0.007421
0.004284
0.000000
0.000000
0.008569
0.000000
0.000000
0.000000
0.008051
0.00000
0.00000
0.00000
CIS PROLINE - PRO L 8
CIS PROLINE - PRO L 95
CIS PROLINE - PRO L 141
CIS PROLINE - PRO H 149
CIS PROLINE - PRO H 151
ARG H 200 - PRO H 202 OMEGA =324.89 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION
PRO H 227 - ARG H 228 OMEGA =142.10 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION
Arevalo, J.H.
Wilson, I.A.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
12
90.00
90.00
120.00
134.760
134.760
124.210
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C2 H6 O
46.068
ETHANOL
non-polymer
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
J.Mol.Biol.
JMOBAK
0070
0022-2836
231
103
118
10.1006/jmbi.1993.1260
8496956
Three-dimensional structure of an anti-steroid Fab' and progesterone-Fab' complex.
1993
UK
Immunology
IMMUAM
0753
0019-2805
62
511
Analysis of an Anti-Progesterone Antibody: Variable Crystal Morphology of the Fab' and Steroid-Fab' Complexes
1987
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
1
x-ray
1
1.0
23880.588
IGG1-KAPPA DB3 FAB (LIGHT CHAIN)
1
man
polymer
23754.656
IGG1-KAPPA DB3 FAB (HEAVY CHAIN)
1
man
polymer
46.068
ETHANOL
2
syn
non-polymer
no
no
DVVMTQIPLSLPVNLGDQASISCRSSQSLIHSNGNTYLHWYLQKPGQSPKLLMYKVSNRFYGVPDRFSGSGSGTDFTLKI
SRVEAEDLGIYFCSQSSHVPPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER
QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
DVVMTQIPLSLPVNLGDQASISCRSSQSLIHSNGNTYLHWYLQKPGQSPKLLMYKVSNRFYGVPDRFSGSGSGTDFTLKI
SRVEAEDLGIYFCSQSSHVPPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER
QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
L
polypeptide(L)
no
no
QIQLVQSGPELKKPGETVKISCKASGYAFTNYGVNWVKEAPGKELKWMGWINIYTGEPTYVDDFKGRFAFSLETSASTAY
LEINNLKNEDTATYFCTRGDYVNWYFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW
NSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPR
QIQLVQSGPELKKPGETVKISCKASGYAFTNYGVNWVKEAPGKELKWMGWINIYTGEPTYVDDFKGRFAFSLETSASTAY
LEINNLKNEDTATYFCTRGDYVNWYFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW
NSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPR
H
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
house mouse
sample
HYBRIDOMA
10090
Mus musculus
house mouse
sample
HYBRIDOMA
10090
Mus musculus
3.42
63.99
repository
Initial release
Version format compliance
Version format compliance
1
0
1993-10-31
1
1
2008-03-24
1
2
2011-07-13
Y
1992-11-10
REL
EOH
ETHANOL
THE SEQUENCE SUPPLIED IS THAT OF THE AUTHORS AND IT IS
DESCRIBED IN REFERENCE 1 ABOVE.
EOH
1
3
EOH
EOH
229
H
EOH
2
3
EOH
EOH
230
H
ASP
1
n
1
ASP
1
L
VAL
2
n
2
VAL
2
L
VAL
3
n
3
VAL
3
L
MET
4
n
4
MET
4
L
THR
5
n
5
THR
5
L
GLN
6
n
6
GLN
6
L
ILE
7
n
7
ILE
7
L
PRO
8
n
8
PRO
8
L
LEU
9
n
9
LEU
9
L
SER
10
n
10
SER
10
L
LEU
11
n
11
LEU
11
L
PRO
12
n
12
PRO
12
L
VAL
13
n
13
VAL
13
L
ASN
14
n
14
ASN
14
L
LEU
15
n
