32.51
13.614
-12.555
26.764
A
O5'
DC
1
ATOM
A
O5'
DC
1
1
1.00
1
O
34.42
14.436
-12.194
27.890
A
C5'
DC
1
ATOM
A
C5'
DC
1
1
1.00
1
C
33.20
15.383
-11.082
27.553
A
C4'
DC
1
ATOM
A
C4'
DC
1
1
1.00
1
C
34.19
16.534
-11.579
26.836
A
O4'
DC
1
ATOM
A
O4'
DC
1
1
1.00
1
O
29.30
14.846
-9.964
26.663
A
C3'
DC
1
ATOM
A
C3'
DC
1
1
1.00
1
C
29.57
14.181
-8.970
27.491
A
O3'
DC
1
ATOM
A
O3'
DC
1
1
1.00
1
O
27.87
16.116
-9.380
26.075
A
C2'
DC
1
ATOM
A
C2'
DC
1
1
1.00
1
C
24.09
17.122
-10.523
26.063
A
C1'
DC
1
ATOM
A
C1'
DC
1
1
1.00
1
C
28.19
17.273
-11.111
24.711
A
N1
DC
1
ATOM
A
N1
DC
1
1
1.00
1
N
29.31
18.450
-11.839
24.471
A
C2
DC
1
ATOM
A
C2
DC
1
1
1.00
1
C
28.32
19.181
-12.010
25.455
A
O2
DC
1
ATOM
A
O2
DC
1
1
1.00
1
O
30.98
18.718
-12.229
23.211
A
N3
DC
1
ATOM
A
N3
DC
1
1
1.00
1
N
31.33
17.832
-12.058
22.228
A
C4
DC
1
ATOM
A
C4
DC
1
1
1.00
1
C
21.72
18.116
-12.479
20.995
A
N4
DC
1
ATOM
A
N4
DC
1
1
1.00
1
N
32.43
16.586
-11.402
22.467
A
C5
DC
1
ATOM
A
C5
DC
1
1
1.00
1
C
29.57
16.443
-10.841
23.676
A
C6
DC
1
ATOM
A
C6
DC
1
1
1.00
1
C
39.37
12.641
-8.632
27.126
A
P
DC
2
ATOM
A
P
DC
1
2
1.00
1
P
35.04
12.005
-7.790
28.173
A
OP1
DC
2
ATOM
A
OP1
DC
1
2
1.00
1
O
57.47
12.004
-9.900
26.700
A
OP2
DC
2
ATOM
A
OP2
DC
1
2
1.00
1
O
34.31
12.767
-7.728
25.819
A
O5'
DC
2
ATOM
A
O5'
DC
1
2
1.00
1
O
40.74
12.780
-8.317
24.505
A
C5'
DC
2
ATOM
A
C5'
DC
1
2
1.00
1
C
29.50
11.957
-7.409
23.612
A
C4'
DC
2
ATOM
A
C4'
DC
1
2
1.00
1
C
28.00
10.612
-7.328
24.144
A
O4'
DC
2
ATOM
A
O4'
DC
1
2
1.00
1
O
24.50
12.480
-5.958
23.628
A
C3'
DC
2
ATOM
A
C3'
DC
1
2
1.00
1
C
26.05
12.255
-5.536
22.278
A
O3'
DC
2
ATOM
A
O3'
DC
1
2
1.00
1
O
31.06
11.497
-5.211
24.535
A
C2'
DC
2
ATOM
A
C2'
DC
1
2
1.00
1
C
34.01
10.207
-5.964
24.258
A
C1'
DC
2
ATOM
A
C1'
DC
1
2
1.00
1
C
25.16
9.162
-5.902
25.291
A
N1
DC
2
ATOM
A
N1
DC
1
2
1.00
1
N
28.53
7.873
-5.529
24.896
A
C2
DC
2
ATOM
A
C2
DC
1
2
1.00
1
C
32.40
7.631
-5.301
23.699
A
O2
DC
2
ATOM
A
O2
DC
1
2
1.00
1
O
18.92
6.914
-5.422
25.830
A
N3
DC
2
ATOM
A
N3
DC
1
2
1.00
1
N
27.36
7.166
-5.612
27.124
A
C4
DC
2
ATOM
A
C4
DC
1
2
1.00
1
C
27.70
6.130
-5.572
27.962
A
N4
DC
2
ATOM
A
N4
DC
1
2
1.00
1
N
22.47
8.467
-6.026
27.551
A
C5
DC
2
ATOM
A
C5
DC
1
2
1.00
1
C
26.00
9.420
-6.109
26.615
A
C6
DC
2
ATOM
A
C6
DC
1
2
1.00
1
C
29.61
12.961
-4.271
21.650
A
P
DG
3
ATOM
A
P
DG
1
3
1.00
1
P
30.79
12.991
-4.408
20.155
A
OP1
DG
3
ATOM
A
OP1
DG
1
3
1.00
1
O
36.86
14.227
-3.926
22.343
A
OP2
DG
3
ATOM
A
OP2
DG
1
3
1.00
1
O
36.11
11.969
-3.036
21.946
A
O5'
DG
3
ATOM
A
O5'
DG
1
3
1.00
1
O
30.70
10.643
-3.020
21.383
A
C5'
DG
3
ATOM
A
C5'
DG
1
3
1.00
1
C
26.84
9.880
-1.827
21.971
A
C4'
DG
3
ATOM
A
C4'
DG
1
3
1.00
1
C
23.11
9.693
-2.114
23.369
A
O4'
DG
3
ATOM
A
O4'
DG
1
3
1.00
1
O
28.88
10.672
-0.508
21.944
A
C3'
DG
3
ATOM
A
C3'
DG
1
3
1.00
1
C
25.13
9.766
0.570
21.588
A
O3'
DG
3
ATOM
A
O3'
DG
1
3
1.00
1
O
32.62
11.081
-0.281
23.381
A
C2'
DG
3
ATOM
A
C2'
DG
1
3
1.00
1
C
24.73
10.032
-1.004
24.179
A
C1'
DG
3
ATOM
A
C1'
DG
1
3
1.00
1
C
20.75
10.407
-1.528
25.489
A
N9
DG
3
ATOM
A
N9
DG
1
3
1.00
1
N
23.49
11.660
-1.899
25.930
A
C8
DG
3
ATOM
A
C8
DG
1
3
1.00
1
C
25.29
11.635
-2.414
27.136
A
N7
DG
3
ATOM
A
N7
DG
1
3
1.00
1
N
20.05
10.316
-2.325
27.537
A
C5
DG
3
ATOM
A
C5
DG
1
3
1.00
1
C
21.26
9.652
-2.696
28.729
A
C6
DG
3
ATOM
A
C6
DG
1
3
1.00
1
C
30.45
10.139
-3.224
29.744
A
O6
DG
3
ATOM
A
O6
DG
1
3
1.00
1
O
22.64
8.256
-2.534
28.662
A
N1
DG
3
ATOM
A
N1
DG
1
3
1.00
1
N
30.32
7.592
-2.030
27.582
A
C2
DG
3
ATOM
A
C2
DG
1
3
1.00
1
C
26.91
6.268
-1.892
27.661
A
N2
DG
3
ATOM
A
N2
DG
1
3
1.00
1
N
20.58
8.222
-1.624
26.494
A
N3
DG
3
ATOM
A
N3
DG
1
3
1.00
1
N
21.73
9.523
-1.953
26.457
A
C4
DG
3
ATOM
A
C4
DG
1
3
1.00
1
C
30.61
10.286
1.772
20.651
A
P
DA
4
ATOM
A
P
DA
1
4
1.00
1
P
31.85
11.152
1.252
19.572
A
OP1
DA
4
ATOM
A
OP1
DA
1
4
1.00
1
O
30.54
10.707
2.906
21.496
A
OP2
DA
4
ATOM
A
OP2
DA
1
4
1.00
1
O
32.70
8.885
2.230
19.994
A
O5'
DA
4
ATOM
A
O5'
DA
1
4
1.00
1
O
27.95
8.093
1.328
19.209
A
C5'
DA
4
ATOM
A
C5'
DA
1
4
1.00
1
C
28.76
6.625
1.634
19.306
A
C4'
DA
4
ATOM
A
C4'
DA
1
4
1.00
1
C
25.30
6.030
1.162
20.535
A
O4'
DA
4
ATOM
A
O4'
DA
1
4
1.00
1
O
33.89
6.261
3.107
19.163
A
C3'
DA
4
ATOM
A
C3'
DA
1
4
1.00
1
C
41.60
5.298
3.174
18.108
A
O3'
DA
4
ATOM
A
O3'
DA
1
4
1.00
1
O
26.17
5.616
3.498
20.479
A
C2'
DA
4
ATOM
A
C2'
DA
1
4
1.00
1
C
23.24
5.318
2.201
21.194
A
C1'
DA
4
ATOM
A
C1'
DA
1
4
1.00
1
C
22.87
5.779
2.218
22.607
A
N9
DA
4
ATOM
A
N9
DA
1
4
1.00
1
N
23.03
6.941
1.743
23.123
A
C8
DA
4
ATOM
A
C8
DA
1
4
1.00
1
C
22.42
7.074
1.949
24.429
A
N7
DA
4
ATOM
A
N7
DA
1
4
1.00
1
N
30.74
5.905
2.619
24.751
A
C5
DA
4
ATOM
A
C5
DA
1
4
1.00
1
C
29.94
5.431
3.210
25.937
A
C6
DA
4
ATOM
A
C6
DA
1
4
1.00
1
C
31.88
6.046
3.062
27.104
A
N6
DA
4
ATOM
A
N6
DA
1
4
1.00
1
N
28.21
4.189
3.747
25.912
A
N1
DA
4
ATOM
A
N1
DA
1
4
1.00
1
N
28.07
3.493
3.799
24.764
A
C2
DA
4
ATOM
A
C2
DA
1
4
1.00
1
C
28.17
3.861
3.330
23.587
A
N3
DA
4
ATOM
A
N3
DA
1
4
1.00
1
N
27.00
5.088
2.773
23.647
A
C4
DA
4
ATOM
A
C4
DA
1
4
1.00
1
C
38.77
5.024
4.512
17.269
A
P
DA
5
ATOM
A
P
DA
1
5
1.00
1
P
49.74
3.879
4.271
16.364
A
OP1
DA
5
ATOM
A
OP1
DA
1
5
1.00
1
O
35.54
6.351
4.971
16.783
A
OP2
DA
5
ATOM
A
OP2
DA
1
5
1.00
1
O
35.03
4.562
5.579
18.362
A
O5'
DA
5
ATOM
A
O5'
DA
1
5
1.00
1
O
37.62
3.316
5.425
19.062
A
C5'
DA
5
ATOM
A
C5'
DA
1
5
1.00
1
C
34.80
3.091
6.525
20.044
A
C4'
DA
5
ATOM
A
C4'
DA
1
5
1.00
1
C
33.45
3.822
6.343
21.262
A
O4'
DA
5
ATOM
A
O4'
DA
1
5
1.00
1
O
30.44
3.283
7.982
19.628
A
C3'
DA
5
ATOM
A
C3'
DA
1
5
1.00
1
C
35.15
2.232
8.740
20.249
A
O3'
DA
5
ATOM
A
O3'
DA
1
5
1.00
1
O
33.65
4.636
8.308
20.232
A
C2'
DA
5
ATOM
A
C2'
DA
1
5
1.00
1
C
25.22
4.732
7.422
21.456
A
C1'
DA
5
ATOM
A
C1'
DA
1
5
1.00
1
C
24.61
6.051
6.879
21.769
A
N9
DA
5
ATOM
A
N9
DA
1
5
1.00
1
N
24.57
6.992
6.451
20.877
A
C8
DA
5
ATOM
A
C8
DA
1
5
1.00
1
C
22.30
8.092
5.959
21.404
A
N7
DA
5
ATOM
A
N7
DA
1
5
1.00
1
N
22.80
7.764
5.871
22.765
A
C5
DA
5
ATOM
A
C5
DA
1
5
1.00
1
C
33.40
8.555
5.575
23.892
A
C6
DA
5
ATOM
A
C6
DA
1
5
1.00
1
C
24.92
9.784
5.038
23.834
A
N6
DA
5
ATOM
A
N6
DA
1
5
1.00
1
N
29.15
8.049
5.801
25.126
A
N1
DA
5
ATOM
A
N1
DA
1
5
1.00
1
N
30.25
6.836
6.356
25.193
A
C2
DA
5
ATOM
A
C2
DA
1
5
1.00
1
C
31.29
6.038
6.754
24.216
A
N3
DA
5
ATOM
A
N3
DA
1
5
1.00
1
N
24.39
6.548
6.478
22.996
A
C4
DA
5
ATOM
A
C4
DA
1
5
1.00
1
C
28.64
6.602
10.338
23.970
A
N1
BRU
6
HETATM
A
N1
BRU
1
6
1.00
1
N
35.42
7.452
9.899
24.957
A
C2
BRU
6
HETATM
A
C2
BRU
1
6
1.00
1
C
24.35
8.682
9.429
24.544
A
N3
BRU
6
HETATM
A
N3
BRU
1
6
1.00
1
N
18.54
9.118
9.247
23.246
A
C4
BRU
6
HETATM
A
C4
BRU
1
6
1.00
1
C
19.09
8.187
9.732
22.245
A
C5
BRU
6
HETATM
A
C5
BRU
1
6
1.00
1
C
22.75
7.000
10.254
22.661
A
C6
BRU
6
HETATM
A
C6
BRU
1
6
1.00
1
C
25.26
7.173
9.959
26.139
A
O2
BRU
6
HETATM
A
O2
BRU
1
6
1.00
1
O
29.96
10.205
8.783
22.963
A
O4
BRU
6
HETATM
A
O4
BRU
1
6
