 128 N S N 129 N O N 130 N H N 131 N H N 132 N H N 133 N H N 134 N H N 135 N H N 136 N H N 137 N C N 138 N O N 139 N O N 140 N C N 141 N C N 142 N C N 143 N C N 144 N C N 145 R C N 146 S C N 147 N C N 148 N N N 149 N N N 150 N H N 151 N H N 152 N H N 153 N H N 154 N H N 155 N H N 156 N H N 157 N H N 158 N H N 159 N H N 160 N H N 161 N H N 162 N H N 163 N H N 164 N H N 165 N H N 166 N H N 167 N H N 168 N H N 169 N H N 170 N N N 171 S C N 172 N C N 173 N O N 174 N C N 175 N C N 176 N C N 177 N O N 178 N N N 179 N O N 180 N H N 181 N H N 182 N H N 183 N H N 184 N H N 185 N H N 186 N H N 187 N H N 188 N H N 189 N H N 190 N N N 191 S C N 192 N C N 193 N O N 194 N C N 195 N C N 196 N C N 197 N O N 198 N O N 199 N O N 200 N H N 201 N H N 202 N H N 203 N H N 204 N H N 205 N H N 206 N H N 207 N H N 208 N H N 209 N N N 210 N C N 211 N C N 212 N O N 213 N O N 214 N H N 215 N H N 216 N H N 217 N H N 218 N H N 219 N N N 220 S C N 221 N C N 222 N O N 223 N C Y 224 N C Y 225 N N Y 226 N C Y 227 N C Y 228 N N N 229 N O N 230 N H N 231 N H N 232 N H N 233 N H N 234 N H N 235 N H N 236 N H N 237 N H N 238 N H N 239 N H N 240 N O N 241 N H N 242 N H N 243 N N N 244 S C N 245 N C N 246 N O N 247 S C N 248 N C N 249 N C N 250 N C N 251 N O N 252 N H N 253 N H N 254 N H N 255 N H N 256 N H N 257 N H N 258 N H N 259 N H N 260 N H N 261 N H N 262 N H N 263 N H N 264 N H N 265 N N N 266 S C N 267 N C N 268 N O N 269 N C N 270 N C N 271 N C N 272 N C N 273 N O N 274 N H N 275 N H N 276 N H N 277 N H N 278 N H N 279 N H N 280 N H N 281 N H N 282 N H N 283 N H N 284 N H N 285 N H N 286 N H N 287 N N N 288 S C N 289 N C N 290 N O N 291 N C N 292 N C N 293 N C N 294 N C N 295 N N N 296 N O N 297 N H N 298 N H N 299 N H N 300 N H N 301 N H N 302 N H N 303 N H N 304 N H N 305 N H N 306 N H N 307 N H N 308 N H N 309 N H N 310 N H N 311 N H N 312 N N N 313 S C N 314 N C N 315 N O N 316 N C N 317 N C N 318 N S N 319 N C N 320 N O N 321 N H N 322 N H N 323 N H N 324 N H N 325 N H N 326 N H N 327 N H N 328 N H N 329 N H N 330 N H N 331 N H N 332 N MN N 333 N N N 334 S C N 335 N C N 336 N O N 337 N C Y 338 N C Y 339 N C Y 340 N C Y 341 N C Y 342 N C Y 343 N C N 344 N O N 345 N H N 346 N H N 347 N H N 348 N H N 349 N H N 350 N H N 351 N H N 352 N H N 353 N H N 354 N H N 355 N H N 356 N N N 357 S C N 358 N C N 359 N O N 360 N C N 361 N C N 362 N C N 363 N O N 364 N H N 365 N H N 366 N H N 367 N H N 368 N H N 369 N H N 370 N H N 371 N H N 372 N H N 373 N N N 374 S C N 375 N C N 376 N O N 377 N C N 378 N O N 379 N O N 380 N H N 381 N H N 382 N H N 383 N H N 384 N H N 385 N H N 386 N H N 387 N N N 388 S C N 389 N C N 390 N O N 391 R C N 392 N O N 393 N C N 394 N O N 395 N H N 396 N H N 397 N H N 398 N H N 399 N H N 400 N H N 401 N H N 402 N H N 403 N H N 404 N N N 405 S C N 406 N C N 407 N O N 408 N C Y 409 N C Y 410 N C Y 411 N C Y 412 N N Y 413 N C Y 414 N C Y 415 N C Y 416 N C Y 417 N C N 418 N O N 419 N H N 420 N H N 421 N H N 422 N H N 423 N H N 424 N H N 425 N H N 426 N H N 427 N H N 428 N H N 429 N H N 430 N H N 431 N N N 432 S C N 433 N C N 434 N O N 435 N C Y 436 N C Y 437 N C Y 438 N C Y 439 N C Y 440 N C Y 441 N C N 442 