1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
Zwahlen, C.
Li, S.C.
Kay, L.E.
Pawson, T.
Forman-Kay, J.D.
http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
1
90.00
90.00
90.00
1.000
1.000
1.000
C3 H7 N O2
89.093
y
ALANINE
L-peptide linking
C6 H15 N4 O2 1
175.209
y
ARGININE
L-peptide linking
C4 H8 N2 O3
132.118
y
ASPARAGINE
L-peptide linking
C4 H7 N O4
133.103
y
ASPARTIC ACID
L-peptide linking
C3 H7 N O2 S
121.158
y
CYSTEINE
L-peptide linking
C5 H10 N2 O3
146.144
y
GLUTAMINE
L-peptide linking
C5 H9 N O4
147.129
y
GLUTAMIC ACID
L-peptide linking
C2 H5 N O2
75.067
y
GLYCINE
peptide linking
C6 H10 N3 O2 1
156.162
y
HISTIDINE
L-peptide linking
C6 H13 N O2
131.173
y
ISOLEUCINE
L-peptide linking
C6 H13 N O2
131.173
y
LEUCINE
L-peptide linking
C6 H15 N2 O2 1
147.195
y
LYSINE
L-peptide linking
C5 H11 N O2 S
149.211
y
METHIONINE
L-peptide linking
C9 H11 N O2
165.189
y
PHENYLALANINE
L-peptide linking
C5 H9 N O2
115.130
y
PROLINE
L-peptide linking
C3 H7 N O3
105.093
y
SERINE
L-peptide linking
C4 H9 N O3
119.119
y
THREONINE
L-peptide linking
C11 H12 N2 O2
204.225
y
TRYPTOPHAN
L-peptide linking
C9 H11 N O3
181.189
y
TYROSINE
L-peptide linking
C5 H11 N O2
117.146
y
VALINE
L-peptide linking
UK
EMBO J.
EMJODG
0897
0261-4189
19
1505
1515
10.1093/emboj/19.7.1505
10747019
Multiple modes of peptide recognition by the PTB domain of the cell fate determinant Numb.
2000
US
Nat.Struct.Biol.
NSBIEW
2024
1072-8368
5
1075
1083
10.1038/4185
Structure of a Numb PTB Domain-Peptide Complex Suggests a Basis for Diverse Binding Specificity
1998
10.2210/pdb1ddm/pdb
pdb_00001ddm
1.000000
0.000000
0.000000
0.000000
1.000000
0.000000
0.000000
0.000000
1.000000
0.00000
0.00000
0.00000
CELL FATE DETERMINANT PROTEIN
15277.424
NUMB PROTEIN
PHOSPHOTYROSINE BINDING DOMAIN (PTB)
1
man
polymer
1277.359
NUMB ASSOCIATE KINASE
2.7.1.37
C-TERMINAL NAK 1437-1447
1
nat
polymer
NAK
no
no
HQWQADEEAVRSATCSFSVKYLGCVEVFESRGMQVCEEALKVLRQSRRRPVRGLLHVSGDGLRVVDDETKGLIVDQTIEK
VSFCAPDRNHERGFSYICRDGTTRRWMCHGFLACKDSGERLSHAVGCAFAVCLER
HQWQADEEAVRSATCSFSVKYLGCVEVFESRGMQVCEEALKVLRQSRRRPVRGLLHVSGDGLRVVDDETKGLIVDQTIEK
VSFCAPDRNHERGFSYICRDGTTRRWMCHGFLACKDSGERLSHAVGCAFAVCLER
A
polypeptide(L)
no
no
GFSNMSFEDFP
GFSNMSFEDFP
B
polypeptide(L)
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
n
fruit fly
Drosophila
Escherichia
sample
7227
Drosophila melanogaster
562
Escherichia coli
PGEX4T2
fruit fly
Drosophila
sample
7227
Drosophila melanogaster
database_2
pdbx_nmr_exptl_sample_conditions
pdbx_nmr_software
pdbx_struct_assembly
pdbx_struct_oper_list
repository
Initial release
Version format compliance
Version format compliance
Data collection
Database references
Derived calculations
Experimental preparation
1
0
2000-04-10
1
1
2008-04-27
1
2
2011-07-13
1
3
2022-02-16
_database_2.pdbx_DOI
_database_2.pdbx_database_accession
_pdbx_nmr_exptl_sample_conditions.pressure_units
_pdbx_nmr_software.name
2NMB CONTAINS THE SAME PROTEIN COMPLEXED WITH THE GPPY PEPTIDE
RCSB
Y
RCSB
1999-11-11
REL
THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY.