1.00
1
O
33.96
8.525
9.586
20.399
A
BR
BRU
6
HETATM
A
BR
BRU
1
6
1.00
1
BR
35.60
5.285
10.874
24.341
A
C1'
BRU
6
HETATM
A
C1'
BRU
1
6
1.00
1
C
34.62
4.899
12.273
23.883
A
C2'
BRU
6
HETATM
A
C2'
BRU
1
6
1.00
1
C
31.33
3.377
12.250
23.875
A
C3'
BRU
6
HETATM
A
C3'
BRU
1
6
1.00
1
C
35.18
3.032
10.743
23.895
A
C4'
BRU
6
HETATM
A
C4'
BRU
1
6
1.00
1
C
28.61
2.842
12.800
25.070
A
O3'
BRU
6
HETATM
A
O3'
BRU
1
6
1.00
1
O
28.09
4.302
10.081
23.650
A
O4'
BRU
6
HETATM
A
O4'
BRU
1
6
1.00
1
O
35.69
2.099
10.338
22.781
A
C5'
BRU
6
HETATM
A
C5'
BRU
1
6
1.00
1
C
36.33
2.659
10.850
21.552
A
O5'
BRU
6
HETATM
A
O5'
BRU
1
6
1.00
1
O
42.27
2.085
10.340
20.162
A
P
BRU
6
HETATM
A
P
BRU
1
6
1.00
1
P
70.69
0.634
10.688
20.142
A
OP1
BRU
6
HETATM
A
OP1
BRU
1
6
1.00
1
O
30.13
2.964
10.850
19.092
A
OP2
BRU
6
HETATM
A
OP2
BRU
1
6
1.00
1
O
32.65
2.858
14.271
25.635
A
P
DG
7
ATOM
A
P
DG
1
7
1.00
1
P
43.82
1.945
14.483
26.751
A
OP1
DG
7
ATOM
A
OP1
DG
1
7
1.00
1
O
27.49
2.867
15.196
24.434
A
OP2
DG
7
ATOM
A
OP2
DG
1
7
1.00
1
O
30.53
4.368
14.523
26.152
A
O5'
DG
7
ATOM
A
O5'
DG
1
7
1.00
1
O
30.14
4.938
13.738
27.207
A
C5'
DG
7
ATOM
A
C5'
DG
1
7
1.00
1
C
21.60
6.385
14.127
27.382
A
C4'
DG
7
ATOM
A
C4'
DG
1
7
1.00
1
C
24.45
7.133
13.754
26.193
A
O4'
DG
7
ATOM
A
O4'
DG
1
7
1.00
1
O
22.29
6.602
15.615
27.595
A
C3'
DG
7
ATOM
A
C3'
DG
1
7
1.00
1
C
31.82
7.589
15.799
28.630
A
O3'
DG
7
ATOM
A
O3'
DG
1
7
1.00
1
O
22.95
7.207
16.118
26.292
A
C2'
DG
7
ATOM
A
C2'
DG
1
7
1.00
1
C
27.98
7.895
14.875
25.761
A
C1'
DG
7
ATOM
A
C1'
DG
1
7
1.00
1
C
22.50
7.892
14.750
24.298
A
N9
DG
7
ATOM
A
N9
DG
1
7
1.00
1
N
24.28
7.042
15.259
23.357
A
C8
DG
7
ATOM
A
C8
DG
1
7
1.00
1
C
26.96
7.307
14.818
22.150
A
N7
DG
7
ATOM
A
N7
DG
1
7
1.00
1
N
27.62
8.385
13.964
22.342
A
C5
DG
7
ATOM
A
C5
DG
1
7
1.00
1
C
31.36
9.112
13.197
21.398
A
C6
DG
7
ATOM
A
C6
DG
1
7
1.00
1
C
30.27
8.966
13.237
20.177
A
O6
DG
7
ATOM
A
O6
DG
1
7
1.00
1
O
30.60
10.154
12.492
21.998
A
N1
DG
7
ATOM
A
N1
DG
1
7
1.00
1
N
20.76
10.440
12.491
23.352
A
C2
DG
7
ATOM
A
C2
DG
1
7
1.00
1
C
27.86
11.461
11.721
23.716
A
N2
DG
7
ATOM
A
N2
DG
1
7
1.00
1
N
20.65
9.744
13.178
24.252
A
N3
DG
7
ATOM
A
N3
DG
1
7
1.00
1
N
26.12
8.791
13.925
23.653
A
C4
DG
7
ATOM
A
C4
DG
1
7
1.00
1
C
36.86
7.126
16.388
30.053
A
P
DA
8
ATOM
A
P
DA
1
8
1.00
1
P
32.66
5.953
15.628
30.516
A
OP1
DA
8
ATOM
A
OP1
DA
1
8
1.00
1
O
46.03
7.024
17.868
29.868
A
OP2
DA
8
ATOM
A
OP2
DA
1
8
1.00
1
O
41.71
8.378
16.151
31.003
A
O5'
DA
8
ATOM
A
O5'
DA
1
8
1.00
1
O
39.97
8.555
14.919
31.724
A
C5'
DA
8
ATOM
A
C5'
DA
1
8
1.00
1
C
34.69
9.907
14.924
32.395
A
C4'
DA
8
ATOM
A
C4'
DA
1
8
1.00
1
C
30.20
10.926
14.535
31.455
A
O4'
DA
8
ATOM
A
O4'
DA
1
8
1.00
1
O
34.84
10.375
16.297
32.905
A
C3'
DA
8
ATOM
A
C3'
DA
1
8
1.00
1
C
41.86
11.295
15.979
33.988
A
O3'
DA
8
ATOM
A
O3'
DA
1
8
1.00
1
O
29.77
11.219
16.834
31.758
A
C2'
DA
8
ATOM
A
C2'
DA
1
8
1.00
1
C
26.18
11.862
15.571
31.223
A
C1'
DA
8
ATOM
A
C1'
DA
1
8
1.00
1
C
27.05
12.181
15.493
29.807
A
N9
DA
8
ATOM
A
N9
DA
1
8
1.00
1
N
28.04
11.318
15.633
28.743
A
C8
DA
8
ATOM
A
C8
DA
1
8
1.00
1
C
30.22
11.926
15.728
27.584
A
N7
DA
8
ATOM
A
N7
DA
1
8
1.00
1
N
32.00
13.277
15.597
27.920
A
C5
DA
8
ATOM
A
C5
DA
1
8
1.00
1
C
30.17
14.429
15.491
27.120
A
C6
DA
8
ATOM
A
C6
DA
1
8
1.00
1
C
22.80
14.410
15.841
25.841
A
N6
DA
8
ATOM
A
N6
DA
1
8
1.00
1
N
30.01
15.631
15.298
27.718
A
N1
DA
8
ATOM
A
N1
DA
1
8
1.00
1
N
26.36
15.595
15.096
29.040
A
C2
DA
8
ATOM
A
C2
DA
1
8
1.00
1
C
24.72
14.586
15.090
29.895
A
N3
DA
8
ATOM
A
N3
DA
1
8
1.00
1
N
25.63
13.424
15.310
29.260
A
C4
DA
8
ATOM
A
C4
DA
1
8
1.00
1
C
37.39
11.552
17.065
35.132
A
P
DG
9
ATOM
A
P
DG
1
9
1.00
1
P
36.35
11.904
16.351
36.377
A
OP1
DG
9
ATOM
A
OP1
DG
1
9
1.00
1
O
31.98
10.504
18.107
35.111
A
OP2
DG
9
ATOM
A
OP2
DG
1
9
1.00
1
O
35.28
12.889
17.771
34.621
A
O5'
DG
9
ATOM
A
O5'
DG
1
9
1.00
1
O
31.46
14.152
17.067
34.593
A
C5'
DG
9
ATOM
A
C5'
DG
1
9
1.00
1
C
27.93
15.066
17.843
33.648
A
C4'
DG
9
ATOM
A
C4'
DG
1
9
1.00
1
C
33.65
14.401
17.891
32.352
A
O4'
DG
9
ATOM
A
O4'
DG
1
9
1.00
1
O
34.16
15.223
19.320
34.060
A
C3'
DG
9
ATOM
A
C3'
DG
1
9
1.00
1
C
40.62
16.510
19.783
33.628
A
O3'
DG
9
ATOM
A
O3'
DG
1
9
1.00
1
O
36.08
14.145
19.994
33.200
A
C2'
DG
9
ATOM
A
C2'
DG
1
9
1.00
1
C
28.37
14.364
19.236
31.892
A
C1'
DG
9
ATOM
A
C1'
DG
1
9
1.00
1
C
27.57
13.388
19.444
30.833
A
N9
DG
9
ATOM
A
N9
DG
1
9
1.00
1
N
27.40
12.136
19.962
30.922
A
C8
DG
9
ATOM
A
C8
DG
1
9
1.00
1
C
27.38
11.496
20.037
29.784
A
N7
DG
9
ATOM
A
N7
DG
1
9
1.00
1
N
30.15
12.458
19.651
28.858
A
C5
DG
9
ATOM
A
C5
DG
1
9
1.00
1
C
21.39
12.412
19.639
27.441
A
C6
DG
9
ATOM
A
C6
DG
1
9
1.00
1
C
29.19
11.434
19.873
26.703
A
O6
DG
9
ATOM
A
O6
DG
1
9
1.00
1
O
22.69
13.628
19.232
26.897
A
N1
DG
9
ATOM
A
N1
DG
1
9
1.00
1
N
22.37
14.755
18.907
27.618
A
C2
DG
9
ATOM
A
C2
DG
1
9
1.00
1
C
27.38
15.838
18.533
26.897
A
N2
DG
9
ATOM
A
N2
DG
1
9
1.00
1
N
26.85
14.822
18.963
28.938
A
N3
DG
9
ATOM
A
N3
DG
1
9
1.00
1
N
19.81
13.611
19.234
29.492
A
C4
DG
9
ATOM
A
C4
DG
1
9
1.00
1
C
39.58
17.396
20.815
34.477
A
P
DG
10
ATOM
A
P
DG
1
10
1.00
1
P
46.44
17.800
20.195
35.745
A
OP1
DG
10
ATOM
A
OP1
DG
1
10
1.00
1
O
34.80
16.701
22.140
34.495
A
OP2
DG
10
ATOM
A
OP2
DG
1
10
1.00
1
O
37.53
18.710
20.969
33.578
A
O5'
DG
10
ATOM
A
O5'
DG
1
10
1.00
1
O
39.03
19.419
19.783
33.152
A
C5'
DG
10
ATOM
A
C5'
DG
1
10
1.00
1
C
35.64
19.994
19.984
31.758
A
C4'
DG
10
ATOM
A
C4'
DG
1
10
1.00
1
C
32.57
18.903
20.060
30.817
A
O4'
DG
10
ATOM
A
O4'
DG
1
10
1.00
1
O
39.39
20.771
21.289
31.573
A
C3'
DG
10
ATOM
A
C3'
DG
1
10
1.00
1
C
48.98
21.950
21.030
30.791
A
O3'
DG
10
ATOM
A
O3'
DG
1
10
1.00
1
O
34.55
19.810
22.184
30.805
A
C2'
DG
10
ATOM
A
C2'
DG
1
10
1.00
1
C
30.32
19.041
21.188
29.945
A
C1'
DG
10
ATOM
A
C1'
DG
1
10
1.00
1
C
33.73
17.689
21.574
29.545
A
N9
DG
10
ATOM
A
N9
DG
1
10
1.00
1
N
28.80
16.668
21.818
30.442
A
C8
DG
10
ATOM
A
C8
DG
1
10
1.00
1
C
31.37
15.578
22.264
29.898
A
N7
DG
10
ATOM
A
N7
DG
1
10
1.00
1
N
26.98
15.808
22.123
28.535
A
C5
DG
10
ATOM
A
C5
DG
1
10
1.00
1
C
25.23
14.999
22.537
27.456
A
C6
DG
10
ATOM
A
C6
DG
1
10
1.00
1
C
27.59
13.793
22.858
27.520
A
O6
DG
10
ATOM
A
O6
DG
1
10
1.00
1
O
24.52
15.654
22.374
26.244
A
N1
DG
10
ATOM
A
N1
DG
1
10
1.00
1
N
31.26
16.953
21.967
26.103
A
C2
DG
10
ATOM
A
C2
DG
1
10
1.00
1
C
33.41
17.424
21.886
24.850
A
N2
DG
10
ATOM
A
N2
DG
1
10
1.00
1
N
28.50
17.734
21.633
27.112
A
N3
DG
10
ATOM
A
N3
DG
1
10
1.00
1
N
30.96
17.137
21.784
28.308
A
C4
DG
10
ATOM
A
C4
DG
1
10
1.00
1
C
28.48
11.245
22.990
18.924
B
O5'
DC
11
ATOM
B
O5'
DC
1
1
1.00
1
O
27.30
12.038
23.355
17.778
B
C5'
DC
11
ATOM
B
C5'
DC
1
1
1.00
1
C
21.05
13.495
23.308
18.192
B
C4'
DC
11
ATOM
B
C4'
DC
1
1
1.00
1
C
22.53
13.674
24.102
19.381
B
O4'
DC
11
ATOM
B
O4'
DC
1
1
1.00
1
O
20.82
13.949
21.905
18.661
B
C3'
DC
11
ATOM
B
C3'
DC
1
1
1.00
1
C
26.60
14.600
21.309
17.516
B
O3'