15
LEU
15
L
GLY
16
n
16
GLY
16
L
ASP
17
n
17
ASP
17
L
GLN
18
n
18
GLN
18
L
ALA
19
n
19
ALA
19
L
SER
20
n
20
SER
20
L
ILE
21
n
21
ILE
21
L
SER
22
n
22
SER
22
L
CYS
23
n
23
CYS
23
L
ARG
24
n
24
ARG
24
L
SER
25
n
25
SER
25
L
SER
26
n
26
SER
26
L
GLN
27
n
27
GLN
27
L
SER
27
n
28
A
SER
27
L
LEU
27
n
29
B
LEU
27
L
ILE
27
n
30
C
ILE
27
L
HIS
27
n
31
D
HIS
27
L
SER
27
n
32
E
SER
27
L
ASN
28
n
33
ASN
28
L
GLY
29
n
34
GLY
29
L
ASN
30
n
35
ASN
30
L
THR
31
n
36
THR
31
L
TYR
32
n
37
TYR
32
L
LEU
33
n
38
LEU
33
L
HIS
34
n
39
HIS
34
L
TRP
35
n
40
TRP
35
L
TYR
36
n
41
TYR
36
L
LEU
37
n
42
LEU
37
L
GLN
38
n
43
GLN
38
L
LYS
39
n
44
LYS
39
L
PRO
40
n
45
PRO
40
L
GLY
41
n
46
GLY
41
L
GLN
42
n
47
GLN
42
L
SER
43
n
48
SER
43
L
PRO
44
n
49
PRO
44
L
LYS
45
n
50
LYS
45
L
LEU
46
n
51
LEU
46
L
LEU
47
n
52
LEU
47
L
MET
48
n
53
MET
48
L
TYR
49
n
54
TYR
49
L
LYS
50
n
55
LYS
50
L
VAL
51
n
56
VAL
51
L
SER
52
n
57
SER
52
L
ASN
53
n
58
ASN
53
L
ARG
54
n
59
ARG
54
L
PHE
55
n
60
PHE
55
L
TYR
56
n
61
TYR
56
L
GLY
57
n
62
GLY
57
L
VAL
58
n
63
VAL
58
L
PRO
59
n
64
PRO
59
L
ASP
60
n
65
ASP
60
L
ARG
61
n
66
ARG
61
L
PHE
62
n
67
PHE
62
L
SER
63
n
68
SER
63
L
GLY
64
n
69
GLY
64
L
SER
65
n
70
SER
65
L
GLY
66
n
71
GLY
66
L
SER
67
n
72
SER
67
L
GLY
68
n
73
GLY
68
L
THR
69
n
74
THR
69
L
ASP
70
n
75
ASP
70
L
PHE
71
n
76
PHE
71
L
THR
72
n
77
THR
72
L
LEU
73
n
78
LEU
73
L
LYS
74
n
79
LYS
74
L
ILE
75
n
80
ILE
75
L
SER
76
n
81
SER
76
L
ARG
77
n
82
ARG
77
L
VAL
78
n
83
VAL
78
L
GLU
79
n
84
GLU
79
L
ALA
80
n
85
ALA
80
L
GLU
81
n
86
GLU
81
L
ASP
82
n
87
ASP
82
L
LEU
83
n
88
LEU
83
L
GLY
84
n
89
GLY
84
L
ILE
85
n
90
ILE
85
L
TYR
86
n
91
TYR
86
L
PHE
87
n
92
PHE
87
L
CYS
88
n
93
CYS
88
L
SER
89
n
94
SER
89
L
GLN
90
n
95
GLN
90
L
SER
91
n
96
SER
91
L
SER
92
n
97
SER
92
L
HIS
93
n
98
HIS
93
L
VAL
94
n
99
VAL
94
L
PRO
95
n
100
PRO
95
L
PRO
96
n
101
PRO
96
L
THR
97
n
102
THR
97
L
PHE
98
n
103
PHE
98
L
GLY
99
n
104
GLY
99
L
GLY
100
n
105
GLY
100
L
GLY
101
n
106
GLY
101
L
THR
102
n
107
THR
102
L
LYS
103
n
108
LYS
103
L
LEU
104
n
109
LEU
104
L
GLU
105
n
110
GLU
105
L
ILE
106
n
111
ILE
106
L
LYS
107
n
112
LYS
107
L
ARG
108
n
113
ARG
108
L
ALA
109
n
114
ALA
109
L
ASP
110
n
115
ASP
110
L
ALA
111
n
116
ALA
111
L
ALA
112
n
117
ALA
112
L
PRO
113
n
118
PRO
113
L
THR
114
n
119
THR
114
L
VAL
115
n
120
VAL
115
L
SER
116
n
121
SER
116
L
ILE
117
n
122
ILE
117
L
PHE
118
n
123
PHE
118
L
PRO
119
n
124
PRO
119
L
PRO
120
n
125
PRO
120
L
SER
121
n
126
SER
121
L
SER
122
n
127
SER
122
L
GLU
123
n
128
GLU
123
L
GLN
124
n
129
GLN
124
L
LEU
125
n
130
LEU
125
L
THR
126
n
131
THR
126
L
SER
127
n
132
SER
127
L
GLY
128
n
133
GLY
128
L
GLY
129
n
134
GLY
129
L
ALA
130
n
135
ALA
130
L
SER
131
n
136
SER
131
L
VAL
132
n
137
VAL
132
L
VAL
133
n
138
VAL
133
L
CYS
134
n
139
CYS
134
L
PHE
135
n
140
PHE
135
L
LEU
136
n
141
LEU
136
L
ASN
137
n
142
ASN
137
L
ASN
138
n
143
ASN
138
L
PHE