N O N 443 N O N 444 N H N 445 N H N 446 N H N 447 N H N 448 N H N 449 N H N 450 N H N 451 N H N 452 N H N 453 N H N 454 N H N 455 N N N 456 S C N 457 N C N 458 N O N 459 N C N 460 N C N 461 N C N 462 N O N 463 N H N 464 N H N 465 N H N 466 N H N 467 N H N 468 N H N 469 N H N 470 N H N 471 N H N 472 N H N 473 N H N 1 N doub N 2 N sing N 3 N sing N 4 N sing N 5 N sing N 6 N sing N 7 N doub N 8 N sing N 9 N sing N 10 N sing N 11 N sing N 12 N sing N 13 N sing N 14 N doub N 15 N sing N 16 N sing N 17 N sing N 18 N sing N 19 N sing N 20 N sing N 21 N sing N 22 N sing N 23 N sing N 24 N sing N 25 N sing N 26 N sing N 27 N sing N 28 N sing N 29 N sing N 30 N sing N 31 N sing N 32 N sing N 33 N sing N 34 N sing N 35 N sing N 36 N sing Y 37 N sing Y 38 N sing Y 39 N doub N 40 N sing Y 41 N sing Y 42 N sing Y 43 N doub N 44 N sing Y 45 N doub N 46 N sing N 47 N sing Y 48 N sing Y 49 N doub N 50 N sing Y 51 N sing N 52 N sing N 53 N sing N 54 N sing N 55 N sing N 56 N sing N 57 N sing N 58 N doub N 59 N sing N 60 N sing N 61 N sing N 62 N sing N 63 N sing N 64 N sing N 65 N sing N 66 N sing N 67 N sing N 68 N sing N 69 N sing N 70 N doub N 71 N sing N 72 N sing N 73 N sing N 74 N sing N 75 N sing N 76 N sing N 77 N sing N 78 N sing N 79 N sing N 80 N sing N 81 N sing N 82 N sing N 83 N sing N 84 N doub N 85 N sing N 86 N sing N 87 N sing N 88 N sing N 89 N sing N 90 N sing N 91 N sing N 92 N sing N 93 N sing N 94 N sing N 95 N sing N 96 N doub N 97 N sing N 98 N sing N 99 N sing N 100 N sing N 101 N doub N 102 N sing N 103 N sing N 104 N sing N 105 N sing N 106 N sing N 107 N sing N 108 N sing N 109 N sing N 110 N sing N 111 N sing N 112 N doub N 113 N sing N 114 N sing N 115 N sing N 116 N sing N 117 N doub N 118 N sing N 119 N sing N 120 N sing N 121 N sing N 122 N sing N 123 N sing N 124 N sing N 125 N sing N 126 N sing N 127 N doub N 128 N sing N 129 N sing N 130 N sing N 131 N sing N 132 N sing N 133 N sing N 134 N doub N 135 N sing N 136 N sing N 137 N sing N 138 N sing N 139 N sing N 140 N sing N 141 N sing N 142 N sing N 143 N sing N 144 N sing N 145 N sing N 146 N sing N 147 N sing N 148 N sing N 149 N sing N 150 N sing N 151 N sing N 152 N sing N 153 N sing N 154 N sing N 155 N sing N 156 N sing N 157 N sing N 158 N sing N 159 N sing N 160 N sing N 161 N sing N 162 N sing N 163 N sing N 164 N sing N 165 N sing N 166 N sing N 167 N sing N 168 N sing N 169 N sing N 170 N sing N 171 N sing N 172 N doub N 173 N sing N 174 N sing N 175 N sing N 176 N sing N 177 N sing N 178 N sing N 179 N sing N 180 N doub N 181 N sing N 182 N sing N 183 N sing N 184 N sing N 185 N sing N 186 N sing N 187 N sing N 188 N sing N 189 N sing N 190 N sing N 191 N doub N 192 N sing N 193 N sing N 194 N sing N 195 N sing N 196 N sing N 197 N sing N 198 N sing N 199 N doub N 200 N sing N 201 N sing N 202 N sing N 203 N sing N 204 N sing N 205 N sing N 206 N sing N 207 N sing N 208 N sing N 209 N doub N 210 N sing N 211 N sing N 212 N sing N 213 N sing N 214 N sing N 215 N sing N 216 N sing N 217 N sing N 218 N doub N 219 N sing N 220 N sing N 221 N sing N 222 N sing Y 223 N sing Y 224 N doub Y 225 N doub N 226 N sing