1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 Zangger, K. Oz, G. Otvos, J.D. Armitage, I.M. http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 1 90.00 90.00 90.00 1.000 1.000 1.000 C3 H7 N O2 89.093 y ALANINE L-peptide linking C4 H8 N2 O3 132.118 y ASPARAGINE L-peptide linking C4 H7 N O4 133.103 y ASPARTIC ACID L-peptide linking Cd 2 112.411 CADMIUM ION non-polymer C3 H7 N O2 S 121.158 y CYSTEINE L-peptide linking C2 H5 N O2 75.067 y GLYCINE peptide linking C6 H15 N2 O2 1 147.195 y LYSINE L-peptide linking C5 H11 N O2 S 149.211 y METHIONINE L-peptide linking C5 H9 N O2 115.130 y PROLINE L-peptide linking C3 H7 N O3 105.093 y SERINE L-peptide linking C4 H9 N O3 119.119 y THREONINE L-peptide linking US Protein Sci. PRCIEI 0795 0961-8368 8 2630 2638 10631978 Three-dimensional solution structure of mouse [Cd7]-metallothionein-1 by homonuclear and heteronuclear NMR spectroscopy. 1999 10.2210/pdb1dft/pdb pdb_00001dft 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.00000 0.00000 0.00000 3017.507 METALLOTHIONEIN-1 N-TERMINAL DOMAIN (BETA) 1 man polymer 112.411 CADMIUM ION 3 syn non-polymer no no MDPNCSCSTGGSCTCTSSCACKNCKCTSCK MDPNCSCSTGGSCTCTSSCACKNCKCTSCK A polypeptide(L) n n n n n n n n n n n n n n n n n n n n n n n n n n n n n n house mouse Mus Escherichia sample 10090 Mus musculus 562 Escherichia coli PLASMID PET3D database_2 pdbx_struct_assembly pdbx_struct_conn_angle pdbx_struct_oper_list struct_conn struct_site repository Initial release Version format compliance Version format compliance Database references Derived calculations 1 0 1999-12-01 1 1 2008-04-27 1 2 2011-07-13 1 3 2022-02-16 _database_2.pdbx_DOI _database_2.pdbx_database_accession _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.value _struct_conn.pdbx_dist_value _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id 1DFS CONTAINS THE ALPHA-DOMAIN OF MOUSE METALLOTHIONEIN-1 RCSB Y RCSB 1999-11-20 REL REL CD CADMIUM ION THIS STRUCTURE WAS DETERMINED USING STANDARD 2D HOMONUCLEAR TECHNIQUES AND AN ACCORDION CD-H HSQC MINIMIZED AVERAGE STRUCTURE 50 1 2D NOESY 2D TOCSY ACCORDION CD-H HSQC 15mMKPI 6.5 AMBIENT 283 K 15mMKPI 6.5 AMBIENT 298 K A TOTAL OF 103 NOE-DERIVED DISTANCE CONSTRAINTS AND 12 CD-S CONNECTIVITIES HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING minimized average structure 0.7MM MOUSE METALLOTHIONEIN-1, NATURAL ABUNDANCE, 15MM PHOSPHATE BUFFER NA VARIAN data analysis VNMR 6.1A BRUNGER structure solution X-PLOR 3.851 BRUNGER refinement X-PLOR 3.851 800 Varian UNITY INOVA 600 Varian UNITY INOVA