STRUCTURES WITH THE LEAST RESTRAINT VIOLATIONS,STRUCTURES WITH THE LOWEST ENERGY
150
20
3D_15N-SEPARATED_NOESY
2D_13C-HSQC
3D_15N/13C-SEPARATED_NOESY
HNCO/CBCACONNH/HAHBCBCACONNH/HNCACB/CCCTOCSYCONNH/HCCTOCSYCONNH/HCCHTOCSY/HALF- FILTER-NOESY
2D TOCSY
50mM
6.00
1
atm
303
K
THE STRUCTURES ARE BASED ON A TOTAL OF 2088 NOE, 50 DISTANCE RETRAINTS FORM HYDROGEN BONDS, 94 CHEMICAL SHIFT-DERIVED DIHEDRAL RESTRAINTS
TORSION ANGLE DYNAMICS USING ARIA PROTOCOLS FOR AMBIGUOUS RESTRAINTS
1
lowest energy
1MM PTB U-15N; 1MM NAK NA; 50MM PHOSPHATE BUFFER NA
1MM PTB U-15N, 10% 13C; 1MM NAK NA; 50MM PHOSPHATE BUFFER NA
1MM PTB U-15N, U-13C; 1MM NAK NA; 50MM PHOSPHATE BUFFER NA
1MM PTB NA; 1MM NAK (G1 F2 F7 F10) 15N, 13C;; 50MM PHOSPHATE BUFFER NA
VARIAN INC.
collection
VNMR
4
F. DELAGLIO
processing
NMRPipe
1.7
B. A. JOHNSON
data analysis
NMRView
3.1
BRUNGER
refinement
CNS
0.3
BRUNGER
structure solution
CNS
0.3
500
Varian
UNITYPLUS
600
Varian
UNITYPLUS
HIS
67
n
1
HIS
67
A
GLN
68
n
2
GLN
68
A
TRP
69
n
3
TRP
69
A
GLN
70
n
4
GLN
70
A
ALA
71
n
5
ALA
71
A
ASP
72
n
6
ASP
72
A
GLU
73
n
7
GLU
73
A
GLU
74
n
8
GLU
74
A
ALA
75
n
9
ALA
75
A
VAL
76
n
10
VAL
76
A
ARG
77
n
11
ARG
77
A
SER
78
n
12
SER
78
A
ALA
79
n
13
ALA
79
A
THR
80
n
14
THR
80
A
CYS
81
n
15
CYS
81
A
SER
82
n
16
SER
82
A
PHE
83
n
17
PHE
83
A
SER
84
n
18
SER
84
A
VAL
85
n
19
VAL
85
A
LYS
86
n
20
LYS
86
A
TYR
87
n
21
TYR
87
A
LEU
88
n
22
LEU
88
A
GLY
89
n
23
GLY
89
A
CYS
90
n
24
CYS
90
A
VAL
91
n
25
VAL
91
A
GLU
92
n
26
GLU
92
A
VAL
93
n
27
VAL
93
A
PHE
94
n
28
PHE
94
A
GLU
95
n
29
GLU
95
A
SER
96
n
30
SER
96
A
ARG
97
n
31
ARG
97
A
GLY
98
n
32
GLY
98
A
MET
99
n
33
MET
99
A
GLN
100
n
34
GLN
100
A
VAL
101
n
35
VAL
101
A
CYS
102
n
36
CYS
102
A
GLU
103
n
37
GLU
103
A
GLU
104
n
38
GLU
104
A
ALA
105
n
39
ALA
105
A
LEU
106
n
40
LEU
106
A
LYS
107
n
41
LYS
107
A
VAL
108
n
42
VAL
108
A
LEU
109
n
43
LEU
109
A
ARG
110
n
44
ARG
110
A
GLN
111
n
45
GLN
111
A
SER
112
n
46
SER
112
A
ARG
113
n
47
ARG
113
A
ARG
114
n
48
ARG
114
A
ARG
115
n
49
ARG
115
A
PRO
116
n
50
PRO
116
A
VAL
117
n
51
VAL
117
A
ARG
118
n
52
ARG
118
A
GLY
119
n
53
GLY
119
A
LEU
120
n
54
LEU
120
A
LEU
121
n
55
LEU
121
A
HIS
122
n
56
HIS
122
A
VAL
123
n
57
VAL
123
A
SER
124
n
58
SER
124
A
GLY
125
n
59
GLY
125
A
ASP
126
n
60
ASP
126
A
GLY
127
n
61
GLY
127
A
LEU
128
n
62
LEU
128
A
ARG
129
n
63
ARG
129
A
VAL
130
n
64
VAL
130
A
VAL
131
n
65
VAL
131
A
ASP
132
n
66
ASP
132
A
ASP
133
n
67
ASP
133
A
GLU
134
n
68
GLU
134
A
THR
135
n
69
THR
135
A
LYS
136
n
70
LYS
136
A
GLY
137
n
71
GLY
137
A
LEU
138
n
72
LEU
138
A
ILE
139
n
73
ILE
139
A
VAL
140
n
74
VAL
140
A
ASP
141
n
75
ASP
141
A
GLN
142
n
76
GLN
142
A
THR
143
n
77
THR
143
A
ILE
144
n
78
ILE
144
A
GLU
145
n
79