DC
11
ATOM
B
O3'
DC
1
1
1.00
1
O
25.07
15.040
22.228
19.680
B
C2'
DC
11
ATOM
B
C2'
DC
1
1
1.00
1
C
23.21
14.463
23.451
20.362
B
C1'
DC
11
ATOM
B
C1'
DC
1
1
1.00
1
C
23.38
13.768
23.174
21.620
B
N1
DC
11
ATOM
B
N1
DC
1
1
1.00
1
N
16.29
14.568
22.873
22.736
B
C2
DC
11
ATOM
B
C2
DC
1
1
1.00
1
C
29.06
15.770
22.609
22.573
B
O2
DC
11
ATOM
B
O2
DC
1
1
1.00
1
O
20.56
14.031
22.878
23.973
B
N3
DC
11
ATOM
B
N3
DC
1
1
1.00
1
N
26.38
12.739
23.183
24.148
B
C4
DC
11
ATOM
B
C4
DC
1
1
1.00
1
C
30.86
12.245
23.157
25.393
B
N4
DC
11
ATOM
B
N4
DC
1
1
1.00
1
N
19.52
11.889
23.410
23.030
B
C5
DC
11
ATOM
B
C5
DC
1
1
1.00
1
C
17.18
12.439
23.401
21.812
B
C6
DC
11
ATOM
B
C6
DC
1
1
1.00
1
C
28.09
14.207
19.836
17.038
B
P
DC
12
ATOM
B
P
DC
1
2
1.00
1
P
24.60
14.725
19.705
15.647
B
OP1
DC
12
ATOM
B
OP1
DC
1
2
1.00
1
O
25.33
12.779
19.517
17.290
B
OP2
DC
12
ATOM
B
OP2
DC
1
2
1.00
1
O
23.88
15.042
18.870
18.015
B
O5'
DC
12
ATOM
B
O5'
DC
1
2
1.00
1
O
24.67
16.451
19.162
18.188
B
C5'
DC
12
ATOM
B
C5'
DC
1
2
1.00
1
C
21.67
16.980
18.399
19.393
B
C4'
DC
12
ATOM
B
C4'
DC
1
2
1.00
1
C
22.52
16.314
19.011
20.533
B
O4'
DC
12
ATOM
B
O4'
DC
1
2
1.00
1
O
17.91
16.602
16.915
19.414
B
C3'
DC
12
ATOM
B
C3'
DC
1
2
1.00
1
C
25.75
17.731
16.182
19.827
B
O3'
DC
12
ATOM
B
O3'
DC
1
2
1.00
1
O
18.20
15.486
16.793
20.440
B
C2'
DC
12
ATOM
B
C2'
DC
1
2
1.00
1
C
24.60
15.649
18.011
21.288
B
C1'
DC
12
ATOM
B
C1'
DC
1
2
1.00
1
C
22.58
14.478
18.618
21.908
B
N1
DC
12
ATOM
B
N1
DC
1
2
1.00
1
N
29.65
14.534
18.739
23.308
B
C2
DC
12
ATOM
B
C2
DC
1
2
1.00
1
C
27.85
15.565
18.336
23.887
B
O2
DC
12
ATOM
B
O2
DC
1
2
1.00
1
O
25.89
13.473
19.209
24.006
B
N3
DC
12
ATOM
B
N3
DC
1
2
1.00
1
N
21.21
12.431
19.669
23.323
B
C4
DC
12
ATOM
B
C4
DC
1
2
1.00
1
C
23.81
11.423
20.227
24.002
B
N4
DC
12
ATOM
B
N4
DC
1
2
1.00
1
N
22.46
12.364
19.600
21.896
B
C5
DC
12
ATOM
B
C5
DC
1
2
1.00
1
C
20.50
13.406
19.074
21.227
B
C6
DC
12
ATOM
B
C6
DC
1
2
1.00
1
C
31.75
17.883
14.581
19.653
B
P
DG
13
ATOM
B
P
DG
1
3
1.00
1
P
32.36
19.351
14.344
19.700
B
OP1
DG
13
ATOM
B
OP1
DG
1
3
1.00
1
O
41.70
17.063
14.175
18.502
B
OP2
DG
13
ATOM
B
OP2
DG
1
3
1.00
1
O
24.40
17.184
13.953
20.957
B
O5'
DG
13
ATOM
B
O5'
DG
1
3
1.00
1
O
27.77
17.613
14.360
22.278
B
C5'
DG
13
ATOM
B
C5'
DG
1
3
1.00
1
C
30.17
16.715
13.727
23.326
B
C4'
DG
13
ATOM
B
C4'
DG
1
3
1.00
1
C
27.33
15.438
14.403
23.263
B
O4'
DG
13
ATOM
B
O4'
DG
1
3
1.00
1
O
28.22
16.381
12.255
23.017
B
C3'
DG
13
ATOM
B
C3'
DG
1
3
1.00
1
C
35.76
16.047
11.596
24.247
B
O3'
DG
13
ATOM
B
O3'
DG
1
3
1.00
1
O
26.14
15.119
12.371
22.185
B
C2'
DG
13
ATOM
B
C2'
DG
1
3
1.00
1
C
26.41
14.396
13.493
22.931
B
C1'
DG
13
ATOM
B
C1'
DG
1
3
1.00
1
C
27.02
13.413
14.201
22.127
B
N9
DG
13
ATOM
B
N9
DG
1
3
1.00
1
N
25.30
13.311
14.107
20.753
B
C8
DG
13
ATOM
B
C8
DG
1
3
1.00
1
C
24.96
12.441
14.938
20.252
B
N7
DG
13
ATOM
B
N7
DG
1
3
1.00
1
N
25.57
11.851
15.529
21.364
B
C5
DG
13
ATOM
B
C5
DG
1
3
1.00
1
C
21.21
10.855
16.538
21.440
B
C6
DG
13
ATOM
B
C6
DG
1
3
1.00
1
C
26.34
10.186
17.066
20.539
B
O6
DG
13
ATOM
B
O6
DG
1
3
1.00
1
O
24.17
10.576
16.892
22.757
B
N1
DG
13
ATOM
B
N1
DG
1
3
1.00
1
N
29.94
11.225
16.374
23.858
B
C2
DG
13
ATOM
B
C2
DG
1
3
1.00
1
C
24.29
10.874
16.806
25.076
B
N2
DG
13
ATOM
B
N2
DG
1
3
1.00
1
N
20.16
12.222
15.515
23.795
B
N3
DG
13
ATOM
B
N3
DG
1
3
1.00
1
N
28.71
12.465
15.100
22.523
B
C4
DG
13
ATOM
B
C4
DG
1
3
1.00
1
C
42.39
16.647
10.108
24.468
B
P
DA
14
ATOM
B
P
DA
1
4
1.00
1
P
40.33
18.004
10.111
23.845
B
OP1
DA
14
ATOM
B
OP1
DA
1
4
1.00
1
O
37.65
15.623
9.146
24.009
B
OP2
DA
14
ATOM
B
OP2
DA
1
4
1.00
1
O
31.40
16.789
9.989
26.044
B
O5'
DA
14
ATOM
B
O5'
DA
1
4
1.00
1
O
31.31
17.700
10.784
26.812
B
C5'
DA
14
ATOM
B
C5'
DA
1
4
1.00
1
C
33.12
17.285
11.035
28.225
B
C4'
DA
14
ATOM
B
C4'
DA
1
4
1.00
1
C
28.96
16.288
12.057
28.424
B
O4'
DA
14
ATOM
B
O4'
DA
1
4
1.00
1
O
26.56
16.866
9.847
29.087
B
C3'
DA
14
ATOM
B
C3'
DA
1
4
1.00
1
C
34.07
17.412
10.048
30.417
B
O3'
DA
14
ATOM
B
O3'
DA
1
4
1.00
1
O
26.96
15.365
10.016
29.226
B
C2'
DA
14
ATOM
B
C2'
DA
1
4
1.00
1
C
30.51
15.134
11.499
29.031
B
C1'
DA
14
ATOM
B
C1'
DA
1
4
1.00
1
C
26.55
13.915
11.793
28.279
B
N9
DA
14
ATOM
B
N9
DA
1
4
1.00
1
N
31.93
13.757
11.931
26.924
B
C8
DA
14
ATOM
B
C8
DA
1
4
1.00
1
C
32.64
12.509
11.920
26.505
B
N7
DA
14
ATOM
B
N7
DA
1
4
1.00
1
N
24.65
11.803
11.841
27.691
B
C5
DA
14
ATOM
B
C5
DA
1
4
1.00
1
C
29.32
10.419
11.764
27.925
B
C6
DA
14
ATOM
B
C6
DA
1
4
1.00
1
C
24.31
9.552
11.864
26.914
B
N6
DA
14
ATOM
B
N6
DA
1
4
1.00
1
N
28.84
10.019
11.751
29.217
B
N1
DA
14
ATOM
B
N1
DA
1
4
1.00
1
N
23.09
10.939
11.698
30.186
B
C2
DA
14
ATOM
B
C2
DA
1
4
1.00
1
C
23.88
12.269
11.708
30.093
B
N3
DA
14
ATOM
B
N3
DA
1
4
1.00
1
N
21.62
12.635
11.753
28.796
B
C4
DA
14
ATOM
B
C4
DA
1
4
1.00
1
C
43.40
17.586
8.762
31.356
B
P
DA
15
ATOM
B
P
DA
1
5
1.00
1
P
42.46
18.222
9.197
32.620
B
OP1
DA
15
ATOM
B
OP1
DA
1
5
1.00
1
O
32.77
18.105
7.667
30.518
B
OP2
DA
15
ATOM
B
OP2
DA
1
5
1.00
1
O
39.79
16.080
8.327
31.712
B
O5'
DA
15
ATOM
B
O5'
DA
1
5
1.00
1
O
35.77
15.386
9.144
32.673
B
C5'
DA
15
ATOM
B
C5'
DA
1
5
1.00
1
C
33.16
13.965
8.655
32.778
B
C4'
DA
15
ATOM
B
C4'
DA
1
5
1.00
1
C
29.58
13.305
8.784
31.519
B
O4'
DA
15
ATOM
B
O4'
DA
1
5
1.00
1
O
34.83
13.803
7.187
33.200
B
C3'
DA
15
ATOM
B
C3'
DA
1
5
1.00
1
C
28.70
12.723
7.185
34.147
B
O3'
DA
15
ATOM
B
O3'
DA
1
5
1.00
1
O
28.18
13.341
6.473
31.943
B
C2'
DA
15
ATOM
B
C2'
DA
1
5
1.00
1
C
23.54
12.645
7.579
31.156
B
C1'
DA
15
ATOM
B
C1'
DA
1
5
1.00
1
C
21.88
12.846
7.443
29.709
B
N9
DA
15
ATOM
B
N9
DA
1
5
1.00
1
N
20.43
13.971
7.157
28.972
B
C8
DA
15
ATOM
B
C8
DA
1
5
1.00
1
C
30.15
13.760
7.298
27.679
B
N7
DA
15
ATOM
B
N7
DA
1
5
1.00
1
N
29.01
12.457
7.767
27.569
B
C5
DA
15
ATOM
B
C5
DA
1
5
1.00
1
C
26.12
11.621
8.148
26.509
B
C6
DA
15
ATOM
B
C6
DA
1
5
1.00
1
C
26.79
11.997
8.105
25.230
B
N6
DA
15
ATOM
B
N6
DA
1
5
1.00
1
N
31.45
10.323
8.486
26.734
B
N1
DA
15
ATOM
B
N1
DA
1
5
1.00
1
N
29.16
9.918
8.501
28.013
B
C2
DA
15
ATOM
B
C2
DA
1
5
1.00
1
C
31.17
10.608
8.193
29.107
B
N3
DA
15
ATOM
B
N3
DA
1
5
1.00
1
N
24.83
11.879
7.847
28.817
B
C4
DA
15
ATOM
B
C4
DA
1
5
1.00
1
C
25.88
9.233
4.880
29.883
B
N1
BRU
16
HETATM
B
N1
BRU
1
6
1.00
1
N
27.10
8.607
5.237
28.724
B
C2
BRU
16
HETATM
B
C2
BRU
1
6
1.00
1
C
25.88
9.357
5.146
27.563
B
N3
BRU
16
HETATM
B
N3
BRU
1
6
1.00
1
N
27.65
10.684
4.763
27.512
B
C4
BRU
16
HETATM
B
C4
BRU
1
6
1.00
1
C
32.29
11.242
4.325
28.775
B
C5
BRU
16
HETATM
B
C5
BRU
1
6
1.00
1
C
17.34
10.561
4.502
29.900
B
C6
BRU
16
HETATM
B
C6
BRU
1
6
1.00
1
C
33.63
7.450
5.619
28.685
B
O2
BRU
16
HETATM
B
O2
BRU
1
6
1.00
1
O
30.83
11.296
4.636
26.458
B
O4
BRU
16
HETATM
B
O4
BRU
1
6
1.00
1
O
34.12
13.035
3.811
28.812
B
BR
BRU
16
HETATM
B
BR
BRU
1
6
1.00
1
BR
24.16
8.498
4.937
31.161
B
C1'
BRU
16
HETATM
B
C1'
BRU
1
6
1.00
1
C
30.42
8.602
3.753
32.105
B
C2'
BRU
16
HETATM
B
C2'
