0.007421 0.004284 0.000000 0.000000 0.008569 0.000000 0.000000 0.000000 0.008051 0.00000 0.00000 0.00000 CIS PROLINE - PRO L 8 CIS PROLINE - PRO L 95 CIS PROLINE - PRO L 141 ILE L 150 - ASP L 151 OMEGA =149.67 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION THR H 134 - ASN H 135 OMEGA =149.74 PEPTIDE BOND DEVIATES SIGNIFICANTLY FROM TRANS CONFORMATION CIS PROLINE - PRO H 149 CIS PROLINE - PRO H 151 Arevalo, J.H. Wilson, I.A. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 12 90.00 90.00 120.00 134.760 134.760 124.210 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C21 H30 O2 314.462 PROGESTERONE non-polymer C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 231 103 118 10.1006/jmbi.1993.1260 8496956 Three-dimensional structure of an anti-steroid Fab' and progesterone-Fab' complex. 1993 UK Immunology IMMUAM 0753 0019-2805 62 511 Analysis of an Anti-Progesterone Antibody: Variable Crystal Morphology of the Fab' and Steroid-Fab' Complexes 1987 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 1 x-ray 1 1.0 23880.588 IGG1-KAPPA DB3 FAB (LIGHT CHAIN) 1 man polymer 23754.656 IGG1-KAPPA DB3 FAB (HEAVY CHAIN) 1 man polymer 314.462 PROGESTERONE 1 syn non-polymer no no DVVMTQIPLSLPVNLGDQASISCRSSQSLIHSNGNTYLHWYLQKPGQSPKLLMYKVSNRFYGVPDRFSGSGSGTDFTLKI SRVEAEDLGIYFCSQSSHVPPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR DVVMTQIPLSLPVNLGDQASISCRSSQSLIHSNGNTYLHWYLQKPGQSPKLLMYKVSNRFYGVPDRFSGSGSGTDFTLKI SRVEAEDLGIYFCSQSSHVPPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR L polypeptide(L) no no QIQLVQSGPELKKPGETVKISCKASGYAFTNYGVNWVKEAPGKELKWMGWINIYTGEPTYVDDFKGRFAFSLETSASTAY LEINNLKNEDTATYFCTRGDYVNWYFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW NSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPR QIQLVQSGPELKKPGETVKISCKASGYAFTNYGVNWVKEAPGKELKWMGWINIYTGEPTYVDDFKGRFAFSLETSASTAY LEINNLKNEDTATYFCTRGDYVNWYFDVWGAGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTW NSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPR H polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse sample HYBRIDOMA 10090 Mus musculus house mouse sample HYBRIDOMA 10090 Mus musculus 3.42 63.99 repository Initial release Version format compliance Version format compliance 1 0 1993-10-31 1 1 2008-03-24 1 2 2011-07-13 Y 1992-11-11 REL STR PROGESTERONE THE SEQUENCE SUPPLIED IS THAT OF THE AUTHORS AND IT IS DESCRIBED IN REFERENCE 1 ABOVE. STR 1 3 STR STR 229 H ASP 1 n 1 ASP 1 L VAL 2 n 2 VAL 2 L VAL 3 n 3 VAL 3 L MET 4 n 4 MET 4 L THR 5 n 5 THR 5 L GLN 6 n 6 GLN 6 L ILE 7 n 7 ILE 7 L PRO 8 n 8 PRO 8 L LEU 9 n 9 LEU 9 L SER 10 n 10 SER 10 L LEU 11 n 11 LEU 11 L PRO 12 n 12 PRO 12 L VAL 13 n 13 VAL 13 L ASN 14 n 14 ASN 14 L LEU 15 n 15 LEU 15 L GLY 16 n 16 GLY 16 L ASP 17 n 17 ASP 17 L GLN 18 n 18 GLN 18 L ALA 19 n 19 ALA 19 