GLU
145
A
LYS
146
n
80
LYS
146
A
VAL
147
n
81
VAL
147
A
SER
148
n
82
SER
148
A
PHE
149
n
83
PHE
149
A
CYS
150
n
84
CYS
150
A
ALA
151
n
85
ALA
151
A
PRO
152
n
86
PRO
152
A
ASP
153
n
87
ASP
153
A
ARG
154
n
88
ARG
154
A
ASN
155
n
89
ASN
155
A
HIS
156
n
90
HIS
156
A
GLU
157
n
91
GLU
157
A
ARG
158
n
92
ARG
158
A
GLY
159
n
93
GLY
159
A
PHE
160
n
94
PHE
160
A
SER
161
n
95
SER
161
A
TYR
162
n
96
TYR
162
A
ILE
163
n
97
ILE
163
A
CYS
164
n
98
CYS
164
A
ARG
165
n
99
ARG
165
A
ASP
166
n
100
ASP
166
A
GLY
167
n
101
GLY
167
A
THR
168
n
102
THR
168
A
THR
169
n
103
THR
169
A
ARG
170
n
104
ARG
170
A
ARG
171
n
105
ARG
171
A
TRP
172
n
106
TRP
172
A
MET
173
n
107
MET
173
A
CYS
174
n
108
CYS
174
A
HIS
175
n
109
HIS
175
A
GLY
176
n
110
GLY
176
A
PHE
177
n
111
PHE
177
A
LEU
178
n
112
LEU
178
A
ALA
179
n
113
ALA
179
A
CYS
180
n
114
CYS
180
A
LYS
181
n
115
LYS
181
A
ASP
182
n
116
ASP
182
A
SER
183
n
117
SER
183
A
GLY
184
n
118
GLY
184
A
GLU
185
n
119
GLU
185
A
ARG
186
n
120
ARG
186
A
LEU
187
n
121
LEU
187
A
SER
188
n
122
SER
188
A
HIS
189
n
123
HIS
189
A
ALA
190
n
124
ALA
190
A
VAL
191
n
125
VAL
191
A
GLY
192
n
126
GLY
192
A
CYS
193
n
127
CYS
193
A
ALA
194
n
128
ALA
194
A
PHE
195
n
129
PHE
195
A
ALA
196
n
130
ALA
196
A
VAL
197
n
131
VAL
197
A
CYS
198
n
132
CYS
198
A
LEU
199
n
133
LEU
199
A
GLU
200
n
134
GLU
200
A
ARG
201
n
135
ARG
201
A
GLY
1
n
1
GLY
1
B
PHE
2
n
2
PHE
2
B
SER
3
n
3
SER
3
B
ASN
4
n
4
ASN
4
B
MET
5
n
5
MET
5
B
SER
6
n
6
SER
6
B
PHE
7
n
7
PHE
7
B
GLU
8
n
8
GLU
8
B
ASP
9
n
9
ASP
9
B
PHE
10
n
10
PHE
10
B
PRO
11
n
11
PRO
11
B
author_defined_assembly
2
dimeric
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
0.0000000000
0.0000000000
0.0000000000
1.0000000000
1_555
x,y,z
identity operation
0.0000000000
0.0000000000
0.0000000000
A
N
VAL
85
A
N
VAL
19
A
O
GLY
119
A
O
GLY
53
A
O
LEU
120
A
O
LEU
54
A
N
VAL
131
A
N
VAL
65
A
N
VAL
91
A
N
VAL
25
A
O
CYS
174
A
O
CYS
108
A
N
PHE
177
A
N
PHE
111
A
O
PHE
160
A
O
PHE
94
A
N
ILE
163
A
N
ILE
97
A
O
PHE
149
A
O
PHE
83
1
A
SER
78
-85.66
-92.36
1
A
ALA
79
-175.94
34.14
1
A
THR
80
-174.41
97.22
1
A
SER
82
-113.15
-153.38
1
A
TYR
87
-58.30
101.53
1
A
GLU
95
-168.95
-68.81
1
A
ARG
97
-146.91
25.96
1
A
SER
112
-177.73
-169.14
1
A
ARG
113
69.87
-71.95
1
A
VAL
123
-62.80
94.45
1
A
THR
135
-148.89
-26.46
1
A
LEU
138
66.26
149.52
1
A
ILE
139
-138.49
-35.91
1
A
GLN
142
-76.65
-164.82
1
A
PHE
149
-174.33
141.51
1
A
ALA
151
-170.09
124.54
1
A
PRO
152
-82.10
-158.98
1
A
HIS
156
-154.46
14.54
1
A
ARG
165
-72.44
-153.14
1
A
ASP
166
-58.52
-178.23
1
A
THR
168
-171.97
-9.10
1
A
ARG
170
59.09
16.91
1
A
ASP
182
56.98
81.19
1
A
SER
183
-159.89
-33.52
1
A
GLU
185
-151.47
-32.24
1
A
LEU
187
-135.29
-43.93
1
A
SER
188
-57.22
-75.61
1