139
n
144
PHE
139
L
TYR
140
n
145
TYR
140
L
PRO
141
n
146
PRO
141
L
LYS
142
n
147
LYS
142
L
ASP
143
n
148
ASP
143
L
ILE
144
n
149
ILE
144
L
ASN
145
n
150
ASN
145
L
VAL
146
n
151
VAL
146
L
LYS
147
n
152
LYS
147
L
TRP
148
n
153
TRP
148
L
LYS
149
n
154
LYS
149
L
ILE
150
n
155
ILE
150
L
ASP
151
n
156
ASP
151
L
GLY
152
n
157
GLY
152
L
SER
153
n
158
SER
153
L
GLU
154
n
159
GLU
154
L
ARG
155
n
160
ARG
155
L
GLN
156
n
161
GLN
156
L
ASN
157
n
162
ASN
157
L
GLY
158
n
163
GLY
158
L
VAL
159
n
164
VAL
159
L
LEU
160
n
165
LEU
160
L
ASN
161
n
166
ASN
161
L
SER
162
n
167
SER
162
L
TRP
163
n
168
TRP
163
L
THR
164
n
169
THR
164
L
ASP
165
n
170
ASP
165
L
GLN
166
n
171
GLN
166
L
ASP
167
n
172
ASP
167
L
SER
168
n
173
SER
168
L
LYS
169
n
174
LYS
169
L
ASP
170
n
175
ASP
170
L
SER
171
n
176
SER
171
L
THR
172
n
177
THR
172
L
TYR
173
n
178
TYR
173
L
SER
174
n
179
SER
174
L
MET
175
n
180
MET
175
L
SER
176
n
181
SER
176
L
SER
177
n
182
SER
177
L
THR
178
n
183
THR
178
L
LEU
179
n
184
LEU
179
L
THR
180
n
185
THR
180
L
LEU
181
n
186
LEU
181
L
THR
182
n
187
THR
182
L
LYS
183
n
188
LYS
183
L
ASP
184
n
189
ASP
184
L
GLU
185
n
190
GLU
185
L
TYR
186
n
191
TYR
186
L
GLU
187
n
192
GLU
187
L
ARG
188
n
193
ARG
188
L
HIS
189
n
194
HIS
189
L
ASN
190
n
195
ASN
190
L
SER
191
n
196
SER
191
L
TYR
192
n
197
TYR
192
L
THR
193
n
198
THR
193
L
CYS
194
n
199
CYS
194
L
GLU
195
n
200
GLU
195
L
ALA
196
n
201
ALA
196
L
THR
197
n
202
THR
197
L
HIS
198
n
203
HIS
198
L
LYS
199
n
204
LYS
199
L
THR
200
n
205
THR
200
L
SER
201
n
206
SER
201
L
THR
202
n
207
THR
202
L
SER
203
n
208
SER
203
L
PRO
204
n
209
PRO
204
L
ILE
205
n
210
ILE
205
L
VAL
206
n
211
VAL
206
L
LYS
207
n
212
LYS
207
L
SER
208
n
213
SER
208
L
PHE
209
n
214
PHE
209
L
ASN
210
n
215
ASN
210
L
ARG
211
n
216
ARG
211
L
GLN
1
n
1
GLN
1
H
ILE
2
n
2
ILE
2
H
GLN
3
n
3
GLN
3
H
LEU
4
n
4
LEU
4
H
VAL
5
n
5
VAL
5
H
GLN
6
n
6
GLN
6
H
SER
7
n
7
SER
7
H
GLY
8
n
8
GLY
8
H
PRO
9
n
9
PRO
9
H
GLU
10
n
10
GLU
10
H
LEU
11
n
11
LEU
11
H
LYS
12
n
12
LYS
12
H
LYS
13
n
13
LYS
13
H
PRO
14
n
14
PRO
14
H
GLY
15
n
15
GLY
15
H
GLU
16
n
16
GLU
16
H
THR
17
n
17
THR
17
H
VAL
18
n
18
VAL
18
H
LYS
19
n
19
LYS
19
H
ILE
20
n
20
ILE
20
H
SER
21
n
21
SER
21
H
CYS
22
n
22
CYS
22
H
LYS
23
n
23
LYS
23
H
ALA
24
n
24
ALA
24
H
SER
25
n
25
SER
25
H
GLY
26
n
26
GLY
26
H
TYR
27
n
27
TYR
27
H
ALA
28
n
28
ALA
28
H
PHE
29
n
29
PHE
29
H
THR
30
n
30
THR
30
H
ASN
31
n
31
ASN
31
H
TYR
32
n
32
TYR
32
H
GLY
33
n
33
GLY
33
H
VAL
34
n
34
VAL
34
H
ASN
35
n
35
ASN
35
H
TRP
36
n
36
TRP
36
H
VAL
37
n
37
VAL
37
H
LYS
38
n
38
LYS
38
H
GLU
39
n
39
GLU
39
H
ALA
40
n
40
ALA
40
H
PRO
41
n
41
PRO
41
H
GLY
42
n
42
GLY
42
H
LYS
43
n
43
LYS
43
H
GLU
44
n
44
GLU
44
H
LEU
45
n
45
LEU
45
H
LYS
46
n
46
LYS
46
H
TRP
47
n
47
TRP
47
H
MET
48
n
48
MET
48
H
GLY
49
n
49
GLY
49
H
TRP
50
n
50
TRP
50
H
ILE
51
n
51
ILE
51
H
ASN
52
n
52
ASN
52
H
ILE
52
n
53
A
ILE
