1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Katoh, E. Hatta, T. Shindo, H. Mizuno, T. Yamazaki, T. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.0 90.0 90.0 1.00 1.00 1.00 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking UK J.Mol.Biol. JMOBAK 0070 0022-2836 304 219 229 10.1006/jmbi.2000.4170 11080457 High precision NMR structure of YhhP, a novel Escherichia coli protein implicated in cell division. 2000 US J.Bacteriol. JOBAAY 0767 0021-9193 180 2257 2261 The yhhP Gene Encoding a Small Ubiquitous Protein is Fundamental for Normal Cell Growth of Escherichia Coli 1998 To be Published 0353 Characterization of the yhhP Gene Whose Deficiency Results in a Non-Divided Filamentous Cell Morphology in Escherichia coli 10.2210/pdb1dcj/pdb pdb_00001dcj 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 9105.547 YHHP PROTEIN 1 man polymer no no MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKG G MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIADDPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKG G A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Escherichia Escherichia sample 562 Escherichia coli 562 Escherichia coli PET21 database_2 pdbx_nmr_software pdbx_struct_assembly pdbx_struct_oper_list repository Initial release Version format compliance Version format compliance Data collection Database references Derived calculations 1 0 2001-07-18 1 1 2008-04-27 1 2 2011-07-13 1 3 2022-02-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_nmr_software.name RCSB Y RCSB 1999-11-05 REL REL THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY. structures with the lowest energy 100 20 3D_15N-SEPARATED_NOESY HNHA HNHB 4D_13C-SEPARATED_NOESY 100mM NACL 7.1 AMBIENT 298 K 100mM NACL 7.1 AMBIENT 298 K 100mM NACL 7.1 AMBIENT 298 K THE STRUCTURES ARE BASED ON A TOTAL OF 1655 RESTRAINTS, 1390 ARE NOE-DERIVED DISTANCE CONSTRAINTS, 211 DIHEDRAL ANGLE RESTRAINTS, 54 DISTANCE RESTRAINTS FROM HYDROGEN BONDS. HYBRID DISTANCE GEOMETRY-SIMULATED ANNEALING 1 lowest energy 1MM YHHP U-15N; 10MM PHOSPHATE BUFFER K; 100MM NACL; 2MM NAN3; 2MM DTT; 90% H20, 10% D2O 1MM YHHP U-15N, 13C; 10MM PHOSPHATE BUFFER K; 100MM NACL; 2MM NAN3; 2MM DTT; 90% H20, 10% D2O 1MM YHHP U-15N, 13C; 10MM PHOSPHATE BUFFER K; 100MM NACL; 2MM NAN3; 2MM DTT; 100% D2O BRUKER collection XwinNMR DELAGLIO processing NMRPipe GARRETT data analysis CAPP/PIPP/STAPP BRUNGER structure solution X-PLOR 3.1 BRUNGER refinement X-PLOR 3.1 750 Bruker