Y 227 N sing N 228 N sing Y 229 N sing N 230 N sing N 231 N sing N 232 N sing N 233 N sing N 234 N sing N 235 N sing N 236 N sing N 237 N sing N 238 N sing N 239 N sing N 240 N sing N 241 N doub N 242 N sing N 243 N sing N 244 N sing N 245 N sing N 246 N sing N 247 N sing N 248 N sing N 249 N sing N 250 N sing N 251 N sing N 252 N sing N 253 N sing N 254 N sing N 255 N sing N 256 N sing N 257 N sing N 258 N sing N 259 N sing N 260 N sing N 261 N sing N 262 N doub N 263 N sing N 264 N sing N 265 N sing N 266 N sing N 267 N sing N 268 N sing N 269 N sing N 270 N sing N 271 N sing N 272 N sing N 273 N sing N 274 N sing N 275 N sing N 276 N sing N 277 N sing N 278 N sing N 279 N sing N 280 N sing N 281 N sing N 282 N sing N 283 N doub N 284 N sing N 285 N sing N 286 N sing N 287 N sing N 288 N sing N 289 N sing N 290 N sing N 291 N sing N 292 N sing N 293 N sing N 294 N sing N 295 N sing N 296 N sing N 297 N sing N 298 N sing N 299 N sing N 300 N sing N 301 N sing N 302 N sing N 303 N sing N 304 N sing N 305 N sing N 306 N sing N 307 N doub N 308 N sing N 309 N sing N 310 N sing N 311 N sing N 312 N sing N 313 N sing N 314 N sing N 315 N sing N 316 N sing N 317 N sing N 318 N sing N 319 N sing N 320 N sing N 321 N sing N 322 N sing N 323 N sing N 324 N sing N 325 N sing N 326 N doub N 327 N sing N 328 N sing N 329 N sing N 330 N sing Y 331 N doub Y 332 N sing Y 333 N sing N 334 N sing Y 335 N doub N 336 N sing Y 337 N doub N 338 N sing Y 339 N sing N 340 N sing N 341 N sing N 342 N sing N 343 N sing N 344 N sing N 345 N sing N 346 N sing N 347 N sing N 348 N sing N 349 N doub N 350 N sing N 351 N sing N 352 N sing N 353 N sing N 354 N sing N 355 N sing N 356 N sing N 357 N sing N 358 N sing N 359 N sing N 360 N sing N 361 N sing N 362 N sing N 363 N sing N 364 N sing N 365 N sing N 366 N doub N 367 N sing N 368 N sing N 369 N sing N 370 N sing N 371 N sing N 372 N sing N 373 N sing N 374 N sing N 375 N sing N 376 N sing N 377 N sing N 378 N sing N 379 N doub N 380 N sing N 381 N sing N 382 N sing N 383 N sing N 384 N sing N 385 N sing N 386 N sing N 387 N sing N 388 N sing N 389 N sing N 390 N sing N 391 N sing N 392 N sing N 393 N sing N 394 N sing N 395 N doub N 396 N sing N 397 N sing N 398 N sing N 399 N sing Y 400 N doub Y 401 N sing Y 402 N sing N 403 N sing Y 404 N doub Y 405 N sing Y 406 N sing N 407 N sing Y 408 N sing Y 409 N doub N 410 N sing Y 411 N doub N 412 N sing Y 413 N sing N 414 N sing N 415 N sing N 416 N sing N 417 N sing N 418 N sing N 419 N sing N 420 N sing N 421 N sing N 422 N sing N 423 N doub N 424 N sing N 425 N sing N 426 N sing N 427 N sing Y 428 N doub Y 429 N sing Y 430 N sing N 431 N sing Y 432 N doub N 433 N sing Y 434 N doub N 435 N sing Y 436 N sing N 437 N sing N 438 N sing N 439 N sing N 440 N sing N 441 N sing N 442 N sing N 443 N sing N 444 N sing N 445 N sing N 446 N sing N 447 N doub N 448 N sing N 449 N sing N 450 N sing N 451 N sing N 452 N sing N 453 N sing N 454 N sing N 455 N sing N 456 N sing N 457 N sing N 458 N sing US Biochemistry BICHAW 0033 0006-2960 34 10985 10995 10.1021/bi00035a004 7669756 Mechanism of an ATP-dependent carboxylase, dethiobiotin synthetase, based on crystallographic studies of complexes with substrates and a reaction intermediate. 