52
H
TYR
53
n
54
TYR
53
H
THR
54
n
55
THR
54
H
GLY
55
n
56
GLY
55
H
GLU
56
n
57
GLU
56
H
PRO
57
n
58
PRO
57
H
THR
58
n
59
THR
58
H
TYR
59
n
60
TYR
59
H
VAL
60
n
61
VAL
60
H
ASP
61
n
62
ASP
61
H
ASP
62
n
63
ASP
62
H
PHE
63
n
64
PHE
63
H
LYS
64
n
65
LYS
64
H
GLY
65
n
66
GLY
65
H
ARG
66
n
67
ARG
66
H
PHE
67
n
68
PHE
67
H
ALA
68
n
69
ALA
68
H
PHE
69
n
70
PHE
69
H
SER
70
n
71
SER
70
H
LEU
71
n
72
LEU
71
H
GLU
72
n
73
GLU
72
H
THR
73
n
74
THR
73
H
SER
74
n
75
SER
74
H
ALA
75
n
76
ALA
75
H
SER
76
n
77
SER
76
H
THR
77
n
78
THR
77
H
ALA
78
n
79
ALA
78
H
TYR
79
n
80
TYR
79
H
LEU
80
n
81
LEU
80
H
GLU
81
n
82
GLU
81
H
ILE
82
n
83
ILE
82
H
ASN
82
n
84
A
ASN
82
H
ASN
82
n
85
B
ASN
82
H
LEU
82
n
86
C
LEU
82
H
LYS
83
n
87
LYS
83
H
ASN
84
n
88
ASN
84
H
GLU
85
n
89
GLU
85
H
ASP
86
n
90
ASP
86
H
THR
87
n
91
THR
87
H
ALA
88
n
92
ALA
88
H
THR
89
n
93
THR
89
H
TYR
90
n
94
TYR
90
H
PHE
91
n
95
PHE
91
H
CYS
92
n
96
CYS
92
H
THR
93
n
97
THR
93
H
ARG
94
n
98
ARG
94
H
GLY
95
n
99
GLY
95
H
ASP
96
n
100
ASP
96
H
TYR
97
n
101
TYR
97
H
VAL
98
n
102
VAL
98
H
ASN
99
n
103
ASN
99
H
TRP
100
n
104
TRP
100
H
TYR
100
n
105
A
TYR
100
H
PHE
100
n
106
B
PHE
100
H
ASP
101
n
107
ASP
101
H
VAL
102
n
108
VAL
102
H
TRP
103
n
109
TRP
103
H
GLY
104
n
110
GLY
104
H
ALA
105
n
111
ALA
105
H
GLY
106
n
112
GLY
106
H
THR
107
n
113
THR
107
H
THR
108
n
114
THR
108
H
VAL
109
n
115
VAL
109
H
THR
110
n
116
THR
110
H
VAL
111
n
117
VAL
111
H
SER
112
n
118
SER
112
H
SER
113
n
119
SER
113
H
ALA
114
n
120
ALA
114
H
LYS
115
n
121
LYS
115
H
THR
116
n
122
THR
116
H
THR
117
n
123
THR
117
H
PRO
118
n
124
PRO
118
H
PRO
119
n
125
PRO
119
H
SER
120
n
126
SER
120
H
VAL
121
n
127
VAL
121
H
TYR
122
n
128
TYR
122
H
PRO
123
n
129
PRO
123
H
LEU
124
n
130
LEU
124
H
ALA
125
n
131
ALA
125
H
PRO
126
n
132
PRO
126
H
GLY
127
n
133
GLY
127
H
SER
128
n
134
SER
128
H
ALA
129
n
135
ALA
129
H
ALA
130
n
136
ALA
130
H
GLN
133
n
137
GLN
133
H
THR
134
n
138
THR
134
H
ASN
135
n
139
ASN
135
H
SER
136
n
140
SER
136
H
MET
137
n
141
MET
137
H
VAL
138
n
142
VAL
138
H
THR
139
n
143
THR
139
H
LEU
140
n
144
LEU
140
H
GLY
141
n
145
GLY
141
H
CYS
142
n
146
CYS
142
H
LEU
143
n
147
LEU
143
H
VAL
144
n
148
VAL
144
H
LYS
145
n
149
LYS
145
H
GLY
146
n
150
GLY
146
H
TYR
147
n
151
TYR
147
H
PHE
148
n
152
PHE
148
H
PRO
149
n
153
PRO
149
H
GLU
150
n
154
GLU
150
H
PRO
151
n
155
PRO
151
H
VAL
152
n
156
VAL
152
H
THR
153
n
157
THR
153
H
VAL
154
n
158
VAL
154
H
THR
156
n
159
THR
156
H
TRP
157
n
160
TRP
157
H
ASN
162
n
161
ASN
162
H
SER
163
n
162
SER
163
H
GLY
164
n
163
GLY
164
H
SER
165
n
164
SER
165
H
LEU
166
n
165
LEU
166
H
SER
167
n
166
SER
167
H
SER
168
n
167
SER
168
H
GLY
169
n
168
GLY
169
H
VAL
171
n
169
VAL
171
H
HIS
172
n
170
HIS
172
H
THR
173
n
171
THR
173
H
PHE
174
n
172
PHE
174
H
PRO
175
n
173
PRO
175
H
ALA
176
n
174
ALA
176
H
VAL
177
n
175
VAL
177
H
LEU
178
n
176
LEU
178
H
GLN
179
n
177