DMX MET 1 n 1 MET 1 A THR 2 n 2 THR 2 A ASP 3 n 3 ASP 3 A LEU 4 n 4 LEU 4 A PHE 5 n 5 PHE 5 A SER 6 n 6 SER 6 A SER 7 n 7 SER 7 A PRO 8 n 8 PRO 8 A ASP 9 n 9 ASP 9 A HIS 10 n 10 HIS 10 A THR 11 n 11 THR 11 A LEU 12 n 12 LEU 12 A ASP 13 n 13 ASP 13 A ALA 14 n 14 ALA 14 A LEU 15 n 15 LEU 15 A GLY 16 n 16 GLY 16 A LEU 17 n 17 LEU 17 A ARG 18 n 18 ARG 18 A CYS 19 n 19 CYS 19 A PRO 20 n 20 PRO 20 A GLU 21 n 21 GLU 21 A PRO 22 n 22 PRO 22 A VAL 23 n 23 VAL 23 A MET 24 n 24 MET 24 A MET 25 n 25 MET 25 A VAL 26 n 26 VAL 26 A ARG 27 n 27 ARG 27 A LYS 28 n 28 LYS 28 A THR 29 n 29 THR 29 A VAL 30 n 30 VAL 30 A ARG 31 n 31 ARG 31 A ASN 32 n 32 ASN 32 A MET 33 n 33 MET 33 A GLN 34 n 34 GLN 34 A PRO 35 n 35 PRO 35 A GLY 36 n 36 GLY 36 A GLU 37 n 37 GLU 37 A THR 38 n 38 THR 38 A LEU 39 n 39 LEU 39 A LEU 40 n 40 LEU 40 A ILE 41 n 41 ILE 41 A ILE 42 n 42 ILE 42 A ALA 43 n 43 ALA 43 A ASP 44 n 44 ASP 44 A ASP 45 n 45 ASP 45 A PRO 46 n 46 PRO 46 A ALA 47 n 47 ALA 47 A THR 48 n 48 THR 48 A THR 49 n 49 THR 49 A ARG 50 n 50 ARG 50 A ASP 51 n 51 ASP 51 A ILE 52 n 52 ILE 52 A PRO 53 n 53 PRO 53 A GLY 54 n 54 GLY 54 A PHE 55 n 55 PHE 55 A CYS 56 n 56 CYS 56 A THR 57 n 57 THR 57 A PHE 58 n 58 PHE 58 A MET 59 n 59 MET 59 A GLU 60 n 60 GLU 60 A HIS 61 n 61 HIS 61 A GLU 62 n 62 GLU 62 A LEU 63 n 63 LEU 63 A VAL 64 n 64 VAL 64 A ALA 65 n 65 ALA 65 A LYS 66 n 66 LYS 66 A GLU 67 n 67 GLU 67 A THR 68 n 68 THR 68 A ASP 69 n 69 ASP 69 A GLY 70 n 70 GLY 70 A LEU 71 n 71 LEU 71 A PRO 72 n 72 PRO 72 A TYR 73 n 73 TYR 73 A ARG 74 n 74 ARG 74 A TYR 75 n 75 TYR 75 A LEU 76 n 76 LEU 76 A ILE 77 n 77 ILE 77 A ARG 78 n 78 ARG 78 A LYS 79 n 79 LYS 79 A GLY 80 n 80 GLY 80 A GLY 81 n 81 GLY 81 A author_defined_assembly 1 monomeric 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O HIS 10 A O HIS 10 A N LEU 40 A N LEU 40 A O ALA 43 A O ALA 43 A N TYR 73 A N TYR 73 A O ARG 78 A O ARG 78 A N GLU 62 A N GLU 62 1 A ARG 18 0.212 SIDE CHAIN 1 A ARG 27 0.286 SIDE CHAIN 1 A ARG 50 0.312 SIDE CHAIN 1 A ARG 74 0.251 SIDE CHAIN 2 A ARG 18 0.288 SIDE CHAIN 2 A ARG 27 0.307 SIDE CHAIN 2 A ARG 31 0.130 SIDE CHAIN 2 A ARG 74 0.202 SIDE CHAIN 2 A ARG 78 0.306 SIDE CHAIN 3 A ARG 18 0.295 SIDE CHAIN 3 A ARG 27 0.317 SIDE CHAIN 3 A ARG 31 0.180 SIDE CHAIN 3 A ARG 50 0.315 SIDE CHAIN 3 A ARG 74 0.191 SIDE CHAIN 3 A ARG 78 0.218 SIDE CHAIN 4 A ARG 18 0.317 SIDE CHAIN 4 A ARG 27 0.257 SIDE CHAIN 4 A ARG 31 0.228 SIDE CHAIN 4 A ARG 50 0.317 SIDE CHAIN 4 A ARG 74 0.280 SIDE CHAIN 4 A ARG 