L SER 20 n 20 SER 20 L ILE 21 n 21 ILE 21 L SER 22 n 22 SER 22 L CYS 23 n 23 CYS 23 L ARG 24 n 24 ARG 24 L SER 25 n 25 SER 25 L SER 26 n 26 SER 26 L GLN 27 n 27 GLN 27 L SER 27 n 28 A SER 27 L LEU 27 n 29 B LEU 27 L ILE 27 n 30 C ILE 27 L HIS 27 n 31 D HIS 27 L SER 27 n 32 E SER 27 L ASN 28 n 33 ASN 28 L GLY 29 n 34 GLY 29 L ASN 30 n 35 ASN 30 L THR 31 n 36 THR 31 L TYR 32 n 37 TYR 32 L LEU 33 n 38 LEU 33 L HIS 34 n 39 HIS 34 L TRP 35 n 40 TRP 35 L TYR 36 n 41 TYR 36 L LEU 37 n 42 LEU 37 L GLN 38 n 43 GLN 38 L LYS 39 n 44 LYS 39 L PRO 40 n 45 PRO 40 L GLY 41 n 46 GLY 41 L GLN 42 n 47 GLN 42 L SER 43 n 48 SER 43 L PRO 44 n 49 PRO 44 L LYS 45 n 50 LYS 45 L LEU 46 n 51 LEU 46 L LEU 47 n 52 LEU 47 L MET 48 n 53 MET 48 L TYR 49 n 54 TYR 49 L LYS 50 n 55 LYS 50 L VAL 51 n 56 VAL 51 L SER 52 n 57 SER 52 L ASN 53 n 58 ASN 53 L ARG 54 n 59 ARG 54 L PHE 55 n 60 PHE 55 L TYR 56 n 61 TYR 56 L GLY 57 n 62 GLY 57 L VAL 58 n 63 VAL 58 L PRO 59 n 64 PRO 59 L ASP 60 n 65 ASP 60 L ARG 61 n 66 ARG 61 L PHE 62 n 67 PHE 62 L SER 63 n 68 SER 63 L GLY 64 n 69 GLY 64 L SER 65 n 70 SER 65 L GLY 66 n 71 GLY 66 L SER 67 n 72 SER 67 L GLY 68 n 73 GLY 68 L THR 69 n 74 THR 69 L ASP 70 n 75 ASP 70 L PHE 71 n 76 PHE 71 L THR 72 n 77 THR 72 L LEU 73 n 78 LEU 73 L LYS 74 n 79 LYS 74 L ILE 75 n 80 ILE 75 L SER 76 n 81 SER 76 L ARG 77 n 82 ARG 77 L VAL 78 n 83 VAL 78 L GLU 79 n 84 GLU 79 L ALA 80 n 85 ALA 80 L GLU 81 n 86 GLU 81 L ASP 82 n 87 ASP 82 L LEU 83 n 88 LEU 83 L GLY 84 n 89 GLY 84 L ILE 85 n 90 ILE 85 L TYR 86 n 91 TYR 86 L PHE 87 n 92 PHE 87 L CYS 88 n 93 CYS 88 L SER 89 n 94 SER 89 L GLN 90 n 95 GLN 90 L SER 91 n 96 SER 91 L SER 92 n 97 SER 92 L HIS 93 n 98 HIS 93 L VAL 94 n 99 VAL 94 L PRO 95 n 100 PRO 95 L PRO 96 n 101 PRO 96 L THR 97 n 102 THR 97 L PHE 98 n 103 PHE 98 L GLY 99 n 104 GLY 99 L GLY 100 n 105 GLY 100 L GLY 101 n 106 GLY 101 L THR 102 n 107 THR 102 L LYS 103 n 108 LYS 103 L LEU 104 n 109 LEU 104 L GLU 105 n 110 GLU 105 L ILE 106 n 111 ILE 106 L LYS 107 n 112 LYS 107 L ARG 108 n 113 ARG 108 L ALA 109 n 114 ALA 109 L ASP 110 n 115 ASP 110 L ALA 111 n 116 ALA 111 L ALA 112 n 117 ALA 112 L PRO 113 n 118 PRO 113 L THR 114 n 119 THR 114 L VAL 115 n 120 VAL 115 L SER 116 n 121 SER 116 L ILE 117 n 122 ILE 117 L PHE 118 n 123 PHE 118 L PRO 119 n 124 PRO 119 L PRO 120 n 125 PRO 120 L SER 121 n 126 SER 121 L SER 122 n 127 SER 122 L GLU 123 n 128 GLU 123 L GLN 124 n 129 GLN 124 L LEU 125 n 130 LEU 125 L THR 126 n 131 THR 126 L SER 127 n 132 SER 127 L GLY 128 n 133 GLY 128 L GLY 129 n 134 GLY 129 L ALA 130 n 135 ALA 130 L SER 131 n 136 SER 131 L VAL 132 n 137 VAL 132 L VAL 133 n 138 VAL 133 L CYS 134 n 139 CYS 134 L PHE 135 n 140 PHE 135 L LEU 136 n 141 LEU 136 L ASN 137 n 142 ASN 137 L ASN 138 n 143 ASN 138 L PHE 139 n 144 PHE 139 L TYR 140 n 145 TYR 140 