BRU
1
6
1.00
1
C
21.83
8.313
4.396
33.446
B
C3'
BRU
16
HETATM
B
C3'
BRU
1
6
1.00
1
C
33.98
8.813
5.839
33.277
B
C4'
BRU
16
HETATM
B
C4'
BRU
1
6
1.00
1
C
33.11
6.891
4.559
33.618
B
O3'
BRU
16
HETATM
B
O3'
BRU
1
6
1.00
1
O
34.55
9.098
6.010
31.883
B
O4'
BRU
16
HETATM
B
O4'
BRU
1
6
1.00
1
O
31.26
9.922
6.276
34.163
B
C5'
BRU
16
HETATM
B
C5'
BRU
1
6
1.00
1
C
38.16
11.007
5.351
34.217
B
O5'
BRU
16
HETATM
B
O5'
BRU
1
6
1.00
1
O
36.44
12.379
5.803
34.918
B
P
BRU
16
HETATM
B
P
BRU
1
6
1.00
1
P
33.04
12.125
6.136
36.326
B
OP1
BRU
16
HETATM
B
OP1
BRU
1
6
1.00
1
O
34.24
13.354
4.788
34.454
B
OP2
BRU
16
HETATM
B
OP2
BRU
1
6
1.00
1
O
38.03
6.040
3.315
34.146
B
P
DG
17
ATOM
B
P
DG
1
7
1.00
1
P
39.28
4.969
3.833
35.017
B
OP1
DG
17
ATOM
B
OP1
DG
1
7
1.00
1
O
25.13
6.969
2.257
34.607
B
OP2
DG
17
ATOM
B
OP2
DG
1
7
1.00
1
O
30.24
5.441
2.727
32.779
B
O5'
DG
17
ATOM
B
O5'
DG
1
7
1.00
1
O
30.69
4.773
3.536
31.806
B
C5'
DG
17
ATOM
B
C5'
DG
1
7
1.00
1
C
28.32
4.603
2.741
30.519
B
C4'
DG
17
ATOM
B
C4'
DG
1
7
1.00
1
C
27.85
5.899
2.501
29.922
B
O4'
DG
17
ATOM
B
O4'
DG
1
7
1.00
1
O
28.73
3.955
1.384
30.670
B
C3'
DG
17
ATOM
B
C3'
DG
1
7
1.00
1
C
25.65
3.172
1.063
29.502
B
O3'
DG
17
ATOM
B
O3'
DG
1
7
1.00
1
O
31.08
5.117
0.414
30.678
B
C2'
DG
17
ATOM
B
C2'
DG
1
7
1.00
1
C
31.78
6.102
1.107
29.752
B
C1'
DG
17
ATOM
B
C1'
DG
1
7
1.00
1
C
27.31
7.518
0.827
29.958
B
N9
DG
17
ATOM
B
N9
DG
1
7
1.00
1
N
34.43
8.092
0.415
31.144
B
C8
DG
17
ATOM
B
C8
DG
1
7
1.00
1
C
29.94
9.398
0.319
31.072
B
N7
DG
17
ATOM
B
N7
DG
1
7
1.00
1
N
28.45
9.692
0.608
29.746
B
C5
DG
17
ATOM
B
C5
DG
1
7
1.00
1
C
29.53
10.941
0.697
29.078
B
C6
DG
17
ATOM
B
C6
DG
1
7
1.00
1
C
35.86
12.062
0.372
29.497
B
O6
DG
17
ATOM
B
O6
DG
1
7
1.00
1
O
26.56
10.796
1.114
27.760
B
N1
DG
17
ATOM
B
N1
DG
1
7
1.00
1
N
29.70
9.605
1.461
27.166
B
C2
DG
17
ATOM
B
C2
DG
1
7
1.00
1
C
29.31
9.596
1.858
25.891
B
N2
DG
17
ATOM
B
N2
DG
1
7
1.00
1
N
22.17
8.469
1.512
27.821
B
N3
DG
17
ATOM
B
N3
DG
1
7
1.00
1
N
28.60
8.552
1.027
29.083
B
C4
DG
17
ATOM
B
C4
DG
1
7
1.00
1
C
36.05
1.719
0.421
29.814
B
P
DA
18
ATOM
B
P
DA
1
8
1.00
1
P
33.59
1.076
1.249
30.860
B
OP1
DA
18
ATOM
B
OP1
DA
1
8
1.00
1
O
32.64
1.899
-1.035
30.042
B
OP2
DA
18
ATOM
B
OP2
DA
1
8
1.00
1
O
30.85
0.966
0.638
28.438
B
O5'
DA
18
ATOM
B
O5'
DA
1
8
1.00
1
O
30.02
0.703
1.971
27.948
B
C5'
DA
18
ATOM
B
C5'
DA
1
8
1.00
1
C
36.39
0.166
1.903
26.551
B
C4'
DA
18
ATOM
B
C4'
DA
1
8
1.00
1
C
38.05
1.253
1.737
25.613
B
O4'
DA
18
ATOM
B
O4'
DA
1
8
1.00
1
O
33.05
-0.773
0.718
26.285
B
C3'
DA
18
ATOM
B
C3'
DA
1
8
1.00
1
C
34.61
-1.564
1.128
25.147
B
O3'
DA
18
ATOM
B
O3'
DA
1
8
1.00
1
O
37.62
0.182
-0.354
25.793
B
C2'
DA
18
ATOM
B
C2'
DA
1
8
1.00
1
C
29.40
1.178
0.461
24.988
B
C1'
DA
18
ATOM
B
C1'
DA
1
8
1.00
1
C
28.30
2.541
-0.069
24.989
B
N9
DA
18
ATOM
B
N9
DA
1
8
1.00
1
N
29.17
3.430
-0.169
26.039
B
C8
DA
18
ATOM
B
C8
DA
1
8
1.00
1
C
27.71
4.574
-0.726
25.706
B
N7
DA
18
ATOM
B
N7
DA
1
8
1.00
1
N
19.77
4.438
-0.914
24.337
B
C5
DA
18
ATOM
B
C5
DA
1
8
1.00
1
C
23.98
5.303
-1.431
23.360
B
C6
DA
18
ATOM
B
C6
DA
1
8
1.00
1
C
25.32
6.515
-1.873
23.732
B
N6
DA
18
ATOM
B
N6
DA
1
8
1.00
1
N
28.19
4.887
-1.400
22.091
B
N1
DA
18
ATOM
B
N1
DA
1
8
1.00
1
N
16.72
3.658
-0.920
21.744
B
C2
DA
18
ATOM
B
C2
DA
1
8
1.00
1
C
26.10
2.777
-0.420
22.613
B
N3
DA
18
ATOM
B
N3
DA
1
8
1.00
1
N
24.58
3.233
-0.436
23.866
B
C4
DA
18
ATOM
B
C4
DA
1
8
1.00
1
C
41.34
-2.925
0.296
24.872
B
P
DG
19
ATOM
B
P
DG
1
9
1.00
1
P
36.95
-3.829
1.256
24.217
B
OP1
DG
19
ATOM
B
OP1
DG
1
9
1.00
1
O
25.09
-3.240
-0.429
26.116
B
OP2
DG
19
ATOM
B
OP2
DG
1
9
1.00
1
O
39.17
-2.422
-0.822
23.828
B
O5'
DG
19
ATOM
B
O5'
DG
1
9
1.00
1
O
30.64
-1.702
-0.357
22.673
B
C5'
DG
19
ATOM
B
C5'
DG
1
9
1.00
1
C
27.98
-1.175
-1.483
21.825
B
C4'
DG
19
ATOM
B
C4'
DG
1
9
1.00
1
C
27.25
-0.013
-2.043
22.487
B
O4'
DG
19
ATOM
B
O4'
DG
1
9
1.00
1
O
20.89
-2.161
-2.635
21.620
B
C3'
DG
19
ATOM
B
C3'
DG
1
9
1.00
1
C
27.24
-1.948
-3.132
20.293
B
O3'
DG
19
ATOM
B
O3'
DG
1
9
1.00
1
O
24.11
-1.677
-3.651
22.636
B
C2'
DG
19
ATOM
B
C2'
DG
1
9
1.00
1
C
27.18
-0.169
-3.446
22.651
B
C1'
DG
19
ATOM
B
C1'
DG
1
9
1.00
1
C
28.71
0.461
-3.780
23.930
B
N9
DG
19
ATOM
B
N9
DG
1
9
1.00
1
N
27.63
-0.100
-3.757
25.176
B
C8
DG
19
ATOM
B
C8
DG
1
9
1.00
1
C
34.32
0.757
-4.020
26.130
B
N7
DG
19
ATOM
B
N7
DG
1
9
1.00
1
N
28.25
1.953
-4.264
25.477
B
C5
DG
19
ATOM
B
C5
DG
1
9
1.00
1
C
30.60
3.285
-4.447
25.965
B
C6
DG
19
ATOM
B
C6
DG
1
9
1.00
1
C
31.23
3.608
-4.555
27.153
B
O6
DG
19
ATOM
B
O6
DG
1
9
1.00
1
O
30.35
4.214
-4.591
24.934
B
N1
DG
19
ATOM
B
N1
DG
1
9
1.00
1
N
32.68
3.916
-4.463
23.591
B
C2
DG
19
ATOM
B
C2
DG
1
9
1.00
1
C
28.43
4.928
-4.611
22.710
B
N2
DG
19
ATOM
B
N2
DG
1
9
1.00
1
N
25.53
2.713
-4.156
23.133
B
N3
DG
19
ATOM
B
N3
DG
1
9
1.00
1
N
28.69
1.790
-4.115
24.106
B
C4
DG
19
ATOM
B
C4
DG
1
9
1.00
1
C
29.04
-2.791
-2.700
19.019
B
P
DG
20
ATOM
B
P
DG
1
10
1.00
1
P
37.50
-1.843
-2.251
17.966
B
OP1
DG
20
ATOM
B
OP1
DG
1
10
1.00
1
O
30.71
-3.898
-1.819
19.448
B
OP2
DG
20
ATOM
B
OP2
DG
1
10
1.00
1
O
28.58
-3.444
-4.075
18.535
B
O5'
DG
20
ATOM
B
O5'
DG
1
10
1.00
1
O
31.31
-4.436
-4.728
19.350
B
C5'
DG
20
ATOM
B
C5'
DG
1
10
1.00
1
C
30.60
-4.658
-6.192
19.066
B
C4'
DG
20
ATOM
B
C4'
DG
1
10
1.00
1
C
23.77
-3.469
-6.966
19.379
B
O4'
DG
20
ATOM
B
O4'
DG
1
10
1.00
1
O
26.15
-5.777
-6.821
19.890
B
C3'
DG
20
ATOM
B
C3'
DG
1
10
1.00
1
C
24.02
-7.064
-6.754
19.258
B
O3'
DG
20
ATOM
B
O3'
DG
1
10
1.00
1
O
25.39
-5.357
-8.214
20.195
B
C2'
DG
20
ATOM
B
C2'
DG
1
10
1.00
1
C
25.21
-3.847
-8.218
19.967
B
C1'
DG
20
ATOM
B
C1'
DG
1
10
1.00
1
C
26.04
-3.053
-8.327
21.188
B
N9
DG
20
ATOM
B
N9
DG
1
10
1.00
1
N
24.03
-1.957
-9.145
21.384
B
C8
DG
20
ATOM
B
C8
DG
1
10
1.00
1
C
27.11
-1.519
-9.099
22.608
B
N7
DG
20
ATOM
B
N7
DG
1
10
1.00
1
N
27.33
-2.274
-8.103
23.218
B
C5
DG
20
ATOM
B
C5
DG
1
10
1.00
1
C
24.24
-2.141
-7.514
24.496
B
C6
DG
20
ATOM
B
C6
DG
1
10
1.00
1
C
29.91
-1.363
-7.797
25.420
B
O6
DG
20
ATOM
B
O6
DG
1
10
1.00
1
O
22.99
-3.096
-6.523
24.730
B
N1
DG
20
ATOM
B
N1
DG
1
10
1.00
1
N
24.85
-4.012
-6.106
23.786
B
C2
DG
20
ATOM
B
C2
DG
1
10
1.00
1
C
25.63
-4.835
-5.124
24.185
B
N2
DG
20
ATOM
B
N2
DG
1
10
1.00
1
N
25.26
-4.159
-6.671
22.600
B
N3
DG
20
ATOM
B
N3
DG
1
10
1.00
1
N
25.17
-3.178
-7.562
22.326
B
C4
DG
20
ATOM
B
C4
DG
1
10
1.00
1
C
38.90
3.484
14.891
20.702
A
N1
SPM
24
HETATM
C
N1
SPM
2
0.50
1
N
47.35
4.705
15.663
20.133
A
C2
SPM
24
HETATM
C
C2
SPM
2
0.50
1
C
52.31
5.468
14.743
19.191
A
C3
SPM
24
HETATM
C
C3
SPM
2
0.50
1
C
50.41
6.253
15.575
18.187
A
C4
SPM
24
HETATM
C
C4
SPM
2
0.50
1
C
45.24
7.770
15.293
18.363
A
N5
SPM
24
HETATM
C
N5
SPM
2
0.50
1
N
50.37
8.548
16.044
17.246
A
C6
SPM
24
HETATM
C
C6
SPM
2
0.50
1
C
47.49
9.986
16.246
17.705
A
C7
SPM
24
HETATM
C
C7
SPM
2
0.50
1
C
47.49
10.966
16.246
16.540
A
C8
SPM
24
HETATM
C
C8
SPM
2
0.50
1
C
50.37
12.404
16.044
16.999