78 0.286 SIDE CHAIN 5 A ARG 18 0.281 SIDE CHAIN 5 A ARG 27 0.081 SIDE CHAIN 5 A ARG 31 0.263 SIDE CHAIN 5 A ARG 50 0.317 SIDE CHAIN 5 A ARG 74 0.134 SIDE CHAIN 5 A ARG 78 0.270 SIDE CHAIN 6 A ARG 18 0.283 SIDE CHAIN 6 A ARG 27 0.204 SIDE CHAIN 6 A ARG 31 0.317 SIDE CHAIN 6 A ARG 74 0.318 SIDE CHAIN 6 A ARG 78 0.090 SIDE CHAIN 7 A ARG 18 0.202 SIDE CHAIN 7 A ARG 27 0.264 SIDE CHAIN 7 A ARG 31 0.105 SIDE CHAIN 7 A ARG 50 0.127 SIDE CHAIN 7 A ARG 74 0.084 SIDE CHAIN 7 A ARG 78 0.085 SIDE CHAIN 8 A ARG 18 0.305 SIDE CHAIN 8 A ARG 27 0.203 SIDE CHAIN 8 A ARG 31 0.295 SIDE CHAIN 8 A ARG 50 0.204 SIDE CHAIN 8 A ARG 74 0.172 SIDE CHAIN 8 A ARG 78 0.131 SIDE CHAIN 9 A ARG 18 0.300 SIDE CHAIN 9 A ARG 27 0.284 SIDE CHAIN 9 A ARG 31 0.303 SIDE CHAIN 9 A ARG 50 0.313 SIDE CHAIN 9 A ARG 74 0.163 SIDE CHAIN 9 A ARG 78 0.317 SIDE CHAIN 10 A ARG 18 0.317 SIDE CHAIN 10 A ARG 27 0.299 SIDE CHAIN 10 A ARG 31 0.302 SIDE CHAIN 10 A ARG 50 0.179 SIDE CHAIN 10 A ARG 74 0.085 SIDE CHAIN 10 A ARG 78 0.276 SIDE CHAIN 11 A ARG 18 0.288 SIDE CHAIN 11 A ARG 27 0.314 SIDE CHAIN 11 A ARG 31 0.317 SIDE CHAIN 11 A ARG 50 0.312 SIDE CHAIN 11 A ARG 74 0.182 SIDE CHAIN 11 A ARG 78 0.316 SIDE CHAIN 12 A ARG 18 0.218 SIDE CHAIN 12 A ARG 27 0.150 SIDE CHAIN 12 A ARG 31 0.213 SIDE CHAIN 12 A ARG 50 0.294 SIDE CHAIN 12 A ARG 74 0.256 SIDE CHAIN 12 A ARG 78 0.245 SIDE CHAIN 13 A ARG 18 0.318 SIDE CHAIN 13 A ARG 27 0.317 SIDE CHAIN 13 A ARG 31 0.155 SIDE CHAIN 13 A ARG 50 0.292 SIDE CHAIN 13 A ARG 74 0.303 SIDE CHAIN 13 A ARG 78 0.218 SIDE CHAIN 14 A ARG 18 0.304 SIDE CHAIN 14 A ARG 27 0.259 SIDE CHAIN 14 A ARG 31 0.281 SIDE CHAIN 14 A ARG 50 0.301 SIDE CHAIN 14 A ARG 74 0.215 SIDE CHAIN 14 A ARG 78 0.311 SIDE CHAIN 15 A ARG 18 0.294 SIDE CHAIN 15 A ARG 27 0.269 SIDE CHAIN 15 A ARG 31 0.309 SIDE CHAIN 15 A ARG 50 0.180 SIDE CHAIN 15 A ARG 74 0.316 SIDE CHAIN 15 A ARG 78 0.317 SIDE CHAIN 16 A ARG 18 0.215 SIDE CHAIN 16 A ARG 27 0.292 SIDE CHAIN 16 A ARG 31 0.180 SIDE CHAIN 16 A ARG 50 0.310 SIDE CHAIN 16 A ARG 74 0.299 SIDE CHAIN 16 A ARG 78 0.243 SIDE CHAIN 17 A ARG 18 0.313 SIDE CHAIN 17 A ARG 27 0.256 SIDE CHAIN 17 A ARG 31 0.208 SIDE CHAIN 17 A ARG 50 0.318 SIDE CHAIN 17 A ARG 74 0.318 SIDE CHAIN 17 A ARG 78 0.243 SIDE CHAIN 18 A ARG 18 0.197 SIDE CHAIN 18 A ARG 27 0.317 SIDE CHAIN 18 A ARG 31 0.276 SIDE CHAIN 18 A ARG 50 0.208 SIDE CHAIN 18 A ARG 74 0.304 SIDE CHAIN 18 A ARG 78 0.317 SIDE CHAIN 19 A ARG 18 0.258 SIDE CHAIN 19 A ARG 27 0.265 SIDE CHAIN 19 A ARG 