0.020024 0.011561 0.000000 0.000000 0.023122 0.000000 0.000000 0.000000 0.012359 0.00000 0.00000 0.00000 Beneken, J. Tu, J.C. Xiao, B. Worley, P.F. Leahy, D.J. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 6 90 90 120 49.94 49.94 80.91 C3 H7 N O2 89.093 y ALANINE L-peptide linking C6 H15 N4 O2 1 175.209 y ARGININE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking C5 H10 N2 O3 146.144 y GLUTAMINE L-peptide linking C5 H9 N O4 147.129 y GLUTAMIC ACID L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H10 N3 O2 1 156.162 y HISTIDINE L-peptide linking H2 O 18.015 WATER non-polymer C6 H13 N O2 131.173 y ISOLEUCINE L-peptide linking C6 H13 N O2 131.173 y LEUCINE L-peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H11 N O2 Se 196.106 n SELENOMETHIONINE L-peptide linking C9 H11 N O2 165.189 y PHENYLALANINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking C11 H12 N2 O2 204.225 y TRYPTOPHAN L-peptide linking C9 H11 N O3 181.189 y TYROSINE L-peptide linking C5 H11 N O2 117.146 y VALINE L-peptide linking US Neuron NERNET 2038 0896-6273 26 143 154 10.1016/S0896-6273(00)81145-9 10798399 Structure of the Homer EVH1 domain-peptide complex reveals a new twist in polyproline recognition. 2000 US Neuron NERNET 2038 0896-6273 21 717 726 10.1016/S0896-6273(00)80589-9 Homer binds a novel proline-rich motif and links group 1 metabotropic glutamate receptors with IP3 receptors 1998 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 93 1 93 1 93 1 93 1 IMAGE PLATE 1998-10-30 RIGAKU RAXIS IV IMAGE PLATE 1998-10-30 RIGAKU RAXIS IV IMAGE PLATE 1998-10-30 RIGAKU RAXIS IV IMAGE PLATE 1998-10-30 RIGAKU RAXIS IV MAD M x-ray 1 0.9879 1.0 0.9793 1.0 0.9790 1.0 0.9611 1.0 X4A NSLS 0.9879 SYNCHROTRON NSLS BEAMLINE X4A X4A NSLS 0.9793 SYNCHROTRON NSLS BEAMLINE X4A X4A NSLS 0.9790 SYNCHROTRON NSLS BEAMLINE X4A X4A NSLS 0.9611 SYNCHROTRON NSLS BEAMLINE X4A 13827.220 GLGF-DOMAIN PROTEIN HOMER HOMER EVH1 DOMAIN RESIDUES 1-120 NONE 1 man polymer 18.015 water 88 nat water no yes (MSE)GEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDGSKAIINSTITPN(MSE)TFTKTSQ KFGQWADSRANTVYGLGFSSEHHLSKFAEKFQEFKEAARLAKEKSQEK MGEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDGSKAIINSTITPNMTFTKTSQKFGQWADS RANTVYGLGFSSEHHLSKFAEKFQEFKEAARLAKEKSQEK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n Norway rat Rattus eubacteria sample 10116 BRAIN Rattus norvegicus 2 Bacteria PLASMID