L PRO 141 n 146 PRO 141 L LYS 142 n 147 LYS 142 L ASP 143 n 148 ASP 143 L ILE 144 n 149 ILE 144 L ASN 145 n 150 ASN 145 L VAL 146 n 151 VAL 146 L LYS 147 n 152 LYS 147 L TRP 148 n 153 TRP 148 L LYS 149 n 154 LYS 149 L ILE 150 n 155 ILE 150 L ASP 151 n 156 ASP 151 L GLY 152 n 157 GLY 152 L SER 153 n 158 SER 153 L GLU 154 n 159 GLU 154 L ARG 155 n 160 ARG 155 L GLN 156 n 161 GLN 156 L ASN 157 n 162 ASN 157 L GLY 158 n 163 GLY 158 L VAL 159 n 164 VAL 159 L LEU 160 n 165 LEU 160 L ASN 161 n 166 ASN 161 L SER 162 n 167 SER 162 L TRP 163 n 168 TRP 163 L THR 164 n 169 THR 164 L ASP 165 n 170 ASP 165 L GLN 166 n 171 GLN 166 L ASP 167 n 172 ASP 167 L SER 168 n 173 SER 168 L LYS 169 n 174 LYS 169 L ASP 170 n 175 ASP 170 L SER 171 n 176 SER 171 L THR 172 n 177 THR 172 L TYR 173 n 178 TYR 173 L SER 174 n 179 SER 174 L MET 175 n 180 MET 175 L SER 176 n 181 SER 176 L SER 177 n 182 SER 177 L THR 178 n 183 THR 178 L LEU 179 n 184 LEU 179 L THR 180 n 185 THR 180 L LEU 181 n 186 LEU 181 L THR 182 n 187 THR 182 L LYS 183 n 188 LYS 183 L ASP 184 n 189 ASP 184 L GLU 185 n 190 GLU 185 L TYR 186 n 191 TYR 186 L GLU 187 n 192 GLU 187 L ARG 188 n 193 ARG 188 L HIS 189 n 194 HIS 189 L ASN 190 n 195 ASN 190 L SER 191 n 196 SER 191 L TYR 192 n 197 TYR 192 L THR 193 n 198 THR 193 L CYS 194 n 199 CYS 194 L GLU 195 n 200 GLU 195 L ALA 196 n 201 ALA 196 L THR 197 n 202 THR 197 L HIS 198 n 203 HIS 198 L LYS 199 n 204 LYS 199 L THR 200 n 205 THR 200 L SER 201 n 206 SER 201 L THR 202 n 207 THR 202 L SER 203 n 208 SER 203 L PRO 204 n 209 PRO 204 L ILE 205 n 210 ILE 205 L VAL 206 n 211 VAL 206 L LYS 207 n 212 LYS 207 L SER 208 n 213 SER 208 L PHE 209 n 214 PHE 209 L ASN 210 n 215 ASN 210 L ARG 211 n 216 ARG 211 L GLN 1 n 1 GLN 1 H ILE 2 n 2 ILE 2 H GLN 3 n 3 GLN 3 H LEU 4 n 4 LEU 4 H VAL 5 n 5 VAL 5 H GLN 6 n 6 GLN 6 H SER 7 n 7 SER 7 H GLY 8 n 8 GLY 8 H PRO 9 n 9 PRO 9 H GLU 10 n 10 GLU 10 H LEU 11 n 11 LEU 11 H LYS 12 n 12 LYS 12 H LYS 13 n 13 LYS 13 H PRO 14 n 14 PRO 14 H GLY 15 n 15 GLY 15 H GLU 16 n 16 GLU 16 H THR 17 n 17 THR 17 H VAL 18 n 18 VAL 18 H LYS 19 n 19 LYS 19 H ILE 20 n 20 ILE 20 H SER 21 n 21 SER 21 H CYS 22 n 22 CYS 22 H LYS 23 n 23 LYS 23 H ALA 24 n 24 ALA 24 H SER 25 n 25 SER 25 H GLY 26 n 26 GLY 26 H TYR 27 n 27 TYR 27 H ALA 28 n 28 ALA 28 H PHE 29 n 29 PHE 29 H THR 30 n 30 THR 30 H ASN 31 n 31 ASN 31 H TYR 32 n 32 TYR 32 H GLY 33 n 33 GLY 33 H VAL 34 n 34 VAL 34 H ASN 35 n 35 ASN 35 H TRP 36 n 36 TRP 36 H VAL 37 n 37 VAL 37 H LYS 38 n 38 LYS 38 H GLU 39 n 39 GLU 39 H ALA 40 n 40 ALA 40 H PRO 41 n 41 PRO 41 H GLY 42 n 42 GLY 42 H LYS 43 n 43 LYS 43 H GLU 44 n 44 GLU 44 H LEU 45 n 45 LEU 45 H LYS 46 n 46 LYS 46 H TRP 47 n 47 TRP 47 H MET 48 n 48 MET 48 H GLY 49 n 49 GLY 49 H TRP 50 n 50 TRP 50 H ILE 51 n 51 ILE 51 H ASN 52 n 52 ASN 52 H ILE 52 n 53 