31 0.287 SIDE CHAIN 19 A ARG 50 0.300 SIDE CHAIN 19 A ARG 74 0.265 SIDE CHAIN 19 A ARG 78 0.184 SIDE CHAIN 20 A ARG 18 0.310 SIDE CHAIN 20 A ARG 27 0.313 SIDE CHAIN 20 A ARG 31 0.193 SIDE CHAIN 20 A ARG 50 0.271 SIDE CHAIN 20 A ARG 74 0.125 SIDE CHAIN 20 A ARG 78 0.306 SIDE CHAIN 1 A SER 6 -45.83 174.89 1 A SER 7 -46.92 104.19 1 A ALA 14 -141.77 17.51 1 A GLU 60 83.16 25.84 1 A LEU 71 -35.15 146.94 2 A SER 6 -46.21 174.80 2 A SER 7 -47.25 104.54 2 A ALA 14 -140.58 17.72 2 A GLU 60 81.37 25.21 2 A LEU 71 -34.80 146.43 3 A SER 6 -46.51 174.71 3 A SER 7 -47.28 104.34 3 A ALA 14 -144.94 19.76 3 A GLU 60 84.23 23.79 3 A LEU 71 -35.43 146.58 4 A SER 6 -47.76 175.09 4 A SER 7 -47.08 104.10 4 A GLU 60 83.84 26.55 4 A LEU 71 -35.82 146.08 5 A SER 6 -45.80 174.94 5 A SER 7 -47.06 104.26 5 A ALA 14 -143.70 20.23 5 A GLU 60 82.24 26.18 5 A LEU 71 -35.45 146.46 6 A SER 6 -44.03 175.05 6 A SER 7 -46.37 104.30 6 A GLU 60 84.84 23.54 6 A LEU 71 -35.26 145.92 7 A SER 6 -44.90 174.76 7 A SER 7 -46.71 104.08 7 A ALA 14 -140.35 18.72 7 A LEU 71 -36.59 148.08 8 A SER 6 -46.55 175.12 8 A SER 7 -46.91 103.79 8 A ALA 14 -144.79 19.67 8 A GLU 60 82.95 29.33 8 A LEU 71 -34.23 146.44 8 A LYS 79 -59.67 106.34 9 A SER 6 -45.73 174.69 9 A SER 7 -46.93 103.84 9 A ALA 14 -143.97 18.41 9 A GLU 60 81.29 28.09 9 A LEU 71 -34.57 147.02 10 A SER 6 -46.08 174.98 10 A SER 7 -46.53 104.30 10 A ALA 14 -142.44 18.91 10 A GLU 60 83.19 22.79 10 A LEU 71 -36.76 147.08 11 A SER 6 -44.87 174.97 11 A SER 7 -46.69 104.24 11 A ALA 14 -143.76 20.34 11 A GLU 60 88.57 22.18 11 A LEU 71 -35.29 146.94 12 A SER 6 -46.61 174.72 12 A SER 7 -47.47 104.36 12 A ALA 14 -141.91 17.34 12 A LEU 71 -35.53 145.99 13 A SER 6 -45.63 174.74 13 A SER 7 -46.92 103.51 13 A ALA 14 -145.62 19.53 13 A GLU 60 83.94 26.09 13 A LEU 71 -36.82 147.79 14 A SER 6 -45.11 174.92 14 A SER 7 -47.14 103.69 14 A ALA 14 -143.14 21.27 14 A GLU 60 85.49 22.68 14 A LEU 71 -36.17 147.25 15 A SER 6 -47.12 175.54 15 A SER 7 -46.76 103.84 15 A GLU 60 81.86 25.18 15 A LEU 71 -35.86 147.04 16 A SER 6 -46.19 174.60 16 A SER 7 -47.49 104.32 16 A GLU 60 83.42 27.11 16 A LEU 71 -36.40 146.79 17 A THR 2 -53.00 109.44 17 A SER 6 -44.03 174.82 17 A SER 7 -46.24 103.27 17 A ALA 14 -144.28 20.89 17 A GLU 60 85.33 25.15 17 A LEU 71 -35.64 147.25 18 A SER 6 -46.51 174.64 18 A SER 7 -47.13 104.25 18 A ALA 14 -144.79 20.08 18 A GLU 60 81.00 22.33 18 A LEU 71 -35.21 146.10 19 A SER 6 -45.64 174.77 19 A SER 7 -46.74 104.68 19 A GLU 