PGEX 1 2.11 41.59 VAPOR DIFFUSION, HANGING DROP 7.4 PEG 3350, Magnesium sulfate, Hepes, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K 293 software repository Initial release Version format compliance Version format compliance Refinement description 1 0 2000-05-10 1 1 2008-04-27 1 2 2011-07-13 1 3 2017-10-04 CRYSTAL STRUCTURE OF THE HOMER EVH1 DOMAIN WITH BOUND MGLUR PEPTIDE RCSB Y RCSB 1999-11-11 REL REL HOH water TIP 301 2 HOH HOH 301 A TIP 302 2 HOH HOH 302 A TIP 303 2 HOH HOH 303 A TIP 304 2 HOH HOH 304 A TIP 305 2 HOH HOH 305 A TIP 306 2 HOH HOH 306 A TIP 307 2 HOH HOH 307 A TIP 308 2 HOH HOH 308 A TIP 309 2 HOH HOH 309 A TIP 310 2 HOH HOH 310 A TIP 311 2 HOH HOH 311 A TIP 312 2 HOH HOH 312 A TIP 313 2 HOH HOH 313 A TIP 314 2 HOH HOH 314 A TIP 315 2 HOH HOH 315 A TIP 316 2 HOH HOH 316 A TIP 317 2 HOH HOH 317 A TIP 318 2 HOH HOH 318 A TIP 319 2 HOH HOH 319 A TIP 320 2 HOH HOH 320 A TIP 321 2 HOH HOH 321 A TIP 323 2 HOH HOH 323 A TIP 324 2 HOH HOH 324 A TIP 325 2 HOH HOH 325 A TIP 326 2 HOH HOH 326 A TIP 327 2 HOH HOH 327 A TIP 328 2 HOH HOH 328 A TIP 329 2 HOH HOH 329 A TIP 330 2 HOH HOH 330 A TIP 331 2 HOH HOH 331 A TIP 332 2 HOH HOH 332 A TIP 333 2 HOH HOH 333 A TIP 334 2 HOH HOH 334 A TIP 335 2 HOH HOH 335 A TIP 336 2 HOH HOH 336 A TIP 337 2 HOH HOH 337 A TIP 338 2 HOH HOH 338 A TIP 339 2 HOH HOH 339 A TIP 340 2 HOH HOH 340 A TIP 341 2 HOH HOH 341 A TIP 344 2 HOH HOH 344 A TIP 345 2 HOH HOH 345 A TIP 346 2 HOH HOH 346 A TIP 347 2 HOH HOH 347 A TIP 348 2 HOH HOH 348 A TIP 349 2 HOH HOH 349 A TIP 350 2 HOH HOH 350 A TIP 351 2 HOH HOH 351 A TIP 352 2 HOH HOH 352 A TIP 353 2 HOH HOH 353 A TIP 354 2 HOH HOH 354 A TIP 355 2 HOH HOH 355 A TIP 356 2 HOH HOH 356 A TIP 357 2 HOH HOH 357 A TIP 358 2 HOH HOH 358 A TIP 359 2 HOH HOH 359 A TIP 361 2 HOH HOH 361 A TIP 363 2 HOH HOH 363 A TIP 364 2 HOH HOH 364 A TIP 365 2 HOH HOH 365 A TIP 367 2 HOH HOH 367 A TIP 368 2 HOH HOH 368 A TIP 371 2 HOH HOH 371 A TIP 372 2 HOH HOH 372 A TIP 373 2 HOH HOH 373 A TIP 375 2 HOH HOH 375 A TIP 376 2 HOH HOH 376 A TIP 377 2 HOH HOH 377 A TIP 378 2 HOH HOH 378 A TIP 379 2 HOH HOH 379 A TIP 380 2 HOH HOH 380 A TIP 382 2 HOH HOH 382 A TIP 383 2 HOH HOH 383 A TIP 385 2 HOH HOH 385 A TIP 386 2 HOH HOH 386 A TIP 387 2 HOH HOH 387 A TIP 388 2 HOH HOH 388 A TIP 389 2 HOH HOH 389 A TIP 391 2 HOH HOH 391 A TIP 393 2 HOH HOH 393 A TIP 394 2 HOH HOH 394 A TIP 395 2 HOH HOH 395 A TIP 396 