1995 UK Structure STRUE6 2005 0969-2126 2 407 Crystal Structure of an ATP-Dependent Carboxylase, Dethiobiotin Synthetase, at 1.65 A Resolution 1994 10.2210/pdb1dah/pdb pdb_00001dah 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 IMAGE PLATE 1994-02-15 RIGAKU RAXIS II M x-ray 1 1.5418 1.0 1.5418 24028.289 DETHIOBIOTIN SYNTHETASE 6.3.3.3 1 man polymer 54.938 MANGANESE (II) ION 1 syn non-polymer 188.267 7,8-DIAMINO-NONANOIC ACID 1 syn non-polymer 505.208 PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER 1 syn non-polymer 18.015 water 142 nat water DTBS no no SKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPT SPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQ VIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL SKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPT SPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQ VIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia sample 562 Escherichia coli 562 Escherichia coli 2.21 34. chem_comp_atom chem_comp_bond database_2 pdbx_database_status pdbx_struct_conn_angle struct_conn struct_site repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations Other 1 0 1996-06-20 1 1 2008-03-24 1 2 2011-07-13 1 3 2024-02-07 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_database_status.process_site _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id Y BNL 1995-05-08 REL MN MANGANESE (II) ION DNN 7,8-DIAMINO-NONANOIC ACID ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER HOH water MN 369 2 MN MN 369 A DNN 225 3 DNN DNN 225 A ACP 226 4 ACP ACP 226 A HOH 227 5 HOH HOH 227 A HOH 228 5 HOH HOH 228 A HOH 229 5 HOH HOH 229 A HOH 230 5 HOH HOH 230 A HOH 231 5 HOH HOH 231 A HOH 232 5 HOH HOH 232 A HOH 233 5 HOH HOH 233 A HOH 234 5 HOH HOH 234 A HOH 235 5 HOH HOH 235 A HOH 236 5 HOH HOH 236 A HOH 237 5 HOH HOH 237 A HOH 238 5 HOH HOH 238 A HOH 239 5 HOH HOH 239 A HOH 240 5 HOH HOH 240 A HOH 241 5 HOH HOH 241 A HOH 242 5 HOH HOH 242 A HOH 243 5 HOH HOH 243 A HOH 244 5 HOH HOH 244 A HOH 245 5 HOH HOH 245 A HOH 246 5 HOH HOH 246 A HOH 247 5 HOH HOH 247 A HOH 248 5 HOH HOH 248 A HOH 249 5 HOH HOH 249 A HOH 250 5 HOH HOH 250 A HOH 251 5 HOH HOH 251 A HOH 252 5 HOH HOH 252 A HOH 253 5 HOH HOH 253 A HOH 254 5 HOH HOH 254 A HOH 255 5 HOH HOH 255 A HOH 256 5 HOH HOH 256 A HOH 257 5 HOH HOH 257 A HOH 258 5 HOH HOH 258 A HOH 259 5 HOH HOH 259 A HOH 260 5 HOH HOH 260 A HOH 261 5 HOH HOH 261 A HOH 262 5 HOH HOH 262 A HOH 263 5 HOH HOH 263 A HOH 264 5 HOH HOH 264 A HOH 265 5 HOH HOH 265 A HOH 266 5 HOH HOH 266 A HOH 267 5 HOH HOH 267 A HOH 268 5 HOH HOH 268 A HOH 269 5 HOH HOH 269 A HOH 270 5 HOH HOH 270 A HOH 271 5 HOH HOH 271 A HOH 272 5 HOH HOH 272 A HOH 273 5 HOH HOH 273 A HOH 274 5 HOH HOH 274 A HOH 275 5 HOH HOH 275 A HOH 276 5 HOH HOH 276 A HOH 277 5 HOH HOH 277 A HOH 278 5 HOH HOH 278 A HOH 279 5 HOH HOH 279 A HOH 280 5 HOH HOH 280 A HOH 281 5 HOH HOH 281 A HOH 282 5 HOH HOH 282 A HOH 283 5 HOH HOH 283 A HOH 284 5 HOH HOH 284 A HOH 285 5 HOH HOH 285 A HOH 286 5 HOH HOH 286 A HOH 287 5 HOH HOH 287 A