A ILE 52 H TYR 53 n 54 TYR 53 H THR 54 n 55 THR 54 H GLY 55 n 56 GLY 55 H GLU 56 n 57 GLU 56 H PRO 57 n 58 PRO 57 H THR 58 n 59 THR 58 H TYR 59 n 60 TYR 59 H VAL 60 n 61 VAL 60 H ASP 61 n 62 ASP 61 H ASP 62 n 63 ASP 62 H PHE 63 n 64 PHE 63 H LYS 64 n 65 LYS 64 H GLY 65 n 66 GLY 65 H ARG 66 n 67 ARG 66 H PHE 67 n 68 PHE 67 H ALA 68 n 69 ALA 68 H PHE 69 n 70 PHE 69 H SER 70 n 71 SER 70 H LEU 71 n 72 LEU 71 H GLU 72 n 73 GLU 72 H THR 73 n 74 THR 73 H SER 74 n 75 SER 74 H ALA 75 n 76 ALA 75 H SER 76 n 77 SER 76 H THR 77 n 78 THR 77 H ALA 78 n 79 ALA 78 H TYR 79 n 80 TYR 79 H LEU 80 n 81 LEU 80 H GLU 81 n 82 GLU 81 H ILE 82 n 83 ILE 82 H ASN 82 n 84 A ASN 82 H ASN 82 n 85 B ASN 82 H LEU 82 n 86 C LEU 82 H LYS 83 n 87 LYS 83 H ASN 84 n 88 ASN 84 H GLU 85 n 89 GLU 85 H ASP 86 n 90 ASP 86 H THR 87 n 91 THR 87 H ALA 88 n 92 ALA 88 H THR 89 n 93 THR 89 H TYR 90 n 94 TYR 90 H PHE 91 n 95 PHE 91 H CYS 92 n 96 CYS 92 H THR 93 n 97 THR 93 H ARG 94 n 98 ARG 94 H GLY 95 n 99 GLY 95 H ASP 96 n 100 ASP 96 H TYR 97 n 101 TYR 97 H VAL 98 n 102 VAL 98 H ASN 99 n 103 ASN 99 H TRP 100 n 104 TRP 100 H TYR 100 n 105 A TYR 100 H PHE 100 n 106 B PHE 100 H ASP 101 n 107 ASP 101 H VAL 102 n 108 VAL 102 H TRP 103 n 109 TRP 103 H GLY 104 n 110 GLY 104 H ALA 105 n 111 ALA 105 H GLY 106 n 112 GLY 106 H THR 107 n 113 THR 107 H THR 108 n 114 THR 108 H VAL 109 n 115 VAL 109 H THR 110 n 116 THR 110 H VAL 111 n 117 VAL 111 H SER 112 n 118 SER 112 H SER 113 n 119 SER 113 H ALA 114 n 120 ALA 114 H LYS 115 n 121 LYS 115 H THR 116 n 122 THR 116 H THR 117 n 123 THR 117 H PRO 118 n 124 PRO 118 H PRO 119 n 125 PRO 119 H SER 120 n 126 SER 120 H VAL 121 n 127 VAL 121 H TYR 122 n 128 TYR 122 H PRO 123 n 129 PRO 123 H LEU 124 n 130 LEU 124 H ALA 125 n 131 ALA 125 H PRO 126 n 132 PRO 126 H GLY 127 n 133 GLY 127 H SER 128 n 134 SER 128 H ALA 129 n 135 ALA 129 H ALA 130 n 136 ALA 130 H GLN 133 n 137 GLN 133 H THR 134 n 138 THR 134 H ASN 135 n 139 ASN 135 H SER 136 n 140 SER 136 H MET 137 n 141 MET 137 H VAL 138 n 142 VAL 138 H THR 139 n 143 THR 139 H LEU 140 n 144 LEU 140 H GLY 141 n 145 GLY 141 H CYS 142 n 146 CYS 142 H LEU 143 n 147 LEU 143 H VAL 144 n 148 VAL 144 H LYS 145 n 149 LYS 145 H GLY 146 n 150 GLY 146 H TYR 147 n 151 TYR 147 H PHE 148 n 152 PHE 148 H PRO 149 n 153 PRO 149 H GLU 150 n 154 GLU 150 H PRO 151 n 155 PRO 151 H VAL 152 n 156 VAL 152 H THR 153 n 157 THR 153 H VAL 154 n 158 VAL 154 H THR 156 n 159 THR 156 H TRP 157 n 160 TRP 157 H ASN 162 n 161 ASN 162 H SER 163 n 162 SER 163 H GLY 164 n 163 GLY 164 H SER 165 n 164 SER 165 H LEU 166 n 165 LEU 166 H SER 167 n 166 SER 167 H SER 168 n 167 SER 168 H GLY 169 n 168 GLY 169 H VAL 171 n 169 VAL 171 H HIS 172 n 170 HIS 172 H THR 173 n 171 THR 173 H PHE 174 n 172 PHE 174 H PRO 175 n 173 PRO 175 H ALA 176 n 174 ALA 176 H VAL 