2 HOH HOH 396 A TIP 397 2 HOH HOH 397 A TIP 398 2 HOH HOH 398 A TIP 399 2 HOH HOH 399 A TIP 400 2 HOH HOH 400 A TIP 401 2 HOH HOH 401 A MSE 1 n 1 MSE 1 A GLY 2 n 2 GLY 2 A GLU 3 n 3 GLU 3 A GLN 4 n 4 GLN 4 A PRO 5 n 5 PRO 5 A ILE 6 n 6 ILE 6 A PHE 7 n 7 PHE 7 A SER 8 n 8 SER 8 A THR 9 n 9 THR 9 A ARG 10 n 10 ARG 10 A ALA 11 n 11 ALA 11 A HIS 12 n 12 HIS 12 A VAL 13 n 13 VAL 13 A PHE 14 n 14 PHE 14 A GLN 15 n 15 GLN 15 A ILE 16 n 16 ILE 16 A ASP 17 n 17 ASP 17 A PRO 18 n 18 PRO 18 A ASN 19 n 19 ASN 19 A THR 20 n 20 THR 20 A LYS 21 n 21 LYS 21 A LYS 22 n 22 LYS 22 A ASN 23 n 23 ASN 23 A TRP 24 n 24 TRP 24 A VAL 25 n 25 VAL 25 A PRO 26 n 26 PRO 26 A THR 27 n 27 THR 27 A SER 28 n 28 SER 28 A LYS 29 n 29 LYS 29 A HIS 30 n 30 HIS 30 A ALA 31 n 31 ALA 31 A VAL 32 n 32 VAL 32 A THR 33 n 33 THR 33 A VAL 34 n 34 VAL 34 A SER 35 n 35 SER 35 A TYR 36 n 36 TYR 36 A PHE 37 n 37 PHE 37 A TYR 38 n 38 TYR 38 A ASP 39 n 39 ASP 39 A SER 40 n 40 SER 40 A THR 41 n 41 THR 41 A ARG 42 n 42 ARG 42 A ASN 43 n 43 ASN 43 A VAL 44 n 44 VAL 44 A TYR 45 n 45 TYR 45 A ARG 46 n 46 ARG 46 A ILE 47 n 47 ILE 47 A ILE 48 n 48 ILE 48 A SER 49 n 49 SER 49 A LEU 50 n 50 LEU 50 A ASP 51 n 51 ASP 51 A GLY 52 n 52 GLY 52 A SER 53 n 53 SER 53 A LYS 54 n 54 LYS 54 A ALA 55 n 55 ALA 55 A ILE 56 n 56 ILE 56 A ILE 57 n 57 ILE 57 A ASN 58 n 58 ASN 58 A SER 59 n 59 SER 59 A THR 60 n 60 THR 60 A ILE 61 n 61 ILE 61 A THR 62 n 62 THR 62 A PRO 63 n 63 PRO 63 A ASN 64 n 64 ASN 64 A MSE 65 n 65 MSE 65 A THR 66 n 66 THR 66 A PHE 67 n 67 PHE 67 A THR 68 n 68 THR 68 A LYS 69 n 69 LYS 69 A THR 70 n 70 THR 70 A SER 71 n 71 SER 71 A GLN 72 n 72 GLN 72 A LYS 73 n 73 LYS 73 A PHE 74 n 74 PHE 74 A GLY 75 n 75 GLY 75 A GLN 76 n 76 GLN 76 A TRP 77 n 77 TRP 77 A ALA 78 n 78 ALA 78 A ASP 79 n 79 ASP 79 A SER 80 n 80 SER 80 A ARG 81 n 81 ARG 81 A ALA 82 n 82 ALA 82 A ASN 83 n 83 ASN 83 A THR 84 n 84 THR 84 A VAL 85 n 85 VAL 85 A TYR 86 n 86 TYR 86 A GLY 87 n 87 GLY 87 A LEU 88 n 88 LEU 88 A GLY 89 n 89 GLY 89 A PHE 90 n 90 PHE 90 A SER 91 n 91 SER 91 A SER 92 n 92 SER 92 A GLU 93 n 93 GLU 93 A HIS 94 n 94 HIS 94 A HIS 95 n 95 HIS 95 A LEU 96 n 96 LEU 96 A SER 97 n 97 SER 97 A LYS 98 n 98 LYS 98 A PHE 99 n 99 PHE 99 A ALA 100 n 100 ALA 100 A GLU 101 n 101 GLU 101 A LYS 102 n 102 LYS 102 A PHE 103 n 103 PHE 103 A GLN 104 n 104 GLN 104 A GLU 105 n 105 GLU 105 A PHE 106 n 106 PHE 106 A LYS 107 n 107 LYS 107 A GLU 108 n 108 GLU 108 