KDS 31 2 CD CD 31 A KDS 31 2 CD CD 32 A KDS 31 2 CD CD 33 A MET 1 n 1 MET 1 A ASP 2 n 2 ASP 2 A PRO 3 n 3 PRO 3 A ASN 4 n 4 ASN 4 A CYS 5 n 5 CYS 5 A SER 6 n 6 SER 6 A CYS 7 n 7 CYS 7 A SER 8 n 8 SER 8 A THR 9 n 9 THR 9 A GLY 10 n 10 GLY 10 A GLY 11 n 11 GLY 11 A SER 12 n 12 SER 12 A CYS 13 n 13 CYS 13 A THR 14 n 14 THR 14 A CYS 15 n 15 CYS 15 A THR 16 n 16 THR 16 A SER 17 n 17 SER 17 A SER 18 n 18 SER 18 A CYS 19 n 19 CYS 19 A ALA 20 n 20 ALA 20 A CYS 21 n 21 CYS 21 A LYS 22 n 22 LYS 22 A ASN 23 n 23 ASN 23 A CYS 24 n 24 CYS 24 A LYS 25 n 25 LYS 25 A CYS 26 n 26 CYS 26 A THR 27 n 27 THR 27 A SER 28 n 28 SER 28 A CYS 29 n 29 CYS 29 A LYS 30 n 30 LYS 30 A author_defined_assembly 1 monomeric A CYS 5 A SG CYS 5 1_555 A CD 32 C CD CD 1_555 A CYS 7 A SG CYS 7 1_555 104.4 A CYS 5 A SG CYS 5 1_555 A CD 32 C CD CD 1_555 A CYS 21 A SG CYS 21 1_555 123.6 A CYS 7 A SG CYS 7 1_555 A CD 32 C CD CD 1_555 A CYS 21 A SG CYS 21 1_555 106.5 A CYS 5 A SG CYS 5 1_555 A CD 32 C CD CD 1_555 A CYS 24 A SG CYS 24 1_555 101.1 A CYS 7 A SG CYS 7 1_555 A CD 32 C CD CD 1_555 A CYS 24 A SG CYS 24 1_555 123.3 A CYS 21 A SG CYS 21 1_555 A CD 32 C CD CD 1_555 A CYS 24 A SG CYS 24 1_555 99.6 A CYS 7 A SG CYS 7 1_555 A CD 33 D CD CD 1_555 A CYS 13 A SG CYS 13 1_555 107.5 A CYS 7 A SG CYS 7 1_555 A CD 33 D CD CD 1_555 A CYS 15 A SG CYS 15 1_555 110.4 A CYS 13 A SG CYS 13 1_555 A CD 33 D CD CD 1_555 A CYS 15 A SG CYS 15 1_555 121.2 A CYS 7 A SG CYS 7 1_555 A CD 33 D CD CD 1_555 A CYS 26 A SG CYS 26 1_555 120.2 A CYS 13 A SG CYS 13 1_555 A CD 33 D CD CD 1_555 A CYS 26 A SG CYS 26 1_555 89.2 A CYS 15 A SG CYS 15 1_555 A CD 33 D CD CD 1_555 A CYS 26 A SG CYS 26 1_555 107.8 A CYS 15 A SG CYS 15 1_555 A CD 31 B CD CD 1_555 A CYS 19 A SG CYS 19 1_555 108.6 A CYS 15 A SG CYS 15 1_555 A CD 31 B CD CD 1_555 A CYS 24 A SG CYS 24 1_555 120.2 A CYS 19 A SG CYS 19 1_555 A CD 31 B CD CD 1_555 A CYS 24 A SG CYS 24 1_555 95.5 A CYS 15 A SG CYS 15 1_555 A CD 31 B CD CD 1_555 A CYS 29 A SG CYS 29 1_555 112.8 A CYS 19 A SG CYS 19 1_555 A CD 31 B CD CD 1_555 A CYS 29 A SG CYS 29 1_555 111.8 A CYS 24 A SG CYS 24 1_555 A CD 31 B CD CD 1_555 A CYS 29 A SG CYS 29 1_555 106.8 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 1_555 x,y,z identity operation 0.0000000000 0.0000000000 0.0000000000 1 9.92 1.10 114.20 124.12 A A A CA CB SG CYS CYS CYS 5 5 5 N 1 7.41 1.10 114.20 121.61 A A A CA CB SG CYS CYS CYS 21 21 21 N 1 8.05 1.10 114.20 122.25 A A A CA CB SG CYS CYS CYS 24 24 24 N 1 A A N CA MET MET 1 1 0.155 0.020 1.459 1.614 N 1 A A CA CB MET MET 1 1 0.180 