B
ASP
9
59.26
81.75
2
A
SER
78
-77.09
-92.44
2
A
ALA
79
179.54
35.72
2
A
THR
80
-173.03
100.81
2
A
CYS
81
-124.29
-149.45
2
A
SER
82
53.74
-153.33
2
A
TYR
87
-58.31
107.68
2
A
PHE
94
-102.14
64.96
2
A
GLU
95
-147.89
-81.81
2
A
SER
112
-109.70
-163.05
2
A
VAL
123
-60.82
95.45
2
A
THR
135
-141.83
-21.36
2
A
LEU
138
-169.78
119.41
2
A
GLN
142
-73.29
-166.63
2
A
ALA
151
-169.30
101.20
2
A
PRO
152
-68.41
-90.37
2
A
ASP
153
-173.49
-164.03
2
A
ARG
154
-80.73
-83.64
2
A
ASN
155
-176.00
48.17
2
A
HIS
156
-169.27
-17.46
2
A
ARG
158
58.99
15.16
2
A
ARG
165
-88.73
-151.22
2
A
ASP
166
-65.70
-149.51
2
A
THR
168
-163.03
-42.11
2
A
PHE
177
-170.78
132.93
2
A
ASP
182
56.05
84.32
2
A
SER
183
-169.24
-38.42
2
B
ASP
9
56.04
78.15
3
A
GLN
68
-162.89
-69.47
3
A
ALA
79
70.58
46.89
3
A
THR
80
-172.57
87.04
3
A
CYS
81
-119.70
-149.19
3
A
SER
82
57.64
-154.85
3
A
TYR
87
-56.83
108.15
3
A
GLU
95
-171.54
-63.78
3
A
ARG
97
-165.39
88.12
3
A
ASP
126
-150.32
14.69
3
A
PRO
152
-75.45
-89.58
3
A
ASN
155
-100.60
-85.94
3
A
HIS
156
170.39
20.37
3
A
ASP
166
44.64
-161.18
3
A
THR
168
-176.06
-19.33
3
A
ASP
182
55.38
83.07
3
A
SER
183
-169.66
-37.11
3
B
ASP
9
56.03
75.99
4
A
GLN
68
-152.41
-67.62
4
A
SER
78
-80.70
-92.02
4
A
ALA
79
-178.71
33.72
4
A
THR
80
-172.44
98.08
4
A
SER
82
-161.01
-156.54
4
A
PHE
94
-141.30
59.73
4
A
GLU
95
-162.08
-63.17
4
A
MET
99
-146.25
-33.31
4
A
SER
112
-171.91
-175.67
4
A
ARG
113
70.08
-71.55
4
A
ARG
118
-65.17
97.98
4
A
VAL
123
-66.15
94.67
4
A
ARG
129
-167.24
110.67
4
A
PRO
152
-86.60
-118.00
4
A
ASP
153
-148.68
-3.99
4
A
ARG
154
45.42
23.54
4
A
ARG
165
-127.65
-149.37
4
A
ASP
166
-63.57
-163.72
4
A
THR
168
-163.96
-5.58
4
A
LEU
187
-127.32
-55.99
4
B
SER
3
177.39
140.00
4
B
MET
5
-144.55
-17.09
4
B
ASP
9
58.86
95.87
5
A
SER
78
-80.48
-90.84
5
A
ALA
79
-176.58
34.70
5
A
THR
80
-176.80
102.82
5
A
SER
82
-163.27
-160.98
5
A
TYR
87
-63.71
91.82
5
A
VAL
93
-119.90
-169.68
5
A
GLU
95
63.80
109.22
5
A
MET
99
-170.18
-50.32
5
A
VAL
123
-62.39
98.72
5
A
ASP
126
-146.97
27.99
5
A
ASP
141
-105.86
59.38
5
A
GLN
142
-114.17
-169.62
5
A
PHE
149
-173.22
135.80
5
A
PRO
152
-54.76
-83.65
5
A
HIS
156
-178.15
-73.51
5
A
GLU
157
58.43
14.49
5
A
ASP
166
44.19
-158.31
5
A
THR
168
179.76
-17.35
5
A
ARG
171
-174.53
-171.44
5
A
ASP
182
54.80
71.82
5
A
SER
183
-155.17
-30.77
5
A
GLU
185
-139.52
-30.07
5
A
LEU
187
-135.96
-58.22
5
B
SER
3
62.87
118.60
5
B
ASP
9
57.45
78.27
6
A
SER
78
-71.74
-90.81
6
A
ALA
79
176.91
38.27
6
A
THR
80
-174.23
102.34
6
A
CYS
81
-142.17
56.81
6
A
SER
82
-151.75
-151.34
6
A
PHE
94
-148.64
59.66
6
A
GLU
95
-170.22
-61.83
6
A
ARG
97
-163.38
114.47
6
A
MET
99
-147.58
-19.18
6
A
VAL
123
-60.80
97.64
6
A
ASP
126
-162.07
13.52
6
A
GLN
142