A ALA 109 n 109 ALA 109 A ALA 110 n 110 ALA 110 A ARG 111 n 111 ARG 111 A n 112 112 A n 113 113 A n 114 114 A n 115 115 A n 116 116 A n 117 117 A n 118 118 A n 119 119 A n 120 120 A author_defined_assembly 1 monomeric A MSE 1 SELENOMETHIONINE A MSE 1 MET A MSE 65 SELENOMETHIONINE A MSE 65 MET 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 A O SER 59 A O SER 59 A N ILE 47 A N ILE 47 A N LEU 50 A N LEU 50 A O THR 33 A O THR 33 A O TYR 38 A O TYR 38 A N GLN 4 A N GLN 4 A O GLN 15 A O GLN 15 A N VAL 25 A N VAL 25 A O SER 59 A O SER 59 A N ILE 47 A N ILE 47 A N LEU 50 A N LEU 50 A O THR 33 A O THR 33 A O TYR 38 A O TYR 38 A N GLN 4 A N GLN 4 A N ILE 16 A N ILE 16 A O VAL 85 A O VAL 85 A N LEU 88 A N LEU 88 A O GLY 75 A O GLY 75 A O GLN 76 A O GLN 76 A N THR 68 A N THR 68 1 A LEU 112 A LEU 112 1 Y 1 A ALA 113 A ALA 113 1 Y 1 A LYS 114 A LYS 114 1 Y 1 A GLU 115 A GLU 115 1 Y 1 A LYS 116 A LYS 116 1 Y 1 A SER 117 A SER 117 1 Y 1 A GLN 118 A GLN 118 1 Y 1 A GLU 119 A GLU 119 1 Y 1 A LYS 120 A LYS 120 1 Y 1 A A O O HOH HOH 394 394 2.05 1_555 6_555 1 A ASN 58 -151.37 67.13 0.285 0.245 0.245 1.70 30.00 1313 13357 12725 RANDOM 1 0.000 0.0 ENGH AND HUBER 1.70 30.00 88 984 0 0 896 0.0126 1.745 1.7 30.0 1DDW 13342 12725 0.0 0.0 0.0870000 1 21.0 4.8 99.9 0.2860000 1.70 1.78 2.34 77.0 phasing SOLVE refinement CNS data scaling SCALEPACK GLGF-DOMAIN PROTEIN HOMER HOMER EVH1 DOMAIN UNLIGANDED 1 N N 2 N N A SER 92 A SER 92 HELX_P A ARG 111 A ARG 111 1 1 20 covale 1.328 A MSE 1 A C MSE 1 1_555 A GLY 2 A N GLY 2 1_555 covale 1.331 A ASN 64 A C ASN 64 1_555 A MSE 65 A N MSE 65 1_555 covale 1.327 A MSE 65 A C MSE 65 1_555 A THR 66 A N THR 66 1_555 SIGNALING PROTEIN PLECKSTRIN HOMOLOGY DOMAIN FOLD, SIGNALING PROTEIN HOME1_RAT UNP 1 Q9Z214 4 123 1DDW 1 120 Q9Z214 A 1 1 120 1 MET MODIFIED RESIDUE MSE 1 1DDW A Q9Z214 UNP 4 1 1 MET MODIFIED RESIDUE MSE 65 1DDW A Q9Z214 UNP 68 65 5 7 anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel anti-parallel A LYS 54 A LYS 54 A THR 60 A THR 60 A VAL 44 A VAL 44 A ASP 51 A ASP 51 A VAL 32 A VAL 32 A ASP 39 A ASP 39 A GLU 3 A GLU 3 A ILE 16 A ILE 16 A TRP 24 A TRP 24 A PRO 26 A PRO 26 A LYS 54 A LYS 54 A THR 60 A THR 60 A VAL 44 A VAL 44 A ASP 51 A ASP 51 A VAL 32 A VAL 32 A ASP 39 A ASP 39 A GLU 3 A GLU 3 A ILE 16 A ILE 16 A THR 84 A THR 84 A GLY 89 A GLY 89 A PHE 74 A PHE 74 A ASP 79 A ASP 79 A THR 68 A THR 68 A LYS 69 A LYS 69 154 P 32 2 1