HOH 288 5 HOH HOH 288 A HOH 289 5 HOH HOH 289 A HOH 290 5 HOH HOH 290 A HOH 291 5 HOH HOH 291 A HOH 292 5 HOH HOH 292 A HOH 293 5 HOH HOH 293 A HOH 294 5 HOH HOH 294 A HOH 295 5 HOH HOH 295 A HOH 296 5 HOH HOH 296 A HOH 297 5 HOH HOH 297 A HOH 298 5 HOH HOH 298 A HOH 299 5 HOH HOH 299 A HOH 300 5 HOH HOH 300 A HOH 301 5 HOH HOH 301 A HOH 302 5 HOH HOH 302 A HOH 303 5 HOH HOH 303 A HOH 304 5 HOH HOH 304 A HOH 305 5 HOH HOH 305 A HOH 306 5 HOH HOH 306 A HOH 307 5 HOH HOH 307 A HOH 308 5 HOH HOH 308 A HOH 309 5 HOH HOH 309 A HOH 310 5 HOH HOH 310 A HOH 311 5 HOH HOH 311 A HOH 312 5 HOH HOH 312 A HOH 313 5 HOH HOH 313 A HOH 314 5 HOH HOH 314 A HOH 315 5 HOH HOH 315 A HOH 316 5 HOH HOH 316 A HOH 317 5 HOH HOH 317 A HOH 318 5 HOH HOH 318 A HOH 319 5 HOH HOH 319 A HOH 320 5 HOH HOH 320 A HOH 321 5 HOH HOH 321 A HOH 322 5 HOH HOH 322 A HOH 323 5 HOH HOH 323 A HOH 324 5 HOH HOH 324 A HOH 325 5 HOH HOH 325 A HOH 326 5 HOH HOH 326 A HOH 327 5 HOH HOH 327 A HOH 328 5 HOH HOH 328 A HOH 329 5 HOH HOH 329 A HOH 330 5 HOH HOH 330 A HOH 331 5 HOH HOH 331 A HOH 332 5 HOH HOH 332 A HOH 333 5 HOH HOH 333 A HOH 334 5 HOH HOH 334 A HOH 335 5 HOH HOH 335 A HOH 336 5 HOH HOH 336 A HOH 337 5 HOH HOH 337 A HOH 338 5 HOH HOH 338 A HOH 339 5 HOH HOH 339 A HOH 340 5 HOH HOH 340 A HOH 341 5 HOH HOH 341 A HOH 342 5 HOH HOH 342 A HOH 343 5 HOH HOH 343 A HOH 344 5 HOH HOH 344 A HOH 345 5 HOH HOH 345 A HOH 346 5 HOH HOH 346 A HOH 347 5 HOH HOH 347 A HOH 348 5 HOH HOH 348 A HOH 349 5 HOH HOH 349 A HOH 350 5 HOH HOH 350 A HOH 351 5 HOH HOH 351 A HOH 352 5 HOH HOH 352 A HOH 353 5 HOH HOH 353 A HOH 354 5 HOH HOH 354 A HOH 355 5 HOH HOH 355 A HOH 356 5 HOH HOH 356 A HOH 357 5 HOH HOH 357 A HOH 358 5 HOH HOH 358 A HOH 359 5 HOH HOH 359 A HOH 360 5 HOH HOH 360 A HOH 361 5 HOH HOH 361 A HOH 362 5 HOH HOH 362 A HOH 363 5 HOH HOH 363 A HOH 364 5 HOH HOH 364 A HOH 365 5 HOH HOH 365 A HOH 366 5 HOH HOH 366 A HOH 367 5 HOH HOH 367 A HOH 368 5 HOH HOH 368 A SER 1 n 1 SER 1 A LYS 2 n 2 LYS 2 A ARG 3 n 3 ARG 3 A TYR 4 n 4 TYR 4 A PHE 5 n 5 PHE 5 A VAL 6 n 6 VAL 6 A THR 7 n 7 THR 7 A GLY 8 n 8 GLY 8 A THR 9 n 9 THR 9 A ASP 10 n 10 ASP 10 A THR 11 n 11 THR 11 A GLU 12 n 12 GLU 12 A VAL 13 n 13 VAL 13 A GLY 14 n 14 GLY 14 A LYS 15 n 15 LYS 15 A THR 16 n 16 THR 16 A VAL 17 n 17 VAL 17 A ALA 18 n 18 ALA 18 A SER 19 n 19 SER 19 A CYS 20 n 20 CYS 20 A ALA 21 n 21 ALA 21 A LEU 22 n 22 LEU 22 A LEU 23 n 23 LEU 23 A GLN 24 n 24 GLN 24 A ALA 25 n 25 ALA 25 A ALA 26 n 26 ALA 26 A LYS 27 n 27 LYS 27 A ALA 28 n 28 ALA 28 A ALA 29 n 29 ALA 29 A GLY 30 n 30 GLY 30 A TYR 31 n 31 TYR 31 A ARG 32 n 32 ARG 32 A THR 33 n 33 THR 33 A ALA 34 n 34 ALA 34 A GLY 35 n 35 GLY 35 A TYR 36 n 36 TYR 36 A LYS 37 n 37 LYS 37 A PRO 38 n 38 PRO 38 A VAL 39 n 39 VAL 39 A ALA 40 n 40 ALA 40 A SER 41 n 41 SER 41 A GLY 42 n 42 GLY 42 A SER 43 n 43 SER 43 A GLU 44 n 44 GLU 44 A LYS 45 n 45 LYS 45 A THR 46 n 46 THR 46 A PRO 47 n 47 PRO 47 A GLU 48 n 48 GLU 48 A GLY 49 n 49 GLY 49 A LEU 50 n 50 LEU 50 A ARG 51 n 51 ARG 51 A ASN 52 n 52 ASN 52 A SER 53 n 53 SER 53 A ASP 54 n 54 ASP 54 A ALA 55 n 55 ALA 55 A LEU 56 n 56 LEU 56 A ALA 57 n 57 ALA 57 A LEU 58 n 58 LEU 58 A GLN 59 n 59 