177 n 175 VAL 177 H LEU 178 n 176 LEU 178 H GLN 179 n 177 GLN 179 H SER 180 n 178 SER 180 H ASP 183 n 179 ASP 183 H LEU 184 n 180 LEU 184 H TYR 185 n 181 TYR 185 H THR 186 n 182 THR 186 H LEU 187 n 183 LEU 187 H SER 188 n 184 SER 188 H SER 189 n 185 SER 189 H SER 190 n 186 SER 190 H VAL 191 n 187 VAL 191 H THR 192 n 188 THR 192 H VAL 193 n 189 VAL 193 H PRO 194 n 190 PRO 194 H SER 195 n 191 SER 195 H SER 196 n 192 SER 196 H PRO 199 n 193 PRO 199 H ARG 200 n 194 ARG 200 H PRO 202 n 195 PRO 202 H SER 203 n 196 SER 203 H GLU 204 n 197 GLU 204 H THR 205 n 198 THR 205 H VAL 206 n 199 VAL 206 H THR 207 n 200 THR 207 H CYS 208 n 201 CYS 208 H ASN 209 n 202 ASN 209 H VAL 210 n 203 VAL 210 H ALA 211 n 204 ALA 211 H HIS 212 n 205 HIS 212 H PRO 213 n 206 PRO 213 H ALA 214 n 207 ALA 214 H SER 215 n 208 SER 215 H SER 216 n 209 SER 216 H THR 217 n 210 THR 217 H LYS 218 n 211 LYS 218 H VAL 219 n 212 VAL 219 H ASP 220 n 213 ASP 220 H LYS 221 n 214 LYS 221 H LYS 222 n 215 LYS 222 H ILE 223 n 216 ILE 223 H VAL 226 n 217 VAL 226 H PRO 227 n 218 PRO 227 H ARG 228 n 219 ARG 228 H author_and_software_defined_assembly PISA 2 dimeric 4230 -22 19820 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 L N ILE 7 A N ILE 7 L O SER 22 A O SER 22 L N CYS 23 A N CYS 23 L O PHE 71 A O PHE 76 L N ASP 70 A N ASP 75 L O SER 67 A O SER 72 L O ASN 53 A O ASN 58 L N TYR 49 A N TYR 54 L N LEU 47 A N LEU 52 L O TRP 35 A O TRP 40 L O GLN 38 A O GLN 43 L N ILE 85 A N ILE 90 L N GLN 90 A N GLN 95 L O THR 97 A O THR 102 L O PHE 118 A O PHE 123 L N VAL 133 A N VAL 138 L O PHE 139 A O PHE 144 L N TYR 173 A N TYR 178 L N THR 178 A N THR 183 L O LEU 160 A O LEU 165 L O LYS 149 A O LYS 154 L N THR 193 A N THR 198 H O VAL 5 B O VAL 5 H N LYS 23 B N LYS 23 H O CYS 22 B O CYS 22 H N ALA 78 B N ALA 79 H N TYR 79 B N TYR 80 H O SER 70 B O SER 71 H N LEU 124 B N LEU 130 H O GLY 141 B O GLY 145 H O TYR 147 B O TYR 151 H N TYR 185 B N TYR 181 H O SER 188 B O SER 184 H N PHE 174 B N PHE 172 H O THR 156 B O THR 159 H N ASN 209 B N ASN 202 H N HIS 212 B N HIS 205 H O THR 217 B O THR 210 1 L L ILE ASP 150 151 149.67 1 H H ALA GLN 130 133 145.69 1 H H THR ASN 134 135 149.74 1 H H ARG PRO 200 202 -46.98 1 -4.26 0.60 121.00 116.74 L L L CB CG CD1 TYR TYR TYR 32 32 32 N 1 7.12 0.80 106.30 113.42 L L L CD1 CG CD2 TRP TRP TRP 35 35 35 N 1 -6.03 1.00 110.10 104.07 L L L CG CD1 NE1 TRP TRP TRP 35 35 35 N 1 -5.63 0.80 107.30 101.67 L L L CE2 CD2 CG TRP TRP TRP 35 35 35 N 1 -3.91 0.60 121.00 117.09 L L L CB CG CD2 TYR TYR TYR 36 36 36 N 1 15.06 2.30 115.30 130.36 L L L CA CB CG LEU LEU LEU 46 46 46 N 1 -9.83 1.60 110.90 101.07 L L L CG1 CB CG2 VAL VAL VAL 94 94 94 N 1 -9.12 1.20 103.80 94.68 L L L N CD CG PRO PRO PRO 95 95 95 N 1 13.49 2.20 113.40 126.89 L L L CA CB CG LYS LYS LYS 103 103 103 N 1 