GLN
179
H
SER
180
n
178
SER
180
H
ASP
183
n
179
ASP
183
H
LEU
184
n
180
LEU
184
H
TYR
185
n
181
TYR
185
H
THR
186
n
182
THR
186
H
LEU
187
n
183
LEU
187
H
SER
188
n
184
SER
188
H
SER
189
n
185
SER
189
H
SER
190
n
186
SER
190
H
VAL
191
n
187
VAL
191
H
THR
192
n
188
THR
192
H
VAL
193
n
189
VAL
193
H
PRO
194
n
190
PRO
194
H
SER
195
n
191
SER
195
H
SER
196
n
192
SER
196
H
PRO
199
n
193
PRO
199
H
ARG
200
n
194
ARG
200
H
PRO
202
n
195
PRO
202
H
SER
203
n
196
SER
203
H
GLU
204
n
197
GLU
204
H
THR
205
n
198
THR
205
H
VAL
206
n
199
VAL
206
H
THR
207
n
200
THR
207
H
CYS
208
n
201
CYS
208
H
ASN
209
n
202
ASN
209
H
VAL
210
n
203
VAL
210
H
ALA
211
n
204
ALA
211
H
HIS
212
n
205
HIS
212
H
PRO
213
n
206
PRO
213
H
ALA
214
n
207
ALA
214
H
SER
215
n
208
SER
215
H
SER
216
n
209
SER
216
H
THR
217
n
210
THR
217
H
LYS
218
n
211
LYS
218
H
VAL
219
n
212
VAL
219
H
ASP
220
n
213
ASP
220
H
LYS
221
n
214
LYS
221
H
LYS
222
n
215
LYS
222
H
ILE
223
n
216
ILE
223
H
VAL
226
n
217
VAL
226
H
PRO
227
n
218
PRO
227
H
ARG
228
n
219
ARG
228
H
author_and_software_defined_assembly
PISA
2
dimeric
3950
-15
19690
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
L
O
ILE
7
A
O
ILE
7
L
N
SER
22
A
N
SER
22
L
N
CYS
23
A
N
CYS
23
L
O
PHE
71
A
O
PHE
76
L
N
LYS
74
A
N
LYS
79
L
O
SER
63
A
O
SER
68
L
O
ASN
53
A
O
ASN
58
L
N
TYR
49
A
N
TYR
54
L
O
MET
48
A
O
MET
53
L
N
TRP
35
A
N
TRP
40
L
N
GLN
38
A
N
GLN
43
L
O
ILE
85
A
O
ILE
90
L
N
GLN
90
A
N
GLN
95
L
O
THR
97
A
O
THR
102
L
O
ASN
53
A
O
ASN
58
L
N
TYR
49
A
N
TYR
54
L
O
MET
48
A
O
MET
53
L
N
TRP
35
A
N
TRP
40
L
N
GLN
38
A
N
GLN
43
L
O
ILE
85
A
O
ILE
90
L
N
TYR
86
A
N
TYR
91
L
O
THR
102
A
O
THR
107
L
N
GLU
105
A
N
GLU
110
L
O
LEU
11
A
O
LEU
11
L
N
PHE
118
A
N
PHE
123
L
O
VAL
133
A
O
VAL
138
L
O
PHE
139
A
O
PHE
144
L
N
TYR
173
A
N
TYR
178
L
N
THR
178
A
N
THR
183
L
O
LEU
160
A
O
LEU
165
L
N
ARG
155
A
N
ARG
160
L
O
TRP
148
A
O
TRP
153
L
N
LYS
149
A
N
LYS
154
L
O
THR
193
A
O
THR
198
L
N
ALA
196
A
N
ALA
201
L
O
ILE
205
A
O
ILE
210
H
N
VAL
5
B
N
VAL
5
H
O
LYS
23
B
O
LYS
23
H
O
CYS
22
B
O
CYS
22
H
N
ALA
78
B
N
ALA
79
H
O
GLU
81
B
O
GLU
82
H
N
ALA
68
B
N
ALA
69
H
N
THR
58
B
N
THR
59
H
O
TRP
50
B
O
TRP
50
H
N
ILE
51
B
N
ILE
51
H
O
VAL
34
B
O
VAL
34
H
N
GLU
39
B
N
GLU
39
H
O
THR
89
B
O
THR
93
H
N
THR
58
B
N
THR
59
H
O
TRP
50
B
O
TRP
50
H
N
ILE
51
B
N
ILE
51
H
O
VAL
34
B
O
VAL
34
H
N
GLU
39
B
N
GLU
39
H
O
THR
89
B
O
THR
93
H
N
TYR
90
B
N
TYR
94
H
O
THR
107
B
O
THR
113
H
N
THR
110
B
N
THR
116
H
O
GLU
10
B
O
GLU
10
H
N
LEU
124
B
N
LEU
130
H
O
GLY
141
B
O
GLY
145
H
O
TYR
147
B
O
TYR
151
H
N
TYR
185
B
N
TYR
181
H
O
SER
190
B
O
SER
186
H
N
HIS
172
B
N
HIS
170
H
O
THR
156
B
O
THR
159
H
N
ASN
209
B
N
ASN
202
H
N
HIS
212
B
N
HIS
205
H
O
THR
217
B
O
THR
210
1
H
O
EOH
229
C
O
EOH
1
1
N
1
H
PRO
227
11.69
1
H
H
ARG
PRO
200
202
-35.11
1
H
H
PRO
ARG
227
228
142.09
1
6.19
0.80
106.30
112.49
L
L
L
CD1
CG
CD2
TRP
