1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Reddy, D.V.
Shenoy, B.C.
Carey, P.R.
Sonnichsen, F.D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
US
Biochemistry
BICHAW
0033
0006-2960
39
2509
2516
10.1021/bi9925367
10704200
High resolution solution structure of the 1.3S subunit of transcarboxylase from Propionibacterium shermanii.
2000
US
Protein Sci.
PRCIEI
0795
0961-8368
7
2156
2163
Structural Characterization of the Entire 1.3S Subunit of Transcarboxylase from Propionibacterium shermanii
1998
US
Biochemistry
BICHAW
0033
0006-2960
36
14676
14682
10.1021/bi971674y
Absence of Observable Biotin-Protein Interactions in the 1.3S Subunit of Transcarboxylase: An NMR Study
1997
10.2210/pdb1dcz/pdb
pdb_00001dcz
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
7822.057
TRANSCARBOXYLASE 1.3S SUBUNIT
2.1.3.1
1
man
polymer
no
no
AGAGKAGEGEIPAPLAGTVSKILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKERDAVQGGQGLIKIG
AGAGKAGEGEIPAPLAGTVSKILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKERDAVQGGQGLIKIG
A
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
Propionibacterium
Propionibacterium freudenreichii
subsp. shermanii
Escherichia
sample
1752
Propionibacterium freudenreichii subsp. shermanii
562
Escherichia coli
HB101
PET20B
database_2
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
1
0
2000-05-10
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_software.name
ENSEMBLE OF 32 STRUCTURES
RCSB
Y
RCSB
1999-11-05
REL
REL
BIOTIN ATTACHED TO LYS 89 WAS OMITTED FROM COORDINATES. RESIDUES 1-46 APPEARED
UNSTRUCTURED, OMITTED FROM CALCULATIONS AND COORDINATES.
structures with acceptable covalent geometry
50
1
3D_13C-SEPARATED_NOESY
3D_15N-SEPARATED_NOESY
HNHA
4D_13C-SEPARATED_NOESY
3D_15N-SEPARATED_NOESY
0
6.7
1
atm
20
K
DG_SUB_EMBED, DGSA, REFINE WITH DIRECT J-REFINEMENT
DISTANCE GEOMETRY/SIMULATED ANNEALING HYBRID METHOD
1
minimized average structure
2 MM PROTEIN, N15/C13 LABELED TC 1.3S 1-123, BIOTIN (UNLABELED) COVALENTLY
ATTACHED TO LYS 89
2 MM PROTEIN,N15/C13 LABELED, TC 1.3S 1-123, BIOTIN (UNLABELED) COVALENTLY
ATTACHED TO LYS 89
2MM PROTEIN, N15 LABELED, TC 1.3S 1-123, BIOTIN (UNLABELED) COVALENTLY
ATTACHED TO LYS 89
DELAGLIO
processing
NMRPipe
SGI6X.M4
GARRET
data analysis
PIPP
3.7.3
BRUNGER
structure solution
X-PLOR
3.81
BRUNGER
refinement
X-PLOR
3.81
600
Varian
INOVA
500
Varian
INOVA
ALA
47
n
1
ALA
47
A
GLY
48
n
2
GLY
48
A
ALA
49
n
3
ALA
49
A
GLY
50
n
4
GLY
50
A
LYS
51
n
5
LYS
51
A
ALA
52
n