-68.43
-170.68
6
A
ALA
151
-176.12
126.06
6
A
PRO
152
-85.09
-90.58
6
A
ASP
153
-174.17
-173.75
6
A
ARG
154
-74.66
-85.76
6
A
ASN
155
-179.65
47.84
6
A
HIS
156
-144.89
-33.19
6
A
ARG
158
59.03
18.25
6
A
ASP
166
50.45
-153.69
6
A
THR
168
-153.26
5.47
6
A
ARG
171
172.19
176.40
6
A
ASP
182
55.08
82.93
6
A
SER
183
-161.33
-37.88
6
A
LEU
187
-124.39
-51.04
7
A
SER
78
-74.30
-91.37
7
A
ALA
79
-178.36
36.63
7
A
THR
80
-176.00
101.71
7
A
LYS
86
-154.27
71.34
7
A
TYR
87
-59.81
99.83
7
A
PHE
94
-143.32
59.51
7
A
GLU
95
-176.74
-75.05
7
A
ARG
97
-119.61
51.92
7
A
ARG
113
-100.26
69.47
7
A
ARG
114
-72.26
-154.37
7
A
ARG
118
-112.10
72.52
7
A
VAL
123
-53.17
98.29
7
A
GLN
142
-68.54
-177.14
7
A
CYS
150
-161.89
34.89
7
A
PRO
152
-88.79
-142.07
7
A
HIS
156
-150.66
-0.22
7
A
ASP
166
50.09
-159.72
7
A
THR
168
-170.28
-4.10
7
A
ASP
182
55.95
90.62
7
A
SER
183
-168.23
-43.35
7
A
GLU
185
-136.27
-42.39
7
A
LEU
187
-131.29
-49.05
7
B
PHE
2
-145.78
-104.61
7
B
SER
3
64.51
131.74
7
B
ASN
4
-109.95
-165.60
7
B
MET
5
-125.94
-137.53
7
B
SER
6
56.55
18.17
7
B
ASP
9
54.46
70.33
8
A
GLN
68
-135.67
-39.59
8
A
SER
78
-69.20
-93.12
8
A
ALA
79
-177.90
30.98
8
A
THR
80
-171.73
100.13
8
A
CYS
81
-121.70
-147.48
8
A
SER
82
52.83
-157.69
8
A
SER
84
-46.77
151.10
8
A
LYS
86
-152.40
71.91
8
A
LEU
88
-70.53
-80.06
8
A
GLU
95
-174.03
-68.37
8
A
SER
96
58.54
19.62
8
A
MET
99
-174.36
-34.00
8
A
ARG
114
-84.77
43.43
8
A
ARG
115
60.49
90.94
8
A
VAL
123
-66.30
94.39
8
A
ASP
126
-166.43
18.90
8
A
THR
135
-142.72
-13.62
8
A
LEU
138
-171.54
128.12
8
A
PRO
152
-54.42
-90.67
8
A
ASP
153
-178.88
-149.52
8
A
HIS
156
-155.05
-38.45
8
A
ASP
166
54.26
-160.05
8
A
THR
168
-168.40
-0.49
8
A
ARG
171
-179.82
-139.54
8
A
ASP
182
57.39
-157.42
8
A
SER
183
72.63
-20.88
8
A
LEU
187
-142.62
-51.48
8
B
PHE
2
-160.08
-164.94
8
B
ASP
9
58.87
71.53
9
A
THR
80
-172.36
84.91
9
A
CYS
81
-111.48
-151.43
9
A
SER
82
55.62
-160.04
9
A
GLU
95
-149.64
-77.37
9
A
GLU
104
-120.34
-59.64
9
A
SER
112
-173.12
-163.96
9
A
ARG
113
72.26
-65.81
9
A
VAL
123
-67.27
90.86
9
A
LEU
138
-165.95
102.34
9
A
PRO
152
-76.10
-94.37
9
A
ASP
153
-175.64
-158.80
9
A
ARG
154
-67.30
-89.61
9
A
ASN
155
-179.41
40.61
9
A
HIS
156
-164.60
-17.21
9
A
ARG
158
58.90
19.26
9
A
ASP
166
51.86
-164.12
9
A
THR
168
-174.05
-0.83
9
A
ARG
171
177.91
176.48
9
A
ASP
182
56.98
82.97
9
A
SER
183
-167.02
-58.11
9
A
GLU
185
-133.88
-54.71
9
B
ASP
9
56.60
78.41
10
A
GLN
68
-164.24
-45.90
10
A
SER
78
-78.93
-91.90
10
A
ALA
79
178.45
34.97
10
A
THR
80
-174.35
101.21
10
A
CYS
81
-122.49
-149.09
10
A
SER
82
54.55
-155.68
10
A
TYR
87
-52.01
99.91
10
A
GLU
95
-155.81
-71.59
10
A
ARG
113
-114.33
66.08
10
A
ARG
114
-63.35
-92.22
10
A
ARG
115
-150.01
75.72
10
A
VAL