A
C9
SPM
24
HETATM
C
C9
SPM
2
0.50
1
C
45.24
13.182
15.293
15.882
A
N10
SPM
24
HETATM
C
N10
SPM
2
0.50
1
N
50.41
14.699
15.575
16.058
A
C11
SPM
24
HETATM
C
C11
SPM
2
0.50
1
C
52.31
15.484
14.743
15.054
A
C12
SPM
24
HETATM
C
C12
SPM
2
0.50
1
C
47.35
16.247
15.663
14.112
A
C13
SPM
24
HETATM
C
C13
SPM
2
0.50
1
C
38.90
17.468
14.891
13.543
A
N14
SPM
24
HETATM
C
N14
SPM
2
0.50
1
N
41.06
17.377
21.180
37.570
A
MG
MG
21
HETATM
D
MG
MG
3
1.00
1
MG
35.87
9.358
20.859
29.507
A
MG
MG
22
HETATM
E
MG
MG
3
1.00
1
MG
55.86
12.311
3.370
33.301
B
NA
NA
25
HETATM
F
NA
NA
4
1.00
1
NA
31.83
0.000
-2.173
17.122
B
MG
MG
23
HETATM
G
MG
MG
3
0.50
1
MG
30.56
6.661
-3.186
30.867
A
O
HOH
1004
HETATM
H
O
HOH
5
1.00
1
O
39.43
17.447
18.209
29.759
A
O
HOH
1005
HETATM
H
O
HOH
5
1.00
1
O
37.14
3.198
5.511
27.728
A
O
HOH
1006
HETATM
H
O
HOH
5
1.00
1
O
30.33
7.115
-5.511
31.038
A
O
HOH
1011
HETATM
H
O
HOH
5
1.00
1
O
49.39
13.563
23.565
31.489
A
O
HOH
1012
HETATM
H
O
HOH
5
1.00
1
O
43.20
12.234
10.642
20.686
A
O
HOH
1013
HETATM
H
O
HOH
5
1.00
1
O
34.02
10.695
-2.240
32.422
A
O
HOH
1015
HETATM
H
O
HOH
5
1.00
1
O
39.92
13.842
14.644
37.775
A
O
HOH
1017
HETATM
H
O
HOH
5
1.00
1
O
51.00
18.390
15.390
26.809
A
O
HOH
1018
HETATM
H
O
HOH
5
1.00
1
O
34.45
3.660
8.028
25.596
A
O
HOH
1021
HETATM
H
O
HOH
5
1.00
1
O
38.53
15.898
14.164
32.414
A
O
HOH
1023
HETATM
H
O
HOH
5
1.00
1
O
43.42
13.372
-2.212
18.665
A
O
HOH
1026
HETATM
H
O
HOH
5
1.00
1
O
47.01
13.111
3.594
22.621
A
O
HOH
1030
HETATM
H
O
HOH
5
1.00
1
O
40.42
14.611
-1.745
24.253
A
O
HOH
1031
HETATM
H
O
HOH
5
1.00
1
O
22.60
5.452
13.232
30.951
A
O
HOH
1034
HETATM
A
H
O
HOH
5
0.50
1
O
34.15
3.569
12.767
30.359
A
O
HOH
1034
HETATM
B
H
O
HOH
5
0.50
1
O
46.65
23.659
23.238
30.565
A
O
HOH
1036
HETATM
H
O
HOH
5
1.00
1
O
41.02
11.545
-1.031
17.912
A
O
HOH
1037
HETATM
H
O
HOH
5
1.00
1
O
42.05
9.468
-8.450
19.397
A
O
HOH
1038
HETATM
H
O
HOH
5
1.00
1
O
46.97
14.475
1.594
23.402
A
O
HOH
1041
HETATM
H
O
HOH
5
1.00
1
O
49.17
10.475
9.196
17.122
A
O
HOH
1042
HETATM
H
O
HOH
5
0.50
1
O
51.34
11.595
-9.062
19.787
A
O
HOH
1045
HETATM
H
O
HOH
5
1.00
1
O
36.94
0.292
17.487
25.719
A
O
HOH
1046
HETATM
H
O
HOH
5
0.50
1
O
50.89
11.502
-5.319
17.586
A
O
HOH
1048
HETATM
H
O
HOH
5
0.50
1
O
51.53
15.059
-1.350
21.969
A
O
HOH
1050
HETATM
H
O
HOH
5
1.00
1
O
38.73
18.000
17.034
32.645
A
O
HOH
1051
HETATM
H
O
HOH
5
0.50
1
O
54.32
9.907
-10.231
21.215
A
O
HOH
1052
HETATM
H
O
HOH
5
1.00
1
O
40.26
14.732
22.378
40.509
A
O
HOH
1054
HETATM
H
O
HOH
5
0.50
1
O
45.59
14.906
3.189
21.204
A
O
HOH
1055
HETATM
H
O
HOH
5
1.00
1
O
52.79
7.817
-7.206
21.177
A
O
HOH
1058
HETATM
H
O
HOH
5
1.00
1
O
52.33
2.038
2.396
21.815
A
O
HOH
1059
HETATM
H
O
HOH
5
1.00
1
O
27.86
-1.071
13.399
25.576
A
O
HOH
1060
HETATM
H
O
HOH
5
0.50
1
O
48.43
14.239
1.686
19.656
A
O
HOH
1061
HETATM
H
O
HOH
5
1.00
1
O
47.94
11.257
22.399
34.408
A
O
HOH
1063
HETATM
H
O
HOH
5
1.00
1
O
58.12
15.744
0.356
17.498
A
O
HOH
1064
HETATM
H
O
HOH
5
1.00
1
O
44.25
19.422
19.514
26.354
A
O
HOH
1065
HETATM
H
O
HOH
5
1.00
1
O
40.11
5.375
11.978
19.837
A
O
HOH
1069
HETATM
H
O
HOH
5
0.50
1
O
28.82
0.353
8.077
26.405
A
O
HOH
1072
HETATM
H
O
HOH
5
0.50
1
O
33.85
0.264
16.417
27.496
A
O
HOH
1073
HETATM
H
O
HOH
5
0.50
1
O
40.90
4.048
17.242
24.270
A
O
HOH
1074
HETATM
H
O
HOH
5
1.00
1
O
36.20
10.100
5.585
20.191
A
O
HOH
1075
HETATM
H
O
HOH
5
0.50
1
O
51.40
10.123
19.968
33.938
A
O
HOH
1076
HETATM
H
O
HOH
5
1.00
1
O
42.05
9.780
-9.895
23.691
A
O
HOH
1077
HETATM
H
O
HOH
5
0.50
1
O
44.63
16.619
22.853
36.636
A
O
HOH
1078
HETATM
H
O
HOH
5
1.00
1
O
30.04
18.110
19.478
38.459
A
O
HOH
1079
HETATM
H
O
HOH
5
1.00
1
O
56.29
15.460
20.407
37.617
A
O
HOH
1080
HETATM
H
O
HOH
5
1.00
1
O
65.88
17.036
22.024
39.419
A
O
HOH
1081
HETATM
H
O
HOH
5
1.00
1
O
33.19
19.270
21.991
37.555
A
O
HOH
1082
HETATM
H
O
HOH
5
1.00
1
O
43.39
8.795
19.643
31.066
A
O
HOH
1083
HETATM
H
O
HOH
5
1.00
1
O
28.22
9.858
22.080
27.913
A
O
HOH
1084
HETATM
H
O
HOH
5
1.00
1
O
34.67
9.952
22.314
30.852
A
O
HOH
1085
HETATM
H
O
HOH
5
1.00
1
O
42.14
7.469
21.698
29.495
A
O
HOH
1086
HETATM
H
O
HOH
5
1.00
1
O
28.78
8.718
19.442
28.151
A
O
HOH
1087
HETATM
H
O
HOH
5
1.00
1
O
17.88
6.663
-3.251
19.159
B
O
HOH
1001
HETATM
A
I
O
HOH
5
0.50
1
O
36.50
6.831
-2.741
20.866
B
O
HOH
1001
HETATM
B
I
O
HOH
5
0.50
1
O
28.15
2.551
-3.908
20.389
B
O
HOH
1003
HETATM
I
O
HOH
5
1.00
1
O
28.52
9.921
24.872
19.845
B
O
HOH
1007
HETATM
I
O
HOH
5
1.00
1
O
32.06
10.499
20.346
18.691
B
O
HOH
1008
HETATM
I
O
HOH
5
1.00
1
O
34.45
12.803
1.686
25.768
B
O
HOH
1009
HETATM
I
O
HOH
5
1.00
1
O
40.66
9.821
5.460
37.029
B
O
HOH
1010
HETATM
I
O
HOH
5
1.00
1
O
37.61
11.251
0.754
32.600
B
O
HOH
1014
HETATM
I
O
HOH
5
1.00
1
O
50.89
20.748
17.218
19.981
B
O
HOH
1016
HETATM
I
O
HOH
5
1.00
1
O
48.61
18.213
17.735
24.580
B
O
HOH
1019
HETATM
I
O
HOH
5
1.00
1
O
42.86
1.142
0.515
20.478
B
O
HOH
1020
HETATM
I
O
HOH
5
1.00
1
O
41.09
13.645
12.048
32.562
B
O
HOH
1022
HETATM
I
O
HOH
5
1.00
1
O
34.12
7.816
0.000
34.245
B
O
HOH
1024
HETATM
I
O
HOH
5
0.50
1
O
50.41
0.821
3.915
31.105
B
O
HOH
1025
HETATM
I
O
HOH
5
1.00
1
O
46.55
2.098
-1.895
33.203
B
O
HOH
1027
HETATM
I
O
HOH
5
1.00
1
O
18.06
1.597
0.874
17.144
B
O
HOH
1028
HETATM
A
I
O
HOH
5
0.50
1
O
23.08
2.942
0.700
18.322
B
O
HOH
1028
HETATM
B
I
O
HOH
5
0.50
1
O
47.71
15.249
6.868
25.539
B
O
HOH
1032
HETATM
I
O
HOH
5
1.00
1
O
45.75
5.318
6.660
35.619
B
O
HOH
1033
HETATM
I
O
HOH
5
1.00
1
O
42.69
17.009
19.129
14.470
B
O
HOH
1039
HETATM
I
O
HOH
5
1.00
1
O
50.36
18.014
11.404
34.340
B
O
HOH
1040
HETATM
I
O
HOH
5
1.00
1
O
41.71
3.808
-2.801
29.437
B
O
HOH
1043
HETATM
I
O
HOH
5
1.00
1
O
53.89
-1.803
5.309
33.360
B
O
HOH
1044
HETATM
I
O
HOH
5
1.00
1
O
48.87
-3.060
-5.572
27.753
B
O
HOH
1047
HETATM
I
O
HOH
5
1.00
1
O
56.55
14.174
2.771
38.671
B
O
HOH
1049
HETATM
I
O
HOH
5
1.00
1
O
36.40
-3.185
3.602
27.680
B
O
HOH
1053
HETATM
I
O
HOH
5
0.50
1
O
34.07
14.815
11.899
18.450
B
O
HOH
1056
HETATM
A
I
O
HOH
5
0.50
1
O
32.79
6.549
12.726
17.293
B
O
HOH
1056
HETATM
B
I
O
HOH
5
0.50
1
O
52.62
-1.975
3.278
31.379
B
O
HOH
1062
HETATM
I
O
HOH
5
0.50
1
O
52.53
12.819
4.670
38.386
B
O
HOH
1066
HETATM
I
O
HOH
5
1.00
1
O
42.12
-1.551
-6.732
28.935
B
O
HOH
1067
HETATM
I
O
HOH
5
0.50
1
O
34.84
17.121
5.277
26.496
B
O
HOH
1068
HETATM
I
O
HOH
5
0.50
1
O
49.87
13.833
0.000
34.245
B
O
HOH
1070
HETATM
I
O
HOH
5
0.50
1
O
43.77
-0.742
-1.616
34.010
B
O
HOH
1071
HETATM
I
O
HOH
5
0.50
1
O
46.10
-0.538
-2.181
15.138
B
O
HOH
1088
HETATM
I
O
HOH
5
0.50
1
O
46.10
0.539
-2.181
19.107
B
O
HOH
1089
HETATM
I
O
HOH
5
0.50
1
O
41.79
0.000
-0.111
17.122
B
O
HOH
1090
HETATM
I
O
HOH
5
0.50
1
O
73.53
0.000
-4.235
17.122
B
O
HOH
1091
HETATM
I
O
HOH
5
0.50
1
O
0.047733
0.000000
0.000000
0.000000
0.016166
0.000000
0.000000
0.000000
0.014601
0.00000
0.00000
0.00000
Gao, Y.-G.
Robinson, H.
Sanishvili, R.
Joachimiak, A.