0.022 1.535 1.715 N 1 A A N CA ASP ASP 2 2 0.161 0.020 1.459 1.620 N 1 A A CA C ASP ASP 2 2 0.166 0.026 1.525 1.691 N 1 A A C N ASP PRO 2 3 0.166 0.019 1.338 1.504 Y 1 A A N CA PRO PRO 3 3 0.137 0.017 1.468 1.605 N 1 A A CA C PRO PRO 3 3 0.156 0.020 1.524 1.680 N 1 A A N CA ASN ASN 4 4 0.151 0.020 1.459 1.610 N 1 A A C N ASN CYS 4 5 0.148 0.023 1.336 1.484 Y 1 A A N CA CYS CYS 5 5 0.169 0.020 1.459 1.628 N 1 A A CA CB CYS CYS 5 5 0.139 0.022 1.535 1.674 N 1 A A N CA SER SER 6 6 0.160 0.020 1.459 1.619 N 1 A A CA CB SER SER 6 6 0.109 0.015 1.525 1.634 N 1 A A CA C SER SER 6 6 0.171 0.026 1.525 1.696 N 1 A A N CA CYS CYS 7 7 0.199 0.020 1.459 1.658 N 1 A A CA CB CYS CYS 7 7 0.156 0.022 1.535 1.691 N 1 A A CA C CYS CYS 7 7 0.163 0.026 1.525 1.688 N 1 A A N CA SER SER 8 8 0.201 0.020 1.459 1.660 N 1 A A CA CB SER SER 8 8 0.124 0.015 1.525 1.649 N 1 A A CA C SER SER 8 8 0.158 0.026 1.525 1.683 N 1 A A C N SER THR 8 9 0.152 0.023 1.336 1.488 Y 1 A A N CA THR THR 9 9 0.197 0.020 1.459 1.656 N 1 A A CA CB THR THR 9 9 0.182 0.026 1.529 1.711 N 1 A A N CA GLY GLY 10 10 0.149 0.015 1.456 1.605 N 1 A A CA C GLY GLY 10 10 0.123 0.016 1.514 1.637 N 1 A A N CA GLY GLY 11 11 0.125 0.015 1.456 1.581 N 1 A A CA C GLY GLY 11 11 0.098 0.016 1.514 1.612 N 1 A A N CA SER SER 12 12 0.175 0.020 1.459 1.634 N 1 A A CA CB SER SER 12 12 0.121 0.015 1.525 1.646 N 1 A A N CA CYS CYS 13 13 0.181 0.020 1.459 1.640 N 1 A A CA C CYS CYS 13 13 0.160 0.026 1.525 1.685 N 1 A A N CA THR THR 14 14 0.160 0.020 1.459 1.619 N 1 A A CA CB THR THR 14 14 0.203 0.026 1.529 1.732 N 1 A A C N THR CYS 14 15 0.148 0.023 1.336 1.484 Y 1 A A N CA CYS CYS 15 15 0.204 0.020 1.459 1.663 N 1 A A CA CB CYS CYS 15 15 0.162 0.022 1.535 1.697 N 1 A A CA C CYS CYS 15 15 0.167 0.026 1.525 1.692 N 1 A A N CA THR THR 16 16 0.185 0.020 1.459 1.644 N 1 A A CA CB THR THR 16 16 0.176 0.026 1.529 1.705 N 1 A A N CA SER SER 17 17 0.181 0.020 1.459 1.640 N 1 A A CA CB SER SER 17 17 0.120 0.015 1.525 1.645 N 1 A A N CA SER SER 18 18 0.162 0.020 1.459 1.621 N 1 A A CA CB SER SER 18 18 0.111 0.015 1.525 1.636 N 1 A A N CA CYS CYS 19 19 0.175 0.020 1.459 1.634 N 1 A A CA CB CYS CYS 19 19 0.150 0.022 1.535 1.685 N 1 A A N CA ALA ALA 20 20 0.166 0.020 1.459 1.625 N 1 A A N CA CYS CYS 21 21 0.165 0.020 1.459 1.624 N 1 A A CA C CYS CYS 21 21 0.182 0.026 1.525 1.707 N 1 A A N CA LYS LYS 22 22 0.149 0.020 1.459 1.608 N 1 A A CA C LYS LYS 22 22 0.161 0.026 1.525 1.686 N 1 A A N CA ASN ASN 23 23 0.156 0.020 1.459 1.615 N 1 A A CA C ASN ASN 23 23 0.162 0.026 1.525 1.687 N 1 A A N CA CYS