8.12 1.10 114.20 122.32 L L L CA CB SG CYS CYS CYS 134 134 134 N 1 -12.20 2.00 111.60 99.40 L L L CB CA C ILE ILE ILE 144 144 144 N 1 5.91 0.80 106.30 112.21 L L L CD1 CG CD2 TRP TRP TRP 148 148 148 N 1 -5.57 0.80 107.30 101.73 L L L CE2 CD2 CG TRP TRP TRP 148 148 148 N 1 5.30 0.50 120.30 125.60 L L L NE CZ NH1 ARG ARG ARG 155 155 155 N 1 -5.93 0.50 120.30 114.37 L L L NE CZ NH2 ARG ARG ARG 155 155 155 N 1 -10.25 1.60 122.70 112.45 L L L O C N GLN GLN ASN 156 156 157 Y 1 6.66 0.80 106.30 112.96 L L L CD1 CG CD2 TRP TRP TRP 163 163 163 N 1 -6.25 1.00 110.10 103.85 L L L CG CD1 NE1 TRP TRP TRP 163 163 163 N 1 -5.80 0.80 107.30 101.50 L L L CE2 CD2 CG TRP TRP TRP 163 163 163 N 1 5.51 0.90 118.30 123.81 L L L CB CG OD1 ASP ASP ASP 167 167 167 N 1 -4.81 0.60 121.00 116.19 L L L CB CG CD2 TYR TYR TYR 173 173 173 N 1 -13.99 2.20 113.40 99.41 L L L CA CB CG ASP ASP ASP 184 184 184 N 1 3.55 0.50 120.30 123.85 L L L NE CZ NH1 ARG ARG ARG 188 188 188 N 1 5.86 0.50 120.30 126.16 L L L NE CZ NH1 ARG ARG ARG 211 211 211 N 1 -3.55 0.50 120.30 116.75 L L L NE CZ NH2 ARG ARG ARG 211 211 211 N 1 13.91 2.30 115.30 129.21 H H H CA CB CG LEU LEU LEU 11 11 11 N 1 4.84 0.80 106.30 111.14 H H H CD1 CG CD2 TRP TRP TRP 36 36 36 N 1 -4.88 0.80 107.30 102.42 H H H CE2 CD2 CG TRP TRP TRP 36 36 36 N 1 -18.36 2.70 111.00 92.64 H H H N CA C LEU LEU LEU 45 45 45 N 1 6.64 0.80 106.30 112.94 H H H CD1 CG CD2 TRP TRP TRP 47 47 47 N 1 -6.10 1.00 110.10 104.00 H H H CG CD1 NE1 TRP TRP TRP 47 47 47 N 1 -6.29 0.80 107.30 101.01 H H H CE2 CD2 CG TRP TRP TRP 47 47 47 N 1 5.57 0.90 133.90 139.47 H H H CG CD2 CE3 TRP TRP TRP 47 47 47 N 1 -4.83 0.80 107.30 102.47 H H H CE2 CD2 CG TRP TRP TRP 50 50 50 N 1 5.09 0.50 120.30 125.39 H H H NE CZ NH1 ARG ARG ARG 66 66 66 N C C C 1 16.21 2.30 115.30 131.51 H H H CA CB CG LEU LEU LEU 82 82 82 N 1 9.07 1.10 114.20 123.27 H H H CA CB SG CYS CYS CYS 92 92 92 N 1 -9.21 1.40 112.40 103.19 H H H CA CB CG2 THR THR THR 93 93 93 N 1 3.08 0.50 120.30 123.38 H H H NE CZ NH2 ARG ARG ARG 94 94 94 N A A A 1 -7.31 0.60 121.00 113.69 H H H CB CG CD2 TYR TYR TYR 100 100 100 N A A A 1 4.46 0.60 121.00 125.46 H H H CB CG CD1 TYR TYR TYR 100 100 100 N 1 6.77 0.80 106.30 113.07 H H H CD1 CG CD2 TRP TRP TRP 103 103 103 N 1 -5.97 0.80 107.30 101.33 H H H CE2 CD2 CG TRP TRP TRP 103 103 103 N 1 6.35 0.90 133.90 140.25 H H H CG CD2 CE3 TRP TRP TRP 103 103 103 N 1 -13.75 2.20 117.20 103.45 H H H CA C N SER SER ALA 128 128 129 Y 1 16.74 2.30 115.30 132.04 H H H CA CB CG LEU LEU LEU 140 140 140 N 1 7.71 1.20 118.70 126.41 H H H CE2 CD2 CE3 TRP TRP TRP 157 157 157 N 1 -5.12 0.80 107.30 102.18 H H H CE2 CD2 CG TRP TRP TRP 157 157 157 N 1 -12.47 1.60 110.90 98.43 H H H CG1 CB CG2 VAL VAL VAL 171 171 171 N 1 16.00 2.20 117.20 133.20 H H H CA C N PRO PRO ARG 199 199 200 