GLN 59 A ARG 60 n 60 ARG 60 A ASN 61 n 61 ASN 61 A SER 62 n 62 SER 62 A SER 63 n 63 SER 63 A LEU 64 n 64 LEU 64 A GLN 65 n 65 GLN 65 A LEU 66 n 66 LEU 66 A ASP 67 n 67 ASP 67 A TYR 68 n 68 TYR 68 A ALA 69 n 69 ALA 69 A THR 70 n 70 THR 70 A VAL 71 n 71 VAL 71 A ASN 72 n 72 ASN 72 A PRO 73 n 73 PRO 73 A TYR 74 n 74 TYR 74 A THR 75 n 75 THR 75 A PHE 76 n 76 PHE 76 A ALA 77 n 77 ALA 77 A GLU 78 n 78 GLU 78 A PRO 79 n 79 PRO 79 A THR 80 n 80 THR 80 A SER 81 n 81 SER 81 A PRO 82 n 82 PRO 82 A HIS 83 n 83 HIS 83 A ILE 84 n 84 ILE 84 A ILE 85 n 85 ILE 85 A SER 86 n 86 SER 86 A ALA 87 n 87 ALA 87 A GLN 88 n 88 GLN 88 A GLU 89 n 89 GLU 89 A GLY 90 n 90 GLY 90 A ARG 91 n 91 ARG 91 A PRO 92 n 92 PRO 92 A ILE 93 n 93 ILE 93 A GLU 94 n 94 GLU 94 A SER 95 n 95 SER 95 A LEU 96 n 96 LEU 96 A VAL 97 n 97 VAL 97 A MET 98 n 98 MET 98 A SER 99 n 99 SER 99 A ALA 100 n 100 ALA 100 A GLY 101 n 101 GLY 101 A LEU 102 n 102 LEU 102 A ARG 103 n 103 ARG 103 A ALA 104 n 104 ALA 104 A LEU 105 n 105 LEU 105 A GLU 106 n 106 GLU 106 A GLN 107 n 107 GLN 107 A GLN 108 n 108 GLN 108 A ALA 109 n 109 ALA 109 A ASP 110 n 110 ASP 110 A TRP 111 n 111 TRP 111 A VAL 112 n 112 VAL 112 A LEU 113 n 113 LEU 113 A VAL 114 n 114 VAL 114 A GLU 115 n 115 GLU 115 A GLY 116 n 116 GLY 116 A ALA 117 n 117 ALA 117 A GLY 118 n 118 GLY 118 A GLY 119 n 119 GLY 119 A TRP 120 n 120 TRP 120 A PHE 121 n 121 PHE 121 A THR 122 n 122 THR 122 A PRO 123 n 123 PRO 123 A LEU 124 n 124 LEU 124 A SER 125 n 125 SER 125 A ASP 126 n 126 ASP 126 A THR 127 n 127 THR 127 A PHE 128 n 128 PHE 128 A THR 129 n 129 THR 129 A PHE 130 n 130 PHE 130 A ALA 131 n 131 ALA 131 A ASP 132 n 132 ASP 132 A TRP 133 n 133 TRP 133 A VAL 134 n 134 VAL 134 A THR 135 n 135 THR 135 A GLN 136 n 136 GLN 136 A GLU 137 n 137 GLU 137 A GLN 138 n 138 GLN 138 A LEU 139 n 139 LEU 139 A PRO 140 n 140 PRO 140 A VAL 141 n 141 VAL 141 A ILE 142 n 142 ILE 142 A LEU 143 n 143 LEU 143 A VAL 144 n 144 VAL 144 A VAL 145 n 145 VAL 145 A GLY 146 n 146 GLY 146 A VAL 147 n 147 VAL 147 A LYS 148 n 148 LYS 148 A LEU 149 n 149 LEU 149 A GLY 150 n 150 GLY 150 A CYS 151 n 151 CYS 151 A ILE 152 n 152 ILE 152 A ASN 153 n 153 ASN 153 A HIS 154 n 154 HIS 154 A ALA 155 n 155 ALA 155 A MET 156 n 156 MET 156 A LEU 157 n 157 LEU 157 A THR 158 n 158 THR 158 A ALA 159 n 159 ALA 159 A GLN 160 n 160 GLN 160 A VAL 161 n 161 VAL 161 A ILE 162 n 162 ILE 162 A GLN 163 n 163 GLN 163 A HIS 164 n 164 HIS 164 A ALA 165 n 165 ALA 165 A GLY 166 n 166 GLY 166 A LEU 167 n 167 LEU 167 A THR 168 n 168 THR 168 A LEU 169 n 169 LEU 169 A ALA 170 n 170 ALA 170 A GLY 171 n 171 GLY 171 A TRP 172 n 172 TRP 172 A VAL 173 n 173 VAL 173 A ALA 174 n 174 ALA 174 A ASN 175 n 175 ASN 175 A ASP 176 n 176 ASP 176 A VAL 177 n 177 VAL 177 A THR 178 n 178 THR 178 A PRO 179 n 179 PRO 179 A PRO 180 n 180 PRO 180 A GLY 181 n 181 GLY 181 A LYS 182 n 182 LYS 182 A ARG 183 n 183 ARG 183 A HIS 184 n 184 HIS 184 A ALA 185 n 185 ALA 185 A GLU 186 n 186 GLU 186 A TYR 187 n 187 TYR 187 A MET 188 n 188 MET 188 A THR 189 n 189 THR 189 A THR 190 n 190 THR 190 A LEU 191 n 191 LEU 191 A THR 192 n 192 THR 192 A ARG 193 n 193 ARG 193 A MET 194 n 194 MET 194 A ILE 195 n 195 