123
-67.10
94.22
10
A
ASP
126
-168.89
20.23
10
A
LEU
138
-160.04
116.72
10
A
GLN
142
-77.19
-168.44
10
A
SER
148
-47.60
-73.26
10
A
ALA
151
-170.51
108.53
10
A
ASP
153
54.64
-149.69
10
A
ARG
154
-163.50
-101.57
10
A
ASN
155
49.72
-98.54
10
A
HIS
156
175.71
1.94
10
A
ASP
166
50.35
-152.14
10
A
THR
168
-156.56
-1.15
10
A
ARG
171
178.14
-176.86
10
A
ASP
182
58.00
92.70
10
A
SER
183
-167.08
-36.44
10
B
PHE
2
-108.62
-164.58
10
B
SER
3
-173.81
141.94
10
B
ASP
9
55.03
77.13
11
A
THR
80
-171.37
88.02
11
A
CYS
81
-117.75
-145.45
11
A
SER
82
53.55
-156.67
11
A
PHE
83
-161.81
-167.94
11
A
GLU
95
-163.31
-65.57
11
A
VAL
123
-65.46
95.70
11
A
THR
135
-150.38
-14.76
11
A
PRO
152
-82.86
-136.74
11
A
ASP
166
51.94
-160.01
11
A
THR
168
-172.19
-8.87
11
A
ARG
171
-178.71
-167.41
11
A
ASP
182
57.86
89.94
11
A
SER
183
-156.97
-26.31
11
A
LEU
187
-148.42
-45.95
11
B
ASP
9
56.85
80.68
12
A
SER
78
-78.41
-90.91
12
A
ALA
79
179.28
32.69
12
A
THR
80
-170.26
99.66
12
A
CYS
81
-119.94
-151.53
12
A
SER
82
55.26
-155.06
12
A
PHE
83
-164.32
-167.64
12
A
TYR
87
-58.56
94.89
12
A
PHE
94
-103.04
73.40
12
A
GLU
95
-164.78
-71.12
12
A
ARG
113
36.68
71.56
12
A
ARG
115
58.43
82.87
12
A
VAL
123
-69.31
90.47
12
A
LEU
138
-171.97
113.37
12
A
PHE
149
-174.62
-174.21
12
A
ALA
151
-169.00
115.60
12
A
PRO
152
-79.96
-119.95
12
A
ASP
166
50.38
-158.81
12
A
THR
168
-164.63
6.06
12
A
ASP
182
55.08
83.03
12
A
SER
183
-159.74
-64.01
12
A
GLU
185
-150.35
-33.48
12
A
LEU
187
-137.07
-36.89
12
B
ASP
9
56.98
77.30
13
A
SER
78
-75.61
-91.74
13
A
ALA
79
179.34
38.51
13
A
THR
80
-173.20
95.82
13
A
SER
82
-114.20
-162.84
13
A
SER
84
-47.53
151.52
13
A
TYR
87
-55.45
98.62
13
A
VAL
93
-108.99
-165.48
13
A
PHE
94
-151.95
65.50
13
A
GLU
95
-166.32
-66.85
13
A
ARG
97
-169.57
80.57
13
A
ARG
113
-116.85
71.77
13
A
ARG
115
54.29
88.15
13
A
VAL
123
-62.28
96.15
13
A
ASP
141
-105.09
67.49
13
A
ALA
151
-168.55
119.81
13
A
PRO
152
-69.43
-94.61
13
A
ASN
155
-164.81
-74.87
13
A
HIS
156
176.06
36.81
13
A
ARG
158
37.95
39.52
13
A
ASP
166
55.01
-152.81
13
A
THR
168
-171.25
-0.70
13
A
ARG
171
-179.43
-168.08
13
A
ASP
182
58.14
85.85
13
A
SER
183
-163.86
-39.16
13
B
ASP
9
56.36
78.59
14
A
SER
78
-78.12
-90.25
14
A
ALA
79
176.28
39.01
14
A
THR
80
-173.70
98.00
14
A
SER
82
-159.44
-155.15
14
A
LEU
88
-116.45
62.60
14
A
GLU
95
-169.08
-72.98
14
A
MET
99
60.48
-88.09
14
A
GLN
100
-154.15
-28.25
14
A
VAL
101
49.38
23.46
14
A
ARG
113
-109.66
72.38
14
A
ARG
114
-82.66
40.44
14
A
ARG
115
59.00
77.90
14
A
VAL
123
-58.35
103.39
14
A
THR
135
-151.52
-11.85
14
A
CYS
150
-168.35
25.42
14
A
ASP
153
61.94
65.29
14
A
ARG
165
-74.91
-144.98
14
A
ASP
166
-65.17
-166.33
14
A
THR
168
-166.55
-8.73
14
A
ASP
182
55.97
79.81
14