Y 1 6.28 0.50 120.30 126.58 H H H NE CZ NH1 ARG ARG ARG 200 200 200 N 1 9.24 1.10 114.20 123.44 H H H CA CB SG CYS CYS CYS 208 208 208 N 1 4.23 0.70 109.00 113.23 H H H CE1 NE2 CD2 HIS HIS HIS 212 212 212 N 1 11.15 1.60 122.70 133.85 H H H O C N PRO PRO ARG 227 227 228 Y 1 -3.53 0.50 120.30 116.77 H H H NE CZ NH2 ARG ARG ARG 228 228 228 N 1 -16.60 2.70 111.00 94.40 H H H N CA C ARG ARG ARG 228 228 228 N 1 L L NE2 CD2 HIS HIS 34 34 -0.072 0.011 1.373 1.301 N 1 L L NE2 CD2 HIS HIS 93 93 -0.069 0.011 1.373 1.304 N 1 L L NE2 CD2 HIS HIS 189 189 -0.068 0.011 1.373 1.305 N 1 L L NE2 CD2 HIS HIS 198 198 -0.083 0.011 1.373 1.290 N 1 H H NE2 CD2 HIS HIS 172 172 -0.085 0.011 1.373 1.288 N 1 H H NE2 CD2 HIS HIS 212 212 -0.071 0.011 1.373 1.302 N 1 L PRO 8 -72.93 -158.18 1 L LEU 15 -48.14 157.63 1 L SER 26 -68.26 -75.93 1 L GLN 27 -79.86 -168.96 1 L GLN 42 -154.34 -155.38 1 L VAL 51 73.14 -39.34 1 L PHE 55 -94.27 -158.20 1 L VAL 58 -38.07 136.08 1 L ASP 60 -34.89 -37.64 1 L THR 114 -55.40 106.71 1 L ASN 138 28.42 50.38 1 L ASP 151 -123.43 -74.62 1 L VAL 159 -38.54 98.61 1 L ASP 167 -57.52 95.29 1 L TYR 186 -61.03 -72.28 1 L GLU 187 -63.07 16.30 1 L SER 191 41.26 103.19 1 L THR 200 -57.82 18.84 1 H PRO 14 -45.75 168.75 1 H PRO 41 -45.14 108.17 1 H LYS 43 -115.55 -163.72 1 H LEU 45 -69.35 99.75 1 H MET 48 -98.19 -78.08 1 H TRP 50 -179.93 145.14 1 H THR 73 -39.96 -35.84 1 H ASP 86 -90.71 53.17 1 H ALA 88 -163.38 -163.46 1 H VAL 98 -81.31 -79.30 1 H SER 128 -23.51 68.38 1 H GLN 133 20.92 42.72 1 H ASN 135 -165.09 -76.04 1 H SER 136 -155.37 16.45 1 H ASN 162 38.52 40.64 1 H PRO 175 -22.67 142.24 1 H LEU 178 -119.71 77.90 1 H SER 180 48.14 77.71 1 H ASP 183 75.56 -37.08 1 H PRO 202 -68.55 3.64 1 H ALA 214 -66.09 34.23 1 H SER 215 -166.02 -13.13 0.21 0.21 2.7 1 2.7 0 3377 23 0 3354 0.018 3.90 model building X-PLOR refinement X-PLOR phasing X-PLOR FAB' FRAGMENT OF THE DB3 ANTI-STEROID MONOCLONAL ANTIBODY (IGG1, SUBGROUP 2A, KAPPA 1) COMPLEX WITH PROGESTERONE THREE-DIMENSIONAL STRUCTURE OF AN ANTI-STEROID FAB' AND PROGESTERONE-FAB' COMPLEX 1 N N 2 N N 3 N N L SER 121 A SER 126 HELX_P L SER 127 A SER 132 1 1 7 L THR 182 A THR 187 HELX_P L ARG 188 A ARG 193 1 2 7 H ALA 28 B ALA 28 HELX_P H ASN 31 B ASN 31 5 3 4 H THR 73 B THR 74 HELX_P H ALA 75 B ALA 76 5 4 3 H SER 163 B SER 162 HELX_P H SER 165 B SER 164 5 5 3 H SER 196 B SER 192 HELX_P H GLU 204 B GLU 197 1 6 6 disulf 2.027 L CYS 23 A SG CYS 23 1_555 L CYS 88 A SG CYS 93 1_555 disulf 2.001 L CYS 134 A SG CYS 139 1_555 L CYS 194 A SG CYS 199 1_555 disulf 1.996 H CYS 22 B SG CYS 22 1_555 H CYS 92 B SG CYS 96 1_555 disulf 1.998 H CYS 142 B SG CYS 146 1_555 H CYS 208 B SG CYS 201 1_555 IMMUNOGLOBULIN IMMUNOGLOBULIN L ILE 7 A ILE 7 1 L PRO 8 A PRO 8 -0.80 L VAL 94 A VAL 99 1 L PRO 95 A PRO 100 18.79 L TYR 140 