ILE 195 A PRO 196 n 196 PRO 196 A ALA 197 n 197 ALA 197 A PRO 198 n 198 PRO 198 A LEU 199 n 199 LEU 199 A LEU 200 n 200 LEU 200 A GLY 201 n 201 GLY 201 A GLU 202 n 202 GLU 202 A ILE 203 n 203 ILE 203 A PRO 204 n 204 PRO 204 A TRP 205 n 205 TRP 205 A LEU 206 n 206 LEU 206 A ALA 207 n 207 ALA 207 A GLU 208 n 208 GLU 208 A ASN 209 n 209 ASN 209 A PRO 210 n 210 PRO 210 A GLU 211 n 211 GLU 211 A ASN 212 n 212 ASN 212 A ALA 213 n 213 ALA 213 A ALA 214 n 214 ALA 214 A THR 215 n 215 THR 215 A GLY 216 n 216 GLY 216 A LYS 217 n 217 LYS 217 A TYR 218 n 218 TYR 218 A ILE 219 n 219 ILE 219 A ASN 220 n 220 ASN 220 A LEU 221 n 221 LEU 221 A ALA 222 n 222 ALA 222 A LEU 223 n 223 LEU 223 A LEU 224 n 224 LEU 224 A author_defined_assembly 2 dimeric A THR 16 A OG1 THR 16 1_555 A MN 369 B MN MN 1_555 A ASP 54 A OD2 ASP 54 1_555 93.5 A THR 16 A OG1 THR 16 1_555 A MN 369 B MN MN 1_555 A GLU 115 A OE2 GLU 115 1_555 70.6 A ASP 54 A OD2 ASP 54 1_555 A MN 369 B MN MN 1_555 A GLU 115 A OE2 GLU 115 1_555 94.4 A THR 16 A OG1 THR 16 1_555 A MN 369 B MN MN 1_555 A ACP 226 D O2G ACP 1_555 171.3 A ASP 54 A OD2 ASP 54 1_555 A MN 369 B MN MN 1_555 A ACP 226 D O2G ACP 1_555 95.0 A GLU 115 A OE2 GLU 115 1_555 A MN 369 B MN MN 1_555 A ACP 226 D O2G ACP 1_555 110.3 A THR 16 A OG1 THR 16 1_555 A MN 369 B MN MN 1_555 A ACP 226 D O1B ACP 1_555 88.7 A ASP 54 A OD2 ASP 54 1_555 A MN 369 B MN MN 1_555 A ACP 226 D O1B ACP 1_555 153.2 A GLU 115 A OE2 GLU 115 1_555 A MN 369 B MN MN 1_555 A ACP 226 D O1B ACP 1_555 111.4 A ACP 226 D O2G ACP 1_555 A MN 369 B MN MN 1_555 A ACP 226 D O1B ACP 1_555 82.9 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 2_555 -x,y,-z crystal symmetry operation 0.0000000000 0.0000000000 0.0000000000 A O LEU 200 A O LEU 200 A N TRP 172 A N TRP 172 A O ALA 170 A O ALA 170 A N VAL 141 A N VAL 141 A O PRO 140 A O PRO 140 A N PHE 5 A N PHE 5 A O LYS 2 A O LYS 2 A N VAL 112 A N VAL 112 A O TRP 111 A O TRP 111 A N ALA 34 A N ALA 34 A O ALA 40 A O ALA 40 A N TYR 74 A N TYR 74 1 3.73 0.50 120.30 124.03 A A A NE CZ NH1 ARG ARG ARG 51 51 51 N 1 -5.47 0.50 120.30 114.83 A A A NE CZ NH2 ARG ARG ARG 51 51 51 N 1 4.64 0.50 120.30 124.94 A A A NE CZ NH1 ARG ARG ARG 91 91 91 N 1 -3.21 0.50 120.30 117.09 A A A NE CZ NH2 ARG ARG ARG 91 91 91 N 1 -14.61 2.10 111.80 97.19 A A A CG CD NE ARG ARG ARG 103 103 103 N 1 5.18 0.50 120.30 125.48 A A A NE CZ NH1 ARG ARG ARG 103 103 103 N 1 -8.03 0.50 120.30 112.27 A A A NE CZ NH2 ARG ARG ARG 103 103 103 N 1 6.66 0.80 106.30 112.96 A A A CD1 CG CD2 TRP TRP TRP 111 111 111 N 1 -6.00 0.80 107.30 101.30 A A A CE2 CD2 CG TRP TRP TRP 111 111 111 N 1 6.43 0.80 106.30 112.73 A A A CD1 CG CD2 TRP TRP TRP 120 120 120 N 1 -5.50 0.80 107.30 101.80 A A A CE2 CD2 CG TRP TRP TRP 120 120 120 N 1 6.21 0.80 106.30 112.51 A A A CD1 CG CD2 TRP TRP TRP 133 133 133 N 1 -5.28 0.80 107.30 102.02 A A A CE2 CD2 CG TRP TRP TRP 133 133 133 N 1 6.09 0.80 106.30 112.39 A A A CD1 CG CD2 TRP TRP TRP 172 172 172 N 1 -16.34 1.60 100.20 83.86 A A A CG SD CE MET MET MET 194 194 194 N 1 5.92 0.80 106.30 112.22 A A A CD1 CG CD2 TRP TRP TRP 205 205 205 N 1 -5.78 0.80 107.30 101.52 A A A CE2 CD2 CG TRP TRP TRP 205 205 205 N 