6
ALA
52
A
GLY
53
n
7
GLY
53
A
GLU
54
n
8
GLU
54
A
GLY
55
n
9
GLY
55
A
GLU
56
n
10
GLU
56
A
ILE
57
n
11
ILE
57
A
PRO
58
n
12
PRO
58
A
ALA
59
n
13
ALA
59
A
PRO
60
n
14
PRO
60
A
LEU
61
n
15
LEU
61
A
ALA
62
n
16
ALA
62
A
GLY
63
n
17
GLY
63
A
THR
64
n
18
THR
64
A
VAL
65
n
19
VAL
65
A
SER
66
n
20
SER
66
A
LYS
67
n
21
LYS
67
A
ILE
68
n
22
ILE
68
A
LEU
69
n
23
LEU
69
A
VAL
70
n
24
VAL
70
A
LYS
71
n
25
LYS
71
A
GLU
72
n
26
GLU
72
A
GLY
73
n
27
GLY
73
A
ASP
74
n
28
ASP
74
A
THR
75
n
29
THR
75
A
VAL
76
n
30
VAL
76
A
LYS
77
n
31
LYS
77
A
ALA
78
n
32
ALA
78
A
GLY
79
n
33
GLY
79
A
GLN
80
n
34
GLN
80
A
THR
81
n
35
THR
81
A
VAL
82
n
36
VAL
82
A
LEU
83
n
37
LEU
83
A
VAL
84
n
38
VAL
84
A
LEU
85
n
39
LEU
85
A
GLU
86
n
40
GLU
86
A
ALA
87
n
41
ALA
87
A
MET
88
n
42
MET
88
A
LYS
89
n
43
LYS
89
A
MET
90
n
44
MET
90
A
GLU
91
n
45
GLU
91
A
THR
92
n
46
THR
92
A
GLU
93
n
47
GLU
93
A
ILE
94
n
48
ILE
94
A
ASN
95
n
49
ASN
95
A
ALA
96
n
50
ALA
96
A
PRO
97
n
51
PRO
97
A
THR
98
n
52
THR
98
A
ASP
99
n
53
ASP
99
A
GLY
100
n
54
GLY
100
A
LYS
101
n
55
LYS
101
A
VAL
102
n
56
VAL
102
A
GLU
103
n
57
GLU
103
A
LYS
104
n
58
LYS
104
A
VAL
105
n
59
VAL
105
A
LEU
106
n
60
LEU
106
A
VAL
107
n
61
VAL
107
A
LYS
108
n
62
LYS
108
A
GLU
109
n
63
GLU
109
A
ARG
110
n
64
ARG
110
A
ASP
111
n
65
ASP
111
A
ALA
112
n
66
ALA
112
A
VAL
113
n
67
VAL
113
A
GLN
114
n
68
GLN
114
A
GLY
115
n
69
GLY
115
A
GLY
116
n
70
GLY
116
A
GLN
117
n
71
GLN
117
A
GLY
118
n
72
GLY
118
A
LEU
119
n
73
LEU
119
A
ILE
120
n
74
ILE
120
A
LYS
121
n
75
LYS
121
A
ILE
122
n
76
ILE
122
A
GLY
123
n
77
GLY
123
A
author_defined_assembly
1
monomeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
O
ILE
57
A
O
ILE
11
A
N
LEU
119
A
N
LEU
73
A
O
LYS
121
A
O
LYS
75
A
N
GLU
103
A
N
GLU
57
A
O
GLY
100
A
O
GLY
54
A
N
VAL
76
A
N
VAL
30
A
O
LYS
67
A
O
LYS
21
A
N
VAL
84
A
N
VAL
38
A
N
ALA
87
A
N
ALA
41
A
O
MET
90
A
O
MET
44
1
A
ARG
110
0.260
SIDE CHAIN
1
A
GLU
72
-59.32
101.93
1
A
ALA
78
-60.18
98.35
minimized average
BIOTIN CARBOXYL CARRIER DOMAIN OF TRANSCARBOXYLASE (TC 1.3S)
1
N
N
TRANSFERASE
ANTIPARALLEL BETA SHEET, HAMMERHEAD, BIOCYTIN, TRANSFERASE
BCCP_PROFR
UNP
1
P02904
47
123
1DCZ
47
123
P02904
A
1
1
77
4
3
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
GLU
56
A
GLU
10
A
PRO
58
A
PRO
12
A
GLY
118
A
GLY
72
A
ILE
122
A
ILE
76
A
GLY
100
A
GLY
54
A
VAL
105
A
VAL
59
A
THR
75
A
THR
29
A
VAL
76
A
VAL
30
A
THR
64
A
THR
18
A
ILE
68
A
ILE
22
A
THR
81
A
THR
35
A
ALA
87
A
ALA
41
A
MET
90
A
MET
44
A
ASN
95
A
ASN
49
1
P 1