A TYR 145 1 L PRO 141 A PRO 146 22.84 H PHE 148 B PHE 152 1 H PRO 149 B PRO 153 -20.07 H GLU 150 B GLU 154 1 H PRO 151 B PRO 155 1.03 AAB09710 GB 1 1 1589925 DIVMTQSPLSLPVSLGDQASISCRSSQSVVHSNGNTYLEWFLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKI SRVEAEDLGVYYCFQASHVPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSER QNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRGEC GC1_MOUSE UNP 2 1 P01868 AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETV TCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVE VHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTIPPPKEQMAKDKV SLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGLHNHHTEKSLSH SPGK 1 216 1DBB 1 211 1589925 L 1 1 216 1 100 1DBB 114 228 P01868 H 2 120 219 1 ILE CONFLICT VAL 2 1DBB L 1589925 GB 2 2 1 SER CONFLICT ILE 7 1DBB L 1589925 GB 7 7 1 SER CONFLICT ASN 14 1DBB L 1589925 GB 14 14 1 VAL CONFLICT LEU 27 1DBB B L 1589925 GB 29 29 1 VAL CONFLICT ILE 27 1DBB C L 1589925 GB 30 30 1 GLU CONFLICT HIS 34 1DBB L 1589925 GB 39 39 1 PHE CONFLICT TYR 36 1DBB L 1589925 GB 41 41 1 ILE CONFLICT MET 48 1DBB L 1589925 GB 53 53 1 SER CONFLICT TYR 56 1DBB L 1589925 GB 61 61 1 VAL CONFLICT ILE 85 1DBB L 1589925 GB 90 90 1 TYR CONFLICT PHE 87 1DBB L 1589925 GB 92 92 1 PHE CONFLICT SER 89 1DBB L 1589925 GB 94 94 1 ALA CONFLICT SER 91 1DBB L 1589925 GB 96 96 1 TRP CONFLICT PRO 96 1DBB L 1589925 GB 101 101 4 5 4 2 4 4 3 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel L MET 4 A MET 4 L ILE 7 A ILE 7 L ALA 19 A ALA 19 L SER 25 A SER 25 L ASP 70 A ASP 75 L ILE 75 A ILE 80 L GLY 66 A GLY 71 L SER 67 A SER 72 L ASN 53 A ASN 58 L ARG 54 A ARG 59 L LYS 45 A LYS 50 L TYR 49 A TYR 54 L LEU 33 A LEU 38 L GLN 38 A GLN 43 L ILE 85 A ILE 90 L GLN 90 A GLN 95 L THR 97 A THR 102 L GLY 99 A GLY 104 L THR 114 A THR 119 L PHE 118 A PHE 123 L ALA 130 A ALA 135 L PHE 139 A PHE 144 L TYR 173 A TYR 178 L LEU 181 A LEU 186 L LEU 160 A LEU 165 L TRP 163 A TRP 168 L VAL 146 A VAL 151 L LYS 149 A LYS 154 L THR 193 A THR 198 L ALA 196 A ALA 201 H GLN 3 B GLN 3 H GLN 6 B GLN 6 H VAL 18 B VAL 18 H SER 25 B SER 25 H THR 77 B THR 78 H ILE 82 B ILE 83 H SER 70 B SER 71 H GLU 72 B GLU 73 H SER 120 B SER 126 H LEU 124 B LEU 130 H MET 137 B MET 141 H TYR 147 B TYR 151 H TYR 185 B TYR 181 H PRO 194 B PRO 190 H PHE 174 B PHE 172 H VAL 177 B VAL 175 H THR 153 B THR 157 H TRP 157 B TRP 160 H THR 207 B THR 200 H HIS 212 B HIS 205 H THR 217 B THR 210 H LYS 222 B LYS 215 BINDING SITE FOR RESIDUE STR H 229 Software 10 H ASN 35 B ASN 35 10 1_555 H TRP 50 B TRP 50 10 1_555 H GLY 95 B GLY 99 10 1_555 H ASP 96 B ASP 100 10 1_555 H TYR 97 B TYR 101 10 1_555 H TRP 100 B TRP 104 10 1_555 L HIS 27 A HIS 31 D 10 1_555 L SER 91 A SER 96 10 1_555 L HIS 93 A HIS 98 10 1_555 L VAL 94 A VAL 99 10 1_555 181 P 64 2 2