1 A A NE2 CD2 HIS HIS 83 83 -0.070 0.011 1.373 1.303 N 1 A A NE2 CD2 HIS HIS 154 154 -0.074 0.011 1.373 1.299 N 1 A A NE2 CD2 HIS HIS 184 184 -0.069 0.011 1.373 1.304 N 1 A PRO 179 -48.96 159.32 22.0 0.1740000 0.1740000 1.64 6.0 18683 1 1.0 1.64 6.0 187 1879 0 0 1692 0.013 2.7 1DAH 19323 1.0 0.0790000 1 2.0 75. model building X-PLOR refinement X-PLOR data reduction R-AXIS phasing X-PLOR DETHIOBIOTIN SYNTHETASE COMPLEXED WITH 7,8-DIAMINO-NONANOIC ACID, 5'-ADENOSYL-METHYLENE-TRIPHOSPHATE, AND MANGANESE 1 N N 2 N N 3 N N 4 N N 5 N N A LYS 15 A LYS 15 HELX_P A ALA 29 A ALA 29 1 1 15 A SER 53 A SER 53 HELX_P A ASN 61 A ASN 61 1 2 9 A TYR 68 A TYR 68 HELX_P A VAL 71 A VAL 71 1 3 4 A PRO 82 A PRO 82 HELX_P A GLU 89 A GLU 89 1 4 8 A SER 95 A SER 95 HELX_P A GLN 108 A GLN 108 1 5 14 A PHE 130 A PHE 130 HELX_P A GLU 137 A GLU 137 1 6 8 A CYS 151 A CYS 151 HELX_P A ALA 165 A ALA 165 1 7 15 A HIS 184 A HIS 184 HELX_P A MET 194 A MET 194 1 8 11 A GLY 216 A GLY 216 HELX_P A TYR 218 A TYR 218 5 9 3 metalc 2.355 A THR 16 A OG1 THR 16 1_555 A MN 369 B MN MN 1_555 metalc 2.293 A ASP 54 A OD2 ASP 54 1_555 A MN 369 B MN MN 1_555 metalc 2.491 A GLU 115 A OE2 GLU 115 1_555 A MN 369 B MN MN 1_555 metalc 2.166 A ACP 226 D O2G ACP 1_555 A MN 369 B MN MN 1_555 metalc 2.216 A ACP 226 D O1B ACP 1_555 A MN 369 B MN MN 1_555 LIGASE LIGASE, BIOTIN BIOSYNTHESIS, MAGNESIUM, ATP-BINDING BIOD_ECOLI UNP 1 1 P13000 SKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPT SPHIISAQEGRPIESLVMSAGLRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTAQ VIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYINLALL 1 224 1DAH 1 224 P13000 A 1 1 224 6 2 parallel parallel parallel parallel parallel parallel A LEU 199 A LEU 199 A ILE 203 A ILE 203 A LEU 169 A LEU 169 A ASN 175 A ASN 175 A PRO 140 A PRO 140 A GLY 146 A GLY 146 A LYS 2 A LYS 2 A GLY 8 A GLY 8 A TRP 111 A TRP 111 A GLU 115 A GLU 115 A THR 33 A THR 33 A TYR 36 A TYR 36 A VAL 39 A VAL 39 A SER 41 A SER 41 A TYR 74 A TYR 74 A PHE 76 A PHE 76 BINDING SITE FOR RESIDUE MN A 369 A MN 369 Software 4 BINDING SITE FOR RESIDUE DNN A 225 A DNN 225 Software 13 BINDING SITE FOR RESIDUE ACP A 226 A ACP 226 Software 19 A THR 16 A THR 16 4 1_555 A ASP 54 A ASP 54 4 1_555 A GLU 115 A GLU 115 4 1_555 A ACP 226 D ACP 4 1_555 A GLU 12 A GLU 12 13 1_555 A SER 41 A SER 41 13 1_555 A PRO 79 A PRO 79 13 1_555 A GLY 150 A GLY 150 13 2_555 A CYS 151 A CYS 151 13 2_555 A ILE 152 A ILE 152 13 2_555 A ASN 153 A ASN 153 13 2_555 A TYR 187 A TYR 187 13 2_555 A ACP 226 D ACP 13 1_555 A HOH 337 E HOH 13 1_555 A HOH 346 E HOH 13 1_555 A HOH 367 E HOH 13 1_555 A HOH 368 E HOH 13 1_555 A THR 11 A THR 11 19 1_555 A GLU 12 A GLU 12 19 1_555 A VAL 13 A VAL 13 19 1_555 A GLY 14 A GLY 14 19 1_555 A LYS 15 A LYS 15 19 1_555 A THR 16 A THR 16 19 1_555 A VAL 17 A VAL 17 19 1_555 A ASP 54 A ASP 54 19 1_555 A ASN 175 A ASN 175 19 1_555 A ASP 176 A ASP 176 19 1_555 A PRO 204 A PRO 204 19 1_555 A TRP 205 A TRP 205 19 1_555 A LEU 206 A LEU 206 19 1_555 A PRO 210 A PRO 210 19 1_555 A GLU 211 A GLU 211 19 1_555 A DNN 225 C DNN 19 1_555 A HOH 352 E HOH 19 1_555 A HOH 368 E HOH 19 1_555 A MN 369 B MN 19 1_555 5 C 1 2 1