A
SER
183
-165.90
-59.43
14
A
GLU
185
-141.81
-32.39
14
A
LEU
187
-139.24
-50.27
14
B
PHE
2
-139.99
-91.41
14
B
SER
3
63.84
158.25
14
B
SER
6
-88.09
36.91
14
B
GLU
8
55.69
8.89
14
B
ASP
9
48.90
76.03
15
A
GLN
68
76.25
-56.80
15
A
SER
78
-98.03
-97.11
15
A
ALA
79
-176.47
48.36
15
A
THR
80
-176.04
86.42
15
A
SER
82
-111.97
-156.97
15
A
TYR
87
-62.28
93.87
15
A
GLU
95
-175.77
-70.38
15
A
ARG
113
-115.88
65.25
15
A
ARG
115
55.34
95.04
15
A
ASP
126
-153.51
21.35
15
A
ARG
129
-168.75
115.49
15
A
THR
135
-152.09
-8.18
15
A
GLN
142
-76.55
-167.51
15
A
CYS
150
-162.35
35.58
15
A
PRO
152
-87.68
-89.84
15
A
ASP
153
-167.72
-163.93
15
A
HIS
156
-164.89
-27.42
15
A
ARG
158
56.53
18.94
15
A
ARG
165
-74.01
-152.16
15
A
ASP
166
-55.45
-179.42
15
A
THR
168
-170.08
-5.66
15
A
ARG
171
-175.71
-179.07
15
A
ASP
182
53.84
80.63
15
A
SER
183
-159.42
-43.08
15
A
GLU
185
-146.08
-34.77
15
B
PHE
2
-145.70
-98.81
15
B
SER
3
62.96
157.14
15
B
ASP
9
54.42
70.54
16
A
THR
80
-176.17
85.45
16
A
SER
82
-117.06
-160.66
16
A
GLU
95
-162.18
-65.41
16
A
ARG
97
-149.36
-56.19
16
A
GLN
111
-79.14
-71.72
16
A
SER
112
-175.89
88.11
16
A
ARG
113
-165.17
-62.13
16
A
VAL
123
-58.75
102.31
16
A
LEU
138
-160.59
113.76
16
A
GLN
142
-76.23
-156.78
16
A
PRO
152
-62.30
-88.93
16
A
ARG
154
-145.60
33.04
16
A
ASN
155
-124.00
-87.24
16
A
HIS
156
178.36
3.94
16
A
ARG
165
-68.29
-156.82
16
A
ASP
166
-63.08
-162.16
16
A
THR
168
-155.45
-19.15
16
A
ARG
171
-172.44
-176.71
16
A
PHE
177
-170.29
133.35
16
A
ASP
182
55.51
83.24
16
A
SER
183
-168.99
-42.09
16
A
GLU
185
-145.02
-34.30
16
B
PHE
2
-88.12
-148.93
16
B
ASP
9
57.41
94.67
17
A
SER
78
-72.44
-91.86
17
A
ALA
79
179.84
36.40
17
A
THR
80
-173.77
101.48
17
A
TYR
87
-54.06
96.28
17
A
GLU
95
-149.53
-90.34
17
A
ARG
97
-166.52
47.89
17
A
MET
99
-75.38
-73.70
17
A
GLN
100
-146.57
-24.83
17
A
VAL
101
73.18
-30.40
17
A
SER
112
-177.33
-168.34
17
A
ARG
113
70.61
-69.19
17
A
THR
135
-154.16
-10.39
17
A
GLN
142
-119.47
-165.01
17
A
PRO
152
-70.69
-87.42
17
A
ASN
155
-166.40
-63.57
17
A
HIS
156
178.68
55.23
17
A
GLU
157
-86.30
30.02
17
A
ARG
158
56.17
19.39
17
A
CYS
164
-163.75
110.87
17
A
ARG
165
-72.37
-163.65
17
A
ASP
166
-61.37
-175.05
17
A
THR
168
-167.75
-12.96
17
A
ARG
171
-175.47
-179.68
17
A
ASP
182
57.09
92.76
17
A
SER
183
-169.22
-38.79
17
A
GLU
185
-155.96
-36.33
17
A
SER
188
-57.66
-75.24
17
B
SER
3
62.51
154.02
17
B
ASP
9
54.64
83.89
18
A
SER
78
-78.05
-90.16
18
A
ALA
79
177.05
36.22
18
A
THR
80
-170.41
101.20
18
A
CYS
81
-127.94
-147.35
18
A
SER
82
53.47
-163.06
18
A
LYS
86
-150.69
74.81
18
A
TYR
87
-58.56
97.77
18
A
PHE
94
-150.00
59.81
18
A
GLU
95
-170.06
-77.05
18
A
ARG
113
-110.74
74.92
18
A
ARG
114
-86.87
36.63
18
A
ARG
115
56.16