TRP
TRP
35
35
35
N
1
-5.36
0.80
107.30
101.94
L
L
L
CE2
CD2
CG
TRP
TRP
TRP
35
35
35
N
1
-3.84
0.60
121.00
117.16
L
L
L
CB
CG
CD2
TYR
TYR
TYR
36
36
36
N
1
-13.40
2.20
113.40
100.00
L
L
L
CA
CB
CG
LYS
LYS
LYS
45
45
45
N
1
14.08
2.30
115.30
129.38
L
L
L
CA
CB
CG
LEU
LEU
LEU
46
46
46
N
1
-6.09
0.60
121.00
114.91
L
L
L
CB
CG
CD1
TYR
TYR
TYR
49
49
49
N
1
-3.68
0.50
120.30
116.62
L
L
L
NE
CZ
NH2
ARG
ARG
ARG
54
54
54
N
1
4.21
0.50
120.30
124.51
L
L
L
NE
CZ
NH1
ARG
ARG
ARG
77
77
77
N
1
-3.60
0.50
120.30
116.70
L
L
L
NE
CZ
NH2
ARG
ARG
ARG
77
77
77
N
1
-13.93
1.60
110.90
96.97
L
L
L
CG1
CB
CG2
VAL
VAL
VAL
133
133
133
N
1
5.16
0.80
106.30
111.46
L
L
L
CD1
CG
CD2
TRP
TRP
TRP
148
148
148
N
1
-5.27
0.80
107.30
102.03
L
L
L
CE2
CD2
CG
TRP
TRP
TRP
148
148
148
N
1
5.47
0.80
106.30
111.77
L
L
L
CD1
CG
CD2
TRP
TRP
TRP
163
163
163
N
1
-3.87
0.60
121.00
117.13
L
L
L
CB
CG
CD1
TYR
TYR
TYR
173
173
173
N
1
3.30
0.50
120.30
123.60
L
L
L
NE
CZ
NH1
ARG
ARG
ARG
211
211
211
N
1
-9.58
1.50
110.90
101.32
H
H
H
CA
CB
CG1
VAL
VAL
VAL
18
18
18
N
1
6.88
1.10
114.20
121.08
H
H
H
CA
CB
SG
CYS
CYS
CYS
22
22
22
N
1
6.70
0.80
106.30
113.00
H
H
H
CD1
CG
CD2
TRP
TRP
TRP
36
36
36
N
1
-5.61
0.80
107.30
101.69
H
H
H
CE2
CD2
CG
TRP
TRP
TRP
36
36
36
N
1
5.41
0.90
133.90
139.31
H
H
H
CG
CD2
CE3
TRP
TRP
TRP
36
36
36
N
1
6.19
0.80
106.30
112.49
H
H
H
CD1
CG
CD2
TRP
TRP
TRP
47
47
47
N
1
-6.03
0.80
107.30
101.27
H
H
H
CE2
CD2
CG
TRP
TRP
TRP
47
47
47
N
1
6.64
0.90
133.90
140.54
H
H
H
CG
CD2
CE3
TRP
TRP
TRP
47
47
47
N
1
-4.81
0.80
107.30
102.49
H
H
H
CE2
CD2
CG
TRP
TRP
TRP
50
50
50
N
1
6.13
0.50
120.30
126.43
H
H
H
NE
CZ
NH1
ARG
ARG
ARG
66
66
66
N
1
-3.39
0.50
120.30
116.91
H
H
H
NE
CZ
NH2
ARG
ARG
ARG
66
66
66
N
1
8.06
1.10
114.20
122.26
H
H
H
CA
CB
SG
CYS
CYS
CYS
92
92
92
N
1
8.40
1.40
112.40
120.80
H
H
H
CA
CB
CG2
THR
THR
THR
93
93
93
N
1
6.97
0.80
106.30
113.27
H
H
H
CD1
CG
CD2
TRP
TRP
TRP
100
100
100
N
1
-5.79
0.80
107.30
101.51
H
H
H
CE2
CD2
CG
TRP
TRP
TRP
100
100
100
N
A
A
A
1
-5.07
0.60
121.00
115.93
H
H
H
CB
CG
CD2
TYR
TYR
TYR
100
100
100
N
1
6.71
0.80
106.30
113.01
H
H
H
CD1
CG
CD2
TRP
TRP
TRP
103
103
103
N
1
-5.75
0.80
107.30
101.55
H
H
H
CE2
CD2
CG
TRP
TRP
TRP
103
103
103
N
1
-10.83
1.60
100.20
89.37
H
H
H
CG
SD
CE
MET
MET
MET
137
137
137
N
1
15.84
2.30
115.30
131.14
H
H
H
CA
CB
CG
LEU
LEU
LEU
140
140
140
N
1
-10.62
1.60
110.90
100.28
H
H
H
CG1
CB
CG2
VAL
VAL
VAL
152
152
152
N
1
5.90
0.80
106.30
112.20
H
H
H
CD1
CG
CD2
TRP
TRP
TRP
157
157
157
N
1
-5.13
0.80
107.30
102.17
H
H
H
CE2
CD2
CG
TRP
TRP
TRP
157
157
157
N
1
-14.79
2.30
115.30
100.51
H
H
H
CA
CB
CG
LEU
LEU
LEU
178
178
178
N
1
-8.76
1.40
111.70
102.94
H
H
H
CA
N
CD
PRO
PRO
PRO
199
199
199
N
1
-14.55
2.10
111.80
97.25
H
H
H
CG
CD
NE
ARG
ARG
ARG
200
200
200
N
1
7.97
0.50
120.30
128.27
H
H
H
NE
CZ
NH1
ARG
ARG
ARG
200
200
200
N
1
-7.19
0.50
120.30
113.11
H
H
H
NE
CZ
NH2