Wang, A.H.-J.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
16
90.00
90.00
90.00
20.950
61.860
68.490
C9 H12 Br N2 O8 P
387.078
n
5-BROMO-2'-DEOXYURIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O6 P
331.222
y
2'-DEOXYADENOSINE-5'-MONOPHOSPHATE
DNA linking
C9 H14 N3 O7 P
307.197
y
2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE
DNA linking
C10 H14 N5 O7 P
347.221
y
2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE
DNA linking
H2 O
18.015
WATER
non-polymer
Mg 2
24.305
MAGNESIUM ION
non-polymer
Na 1
22.990
SODIUM ION
non-polymer
C10 H26 N4
202.340
SPERMINE
non-polymer
N
1
N
N
N
2
N
C
N
3
N
N
N
4
N
C
N
5
N
C
N
6
N
C
N
7
N
O
N
8
N
O
N
9
N
BR
N
10
R
C
N
11
N
C
N
12
S
C
N
13
R
C
N
14
N
O
N
15
N
O
N
16
N
C
N
17
N
O
N
18
N
P
N
19
N
O
N
20
N
O
N
21
N
O
N
22
N
H
N
23
N
H
N
24
N
H
N
25
N
H
N
26
N
H
N
27
N
H
N
28
N
H
N
29
N
H
N
30
N
H
N
31
N
H
N
32
N
H
N
33
N
H
N
34
N
O
N
35
N
P
N
36
N
O
N
37
N
O
N
38
N
O
N
39
N
C
N
40
R
C
N
41
N
O
N
42
S
C
N
43
N
O
N
44
N
C
N
45
R
C
Y
46
N
N
Y
47
N
C
Y
48
N
N
Y
49
N
C
Y
50
N
C
N
51
N
N
Y
52
N
N
Y
53
N
C
Y
54
N
N
Y
55
N
C
N
56
N
H
N
57
N
H
N
58
N
H
N
59
N
H
N
60
N
H
N
61
N
H
N
62
N
H
N
63
N
H
N
64
N
H
N
65
N
H
N
66
N
H
N
67
N
H
N
68
N
H
N
69
N
H
N
70
N
O
N
71
N
P
N
72
N
O
N
73
N
O
N
74
N
O
N
75
N
C
N
76
R
C
N
77
N
O
N
78
S
C
N
79
N
O
N
80
N
C
N
81
R
C
N
82
N
N
N
83
N
C
N
84
N
O
N
85
N
N
N
86
N
C
N
87
N
N
N
88
N
C
N
89
N
C
N
90
N
H
N
91
N
H
N
92
N
H
N
93
N
H
N
94
N
H
N
95
N
H
N
96
N
H
N
97
N
H
N
98
N
H
N
99
N
H
N
100
N
H
N
101
N
H
N
102
N
H
N
103
N
H
N
104
N
O
N
105
N
P
N
106
N
O
N
107
N
O
N
108
N
O
N
109
N
C
N
110
R
C
N
111
N
O
N
112
S
C
N
113
N
O
N
114
N
C
N
115
R
C
Y
116
N
N
Y
117
N
C
Y
118
N
N
Y
119
N
C
N
120
N
C
N
121
N
O
N
122
N
N
N
123
N
C
N
124
N
N
N
125
N
N
Y
126
N
C
N
127
N
H
N
128
N
H
N
129
N
H
N
130
N
H
N
131
N
H
N
132
N
H
N
133
N
H
N
134
N
H
N
135
N
H
N
136
N
H
N
137
N
H
N
138
N
H
N
139
N
H
N
140
N
H
N
141
N
O
N
142
N
H
N
143
N
H
N
144
N
MG
N
145
N
NA
N
146
N
N
N
147
N
C
N
148
N
C
N
149
N
C
N
150
N
N
N
151
N
C
N
152
N
C
N
153
N
C
N
154
N
C
N
155
N
N
N
156
N
C
N
157
N
C
N
158
N
C
N
159
N
N
N
160
N
H
N
161
N
H
N
162
N
H
N
163
N
H
N
164
N
H
N
165
N
H
N
166
N
H
N
167
N
H
N
168
N
H
N
169
N
H
N
170
N
H
N
171
N
H
N
172
N
H
N
173
N
H
N
174
N
H
N
175
N
H
N
176
N
H
N
177
N
H
N
178
N
H
N
179
N
H
N
180
N
H
N
181
N
H
N
182
N
H
N
183
N
H
N
184
N
H
N
185
N
H
N
1
N
sing
N
2
N
sing
N
3
N
sing
N
4
N
sing
N
5
N
doub
N
6
N
sing
N
7
N
sing
N
8
N
sing
N
9
N
doub
N
10
N
doub
N
11
N
sing
N
12
N
sing
N
13
N
sing
N
14
N
sing
N
15
N
sing
N
16
N
sing
N
17
N
sing
N
18
N
sing
N
19
N
sing
N
20
N
sing
N
21
N
sing
N
22
N
sing
N
23
N
sing
N
24
N
sing
N
25
N
sing
N
26
N
sing
N
27
N
sing
N
28
N
sing
N
29
N
sing
N
30
N
doub
N
31
N
sing
N
32
N
sing
N
33
N
sing
N
34
N
sing
N
35
N
sing
N
36
N
sing
N
37
N
doub
N
38
N
sing
N
39
N
sing
N
40
N
sing
N
41
N
sing
N
42
N
sing
N
43
N
sing
N
44
N
sing
N
45
N
sing
N
46
N
sing
N
47
N
sing
N
48
N
sing
N
49
N
sing
N
50
N
sing
N
51
N
sing
N
52
N
sing
N
53
N
sing
N
54
N
sing
N
55
N
sing
N
56
N
sing
N
57
N
sing
Y
58
N
sing
Y
59
N
sing
Y
60
N
doub
N
61
N
sing
Y
62
N
sing
Y
63
N
sing
Y
64
N
doub
N
65
N
sing
Y
66
N
doub
N
67
N
sing
N
68
N
sing
Y
69
N
sing
Y
70
N
doub
N
71
N
sing
Y
72
N
sing
N
73
N
sing
N
74
N
sing
N
75
N
doub
N
76
N
sing
N
77
N
sing
N
78
N
sing
N
79
N
sing
N
80
N
sing
N
81
N
sing
N
82
N
sing
N
83
N
sing
N
84
N
sing
N
85
N
sing
N
86
N
sing
N
87
N
sing
N
88
N
sing
N
89
N
sing
N
90
N
sing
N
91
N
sing
N
92
N
sing
N
93
N
sing
N
94
N
sing
N
95
N
sing
N
96
N
sing
N
97
N
sing
N
98
N
doub
N
99
N
sing
N
100
N
doub
N
101
N
sing
N
102
N
sing
N
103
N
sing
N
104
N
sing
N
105
N
doub
N
106
N
sing
N
107
N
sing
N
108
N
sing
N
109
N
sing
N
110
N
doub
N
111
N
sing
N
112
N
sing
N
113
N
sing
N
114
N
sing
N
115
N
sing
N
116
N
sing
N
117
N
sing
N
118
N
sing
N
119
N
sing
N
120
N
sing
N
121
N
sing
N
122
N
sing
N
123
N
sing
N
124
N
sing
N
125
N
sing
N
126
N
sing
N
127
N
sing
N
128
N
sing
N
129
N
sing
N
130
N
sing
Y
131
N
sing
Y
132
N
sing
Y
133
N
doub
N
134
N
sing
Y
135
N
sing
N
136
N
sing
Y
137
N
doub
N
138
N
doub
N
139
N
sing
N
140
N
sing
N
141
N
sing
N
142
N
sing
N
143
N
doub
N
144
N
sing
N
145
N
sing
N
146
N
sing
N
147
N
sing
N
148
N
sing
N
149
N
sing
N
150
N
sing
N
151
N
sing
N
152
N
sing
N
153
N
sing
N
154
N
sing
N
155
N
sing
N
156
N
sing
N
157
N
sing
N
158
N
sing
N
159
N
sing
N
160
N
sing
N
161
N
sing
N
162
N
sing
N
163
N
sing
N
164
N
sing
N
165
N
sing
N
166
N
sing
N
167
N
sing
N
168
N
sing
N
169
N
sing
N
170
N
sing
N
171
N
sing
N
172
N
sing
N
173
N
sing
N
174
N
sing
N
175
N
sing
N
176
N
sing
N
177
N
sing
N
178
N
sing
N
179
N
sing
N
180
N
sing
N
181
N
sing
N
182
N
sing
N
183
N
sing
N
184
N
sing
N
185
N
sing
N
186
N
sing
N
187
N
sing
US
Biochemistry
BICHAW
0033
0006-2960
38
16452
16460
10.1021/bi9914614
10600106
Structure and recognition of sheared tandem G x A base pairs associated with human centromere DNA sequence at atomic resolution.
1999
10.2210/pdb1dcr/pdb
pdb_00001dcr
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
298
1
IMAGE PLATE
1996-06-17
RIGAKU RAXIS IIC
SINGLE WAVELENGTH
M
x-ray
1
1.5418
1.0
1.5418
ROTATING ANODE
RIGAKU RU200
3158.913
5'-D(*CP*CP*GP*AP*AP*(BRU)P*GP*AP*GP*G)-3'
2
syn
polymer
202.340
SPERMINE
1
syn
non-polymer
24.305
MAGNESIUM ION
3
syn
non-polymer
22.990
SODIUM ION
1
syn
non-polymer
18.015
water
87
nat
water
no
yes
(DC)(DC)(DG)(DA)(DA)(BRU)(DG)(DA)(DG)(DG)
CCGAAUGAGG
A,B
polydeoxyribonucleotide
n
n
n
n
n
n
n
n
n
n
1
1.76
29.96
VAPOR DIFFUSION, SITTING DROP
7.5
MPD, MGCL2, TRIS, SPERMINE, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K
298
SPERMINE
1
MGCL2
1
TRIS
1
MPD
1
MPD
2
-3.185
1
19
A
2
B
19
-3.243
A_DC2:DG19_B
1
2.432
0.162
-0.101
-0.107
32.112
9
11
A
3
B
18
-3.230
A_DG3:DA18_B
2
4.379
6.718
0.530
-4.499
-34.108
9
11
A
4
B
17
4.071
A_DA4:DG17_B
3
-7.028
-6.564
0.543
-4.428
-1.458
1
20
A
5
B
16
0.694
A_DA5:BRU16_B
4
8.583
0.043
-0.209
-0.058
3.541
1
20
A
6
B
15
-1.053
A_BRU6:DA15_B
5
5.731
0.115
0.002
-0.066
40.713
9
11
A
7
B
14
6.863
A_DG7:DA14_B
6
-7.007
6.552
1.122
-4.081
-37.797
9
11
A
8
B
13
5.816
A_DA8:DG13_B
7
1.738
-6.531
0.760
-4.146
-2.291
1
19
A
9
B
12
-5.970
A_DG9:DC12_B
8
6.023
-0.235
-0.193
-0.200
-0.916
1
19
A
10
B
11
-5.662
A_DG10:DC11_B
9
-6.397
-0.078
0.092
-0.249
3.004
62.400
A
A
2
3
2.418
B
B
19
18
2.959
2.504
0.388
1.687
AA_DC2DG3:DA18DG19_BB
1
-2.238
2.161
62.319
1.524
-0.467
4.243
-8.233
A
A
3
4
9.664
B
B
18
17
4.946
-1.316
0.440
-1.071
AA_DG3DA4:DG17DA18_BB
2
-4.174
-30.650
-6.975
12.993
-14.479
3.149
66.343
A
A
4
5
4.417
B
B
17
16
3.031
4.830
-0.682
2.105
AA_DA4DA5:BRU16DG17_BB
3
1.175
-1.075
66.177
1.742
0.668
3.443
26.199
A
A
5
6
-0.652
B
B
16
15
3.449
-0.295
0.169
-0.531
AA_DA5BRU6:DA15BRU16_BB
4
-1.189
2.625
26.171
-1.088
-0.711
3.119
65.798
A
A
6
7
5.703
B
B
15
14
2.991
6.187
0.731
1.920
AA_BRU6DG7:DA14DA15_BB
5
-2.157
1.988
65.508
1.532
-0.755
2.190
-8.795
A
A
7
8
47.759
B
B
14
13
5.275
-6.241
-0.211
-1.274
AA_DG7DA8:DG13DA14_BB
6
3.654
27.959
-5.008
30.297
11.496
3.043
59.161
A
A
8
9
6.061
B
B
13
12
2.878
5.975
-0.163
1.962
AA_DA8DG9:DC12DG13_BB
7
1.156
-1.173
58.876
1.710
0.218
3.515
38.452
A
A
9
10
10.971
B
B
12
11
3.506
7.162
-0.752
-0.021
AA_DG9DG10:DC11DC12_BB
8
-5.621
8.611
37.398
-1.002
0.381
software
chem_comp_atom
chem_comp_bond
database_2
pdbx_initial_refinement_model
pdbx_struct_conn_angle
struct_conn
struct_conn_type
struct_site
repository
Initial release
Version format compliance
Version format compliance
Refinement description
Data collection
Database references
Derived calculations
Refinement description
1
0
1999-11-19
1
1
2008-04-27
1
2
2011-07-13
1
3
2017-10-04
1
4
2023-08-09
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_struct_conn.conn_type_id
_struct_conn.id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn_type.id
_struct_site.pdbx_auth_asym_id
_struct_site.pdbx_auth_comp_id
_struct_site.pdbx_auth_seq_id
RCSB
Y
RCSB
1999-11-05
REL
REL
SPM
SPERMINE
MG
MAGNESIUM ION
NA
SODIUM ION
HOH
water
1D9R
PDB STRUCTURE 1D9R
PDB
experimental model
SPM
24
2
SPM
SPM
24
A
MO5
21
3
MG
MG
21
A
MO5
22
3
MG
MG
22
A
NA
25
4
NA
NA
25
B
MO4
23
3
MG
MG
23
B
HOH
1004
5
HOH
HOH
1004
A
HOH
1005
5
HOH
HOH
1005
A
HOH
1006
5
HOH
HOH
1006
A
HOH
1011
5
HOH
HOH
1011
A
HOH
1012
5
HOH
HOH
1012
A
HOH
1013
5
HOH
HOH
1013
A
HOH
1015
5
HOH
HOH
1015
A
HOH
1017
5
HOH
HOH
1017
A
HOH
1018
5
HOH
HOH
1018
A
HOH
1021
5
HOH
HOH
1021
A
HOH
1023
5
HOH
HOH
1023
A
HOH
1026
5
HOH
HOH
1026
A
HOH
1030
5
HOH
HOH
1030
A
HOH
1031
5
HOH
HOH
1031
A
HOH
1034
5
HOH
HOH
1034
A
HOH
1036
5
HOH
HOH
1036
A
HOH
1037
5
HOH
HOH
1037
A
HOH
1038
5
HOH
HOH
1038
A
HOH
1041
5
HOH
HOH
1041
A
HOH
1042
5
HOH
HOH
1042
A
HOH
1045
5
HOH
HOH
1045
A
HOH
1046
5
HOH
HOH
1046
A
HOH
1048
5
HOH
HOH
1048
A
HOH
1050
5
HOH
HOH
1050
A
HOH
1051
5
HOH
HOH
1051
A
HOH
1052
5
HOH
HOH
1052
A
HOH
1054
5
HOH
HOH
1054
A
HOH
1055
5
HOH
HOH
1055
A
HOH
1058
5
HOH
HOH
1058
A
HOH
1059
5
HOH
HOH
1059
A
HOH
1060
5
HOH
HOH
1060
A
HOH
1061
5
HOH
HOH
1061
A
HOH
1063
5
HOH
HOH
1063
A
HOH
1064
5
HOH
HOH
1064
A
HOH
1065
5
HOH
HOH
1065
A
HOH
1069
5
HOH
HOH
1069
A
HOH
1072
5
HOH
HOH
1072
A
HOH
1073
5
HOH
HOH
1073
A
HOH
1074
5
HOH
HOH
1074
A
HOH
1075
5
HOH
HOH
1075
A
HOH
1076
5
HOH
HOH
1076
A
HOH
1077
5
HOH
HOH
1077
A
MO5
21
5
HOH
HOH
1078
A
MO5
21
5
HOH
HOH
1079
A
MO5
21
5
HOH
HOH
1080
A
MO5
21
5
HOH
HOH
1081
A
MO5
21
5
HOH
HOH
1082
A
MO5
22
5
HOH
HOH
1083
A
MO5
22
5
HOH
HOH