60 81.87 23.71 19 A LEU 71 -35.95 147.29 20 A SER 6 -46.49 174.76 20 A SER 7 -46.89 104.22 20 A ALA 14 -144.54 19.09 20 A LEU 71 -33.73 145.92 SOLUTION STRUCTURE OF YHHP, A NOVEL ESCHERICHIA COLI PROTEIN IMPLICATED IN THE CELL DIVISION 1 N N A PRO 20 A PRO 20 HELX_P A MET 33 A MET 33 1 1 14 A ALA 47 A ALA 47 HELX_P A MET 59 A MET 59 1 2 13 STRUCTURAL GENOMICS, UNKNOWN FUNCTION ALPHA-BETA SANDWICH, STRUCTURAL GENOMICS, UNKNOWN FUNCTION A CYS 19 A CYS 19 1 A PRO 20 A PRO 20 -0.50 A LEU 71 A LEU 71 1 A PRO 72 A PRO 72 -0.83 A CYS 19 A CYS 19 2 A PRO 20 A PRO 20 -0.43 A LEU 71 A LEU 71 2 A PRO 72 A PRO 72 -0.92 A CYS 19 A CYS 19 3 A PRO 20 A PRO 20 -0.52 A LEU 71 A LEU 71 3 A PRO 72 A PRO 72 -0.83 A CYS 19 A CYS 19 4 A PRO 20 A PRO 20 -0.46 A LEU 71 A LEU 71 4 A PRO 72 A PRO 72 -0.98 A CYS 19 A CYS 19 5 A PRO 20 A PRO 20 -0.44 A LEU 71 A LEU 71 5 A PRO 72 A PRO 72 -0.94 A CYS 19 A CYS 19 6 A PRO 20 A PRO 20 -0.38 A LEU 71 A LEU 71 6 A PRO 72 A PRO 72 -0.92 A CYS 19 A CYS 19 7 A PRO 20 A PRO 20 -0.39 A LEU 71 A LEU 71 7 A PRO 72 A PRO 72 -0.92 A CYS 19 A CYS 19 8 A PRO 20 A PRO 20 -0.43 A LEU 71 A LEU 71 8 A PRO 72 A PRO 72 -0.96 A CYS 19 A CYS 19 9 A PRO 20 A PRO 20 -0.48 A LEU 71 A LEU 71 9 A PRO 72 A PRO 72 -0.87 A CYS 19 A CYS 19 10 A PRO 20 A PRO 20 -0.63 A LEU 71 A LEU 71 10 A PRO 72 A PRO 72 -0.86 A CYS 19 A CYS 19 11 A PRO 20 A PRO 20 -0.44 A LEU 71 A LEU 71 11 A PRO 72 A PRO 72 -1.05 A CYS 19 A CYS 19 12 A PRO 20 A PRO 20 -0.54 A LEU 71 A LEU 71 12 A PRO 72 A PRO 72 -0.79 A CYS 19 A CYS 19 13 A PRO 20 A PRO 20 -0.28 A LEU 71 A LEU 71 13 A PRO 72 A PRO 72 -1.11 A CYS 19 A CYS 19 14 A PRO 20 A PRO 20 -0.32 A LEU 71 A LEU 71 14 A PRO 72 A PRO 72 -0.89 A CYS 19 A CYS 19 15 A PRO 20 A PRO 20 -0.58 A LEU 71 A LEU 71 15 A PRO 72 A PRO 72 -0.80 A CYS 19 A CYS 19 16 A PRO 20 A PRO 20 -0.54 A LEU 71 A LEU 71 16 A PRO 72 A PRO 72 -0.72 A CYS 19 A CYS 19 17 A PRO 20 A PRO 20 -0.41 A LEU 71 A LEU 71 17 A PRO 72 A PRO 72 -0.93 A CYS 19 A CYS 19 18 A PRO 20 A PRO 20 -0.55 A LEU 71 A LEU 71 18 A PRO 72 A PRO 72 -1.02 A CYS 19 A CYS 19 19 A PRO 20 A PRO 20 -0.57 A LEU 71 A LEU 71 19 A PRO 72 A PRO 72 -0.79 A CYS 19 A CYS 19 20 A PRO 20 A PRO 20 -0.53 A LEU 71 A LEU 71 20 A PRO 72 A PRO 72 -0.90 SIRA_ECOLI UNP 1 P0A890 1 81 1DCJ 1 81 P0A890 A 1 1 81 4 parallel anti-parallel anti-parallel A HIS 10 A HIS 10 A LEU 12 A LEU 12 A LEU 39 A LEU 39 A ALA 43 A ALA 43 A TYR 73 A TYR 73 A ARG 78 A ARG 78 A GLU 62 A GLU 62 A GLU 67 A GLU 67 1 P 1