ARG
ARG
ARG
200
200
200
N
1
-9.36
1.50
110.50
101.14
H
H
H
N
CA
CB
SER
SER
SER
203
203
203
N
1
19.57
2.20
113.40
132.97
H
H
H
CA
CB
CG
LYS
LYS
LYS
222
222
222
N
1
-15.79
2.20
117.20
101.41
H
H
H
CA
C
N
PRO
PRO
ARG
227
227
228
Y
1
-25.41
2.70
111.00
85.59
H
H
H
N
CA
C
ARG
ARG
ARG
228
228
228
N
1
L
L
NE2
CD2
HIS
HIS
34
34
-0.072
0.011
1.373
1.301
N
1
L
L
CG
CD2
TRP
TRP
163
163
-0.104
0.017
1.432
1.328
N
1
L
L
NE2
CD2
HIS
HIS
198
198
-0.070
0.011
1.373
1.303
N
1
H
H
NE2
CD2
HIS
HIS
212
212
-0.076
0.011
1.373
1.297
N
1
L
GLN
42
-171.91
-176.16
1
L
VAL
51
66.37
-47.74
1
L
ASP
60
-61.29
1.25
1
L
SER
67
-177.56
149.02
1
L
ASP
110
-49.01
156.30
1
L
ASN
138
39.49
55.37
1
L
ASP
151
-151.49
74.68
1
L
SER
171
43.41
23.45
1
L
ARG
188
-106.01
47.34
1
L
LYS
199
-20.04
-59.06
1
L
THR
200
-53.45
-1.29
1
H
GLU
44
-45.84
156.36
1
H
TYR
53
-64.38
-77.86
1
H
ASP
61
-26.34
-50.69
1
H
GLU
72
-115.86
65.09
1
H
ASN
84
-36.17
-32.60
1
H
ALA
88
-177.11
-171.53
1
H
ARG
94
-63.36
99.05
1
H
VAL
98
-73.60
-73.36
1
H
SER
128
41.72
3.51
1
H
ASN
135
-120.49
-65.17
1
H
SER
136
-168.24
-16.93
1
H
SER
167
-135.90
-58.59
1
H
GLN
179
-164.75
87.88
1
H
ASP
183
82.68
-13.49
1
H
PRO
202
-67.30
14.33
0.202
0.202
2.8
6.0
17193
1
2.0
2.8
6.0
6
3360
0
0
3354
0.018
3.6
model building
X-PLOR
refinement
X-PLOR
phasing
X-PLOR
FAB' FRAGMENT OF THE DB3 ANTI-STEROID MONOCLONAL ANTIBODY (IGG1 (SUBGROUP 2A, KAPPA 1))
THREE-DIMENSIONAL STRUCTURE OF AN ANTI-STEROID FAB' AND PROGESTERONE-FAB' COMPLEX
1
N
N
2
N
N
3
N
N
3
N
N
L
GLU
79
A
GLU
84
HELX_P
L
LEU
83
A
LEU
88
5
1
5
L
SER
121
A
SER
126
HELX_P
L
THR
126
A
THR
131
1
2
6
L
THR
182
A
THR
187
HELX_P
L
ARG
188
A
ARG
193
1
3
7
H
ALA
28
B
ALA
28
HELX_P
H
ASN
31
B
ASN
31
5
4
4
H
ASP
61
B
ASP
62
HELX_P
H
LYS
64
B
LYS
65
5
5
4
H
THR
73
B
THR
74
HELX_P
H
ALA
75
B
ALA
76
5
6
3
H
LYS
83
B
LYS
87
HELX_P
H
THR
87
B
THR
91
5
7
5
H
SER
196
B
SER
192
HELX_P
H
GLU
204
B
GLU
197
1
8
6
H
PRO
213
B
PRO
206
HELX_P
H
SER
216
B
SER
209
5
9
4
disulf
2.002
L
CYS
23
A
SG
CYS
23
1_555
L
CYS
88
A
SG
CYS
93
1_555
disulf
2.018
L
CYS
134
A
SG
CYS
139
1_555
L
CYS
194
A
SG
CYS
199
1_555
disulf
1.984
H
CYS
22
B
SG
CYS
22
1_555
H
CYS
92
B
SG
CYS
96
1_555
disulf
1.995
H
CYS
142
B
SG
CYS
146
1_555
H
CYS
208
B
SG
CYS
201
1_555
IMMUNOGLOBULIN
IMMUNOGLOBULIN
L
ILE
7
A
ILE
7
1
L
PRO
8
A
PRO
8
4.24
L
VAL
94
A
VAL
99
1
L
PRO
95
A
PRO
100
26.16
L
TYR
140
A
TYR
145
1
L
PRO
141
A
PRO
146
-3.70
H
PHE
148
B
PHE
152
1
H
PRO
149
B
PRO
153
-2.44
H
GLU
150
B
GLU
154
1
H
PRO
151
B
PRO
155
-4.37
AAB09710
GB
1
1
1589925
DIVMTQSPLSLPVSLGDQASISCRSSQSVVHSNGNTYLEWFLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI
SRVEAEDLGVYYCFQASHVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER
QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRGEC
GC1_MOUSE
UNP
2
1
P01868
AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETV
TCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVE
VHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTIPPPKEQMAKDKV
SLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLHNHHTEKSLSH
SPGK
1
216
1DBA
1
211
1589925
L
1
1
216
1
100
1DBA
114
228
P01868
H
2
120
219
1
ILE
CONFLICT
VAL
2
1DBA
L
1589925
GB
2
2
1
SER
CONFLICT
ILE
7
1DBA
L
1589925
GB
7
7
1
SER
CONFLICT
ASN
14
1DBA
L
1589925
GB
14
14
1
VAL
CONFLICT
LEU
27
1DBA
B
L
1589925
GB
29
29
1
VAL
CONFLICT
ILE
27
1DBA
C
L
1589925
GB
30
30
1
GLU
CONFLICT
HIS
34
1DBA
L
1589925
GB
39
39
1
PHE
CONFLICT
TYR
36
1DBA
L
1589925
GB
41
41
1
ILE
CONFLICT
MET
48
1DBA
L
1589925
GB
53
53
1
SER
CONFLICT
TYR
56
1DBA
L
1589925
GB
61
61
1
VAL
CONFLICT
ILE
85
1DBA
L
1589925
GB
90
90
1
TYR
CONFLICT
PHE
87
1DBA
L
1589925
GB
92
92
1
PHE
CONFLICT
SER
89
1DBA
L
1589925
GB
94
94
1
ALA
CONFLICT
SER
91
1DBA
L
1589925
GB
96
96
1
TRP
CONFLICT
PRO
96
1DBA
L
1589925
GB
101
101
4
5
6
4
4
4
5
6
4
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
L
MET
4
A
MET
4
L
ILE
7
A
ILE
7
L
ALA
19
A
ALA
19
L
SER
25
A
SER
25
L
ASP
70
A
ASP
75
L
ILE
75
A
ILE
80
L
PHE
62
A
PHE
67
L
SER
67
A
SER
72
L
ASN
53
A
ASN
58
L
ARG
54
A
ARG
59
L
LYS
45
A
LYS
50
L
TYR
49
A
TYR
54
L
LEU
33
A
LEU
38
L
GLN
38
A
GLN
43
L
ILE
85
A
ILE
90
L
GLN
90
A
GLN
95
L
THR
97
A
THR
102
L
PHE
98
A
PHE
103
L
ASN
53
A
ASN
58
L
ARG
54
A
ARG
59
L
LYS
45
A
LYS
50
L
TYR
49
A
TYR
54
L
LEU
33
A
LEU
38
L
GLN
38
A
GLN
43
L
ILE
85
A
ILE
90
L
GLN
90
A
GLN
95
L
THR
102
A
THR
107
L
ILE
106
A
ILE
111
L
SER
10
A
SER
10
L
VAL
13
A
VAL
13
L
THR
114
A
THR
119
L
PHE
118
A
PHE
123
L
VAL
132
A
VAL
137
L
PHE
139
A
PHE
144
L
TYR
173
A
TYR
178
L
LEU
179
A
LEU
184
L
VAL
159
A
VAL
164
L
TRP
163
A
TRP
168
L
GLU
154
A
GLU
159
L
ARG
155
A
ARG
160
L
ASN
145
A
ASN
150
L
LYS
149
A
LYS
154
L
SER
191
A
SER
196
L
THR
197
A
THR
202
L
ILE
205
A
ILE
210
L
ASN
210
A
ASN
215
H
GLN
3
B
GLN
3
H
GLN
6
B
GLN
6
H
VAL
18
B
VAL
18
H
SER
25
B
SER
25
H
THR
77
B
THR
78
H
ILE
82
B
ILE
83
H
PHE
67
B
PHE
68
H
LEU
71
B
LEU
72
H
PRO
57
B
PRO
58
H
TYR
59
B
TYR
60
H
LEU
45
B
LEU
45
H
ASN
52
B
ASN
52
H
GLY
33
B
GLY
33
H
GLU
39
B
GLU
39
H
ALA
88
B
ALA
92
H
GLY
95
B
GLY
99
H
PRO
57
B
PRO
58
H
TYR
59
B
TYR
60
H
LEU
45
B
LEU
45
H
ASN
52
B
ASN
52
H
GLY
33
B
GLY
33
H
GLU
39
B
GLU
39
H
ALA
88
B
ALA
92
H
GLY
95
B
GLY
99
H
THR
107
B
THR
113
H
VAL
111
B
VAL
117
H
GLU
10
B
GLU
10
H
LYS
12
B
LYS
12
H
SER
120
B
SER
126
H
LEU
124
B
LEU
130
H
MET
137
B
MET
141
H
TYR
147
B
TYR
151
H
LEU
184
B
LEU
180
H
PRO
194
B
PRO
190
H
HIS
172
B
HIS
170
H
GLN
179
B
GLN
177
H
THR
153
B
THR
157
H
TRP
157
B
TRP
160
H
THR
207
B
THR
200
H
HIS
212
B
HIS
205
H
THR
217
B
THR
210
H
LYS
222
B
LYS
215
BINDING SITE FOR RESIDUE EOH H 229
Software
2
BINDING SITE FOR RESIDUE EOH H 230
Software
2
H
TRP
100
B
TRP
104
2
1_555
L
TYR
32
A
TYR
37
2
1_555
H
ASN
35
B
ASN
35
2
1_555
H
TRP
100
B
TRP
104
2
1_555
181
P 64 2 2