87.13
18
A
VAL
123
-60.40
93.42
18
A
ASP
126
-155.55
27.61
18
A
ASP
141
-96.36
32.94
18
A
PHE
149
-170.73
146.23
18
A
ALA
151
-167.16
100.82
18
A
PRO
152
-76.25
30.94
18
A
ASP
153
60.40
-93.75
18
A
ARG
165
-100.09
-158.66
18
A
ASP
166
-57.24
-176.85
18
A
THR
168
-163.62
-22.89
18
A
ARG
171
-173.00
-170.03
18
A
ASP
182
62.27
103.68
18
A
SER
183
-163.77
-43.34
18
B
PHE
2
-123.70
-156.36
18
B
ASP
9
56.00
85.33
19
A
THR
80
-177.19
86.95
19
A
SER
82
-103.78
-167.93
19
A
SER
84
-39.00
141.99
19
A
LYS
86
-152.19
70.61
19
A
LEU
88
-79.03
-75.39
19
A
PHE
94
-118.48
59.14
19
A
GLU
95
-154.07
-68.29
19
A
SER
96
56.62
14.99
19
A
ARG
113
32.01
78.79
19
A
ARG
115
56.59
104.94
19
A
VAL
123
-53.00
104.34
19
A
ASP
132
-61.87
-173.89
19
A
ASP
141
-117.27
57.44
19
A
PRO
152
-80.16
-91.00
19
A
ASN
155
-168.14
-65.91
19
A
HIS
156
177.33
39.05
19
A
GLU
157
-67.89
0.36
19
A
ASP
166
-59.95
-175.17
19
A
THR
168
-168.95
-11.39
19
A
ARG
171
-176.12
-173.72
19
A
ASP
182
54.16
75.87
19
A
SER
183
-165.65
-32.50
19
A
GLU
185
-133.29
-31.25
19
A
LEU
187
-128.07
-58.00
19
A
LEU
199
-103.34
47.77
19
B
ASP
9
54.42
72.74
20
A
SER
78
-75.13
-91.76
20
A
ALA
79
179.65
35.29
20
A
THR
80
-173.16
99.78
20
A
CYS
81
-120.73
-150.02
20
A
SER
82
53.77
-157.82
20
A
TYR
87
-57.81
103.12
20
A
GLU
95
-152.42
-76.73
20
A
ARG
114
-67.46
99.80
20
A
ARG
118
-63.31
96.56
20
A
VAL
123
-68.82
89.25
20
A
ASP
126
-163.99
19.71
20
A
ASP
141
-118.14
65.57
20
A
PRO
152
-80.20
-142.15
20
A
ASP
153
-111.81
-153.43
20
A
ASN
155
-157.32
-58.67
20
A
HIS
156
-166.38
37.94
20
A
ASP
166
49.08
29.17
20
A
THR
168
175.75
15.82
20
A
ARG
171
-176.35
-168.43
20
A
ASP
182
57.59
87.64
20
A
SER
183
-162.50
-30.78
20
A
LEU
187
-134.55
-39.94
20
A
GLU
200
-89.66
-74.92
20
B
PHE
2
-104.27
-66.73
20
B
SER
3
51.40
95.37
20
B
ASP
9
57.46
80.85
SOLUTION STRUCTURE OF THE NUMB PTB DOMAIN COMPLEXED TO A NAK PEPTIDE
1
N
N
2
N
N
A
GLN
68
A
GLN
2
HELX_P
A
GLU
73
A
GLU
7
1
1
6
A
GLU
74
A
GLU
8
HELX_P
A
ALA
79
A
ALA
13
1
2
6
A
GLN
100
A
GLN
34
HELX_P
A
SER
112
A
SER
46
1
3
13
A
LEU
187
A
LEU
121
HELX_P
A
LEU
199
A
LEU
133
1
4
13
SIGNALING PROTEIN/TRANSFERASE
COMPLEX, SIGNAL TRANSDUCTION, PHOSPHOTYROSINE BINDING DOMAIN (PTB), ASYMMETRIC CELL DIVISION, SIGNALING PROTEIN-TRANSFERASE COMPLEX
NUMB_DROME
UNP
1
P16554
1DDM
PDB
2
1DDM
67
201
1DDM
67
201
P16554
A
1
1
135
1
11
1DDM
1
11
1DDM
B
2
1
11
3
4
anti-parallel
anti-parallel
anti-parallel
anti-parallel
anti-parallel
A
SER
84
A
SER
18
A
LYS
86
A
LYS
20
A
ARG
118
A
ARG
52
A
LEU
121
A
LEU
55
A
VAL
130
A
VAL
64
A
ASP
132
A
ASP
66
A
GLY
89
A
GLY
23
A
GLU
92
A
GLU
26
A
MET
173
A
MET
107
A
LEU
178
A
LEU
112
A
GLY
159
A
GLY
93
A
CYS
164
A
CYS
98
A
PHE
149
A
PHE
83
A
ALA
151
A
ALA
85
1
P 1