1084
A
MO5
22
5
HOH
HOH
1085
A
MO5
22
5
HOH
HOH
1086
A
MO5
22
5
HOH
HOH
1087
A
HOH
1001
5
HOH
HOH
1001
B
HOH
1003
5
HOH
HOH
1003
B
HOH
1007
5
HOH
HOH
1007
B
HOH
1008
5
HOH
HOH
1008
B
HOH
1009
5
HOH
HOH
1009
B
HOH
1010
5
HOH
HOH
1010
B
HOH
1014
5
HOH
HOH
1014
B
HOH
1016
5
HOH
HOH
1016
B
HOH
1019
5
HOH
HOH
1019
B
HOH
1020
5
HOH
HOH
1020
B
HOH
1022
5
HOH
HOH
1022
B
HOH
1024
5
HOH
HOH
1024
B
HOH
1025
5
HOH
HOH
1025
B
HOH
1027
5
HOH
HOH
1027
B
HOH
1028
5
HOH
HOH
1028
B
HOH
1032
5
HOH
HOH
1032
B
HOH
1033
5
HOH
HOH
1033
B
HOH
1039
5
HOH
HOH
1039
B
HOH
1040
5
HOH
HOH
1040
B
HOH
1043
5
HOH
HOH
1043
B
HOH
1044
5
HOH
HOH
1044
B
HOH
1047
5
HOH
HOH
1047
B
HOH
1049
5
HOH
HOH
1049
B
HOH
1053
5
HOH
HOH
1053
B
HOH
1056
5
HOH
HOH
1056
B
HOH
1062
5
HOH
HOH
1062
B
HOH
1066
5
HOH
HOH
1066
B
HOH
1067
5
HOH
HOH
1067
B
HOH
1068
5
HOH
HOH
1068
B
HOH
1070
5
HOH
HOH
1070
B
HOH
1071
5
HOH
HOH
1071
B
MO4
23
5
HOH
HOH
1088
B
MO4
23
5
HOH
HOH
1089
B
MO4
23
5
HOH
HOH
1090
B
MO4
23
5
HOH
HOH
1091
B
C
1
n
1
DC
1
A
C
2
n
2
DC
2
A
G
3
n
3
DG
3
A
A
4
n
4
DA
4
A
A
5
n
5
DA
5
A
+U
6
n
6
BRU
6
A
G
7
n
7
DG
7
A
A
8
n
8
DA
8
A
G
9
n
9
DG
9
A
G
10
n
10
DG
10
A
C
11
n
1
DC
11
B
C
12
n
2
DC
12
B
G
13
n
3
DG
13
B
A
14
n
4
DA
14
B
A
15
n
5
DA
15
B
+U
16
n
6
BRU
16
B
G
17
n
7
DG
17
B
A
18
n
8
DA
18
B
G
19
n
9
DG
19
B
G
20
n
10
DG
20
B
0.192
0.187
0.261
278
5
5409
author_defined_assembly
2
dimeric
A
DG
9
A
N7
DG
9
1_555
A
MG
22
E
MG
MG
1_555
A
HOH
1083
H
O
HOH
1_555
87.2
A
DG
9
A
N7
DG
9
1_555
A
MG
22
E
MG
MG
1_555
A
HOH
1084
H
O
HOH
1_555
94.5
A
HOH
1083
H
O
HOH
1_555
A
MG
22
E
MG
MG
1_555
A
HOH
1084
H
O
HOH
1_555
178.0
A
DG
9
A
N7
DG
9
1_555
A
MG
22
E
MG
MG
1_555
A
HOH
1085
H
O
HOH
1_555
84.6
A
HOH
1083
H
O
HOH
1_555
A
MG
22
E
MG
MG
1_555
A
HOH
1085
H
O
HOH
1_555
90.1
A
HOH
1084
H
O
HOH
1_555
A
MG
22
E
MG
MG
1_555
A
HOH
1085
H
O
HOH
1_555
90.9
A
DG
9
A
N7
DG
9
1_555
A
MG
22
E
MG
MG
1_555
A
HOH
1086
H
O
HOH
1_555
172.8
A
HOH
1083
H
O
HOH
1_555
A
MG
22
E
MG
MG
1_555
A
HOH
1086
H
O
HOH
1_555
89.7
A
HOH
1084
H
O
HOH
1_555
A
MG
22
E
MG
MG
1_555
A
HOH
1086
H
O
HOH
1_555
88.7
A
HOH
1085
H
O
HOH
1_555
A
MG
22
E
MG
MG
1_555
A
HOH
1086
H
O
HOH
1_555
88.9
A
DG
9
A
N7
DG
9
1_555
A
MG
22
E
MG
MG
1_555
A
HOH
1087
H
O
HOH
1_555
97.0
A
HOH
1083
H
O
HOH
1_555
A
MG
22
E
MG
MG
1_555
A
HOH
1087
H
O
HOH
1_555
90.4
A
HOH
1084
H
O
HOH
1_555
A
MG
22
E
MG
MG
1_555
A
HOH
1087
H
O
HOH
1_555
88.5
A
HOH
1085
H
O
HOH
1_555
A
MG
22
E
MG
MG
1_555
A
HOH
1087
H
O
HOH
1_555
178.3
A
HOH
1086
H
O
HOH
1_555
A
MG
22
E
MG
MG
1_555
A
HOH
1087
H
O
HOH
1_555
89.5
A
DG
10
A
OP1
DG
10
1_555
A
MG
21
D
MG
MG
1_555
A
HOH
1078
H
O
HOH
1_555
93.5
A
DG
10
A
OP1
DG
10
1_555
A
MG
21
D
MG
MG
1_555
A
HOH
1079
H
O
HOH
1_555
85.2
A
HOH
1078
H
O
HOH
1_555
A
MG
21
D
MG
MG
1_555
A
HOH
1079
H
O
HOH
1_555
178.4
A
DG
10
A
OP1
DG
10
1_555
A
MG
21
D
MG
MG
1_555
A
HOH
1080
H
O
HOH
1_555
91.8
A
HOH
1078
H
O
HOH
1_555
A
MG
21
D
MG
MG
1_555
A
HOH
1080
H
O
HOH
1_555
88.4
A
HOH
1079
H
O
HOH
1_555
A
MG
21
D
MG
MG
1_555
A
HOH
1080
H
O
HOH
1_555
90.6
A
DG
10
A
OP1
DG
10
1_555
A
MG
21
D
MG
MG
1_555
A
HOH
1081
H
O
HOH
1_555
175.7
A
HOH
1078
H
O
HOH
1_555
A
MG
21
D
MG
MG
1_555
A
HOH
1081
H
O
HOH
1_555
90.8
A
HOH
1079
H
O
HOH
1_555
A
MG
21
D
MG
MG
1_555
A
HOH
1081
H
O
HOH
1_555
90.6
A
HOH
1080
H
O
HOH
1_555
A
MG
21
D
MG
MG
1_555
A
HOH
1081
H
O
HOH
1_555
88.8
A
DG
10
A
OP1
DG
10
1_555
A
MG
21
D
MG
MG
1_555
A
HOH
1082
H
O
HOH
1_555
89.6
A
HOH
1078
H
O
HOH
1_555
A
MG
21
D
MG
MG
1_555
A
HOH
1082
H
O
HOH
1_555
90.9
A
HOH
1079
H
O
HOH
1_555
A
MG
21
D
MG
MG
1_555
A
HOH
1082
H
O
HOH
1_555
90.1
A
HOH
1080
H
O
HOH
1_555
A
MG
21
D
MG
MG
1_555
A
HOH
1082
H
O
HOH
1_555
178.5
A
HOH
1081
H
O
HOH
1_555
A
MG
21
D
MG
MG
1_555
A
HOH
1082
H
O
HOH
1_555
89.8
B
BRU
16
B
OP1
BRU
6
1_555
B
NA
25
F
NA
NA
1_555
B
BRU
16
B
O5'
BRU
6
1_555
35.5
B
BRU
16
B
OP1
BRU
6
1_555
B
NA
25
F
NA
NA
1_555
B
BRU
16
B
OP2
BRU
6
1_555
33.3
B
BRU
16
B
O5'
BRU
6
1_555
B
NA
25
F
NA
NA
1_555
B
BRU
16
B
OP2
BRU
6
1_555
62.1
B
BRU
16
B
OP1
BRU
6
1_555
B
NA
25
F
NA
NA
1_555
B
HOH
1014
I
O
HOH
1_555
140.1
B
BRU
16
B
O5'
BRU
6
1_555
B
NA
25
F
NA
NA
1_555
B
HOH
1014
I
O
HOH
1_555
126.9
B
BRU
16
B
OP2
BRU
6
1_555
B
NA
25
F
NA
NA
1_555
B
HOH
1014
I
O
HOH
1_555
156.8
B
DG
20
B
OP1
DG
10
1_555
B
MG
23
G
MG
MG
1_555
B
DG
20
B
OP1
DG
10
3_555
175.6
B
DG
20
B
OP1
DG
10
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1088
I
O
HOH
1_555
99.4
B
DG
20
B
OP1
DG
10
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1088
I
O
HOH
1_555
80.6
B
DG
20
B
OP1
DG
10
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1088
I
O
HOH
3_555
80.6
B
DG
20
B
OP1
DG
10
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1088
I
O
HOH
3_555
99.4
B
HOH
1088
I
O
HOH
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1088
I
O
HOH
3_555
179.6
B
DG
20
B
OP1
DG
10
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1089
I
O
HOH
1_555
80.6
B
DG
20
B
OP1
DG
10
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1089
I
O
HOH
1_555
99.4
B
HOH
1088
I
O
HOH
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1089
I
O
HOH
1_555
179.6
B
HOH
1088
I
O
HOH
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1089
I
O
HOH
1_555
0.0
B
DG
20
B
OP1
DG
10
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1089
I
O
HOH
3_555
99.4
B
DG
20
B
OP1
DG
10
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1089
I
O
HOH
3_555
80.6
B
HOH
1088
I
O
HOH
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1089
I
O
HOH
3_555
0.0
B
HOH
1088
I
O
HOH
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1089
I
O
HOH
3_555
179.6
B
HOH
1089
I
O
HOH
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1089
I
O
HOH
3_555
179.6
B
DG
20
B
OP1
DG
10
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1090
I
O
HOH
1_555
92.2
B
DG
20
B
OP1
DG
10
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1090
I
O
HOH
1_555
92.2
B
HOH
1088
I
O
HOH
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1090
I
O
HOH
1_555
90.2
B
HOH
1088
I
O
HOH
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1090
I
O
HOH
1_555
90.2
B
HOH
1089
I
O
HOH
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1090
I
O
HOH
1_555
90.2
B
HOH
1089
I
O
HOH
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1090
I
O
HOH
1_555
90.2
B
DG
20
B
OP1
DG
10
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1090
I
O
HOH
3_555
92.2
B
DG
20
B
OP1
DG
10
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1090
I
O
HOH
3_555
92.2
B
HOH
1088
I
O
HOH
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1090
I
O
HOH
3_555
90.2
B
HOH
1088
I
O
HOH
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1090
I
O
HOH
3_555
90.2
B
HOH
1089
I
O
HOH
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1090
I
O
HOH
3_555
90.2
B
HOH
1089
I
O
HOH
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1090
I
O
HOH
3_555
90.2
B
HOH
1090
I
O
HOH
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1090
I
O
HOH
3_555
0.0
B
DG
20
B
OP1
DG
10
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
1_555
87.8
B
DG
20
B
OP1
DG
10
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
1_555
87.8
B
HOH
1088
I
O
HOH
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
1_555
89.8
B
HOH
1088
I
O
HOH
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
1_555
89.8
B
HOH
1089
I
O
HOH
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
1_555
89.8
B
HOH
1089
I
O
HOH
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
1_555
89.8
B
HOH
1090
I
O
HOH
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
1_555
180.0
B
HOH
1090
I
O
HOH
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
1_555
180.0
B
DG
20
B
OP1
DG
10
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
3_555
87.8
B
DG
20
B
OP1
DG
10
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
3_555
87.8
B
HOH
1088
I
O
HOH
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
3_555
89.8
B
HOH
1088
I
O
HOH
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
3_555
89.8
B
HOH
1089
I
O
HOH
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
3_555
89.8
B
HOH
1089
I
O
HOH
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
3_555
89.8
B
HOH
1090
I
O
HOH
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
3_555
180.0
B
HOH
1090
I
O
HOH
3_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
3_555
179.9
B
HOH
1091
I
O
HOH
1_555
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
3_555
0.0
A
BRU
6
A
BRU
6
DU
B
BRU
16
B
BRU
6
DU
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
1
B
MG
23
G
MG
1
A
HOH
1042
H
HOH
1
B
HOH
1024
I
HOH
1
B
HOH
1070
I
HOH
1
B
HOH
1090
I
HOH
1
B
HOH
1091
I
HOH
1
A
DA
8
0.094
SIDE CHAIN
1
B
DC
11
0.087
SIDE CHAIN
1
B
DA
14
0.069
SIDE CHAIN
1
11.55
1.20
119.70
131.25
A
A
A
C3'
O3'
P
BRU
BRU
DG
6
6
7
Y
1
-6.91
0.90
105.70
98.79
A
A
A
O5'
P
OP2
DG
DG
DG
7
7
7
N
1
-4.44
0.70
108.00
103.56
A
A
A
O4'
C1'
N9
DG
DG
DG
7
7
7
N
1
4.54
0.30
108.30
112.84
A
A
A
O4'
C1'
N9
DG
DG
DG
9
9
9
N
1
6.38
0.30
108.30
114.68
B
B
B
O4'
C1'
N1
DC
DC
DC
11
11
11
N
1
3.98
0.30
108.30
112.28
B
B
B
O4'
C1'
N9
DA
DA
DA
14
14
14
N
1
3.05
0.50
117.70
120.75
B
B
B
C5
C6
N1
DA
DA
DA
15
15
15
N
1
-5.19
0.50
129.30
124.11
B
B
B
N1
C2
N3
DA
DA
DA
18
18
18
N
1
4.90
0.60
118.60
123.50
B
B
B
N1
C6
N6
DA
DA
DA
18
18
18
N
SHELX-97 OPTIONS HOPE
0.266
0.196
0.191
1.60
20.0
2055
291
5771
5409
1837
5
98.4
RANDOM
1
THROUGHOUT
0.0
0.0
MOLECULAR REPLACEMENT
PDB STRUCTURE 1D9R
PARKINSON ET AL.