CYS 24 24 0.199 0.020 1.459 1.658 N 1 A A CA CB CYS CYS 24 24 0.163 0.022 1.535 1.698 N 1 A A N CA LYS LYS 25 25 0.166 0.020 1.459 1.625 N 1 A A CA CB LYS LYS 25 25 0.151 0.022 1.535 1.686 N 1 A A CA C LYS LYS 25 25 0.165 0.026 1.525 1.690 N 1 A A N CA CYS CYS 26 26 0.179 0.020 1.459 1.638 N 1 A A CA CB CYS CYS 26 26 0.148 0.022 1.535 1.683 N 1 A A C N CYS THR 26 27 0.143 0.023 1.336 1.479 Y 1 A A N CA THR THR 27 27 0.183 0.020 1.459 1.642 N 1 A A CA CB THR THR 27 27 0.172 0.026 1.529 1.701 N 1 A A N CA SER SER 28 28 0.188 0.020 1.459 1.647 N 1 A A CA CB SER SER 28 28 0.119 0.015 1.525 1.644 N 1 A A N CA CYS CYS 29 29 0.172 0.020 1.459 1.631 N 1 A A CA CB CYS CYS 29 29 0.151 0.022 1.535 1.686 N 1 A A N CA LYS LYS 30 30 0.190 0.020 1.459 1.649 N 1 A A CA CB LYS LYS 30 30 0.142 0.022 1.535 1.677 N 1 A SER 8 113.65 -137.80 1 A THR 9 -150.44 -42.41 1 A THR 14 86.76 -92.43 1 A CYS 15 59.75 70.99 1 A THR 16 -104.36 -112.18 1 A CYS 21 -123.09 -126.29 1 A LYS 22 -132.86 -62.44 1 A ASN 23 -133.68 -61.84 1 A CYS 24 83.42 151.12 1 A LYS 25 -105.86 66.71 1 A CYS 26 -116.27 -120.45 1 A THR 27 -103.04 -82.39 minimized average SOLUTION STRUCTURE OF THE BETA-DOMAIN OF MOUSE METALLOTHIONEIN-1 1 N N 2 N N 2 N N 2 N N metalc 2.566 A CYS 5 A SG CYS 5 1_555 A CD 32 C CD CD 1_555 metalc 2.545 A CYS 7 A SG CYS 7 1_555 A CD 32 C CD CD 1_555 metalc 2.551 A CYS 7 A SG CYS 7 1_555 A CD 33 D CD CD 1_555 metalc 2.543 A CYS 13 A SG CYS 13 1_555 A CD 33 D CD CD 1_555 metalc 2.564 A CYS 15 A SG CYS 15 1_555 A CD 31 B CD CD 1_555 metalc 2.550 A CYS 15 A SG CYS 15 1_555 A CD 33 D CD CD 1_555 metalc 2.540 A CYS 19 A SG CYS 19 1_555 A CD 31 B CD CD 1_555 metalc 2.577 A CYS 21 A SG CYS 21 1_555 A CD 32 C CD CD 1_555 metalc 2.541 A CYS 24 A SG CYS 24 1_555 A CD 31 B CD CD 1_555 metalc 2.543 A CYS 24 A SG CYS 24 1_555 A CD 32 C CD CD 1_555 metalc 2.531 A CYS 26 A SG CYS 26 1_555 A CD 33 D CD CD 1_555 metalc 2.555 A CYS 29 A SG CYS 29 1_555 A CD 31 B CD CD 1_555 METAL BINDING PROTEIN HALF TURN, CD-S CLUSTER, METAL BINDING PROTEIN MT1_MOUSE UNP 1 P02802 1 30 1DFT 1 30 P02802 A 1 1 30 BINDING SITE FOR RESIDUE CD A 31 A CD 31 Software 4 BINDING SITE FOR RESIDUE CD A 32 A CD 32 Software 4 BINDING SITE FOR RESIDUE CD A 33 A CD 33 Software 4 A CYS 15 A CYS 15 4 1_555 A CYS 19 A CYS 19 4 1_555 A CYS 24 A CYS 24 4 1_555 A CYS 29 A CYS 29 4 1_555 A CYS 5 A CYS 5 4 1_555 A CYS 7 A CYS 7 4 1_555 A CYS 21 A CYS 21 4 1_555 A CYS 24 A CYS 24 4 1_555 A CYS 7 A CYS 7 4 1_555 A CYS 13 A CYS 13 4 1_555 A CYS 15 A CYS 15 4 1_555 A CYS 26 A CYS 26 4 1_555 1 P 1