SHELX-97 OPTIONS SWAT
1.60
20.0
77
523
34
412
0
0.009
0.025
0.067
0.072
0.066
32.7
1.60
20.0
1DCR
5771
5771
0
0
0.075
1
19.2
2.61
94.8
0.445
1.60
1.66
3.80
2.10
93.7
model building
X-PLOR
refinement
SHELXL-97
data scaling
d*TREK
phasing
X-PLOR
CRYSTAL STRUCTURE OF DNA SHEARED TANDEM G-A BASE PAIRS
1
N
N
1
N
N
2
N
N
3
N
N
3
N
N
4
N
N
3
N
N
5
N
N
5
N
N
covale
1.609
both
A
DA
5
A
O3'
DA
5
1_555
A
BRU
6
A
P
BRU
6
1_555
covale
1.576
both
A
BRU
6
A
O3'
BRU
6
1_555
A
DG
7
A
P
DG
7
1_555
covale
1.619
both
B
DA
15
B
O3'
DA
5
1_555
B
BRU
16
B
P
BRU
6
1_555
covale
1.597
both
B
BRU
16
B
O3'
BRU
6
1_555
B
DG
17
B
P
DG
7
1_555
metalc
2.307
A
DG
9
A
N7
DG
9
1_555
A
MG
22
E
MG
MG
1_555
metalc
2.117
A
DG
10
A
OP1
DG
10
1_555
A
MG
21
D
MG
MG
1_555
metalc
2.061
A
MG
21
D
MG
MG
1_555
A
HOH
1078
H
O
HOH
1_555
metalc
2.055
A
MG
21
D
MG
MG
1_555
A
HOH
1079
H
O
HOH
1_555
metalc
2.068
A
MG
21
D
MG
MG
1_555
A
HOH
1080
H
O
HOH
1_555
metalc
2.061
A
MG
21
D
MG
MG
1_555
A
HOH
1081
H
O
HOH
1_555
metalc
2.059
A
MG
21
D
MG
MG
1_555
A
HOH
1082
H
O
HOH
1_555
metalc
2.056
A
MG
22
E
MG
MG
1_555
A
HOH
1083
H
O
HOH
1_555
metalc
2.069
A
MG
22
E
MG
MG
1_555
A
HOH
1084
H
O
HOH
1_555
metalc
2.069
A
MG
22
E
MG
MG
1_555
A
HOH
1085
H
O
HOH
1_555
metalc
2.067
A
MG
22
E
MG
MG
1_555
A
HOH
1086
H
O
HOH
1_555
metalc
2.063
A
MG
22
E
MG
MG
1_555
A
HOH
1087
H
O
HOH
1_555
metalc
4.103
B
BRU
16
B
OP1
BRU
6
1_555
B
NA
25
F
NA
NA
1_555
metalc
2.542
B
BRU
16
B
O5'
BRU
6
1_555
B
NA
25
F
NA
NA
1_555
metalc
2.104
B
BRU
16
B
OP2
BRU
6
1_555
B
NA
25
F
NA
NA
1_555
metalc
2.029
B
DG
20
B
OP1
DG
10
1_555
B
MG
23
G
MG
MG
1_555
metalc
2.028
B
DG
20
B
OP1
DG
10
3_555
B
MG
23
G
MG
MG
1_555
metalc
2.056
B
MG
23
G
MG
MG
1_555
B
HOH
1088
I
O
HOH
1_555
metalc
2.057
B
MG
23
G
MG
MG
1_555
B
HOH
1088
I
O
HOH
3_555
metalc
2.057
B
MG
23
G
MG
MG
1_555
B
HOH
1089
I
O
HOH
1_555
metalc
2.056
B
MG
23
G
MG
MG
1_555
B
HOH
1089
I
O
HOH
3_555
metalc
2.062
B
MG
23
G
MG
MG
1_555
B
HOH
1090
I
O
HOH
1_555
metalc
2.062
B
MG
23
G
MG
MG
1_555
B
HOH
1090
I
O
HOH
3_555
metalc
2.062
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
1_555
metalc
2.062
B
MG
23
G
MG
MG
1_555
B
HOH
1091
I
O
HOH
3_555
metalc
2.908
B
NA
25
F
NA
NA
1_555
B
HOH
1014
I
O
HOH
1_555
hydrog
WATSON-CRICK
A
DC
2
A
N3
DC
2
1_555
B
DG
19
B
N1
DG
9
1_555
hydrog
WATSON-CRICK
A
DC
2
A
N4
DC
2
1_555
B
DG
19
B
O6
DG
9
1_555
hydrog
WATSON-CRICK
A
DC
2
A
O2
DC
2
1_555
B
DG
19
B
N2
DG
9
1_555
hydrog
TYPE_11_PAIR
A
DG
3
A
N2
DG
3
1_555
B
DA
18
B
N7
DA
8
1_555
hydrog
TYPE_11_PAIR
A
DG
3
A
N3
DG
3
1_555
B
DA
18
B
N6
DA
8
1_555
hydrog
TYPE_11_PAIR
A
DA
4
A
N6
DA
4
1_555
B
DG
17
B
N3
DG
7
1_555
hydrog
TYPE_11_PAIR
A
DA
4
A
N7
DA
4
1_555
B
DG
17
B
N2
DG
7
1_555
hydrog
WATSON-CRICK
A
DA
5
A
N1
DA
5
1_555
B
BRU
16
B
N3
BRU
6
1_555
hydrog
WATSON-CRICK
A
DA
5
A
N6
DA
5
1_555
B
BRU
16
B
O4
BRU
6
1_555
hydrog
WATSON-CRICK
A
BRU
6
A
N3
BRU
6
1_555
B
DA
15
B
N1
DA
5
1_555
hydrog
WATSON-CRICK
A
BRU
6
A
O4
BRU
6
1_555
B
DA
15
B
N6
DA
5
1_555
hydrog
TYPE_11_PAIR
A
DG
7
A
N2
DG
7
1_555
B
DA
14
B
N7
DA
4
1_555
hydrog
TYPE_11_PAIR
A
DG
7
A
N3
DG
7
1_555
B
DA
14
B
N6
DA
4
1_555
hydrog
TYPE_11_PAIR
A
DA
8
A
N6
DA
8
1_555
B
DG
13
B
N3
DG
3
1_555
hydrog
TYPE_11_PAIR
A
DA
8
A
N7
DA
8
1_555
B
DG
13
B
N2
DG
3
1_555
hydrog
WATSON-CRICK
A
DG
9
A
N1
DG
9
1_555
B
DC
12
B
N3
DC
2
1_555
hydrog
WATSON-CRICK
A
DG
9
A
N2
DG
9
1_555
B
DC
12
B
O2
DC
2
1_555
hydrog
WATSON-CRICK
A
DG
9
A
O6
DG
9
1_555
B
DC
12
B
N4
DC
2
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N1
DG
10
1_555
B
DC
11
B
N3
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
10
A
N2
DG
10
1_555
B
DC
11
B
O2
DC
1
1_555
hydrog
WATSON-CRICK
A
DG
10
A
O6
DG
10
1_555
B
DC
11
B
N4
DC
1
1_555
DNA
TANDEM GA BASE PAIRS, GA MISMATCH, DEOXYRIBONUCLEIC ACID, DNA
1DCR
PDB
1
1DCR
1
10
1DCR
1
10
1DCR
A
1
1
10
11
20
1DCR
11
20
1DCR
B
1
1
10
BINDING SITE FOR RESIDUE SPM A 24
A
SPM
24
Software
10
BINDING SITE FOR RESIDUE NA B 25
B
NA
25
Software
3
BINDING SITE FOR RESIDUE MG A 21
A
MG
21
Software
6
BINDING SITE FOR RESIDUE MG A 22
A
MG
22
Software
6
BINDING SITE FOR RESIDUE MG B 23
B
MG
23
Software
10
A
DG
7
A
DG
7
10
1_555
A
DG
7
A
DG
7
10
3_655
A
HOH
1069
H
HOH
10
1_555
A
HOH
1069
H
HOH
10
3_655
B
DC
12
B
DC
2
10
3_655
B
DC
12
B
DC
2
10
1_555
B
DG
13
B
DG
3
10
1_555
B
DG
13
B
DG
3
10
3_655
B
HOH
1056
I
HOH
10
3_655
B
HOH
1056
I
HOH
10
1_555
B
DA
15
B
DA
5
3
1_555
B
BRU
16
B
BRU
6
3
1_555
B
HOH
1014
I
HOH
3
1_555
A
DG
10
A
DG
10
6
1_555
A
HOH
1078
H
HOH
6
1_555
A
HOH
1079
H
HOH
6
1_555
A
HOH
1080
H
HOH
6
1_555
A
HOH
1081
H
HOH
6
1_555
A
HOH
1082
H
HOH
6
1_555
A
DG
9
A
DG
9
6
1_555
A
HOH
1083
H
HOH
6
1_555
A
HOH
1084
H
HOH
6
1_555
A
HOH
1085
H
HOH
6
1_555
A
HOH
1086
H
HOH
6
1_555
A
HOH
1087
H
HOH
6
1_555
B
DG
20
B
DG
10
10
1_555
B
DG
20
B
DG
10
10
3_555
B
HOH
1088
I
HOH
10
1_555
B
HOH
1088
I
HOH
10
3_555
B
HOH
1089
I
HOH
10
3_555
B
HOH
1089
I
HOH
10
1_555
B
HOH
1090
I
HOH
10
1_555
B
HOH
1090
I
HOH
10
3_555
B
HOH
1091
I
HOH
10
3_555
B
HOH
1091
I
HOH
10
1_555
20
orthorhombic
C 2 2 21